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Name: GOLSYN Sequence: fasta or formatted (660aa) NCBI GI: 153090207
Description:

Golgi-localized syntaphilin-related protein isoform c

Referenced in:

Synapses

Other entries for this name:
alt prot [662aa] Golgi-localized syntaphilin-related protein isoform b
alt prot [662aa] Golgi-localized syntaphilin-related protein isoform b
alt prot [663aa] Golgi-localized syntaphilin-related protein isoform a
alt prot [663aa] Golgi-localized syntaphilin-related protein isoform a
alt prot [544aa] Golgi-localized syntaphilin-related protein isoform d
alt prot [662aa] Golgi-localized syntaphilin-related protein isoform b
alt prot [544aa] Golgi-localized syntaphilin-related protein isoform d
alt prot [663aa] Golgi-localized syntaphilin-related protein isoform a
alt prot [663aa] Golgi-localized syntaphilin-related protein isoform a
alt prot [663aa] Golgi-localized syntaphilin-related protein isoform a
alt prot [662aa] Golgi-localized syntaphilin-related protein isoform b
alt prot [662aa] Golgi-localized syntaphilin-related protein isoform b
alt prot [663aa] Golgi-localized syntaphilin-related protein isoform a
alt prot [544aa] Golgi-localized syntaphilin-related protein isoform d
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6         37           2
 C cysteine            2.1         14           2
 D aspartate           4.8         32           2
 E glutamate           8.5         56           3
 F phenylalanine       2.3         15           1
 G glycine             5.9         39           2
 H histidine           2.6         17           2
 I isoleucine          3.8         25           1
 K lysine              4.7         31           2
 L leucine             8.8         58           2
 M methionine          2.3         15           1
 N asparagine          3.2         21           1
 P proline             7.1         47           2
 Q glutamine           3.8         25           3
 R arginine            6.5         43           2
 S serine             14.8         98           5
 T threonine           4.2         28           3
 V valine              7.0         46           3
 W tryptophan          0.5          3           1
 Y tyrosine            1.5         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Golgi-localized syntaphilin-related protein isoform... 
GOLSYN                0.992   Golgi-localized syntaphilin-related protein isoform...
GOLSYN                0.992   Golgi-localized syntaphilin-related protein isoform...
GOLSYN                0.992   Golgi-localized syntaphilin-related protein isoform...
GOLSYN                0.992   Golgi-localized syntaphilin-related protein isoform...
GOLSYN                0.992   Golgi-localized syntaphilin-related protein isoform...
GOLSYN                0.992   Golgi-localized syntaphilin-related protein isoform...
GOLSYN                0.992   Golgi-localized syntaphilin-related protein isoform...
GOLSYN                0.992   Golgi-localized syntaphilin-related protein isoform...
GOLSYN                0.992   Golgi-localized syntaphilin-related protein isoform...
GOLSYN                0.992   Golgi-localized syntaphilin-related protein isoform...
GOLSYN                0.992   Golgi-localized syntaphilin-related protein isoform...
GOLSYN                0.814   Golgi-localized syntaphilin-related protein isoform...
GOLSYN                0.814   Golgi-localized syntaphilin-related protein isoform...
GOLSYN                0.814   Golgi-localized syntaphilin-related protein isoform...
SNPH                  0.247   syntaphilin 
HRNR                  0.021   hornerin 
C6orf174              0.019   hypothetical protein LOC387104 
SRRM2                 0.018   splicing coactivator subunit SRm300 
MAPK8IP2              0.018   mitogen-activated protein kinase 8 interacting protei...
MAPK8IP2              0.018   mitogen-activated protein kinase 8 interacting protei...
MYH9                  0.017   myosin, heavy polypeptide 9, non-muscle 
EPS15                 0.017   epidermal growth factor receptor pathway substrate ...
EPS15                 0.017   epidermal growth factor receptor pathway substrate 15...
DCTN1                 0.016   dynactin 1 isoform 4 
DCTN1                 0.016   dynactin 1 isoform 3 
DCTN1                 0.016   dynactin 1 isoform 2 
DCTN1                 0.016   dynactin 1 isoform 1 
EEA1                  0.016   early endosome antigen 1, 162kD 
KIAA0226              0.016   hypothetical protein LOC9711 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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