Guide to the Human Genome
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Name: GRAMD3 Sequence: fasta or formatted (432aa) NCBI GI: 226443007
Description:

GRAM domain containing 3 isoform 2

Not currently referenced in the text

Other entries for this name:
alt prot {447aa} GRAM domain containing 3 isoform 1
alt prot {328aa} GRAM domain containing 3 isoform 3
alt prot {440aa} GRAM domain containing 3 isoform 4
alt prot {416aa} GRAM domain containing 3 isoform 5
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         26           2
 C cysteine            1.9          8           1
 D aspartate           4.9         21           1
 E glutamate           7.2         31           2
 F phenylalanine       3.7         16           1
 G glycine             4.2         18           1
 H histidine           2.5         11           2
 I isoleucine          4.6         20           2
 K lysine              9.0         39           3
 L leucine             9.5         41           2
 M methionine          1.2          5           1
 N asparagine          4.9         21           2
 P proline             4.6         20           1
 Q glutamine           5.1         22           2
 R arginine            3.5         15           2
 S serine             12.0         52           5
 T threonine           6.2         27           1
 V valine              6.7         29           2
 W tryptophan          0.5          2           1
 Y tyrosine            1.9          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   GRAM domain containing 3 isoform 2 
GRAMD3                0.935   GRAM domain containing 3 isoform 5 
GRAMD3                0.935   GRAM domain containing 3 isoform 1 
GRAMD3                0.838   GRAM domain containing 3 isoform 4 
GRAMD3                0.752   GRAM domain containing 3 isoform 3 
GRAMD2                0.139   GRAM domain containing 2 
GRAMD1A               0.098   GRAM domain containing 1A isoform 1 
GRAMD1A               0.097   GRAM domain containing 1A isoform 2 
GRAMD1B               0.091   GRAM domain containing 1B 
GRAMD1C               0.087   GRAM domain containing 1C 
TBC1D9                0.045   TBC1 domain family, member 9 (with GRAM domain) [Ho...
TBC1D8                0.035   TBC1 domain family, member 8 
TBC1D9B               0.029   TBC1 domain family, member 9B (with GRAM domain) iso...
TBC1D9B               0.029   TBC1 domain family, member 9B (with GRAM domain) iso...
TBC1D8B               0.023   TBC1 domain family, member 8B (with GRAM domain) iso...
TBC1D8B               0.023   TBC1 domain family, member 8B (with GRAM domain) iso...
GRAMD4                0.016   death-inducing-protein 
AFF4                  0.013   ALL1 fused gene from 5q31 
FAM133A               0.012   hypothetical protein LOC286499 
TOPORS                0.010   topoisomerase I binding, arginine/serine-rich 
MTF1                  0.010   metal-regulatory transcription factor 1 
CYLC2                 0.010   cylicin 2 
NKAP                  0.010   NFKB activating protein 
DSPP                  0.010   dentin sialophosphoprotein preproprotein 
BRD4                  0.010   bromodomain-containing protein 4 isoform long 
GPR110                0.010   G-protein coupled receptor 110 isoform 1 
FAM133B               0.008   hypothetical protein LOC257415 isoform 2 
FAM133B               0.008   hypothetical protein LOC257415 isoform 1 
ZCCHC10               0.008   zinc finger, CCHC domain containing 10 
EXO1                  0.008   exonuclease 1 isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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