Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 225735619
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|225735619 mesoderm induction early response 1 isoform i
[Homo sapiens]
(370 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|225735619 mesoderm induction early response 1 isoform i [Homo... 753 0.0
gi|118130872 mesoderm induction early response 1 isoform f [Homo... 753 0.0
gi|225735612 mesoderm induction early response 1 isoform e [Homo... 753 0.0
gi|225735610 mesoderm induction early response 1 isoform d [Homo... 753 0.0
gi|225735631 mesoderm induction early response 1 isoform g [Homo... 741 0.0
gi|225735617 mesoderm induction early response 1 isoform h [Homo... 712 0.0
gi|225735615 mesoderm induction early response 1 isoform a [Homo... 712 0.0
gi|118130815 mesoderm induction early response 1 isoform c [Homo... 712 0.0
gi|225735607 mesoderm induction early response 1 isoform b [Homo... 712 0.0
gi|225735605 mesoderm induction early response 1 isoform a [Homo... 712 0.0
gi|94721313 mesoderm induction early response 1, family member 3... 299 3e-81
gi|45267839 mesoderm induction early response 1, family member 2... 285 4e-77
gi|14141170 metastasis-associated protein 2 [Homo sapiens] 66 6e-11
gi|50838795 metastasis associated 1 family, member 3 [Homo sapiens] 64 3e-10
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 58 2e-08
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 58 2e-08
gi|210032580 SET domain containing 1B [Homo sapiens] 57 3e-08
gi|115527080 metastasis associated protein [Homo sapiens] 55 8e-08
gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo sap... 54 3e-07
gi|55741677 SET domain containing 1A [Homo sapiens] 52 9e-07
gi|210031154 zinc finger protein 541 [Homo sapiens] 52 1e-06
gi|21735415 centromere protein B [Homo sapiens] 51 1e-06
gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo sap... 51 2e-06
gi|115529449 upstream binding transcription factor, RNA polymera... 51 2e-06
gi|115529451 upstream binding transcription factor, RNA polymera... 51 2e-06
gi|7657671 upstream binding transcription factor, RNA polymerase... 51 2e-06
gi|209977084 REST corepressor 3 isoform c [Homo sapiens] 51 2e-06
gi|209977080 REST corepressor 3 isoform a [Homo sapiens] 51 2e-06
gi|94681063 bromodomain adjacent to zinc finger domain, 2B [Homo... 51 2e-06
gi|17975763 myelin transcription factor 1 [Homo sapiens] 50 2e-06
>gi|225735619 mesoderm induction early response 1 isoform i [Homo
sapiens]
Length = 370
Score = 753 bits (1943), Expect = 0.0
Identities = 370/370 (100%), Positives = 370/370 (100%)
Query: 1 MPIHELLSLYGYGSTVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSG 60
MPIHELLSLYGYGSTVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSG
Sbjct: 1 MPIHELLSLYGYGSTVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSG 60
Query: 61 QEDETQSSNDDPSQSVASQDAQEIIRPRRCKYFDTNSEVEEESEEDEDYIPSEDWKKEIM 120
QEDETQSSNDDPSQSVASQDAQEIIRPRRCKYFDTNSEVEEESEEDEDYIPSEDWKKEIM
Sbjct: 61 QEDETQSSNDDPSQSVASQDAQEIIRPRRCKYFDTNSEVEEESEEDEDYIPSEDWKKEIM 120
Query: 121 VGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEKGVEA 180
VGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEKGVEA
Sbjct: 121 VGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEKGVEA 180
Query: 181 IPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAAREELSVWTEEECRNFEQGLKAY 240
IPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAAREELSVWTEEECRNFEQGLKAY
Sbjct: 181 IPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAAREELSVWTEEECRNFEQGLKAY 240
Query: 241 GKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYMDRL 300
GKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYMDRL
Sbjct: 241 GKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYMDRL 300
Query: 301 LDESESAASSRAPSPPPTASNSSNSQSEKEDGTVSTANQNGVSSNGPGILQMLLPVHFSA 360
LDESESAASSRAPSPPPTASNSSNSQSEKEDGTVSTANQNGVSSNGPGILQMLLPVHFSA
Sbjct: 301 LDESESAASSRAPSPPPTASNSSNSQSEKEDGTVSTANQNGVSSNGPGILQMLLPVHFSA 360
Query: 361 ISSRANAFLK 370
ISSRANAFLK
Sbjct: 361 ISSRANAFLK 370
>gi|118130872 mesoderm induction early response 1 isoform f [Homo
sapiens]
Length = 433
Score = 753 bits (1943), Expect = 0.0
Identities = 370/370 (100%), Positives = 370/370 (100%)
Query: 1 MPIHELLSLYGYGSTVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSG 60
MPIHELLSLYGYGSTVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSG
Sbjct: 64 MPIHELLSLYGYGSTVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSG 123
Query: 61 QEDETQSSNDDPSQSVASQDAQEIIRPRRCKYFDTNSEVEEESEEDEDYIPSEDWKKEIM 120
QEDETQSSNDDPSQSVASQDAQEIIRPRRCKYFDTNSEVEEESEEDEDYIPSEDWKKEIM
Sbjct: 124 QEDETQSSNDDPSQSVASQDAQEIIRPRRCKYFDTNSEVEEESEEDEDYIPSEDWKKEIM 183
Query: 121 VGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEKGVEA 180
VGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEKGVEA
Sbjct: 184 VGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEKGVEA 243
Query: 181 IPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAAREELSVWTEEECRNFEQGLKAY 240
IPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAAREELSVWTEEECRNFEQGLKAY
Sbjct: 244 IPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAAREELSVWTEEECRNFEQGLKAY 303
Query: 241 GKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYMDRL 300
GKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYMDRL
Sbjct: 304 GKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYMDRL 363
Query: 301 LDESESAASSRAPSPPPTASNSSNSQSEKEDGTVSTANQNGVSSNGPGILQMLLPVHFSA 360
LDESESAASSRAPSPPPTASNSSNSQSEKEDGTVSTANQNGVSSNGPGILQMLLPVHFSA
Sbjct: 364 LDESESAASSRAPSPPPTASNSSNSQSEKEDGTVSTANQNGVSSNGPGILQMLLPVHFSA 423
Query: 361 ISSRANAFLK 370
ISSRANAFLK
Sbjct: 424 ISSRANAFLK 433
>gi|225735612 mesoderm induction early response 1 isoform e [Homo
sapiens]
Length = 486
Score = 753 bits (1943), Expect = 0.0
Identities = 370/370 (100%), Positives = 370/370 (100%)
Query: 1 MPIHELLSLYGYGSTVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSG 60
MPIHELLSLYGYGSTVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSG
Sbjct: 117 MPIHELLSLYGYGSTVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSG 176
Query: 61 QEDETQSSNDDPSQSVASQDAQEIIRPRRCKYFDTNSEVEEESEEDEDYIPSEDWKKEIM 120
QEDETQSSNDDPSQSVASQDAQEIIRPRRCKYFDTNSEVEEESEEDEDYIPSEDWKKEIM
Sbjct: 177 QEDETQSSNDDPSQSVASQDAQEIIRPRRCKYFDTNSEVEEESEEDEDYIPSEDWKKEIM 236
Query: 121 VGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEKGVEA 180
VGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEKGVEA
Sbjct: 237 VGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEKGVEA 296
Query: 181 IPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAAREELSVWTEEECRNFEQGLKAY 240
IPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAAREELSVWTEEECRNFEQGLKAY
Sbjct: 297 IPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAAREELSVWTEEECRNFEQGLKAY 356
Query: 241 GKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYMDRL 300
GKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYMDRL
Sbjct: 357 GKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYMDRL 416
Query: 301 LDESESAASSRAPSPPPTASNSSNSQSEKEDGTVSTANQNGVSSNGPGILQMLLPVHFSA 360
LDESESAASSRAPSPPPTASNSSNSQSEKEDGTVSTANQNGVSSNGPGILQMLLPVHFSA
Sbjct: 417 LDESESAASSRAPSPPPTASNSSNSQSEKEDGTVSTANQNGVSSNGPGILQMLLPVHFSA 476
Query: 361 ISSRANAFLK 370
ISSRANAFLK
Sbjct: 477 ISSRANAFLK 486
>gi|225735610 mesoderm induction early response 1 isoform d [Homo
sapiens]
Length = 450
Score = 753 bits (1943), Expect = 0.0
Identities = 370/370 (100%), Positives = 370/370 (100%)
Query: 1 MPIHELLSLYGYGSTVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSG 60
MPIHELLSLYGYGSTVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSG
Sbjct: 81 MPIHELLSLYGYGSTVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSG 140
Query: 61 QEDETQSSNDDPSQSVASQDAQEIIRPRRCKYFDTNSEVEEESEEDEDYIPSEDWKKEIM 120
QEDETQSSNDDPSQSVASQDAQEIIRPRRCKYFDTNSEVEEESEEDEDYIPSEDWKKEIM
Sbjct: 141 QEDETQSSNDDPSQSVASQDAQEIIRPRRCKYFDTNSEVEEESEEDEDYIPSEDWKKEIM 200
Query: 121 VGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEKGVEA 180
VGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEKGVEA
Sbjct: 201 VGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEKGVEA 260
Query: 181 IPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAAREELSVWTEEECRNFEQGLKAY 240
IPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAAREELSVWTEEECRNFEQGLKAY
Sbjct: 261 IPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAAREELSVWTEEECRNFEQGLKAY 320
Query: 241 GKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYMDRL 300
GKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYMDRL
Sbjct: 321 GKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYMDRL 380
Query: 301 LDESESAASSRAPSPPPTASNSSNSQSEKEDGTVSTANQNGVSSNGPGILQMLLPVHFSA 360
LDESESAASSRAPSPPPTASNSSNSQSEKEDGTVSTANQNGVSSNGPGILQMLLPVHFSA
Sbjct: 381 LDESESAASSRAPSPPPTASNSSNSQSEKEDGTVSTANQNGVSSNGPGILQMLLPVHFSA 440
Query: 361 ISSRANAFLK 370
ISSRANAFLK
Sbjct: 441 ISSRANAFLK 450
>gi|225735631 mesoderm induction early response 1 isoform g [Homo
sapiens]
Length = 470
Score = 741 bits (1912), Expect = 0.0
Identities = 370/390 (94%), Positives = 370/390 (94%), Gaps = 20/390 (5%)
Query: 1 MPIHELLSLYGYGSTVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSG 60
MPIHELLSLYGYGSTVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSG
Sbjct: 81 MPIHELLSLYGYGSTVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSG 140
Query: 61 QEDETQSSNDDPSQSVASQDAQEIIRPRRCKYFDTNSEVEEESEEDEDYIPSEDWKKEIM 120
QEDETQSSNDDPSQSVASQDAQEIIRPRRCKYFDTNSEVEEESEEDEDYIPSEDWKKEIM
Sbjct: 141 QEDETQSSNDDPSQSVASQDAQEIIRPRRCKYFDTNSEVEEESEEDEDYIPSEDWKKEIM 200
Query: 121 VGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEKGVEA 180
VGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEKGVEA
Sbjct: 201 VGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEKGVEA 260
Query: 181 IPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAAREELSVWTEEECRNFEQGLKAY 240
IPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAAREELSVWTEEECRNFEQGLKAY
Sbjct: 261 IPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAAREELSVWTEEECRNFEQGLKAY 320
Query: 241 GKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYMDRL 300
GKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYMDRL
Sbjct: 321 GKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYMDRL 380
Query: 301 LDESESAASSRAPSPPPTASNSSNSQSEKEDGTVSTANQNGVSSNGP------------- 347
LDESESAASSRAPSPPPTASNSSNSQSEKEDGTVSTANQNGVSSNGP
Sbjct: 381 LDESESAASSRAPSPPPTASNSSNSQSEKEDGTVSTANQNGVSSNGPGEILNKEEVKVEG 440
Query: 348 -------GILQMLLPVHFSAISSRANAFLK 370
GILQMLLPVHFSAISSRANAFLK
Sbjct: 441 LHINGPTGILQMLLPVHFSAISSRANAFLK 470
>gi|225735617 mesoderm induction early response 1 isoform h [Homo
sapiens]
Length = 485
Score = 712 bits (1838), Expect = 0.0
Identities = 348/348 (100%), Positives = 348/348 (100%)
Query: 1 MPIHELLSLYGYGSTVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSG 60
MPIHELLSLYGYGSTVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSG
Sbjct: 37 MPIHELLSLYGYGSTVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSG 96
Query: 61 QEDETQSSNDDPSQSVASQDAQEIIRPRRCKYFDTNSEVEEESEEDEDYIPSEDWKKEIM 120
QEDETQSSNDDPSQSVASQDAQEIIRPRRCKYFDTNSEVEEESEEDEDYIPSEDWKKEIM
Sbjct: 97 QEDETQSSNDDPSQSVASQDAQEIIRPRRCKYFDTNSEVEEESEEDEDYIPSEDWKKEIM 156
Query: 121 VGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEKGVEA 180
VGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEKGVEA
Sbjct: 157 VGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEKGVEA 216
Query: 181 IPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAAREELSVWTEEECRNFEQGLKAY 240
IPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAAREELSVWTEEECRNFEQGLKAY
Sbjct: 217 IPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAAREELSVWTEEECRNFEQGLKAY 276
Query: 241 GKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYMDRL 300
GKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYMDRL
Sbjct: 277 GKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYMDRL 336
Query: 301 LDESESAASSRAPSPPPTASNSSNSQSEKEDGTVSTANQNGVSSNGPG 348
LDESESAASSRAPSPPPTASNSSNSQSEKEDGTVSTANQNGVSSNGPG
Sbjct: 337 LDESESAASSRAPSPPPTASNSSNSQSEKEDGTVSTANQNGVSSNGPG 384
>gi|225735615 mesoderm induction early response 1 isoform a [Homo
sapiens]
Length = 529
Score = 712 bits (1838), Expect = 0.0
Identities = 348/348 (100%), Positives = 348/348 (100%)
Query: 1 MPIHELLSLYGYGSTVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSG 60
MPIHELLSLYGYGSTVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSG
Sbjct: 81 MPIHELLSLYGYGSTVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSG 140
Query: 61 QEDETQSSNDDPSQSVASQDAQEIIRPRRCKYFDTNSEVEEESEEDEDYIPSEDWKKEIM 120
QEDETQSSNDDPSQSVASQDAQEIIRPRRCKYFDTNSEVEEESEEDEDYIPSEDWKKEIM
Sbjct: 141 QEDETQSSNDDPSQSVASQDAQEIIRPRRCKYFDTNSEVEEESEEDEDYIPSEDWKKEIM 200
Query: 121 VGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEKGVEA 180
VGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEKGVEA
Sbjct: 201 VGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEKGVEA 260
Query: 181 IPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAAREELSVWTEEECRNFEQGLKAY 240
IPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAAREELSVWTEEECRNFEQGLKAY
Sbjct: 261 IPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAAREELSVWTEEECRNFEQGLKAY 320
Query: 241 GKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYMDRL 300
GKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYMDRL
Sbjct: 321 GKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYMDRL 380
Query: 301 LDESESAASSRAPSPPPTASNSSNSQSEKEDGTVSTANQNGVSSNGPG 348
LDESESAASSRAPSPPPTASNSSNSQSEKEDGTVSTANQNGVSSNGPG
Sbjct: 381 LDESESAASSRAPSPPPTASNSSNSQSEKEDGTVSTANQNGVSSNGPG 428
>gi|118130815 mesoderm induction early response 1 isoform c [Homo
sapiens]
Length = 512
Score = 712 bits (1838), Expect = 0.0
Identities = 348/348 (100%), Positives = 348/348 (100%)
Query: 1 MPIHELLSLYGYGSTVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSG 60
MPIHELLSLYGYGSTVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSG
Sbjct: 64 MPIHELLSLYGYGSTVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSG 123
Query: 61 QEDETQSSNDDPSQSVASQDAQEIIRPRRCKYFDTNSEVEEESEEDEDYIPSEDWKKEIM 120
QEDETQSSNDDPSQSVASQDAQEIIRPRRCKYFDTNSEVEEESEEDEDYIPSEDWKKEIM
Sbjct: 124 QEDETQSSNDDPSQSVASQDAQEIIRPRRCKYFDTNSEVEEESEEDEDYIPSEDWKKEIM 183
Query: 121 VGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEKGVEA 180
VGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEKGVEA
Sbjct: 184 VGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEKGVEA 243
Query: 181 IPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAAREELSVWTEEECRNFEQGLKAY 240
IPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAAREELSVWTEEECRNFEQGLKAY
Sbjct: 244 IPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAAREELSVWTEEECRNFEQGLKAY 303
Query: 241 GKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYMDRL 300
GKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYMDRL
Sbjct: 304 GKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYMDRL 363
Query: 301 LDESESAASSRAPSPPPTASNSSNSQSEKEDGTVSTANQNGVSSNGPG 348
LDESESAASSRAPSPPPTASNSSNSQSEKEDGTVSTANQNGVSSNGPG
Sbjct: 364 LDESESAASSRAPSPPPTASNSSNSQSEKEDGTVSTANQNGVSSNGPG 411
>gi|225735607 mesoderm induction early response 1 isoform b [Homo
sapiens]
Length = 565
Score = 712 bits (1838), Expect = 0.0
Identities = 348/348 (100%), Positives = 348/348 (100%)
Query: 1 MPIHELLSLYGYGSTVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSG 60
MPIHELLSLYGYGSTVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSG
Sbjct: 117 MPIHELLSLYGYGSTVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSG 176
Query: 61 QEDETQSSNDDPSQSVASQDAQEIIRPRRCKYFDTNSEVEEESEEDEDYIPSEDWKKEIM 120
QEDETQSSNDDPSQSVASQDAQEIIRPRRCKYFDTNSEVEEESEEDEDYIPSEDWKKEIM
Sbjct: 177 QEDETQSSNDDPSQSVASQDAQEIIRPRRCKYFDTNSEVEEESEEDEDYIPSEDWKKEIM 236
Query: 121 VGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEKGVEA 180
VGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEKGVEA
Sbjct: 237 VGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEKGVEA 296
Query: 181 IPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAAREELSVWTEEECRNFEQGLKAY 240
IPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAAREELSVWTEEECRNFEQGLKAY
Sbjct: 297 IPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAAREELSVWTEEECRNFEQGLKAY 356
Query: 241 GKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYMDRL 300
GKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYMDRL
Sbjct: 357 GKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYMDRL 416
Query: 301 LDESESAASSRAPSPPPTASNSSNSQSEKEDGTVSTANQNGVSSNGPG 348
LDESESAASSRAPSPPPTASNSSNSQSEKEDGTVSTANQNGVSSNGPG
Sbjct: 417 LDESESAASSRAPSPPPTASNSSNSQSEKEDGTVSTANQNGVSSNGPG 464
>gi|225735605 mesoderm induction early response 1 isoform a [Homo
sapiens]
Length = 529
Score = 712 bits (1838), Expect = 0.0
Identities = 348/348 (100%), Positives = 348/348 (100%)
Query: 1 MPIHELLSLYGYGSTVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSG 60
MPIHELLSLYGYGSTVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSG
Sbjct: 81 MPIHELLSLYGYGSTVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSG 140
Query: 61 QEDETQSSNDDPSQSVASQDAQEIIRPRRCKYFDTNSEVEEESEEDEDYIPSEDWKKEIM 120
QEDETQSSNDDPSQSVASQDAQEIIRPRRCKYFDTNSEVEEESEEDEDYIPSEDWKKEIM
Sbjct: 141 QEDETQSSNDDPSQSVASQDAQEIIRPRRCKYFDTNSEVEEESEEDEDYIPSEDWKKEIM 200
Query: 121 VGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEKGVEA 180
VGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEKGVEA
Sbjct: 201 VGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEKGVEA 260
Query: 181 IPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAAREELSVWTEEECRNFEQGLKAY 240
IPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAAREELSVWTEEECRNFEQGLKAY
Sbjct: 261 IPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAAREELSVWTEEECRNFEQGLKAY 320
Query: 241 GKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYMDRL 300
GKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYMDRL
Sbjct: 321 GKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYMDRL 380
Query: 301 LDESESAASSRAPSPPPTASNSSNSQSEKEDGTVSTANQNGVSSNGPG 348
LDESESAASSRAPSPPPTASNSSNSQSEKEDGTVSTANQNGVSSNGPG
Sbjct: 381 LDESESAASSRAPSPPPTASNSSNSQSEKEDGTVSTANQNGVSSNGPG 428
>gi|94721313 mesoderm induction early response 1, family member 3
[Homo sapiens]
Length = 549
Score = 299 bits (765), Expect = 3e-81
Identities = 166/328 (50%), Positives = 208/328 (63%), Gaps = 21/328 (6%)
Query: 1 MPIHELLSLYGYGSTVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDS-S 59
MP+ +LL+ YGY T+ E ++ D D KEE KD S
Sbjct: 64 MPLEDLLAFYGYEPTIPAVANSSANSSPSELADELPDMTLD---------KEEIAKDLLS 114
Query: 60 GQEDETQSSNDDPSQSVASQDAQEII-RPRRCKYF-DTNSEVEEESEEDEDYIPSEDWKK 117
G ++ETQSS DD + SV S + + RP R D + E E E E + ED +K
Sbjct: 115 GDDEETQSSADDLTPSVTSHETSDFFPRPLRSNTACDGDKESEVEDVETDSGNSPEDLRK 174
Query: 118 EIMVGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEKG 177
EIM+G +QAEIP + Y NEKVYEN+DQLLW P+ + E KV +L + S RTG EK
Sbjct: 175 EIMIGLQYQAEIPPYLGEYDGNEKVYENEDQLLWCPDVVLESKVKEYLVETSLRTGSEKI 234
Query: 178 VEAIPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAAREELSVWTEEECRNFEQGL 237
++ I G+H +DNEQALYEL+KCN + +EA+ R N KA+ + ++ WTEEECR+FE L
Sbjct: 235 MDRISAGTHTRDNEQALYELLKCNHNIKEAIERYCCNGKAS-QGMTAWTEEECRSFEHAL 293
Query: 238 KAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYM 297
+GKDFHLIQ NKVRTR+V ECVAFYYMWKKSERYD+FAQQTRFGKK+YN HPGVTDYM
Sbjct: 294 MLFGKDFHLIQKNKVRTRTVAECVAFYYMWKKSERYDYFAQQTRFGKKRYNHHPGVTDYM 353
Query: 298 DRLLDESE--------SAASSRAPSPPP 317
DRL+DE+E SA +S P P P
Sbjct: 354 DRLVDETEALGGTVNASALTSNRPEPIP 381
>gi|45267839 mesoderm induction early response 1, family member 2
[Homo sapiens]
Length = 545
Score = 285 bits (730), Expect = 4e-77
Identities = 167/352 (47%), Positives = 214/352 (60%), Gaps = 22/352 (6%)
Query: 1 MPIHELLSLYGYGSTVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKD--S 58
MP ELL+LYGY E + + E EG D N +KE+ KD S
Sbjct: 85 MPFDELLALYGY-------EASDPISDRESEG-----GDVAPNLPDMTLDKEQIAKDLLS 132
Query: 59 SGQEDETQSSNDDPSQSVASQDAQEIIRPRRCKYFDTNSEVEE----ESEEDEDYIPSED 114
+E+ETQSS DD + SV S +A ++ R F + + E S+ +ED +P+
Sbjct: 133 GEEEEETQSSADDLTPSVTSHEASDLFPNRSGSRFLADEDREPGSSASSDTEEDSLPANK 192
Query: 115 WKKEIMVGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGD 174
KKEIMVG FQA++ + + EK+YEN+DQLLWDP LPE +V FL A +R
Sbjct: 193 CKKEIMVGPQFQADLS-NLHLNRHCEKIYENEDQLLWDPSVLPEREVEEFLYRAVKRRWH 251
Query: 175 EKGVEAIPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAAREELSVWTEEECRNFE 234
E +PEG +KD+EQALYELVKCNF+ EEALRRLRFNVK R+ L W+EEECRNFE
Sbjct: 252 EMAGPQLPEGEAVKDSEQALYELVKCNFNVEEALRRLRFNVKVIRDGLCAWSEEECRNFE 311
Query: 235 QGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVT 294
G + +GK+FHLIQANKVRTRSVGECV +YY+WKKSERYD+FAQQTR G++KY + G T
Sbjct: 312 HGFRVHGKNFHLIQANKVRTRSVGECVEYYYLWKKSERYDYFAQQTRLGRRKY-VPSGTT 370
Query: 295 DYMDRLLDESESAASSRAPSPPPTASNSSNSQSEKEDGTVSTANQNGVSSNG 346
D D+ LD S+ R P P + DGT ++ GV+S+G
Sbjct: 371 D-ADQDLDGSDPDGPGR-PRPEQDTLTGMRTDPLSVDGTAGGLDEPGVASDG 420
>gi|14141170 metastasis-associated protein 2 [Homo sapiens]
Length = 668
Score = 65.9 bits (159), Expect = 6e-11
Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 19/173 (10%)
Query: 118 EIMVGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEKG 177
EI VG +QAEIP + + + + + + +WDP+ D+ I +R G
Sbjct: 146 EIRVGCKYQAEIPDRLVEGESDNRNQQKMEMKVWDPDNPLTDRQIDQFLVVARAVGTF-- 203
Query: 178 VEAIPEGSHIKDNE---------------QALYELVKCNFDTEEALRRL--RFNVKAARE 220
A+ S I+ A+ L + +D +A+ L + R+
Sbjct: 204 ARALDCSSSIRQPSLHMSAAAASRDITLFHAMDTLQRNGYDLAKAMSTLVPQGGPVLCRD 263
Query: 221 ELSVWTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERY 273
E+ W+ E FE+ L+ YGKDF+ I+ + + +S+ V FYYMWK ++RY
Sbjct: 264 EMEEWSASEAMLFEEALEKYGKDFNDIRQDFLPWKSLASIVQFYYMWKTTDRY 316
>gi|50838795 metastasis associated 1 family, member 3 [Homo sapiens]
Length = 515
Score = 63.5 bits (153), Expect = 3e-10
Identities = 63/269 (23%), Positives = 110/269 (40%), Gaps = 26/269 (9%)
Query: 22 DEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDDPSQSVASQDA 81
D+ +E EEE E +AD D +++E + S Q + +++ SVA +
Sbjct: 60 DKHAKEIEEESETTVEADLTDKQKHQLKHRELFL---SRQYESLPATHIRGKCSVALLNE 116
Query: 82 QEIIRPRRCKYFDTNSEVEEESEEDEDYIPSEDWKKEIMVGSMFQAEIPVGICRYKENEK 141
E + Y D D K EI VG +QA+IP + + +E+
Sbjct: 117 TESV----LSYLDKEDTFFYSLVYDPSLKTLLADKGEIRVGPRYQADIPEMLLEGESDER 172
Query: 142 VYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEKGVEAIPEGSHIKDNEQALYELVKCN 201
+ +WDP D+ I +R G A+ S ++ +
Sbjct: 173 EQSKLEVKVWDPNSPLTDRQIDQFLVVARAVGTF--ARALDCSSSVRQPSLHMSAAAASR 230
Query: 202 ----FDTEEALRRLRFNVKAA-------------REELSVWTEEECRNFEQGLKAYGKDF 244
F + L R +++ +A R+E+ W+ E FE+ L+ YGKDF
Sbjct: 231 DITLFHAMDTLYRHSYDLSSAISVLVPLGGPVLCRDEMEEWSASEASLFEEALEKYGKDF 290
Query: 245 HLIQANKVRTRSVGECVAFYYMWKKSERY 273
+ I+ + + +S+ + +YYMWK ++RY
Sbjct: 291 NDIRQDFLPWKSLTSIIEYYYMWKTTDRY 319
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 57.8 bits (138), Expect = 2e-08
Identities = 47/162 (29%), Positives = 76/162 (46%), Gaps = 14/162 (8%)
Query: 118 EIMVGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEKG 177
EI VG QA++P + ++L+W P D ++++L+ A+R G
Sbjct: 285 EIRVGPSHQAKLPDLQPFPSPDGDTVTQHEELVWMPGVNDCD-LLMYLR-AARSMAAFAG 342
Query: 178 V-------EAIPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAAREEL--SVWTEE 228
+ + S AL L + +D +AL+RL VK +L WTE+
Sbjct: 343 MCDGGSTEDGCVAASRDDTTLNALNTLHESGYDAGKALQRL---VKKPVPKLIEKCWTED 399
Query: 229 ECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKS 270
E + F +GL+ YGK+F I+ + + GE + FYY WKK+
Sbjct: 400 EVKRFVKGLRQYGKNFFRIRKELLPNKETGELITFYYYWKKT 441
Score = 33.1 bits (74), Expect = 0.41
Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 31 EGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDDPSQSVASQDAQEIIRPRRC 90
E + ED DND+NS + E+ ++N K ++ + ++ S ++D + RP C
Sbjct: 52 ESDHSEDEDNDNNSATAEESTKKNKKKPPKKKSRYERTDTGEITSYITED-DVVYRPGDC 110
Query: 91 KYFDT 95
Y ++
Sbjct: 111 VYIES 115
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 57.8 bits (138), Expect = 2e-08
Identities = 47/162 (29%), Positives = 76/162 (46%), Gaps = 14/162 (8%)
Query: 118 EIMVGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEKG 177
EI VG QA++P + ++L+W P D ++++L+ A+R G
Sbjct: 285 EIRVGPSHQAKLPDLQPFPSPDGDTVTQHEELVWMPGVNDCD-LLMYLR-AARSMAAFAG 342
Query: 178 V-------EAIPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAAREEL--SVWTEE 228
+ + S AL L + +D +AL+RL VK +L WTE+
Sbjct: 343 MCDGGSTEDGCVAASRDDTTLNALNTLHESGYDAGKALQRL---VKKPVPKLIEKCWTED 399
Query: 229 ECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKS 270
E + F +GL+ YGK+F I+ + + GE + FYY WKK+
Sbjct: 400 EVKRFVKGLRQYGKNFFRIRKELLPNKETGELITFYYYWKKT 441
Score = 33.1 bits (74), Expect = 0.41
Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 31 EGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDDPSQSVASQDAQEIIRPRRC 90
E + ED DND+NS + E+ ++N K ++ + ++ S ++D + RP C
Sbjct: 52 ESDHSEDEDNDNNSATAEESTKKNKKKPPKKKSRYERTDTGEITSYITED-DVVYRPGDC 110
Query: 91 KYFDT 95
Y ++
Sbjct: 111 VYIES 115
>gi|210032580 SET domain containing 1B [Homo sapiens]
Length = 1923
Score = 56.6 bits (135), Expect = 3e-08
Identities = 31/99 (31%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 21 EDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDDPSQSVASQ- 79
E+EEE EEEEE EDD+D D+DD ++++ + ++S ++DE S ++ V S+
Sbjct: 1049 EEEEEAEEEEEEEDDDDDDSDDRDESENDDEDTALSEAS-EKDEGDSDEEETVSIVTSKA 1107
Query: 80 DAQEIIRPRRCKYFDTNSEVEEESEEDEDYIPSEDWKKE 118
+A F+++SE S EDE+ + + + ++E
Sbjct: 1108 EATSSSESSESSEFESSSESSPSSSEDEEEVVAREEEEE 1146
Score = 40.4 bits (93), Expect = 0.003
Identities = 28/118 (23%), Positives = 48/118 (40%), Gaps = 35/118 (29%)
Query: 20 EEDEEEEEEEEEGEDDE------------------------DADNDDNSGCSGENKEENI 55
EE+E EEEEEEE +DD+ + D+D+ S +
Sbjct: 1050 EEEEAEEEEEEEDDDDDDSDDRDESENDDEDTALSEASEKDEGDSDEEETVSIVTSKAEA 1109
Query: 56 KDSSGQEDETQSSNDDPSQSVASQDAQEIIRPRRCKYFDTNSEVEEESEEDEDYIPSE 113
SS + ++ + S +S+D +E++ + EEE EE+E+ + E
Sbjct: 1110 TSSSESSESSEFESSSESSPSSSEDEEEVV-----------AREEEEEEEEEEMVAEE 1156
Score = 37.7 bits (86), Expect = 0.017
Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 12/110 (10%)
Query: 19 PEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIK---------DSSGQEDETQSSN 69
P +EE+EE E E D D + + K ++ DS G+EDE +S +
Sbjct: 983 PSTSVDEEDEESERERDRDMADTPCELAKRDPKGVGVRRRPARPLELDSGGEEDEKESLS 1042
Query: 70 DDPSQSVASQDAQEIIRPRRCKYFDTNSEVEEESE-EDEDYIPSEDWKKE 118
++ + ++A+E D +S+ +ESE +DED SE +K+
Sbjct: 1043 EEQESTEEEEEAEE--EEEEEDDDDDDSDDRDESENDDEDTALSEASEKD 1090
Score = 32.7 bits (73), Expect = 0.54
Identities = 40/179 (22%), Positives = 62/179 (34%), Gaps = 18/179 (10%)
Query: 15 TVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDDPSQ 74
TV + E E E E + ++S S E++EE + +E+E + + S
Sbjct: 1099 TVSIVTSKAEATSSSESSESSEFESSSESSPSSSEDEEEVVAREEEEEEEEEEMVAEESM 1158
Query: 75 SVA-----SQDAQEIIRPRRCKYFDTNSEVEEESEEDEDYIPSEDWKKEIMVGSMFQAEI 129
+ A QD +E D+ EE E E P E + + +
Sbjct: 1159 ASAGPEDFEQDGEEAALAPGAPAVDSLGMEEEVDIETEAVAPEE------RPSMLDEPPL 1212
Query: 130 PVGI-----CRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEKGVEAIPE 183
PVG+ R E + +L PE P K + S E +E PE
Sbjct: 1213 PVGVEEPADSREPPEEPGLSQEGAMLLSPE--PPAKEVEARPPLSPERAPEHDLEVEPE 1269
>gi|115527080 metastasis associated protein [Homo sapiens]
Length = 715
Score = 55.5 bits (132), Expect = 8e-08
Identities = 45/175 (25%), Positives = 77/175 (44%), Gaps = 19/175 (10%)
Query: 116 KKEIMVGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDE 175
K EI VG+ +QA+I + +E+ + + +W+ DK I +R G
Sbjct: 164 KGEIRVGNRYQADITDLLKEGEEDGRDQSRLETQVWEAHNPLTDKQIDQFLVVARSVGTF 223
Query: 176 KGVEAIPEGSHIKDNE---------------QALYELVKCNFDTEEALRRL--RFNVKAA 218
A+ S ++ A+ L K +D +A+ L +
Sbjct: 224 --ARALDCSSSVRQPSLHMSAAAASRDITLFHAMDTLHKNIYDISKAISALVPQGGPVLC 281
Query: 219 REELSVWTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERY 273
R+E+ W+ E FE+ L+ YGKDF IQ + + +S+ + +YYMWK ++RY
Sbjct: 282 RDEMEEWSASEANLFEEALEKYGKDFTDIQQDFLPWKSLTSIIEYYYMWKTTDRY 336
>gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo
sapiens]
Length = 2462
Score = 53.5 bits (127), Expect = 3e-07
Identities = 59/224 (26%), Positives = 97/224 (43%), Gaps = 24/224 (10%)
Query: 137 KENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEKGVEAIPEGSHIKDNEQA--- 193
KE EK E +++ + E ED + D S DEK EA+ N Q
Sbjct: 523 KEKEKEAEKEEEKP-EVENDKEDLLKEKTDDTSGEDNDEK--EAVASKGRKTANSQGRRK 579
Query: 194 --LYELVKCNFDTEEALRRLRFNVKAARE--ELSVWTEEECRNFEQGLKAYGKDFHLIQA 249
+ + ++EEA+ + A+ E E S WTEEE ++GL +G+++ I A
Sbjct: 580 GRITRSMANEANSEEAITPQQSAELASMELNESSRWTEEEMETAKKGLLEHGRNWSAI-A 638
Query: 250 NKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYMDRLLDESESAAS 309
V +++V +C FY+ +KK + D QQ + +K R ++ +AAS
Sbjct: 639 RMVGSKTVSQCKNFYFNYKKRQNLDEILQQHKLKMEKER-------NARRKKKKAPAAAS 691
Query: 310 SRAPSPPPT------ASNSSNSQSEKEDGTVSTANQNGVSSNGP 347
A PP AS S ++ E + +T N + + + P
Sbjct: 692 EEAAFPPVVEDEEMEASGVSGNEEEMVEEAEATVNNSSDTESIP 735
Score = 48.9 bits (115), Expect = 7e-06
Identities = 29/114 (25%), Positives = 55/114 (48%), Gaps = 15/114 (13%)
Query: 219 REELSVWTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQ 278
R+ +++W+E+E F + + K+F LI A+ + ++V ECV +YY+ KK+E Y +
Sbjct: 426 RQVMNMWSEQEKETFREKFMQHPKNFGLI-ASFLERKTVAECVLYYYLTKKNENYKSLVR 484
Query: 279 QT--RFGKKKYNLHPGVTDYMDRLLDESESAASSRAPSPPPTASNSSNSQSEKE 330
++ R GK + + + + + P P +S + EKE
Sbjct: 485 RSYRRRGKSQ------------QQQQQQQQQQQQQQQQPMPRSSQEEKDEKEKE 526
Score = 37.4 bits (85), Expect = 0.022
Identities = 24/90 (26%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 17 RLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDDPSQSV 76
R +E+++E+E+E+E E +E+ +N +KE+ +K+ + D+T ++D ++V
Sbjct: 514 RSSQEEKDEKEKEKEAEKEEEKPEVEN------DKEDLLKEKT---DDTSGEDNDEKEAV 564
Query: 77 ASQDAQEIIRPRRCKYFDTNSEVEEESEED 106
AS+ + R K T S E + E+
Sbjct: 565 ASKGRKTANSQGRRKGRITRSMANEANSEE 594
>gi|55741677 SET domain containing 1A [Homo sapiens]
Length = 1707
Score = 52.0 bits (123), Expect = 9e-07
Identities = 33/119 (27%), Positives = 53/119 (44%), Gaps = 7/119 (5%)
Query: 20 EEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEEN-------IKDSSGQEDETQSSNDDP 72
EED+EE+EE+E+ E+ D + GE++E + DS G+ D T S
Sbjct: 978 EEDDEEDEEDEDREEAVDTTKKETEVSDGEDEESDSSSKCSLYADSDGENDSTSDSESSS 1037
Query: 73 SQSVASQDAQEIIRPRRCKYFDTNSEVEEESEEDEDYIPSEDWKKEIMVGSMFQAEIPV 131
S S +S + +++SE EEE E + +E+ V + E+PV
Sbjct: 1038 SSSSSSSSSSSSSSSSSSSSSESSSEDEEEEERPAALPSASPPPREVPVPTPAPVEVPV 1096
Score = 34.7 bits (78), Expect = 0.14
Identities = 14/30 (46%), Positives = 21/30 (70%)
Query: 20 EEDEEEEEEEEEGEDDEDADNDDNSGCSGE 49
+ +E EEE EEEGE++E+ +D +S GE
Sbjct: 1357 QREEGEEEGEEEGEEEEEESSDSSSSSDGE 1386
Score = 31.6 bits (70), Expect = 1.2
Identities = 14/37 (37%), Positives = 23/37 (62%)
Query: 20 EEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIK 56
EE EEE EEE E E++E +D+ +S G + +++
Sbjct: 1359 EEGEEEGEEEGEEEEEESSDSSSSSDGEGALRRRSLR 1395
Score = 31.2 bits (69), Expect = 1.6
Identities = 26/136 (19%), Positives = 58/136 (42%), Gaps = 17/136 (12%)
Query: 14 STVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDET---QSSND 70
S + P EE+E++ E +++A G ++E + G+ ++ S +
Sbjct: 907 SEEKRPRPSTPAEEDEDDPEQEKEAGEPGRPGTKPPKRDEERGKTQGKHRKSFALDSEGE 966
Query: 71 DPSQSVASQDAQEIIRPRRCKYFDTNSEVEEESEEDEDYIPSEDWKKEIMVGSMFQAEIP 130
+ SQ +S+ +E + E +EE E+ E+ + + + E+ G +++
Sbjct: 967 EASQESSSEKDEE------------DDEEDEEDEDREEAVDTTKKETEVSDGEDEESDSS 1014
Query: 131 VGICRYKENEKVYEND 146
Y +++ END
Sbjct: 1015 SKCSLYADSDG--END 1028
>gi|210031154 zinc finger protein 541 [Homo sapiens]
Length = 1365
Score = 51.6 bits (122), Expect = 1e-06
Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 12/128 (9%)
Query: 224 VWTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFG 283
VWT E R F++ A+ KDF+LI ++T++V +CV +YY+WKK ++D +
Sbjct: 1183 VWTPIEKRLFKKAFYAHKKDFYLIH-KMIQTKTVAQCVEYYYIWKKMIKFD--CGRAPGL 1239
Query: 284 KKKYNLHPGVTDYMDRLLDESESAASSRAPSP---------PPTASNSSNSQSEKEDGTV 334
+K+ P + + + S S P+P S+S N+ S++ +
Sbjct: 1240 EKRVKREPEEVERTEEKVPCSPRERPSHHPTPKLKTKSYRRESILSSSPNAGSKRTPELL 1299
Query: 335 STANQNGV 342
+A G+
Sbjct: 1300 GSAESQGI 1307
>gi|21735415 centromere protein B [Homo sapiens]
Length = 599
Score = 51.2 bits (121), Expect = 1e-06
Identities = 52/186 (27%), Positives = 82/186 (44%), Gaps = 34/186 (18%)
Query: 20 EEDEEEEEEEEEGE---DDEDADNDDNSGCSGEN-------KEENIKDSSGQEDETQSSN 69
EE+EEEEEEEEEGE ++E+ + ++ G GE +EE DS +E+E + S+
Sbjct: 408 EEEEEEEEEEEEGEGEEEEEEGEEEEEEGGEGEELGEEEEVEEEGDVDSDEEEEEDEESS 467
Query: 70 DDPSQ-------------SVASQDAQEIIRPRRCKYF------DTNSEVE---EESEEDE 107
+ + S + AQE + + D++SE E EE +EDE
Sbjct: 468 SEGLEAEDWAQGVVEAGGSFGAYGAQEEAQCPTLHFLEGGEDSDSDSEEEDDEEEDDEDE 527
Query: 108 DYIPSEDWKKEIMVGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKD 167
D E+ E+ V S E K + DD++ +L D V + K+
Sbjct: 528 DDDDDEEDGDEVPVPSF--GEAMAYFAMVKRYLTSFPIDDRVQSHILHLEHDLVHVTRKN 585
Query: 168 ASRRTG 173
+R+ G
Sbjct: 586 HARQAG 591
Score = 50.1 bits (118), Expect = 3e-06
Identities = 44/175 (25%), Positives = 69/175 (39%), Gaps = 32/175 (18%)
Query: 15 TVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDDPSQ 74
T L E EEEEEEEEE E++E ++ E +E + G+E+E + D
Sbjct: 398 TTSLKSEGEEEEEEEEEEEEEEGEGEEEEEEGEEEEEEGGEGEELGEEEEVEEEGD---- 453
Query: 75 SVASQDAQEIIRPRRCKYFDTNSEVEEESEEDEDYIPSEDWKKEIM-VGSMF-----QAE 128
D++ E EE+ E + + +EDW + ++ G F Q E
Sbjct: 454 ------------------VDSDEEEEEDEESSSEGLEAEDWAQGVVEAGGSFGAYGAQEE 495
Query: 129 IPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEKGVEAIPE 183
+ E + ++D + D E ED+ D GDE V + E
Sbjct: 496 AQCPTLHFLEGGEDSDSDSEEEDDEEEDDEDED----DDDDEEDGDEVPVPSFGE 546
>gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo
sapiens]
Length = 2524
Score = 50.8 bits (120), Expect = 2e-06
Identities = 64/252 (25%), Positives = 107/252 (42%), Gaps = 48/252 (19%)
Query: 137 KENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEKGVEAIPEGSHIKDNEQA--- 193
KE EK E +++ + E ED + D S DEK EA+ N Q
Sbjct: 523 KEKEKEAEKEEEKP-EVENDKEDLLKEKTDDTSGEDNDEK--EAVASKGRKTANSQGRRK 579
Query: 194 --LYELVKCNFDTEEALRRLRFNVKAARE--ELSVWTEEECRNFEQGLKAYGKDFHLIQA 249
+ + ++EEA+ + A+ E E S WTEEE ++GL +G+++ I A
Sbjct: 580 GRITRSMANEANSEEAITPQQSAELASMELNESSRWTEEEMETAKKGLLEHGRNWSAI-A 638
Query: 250 NKVRTRSVGECVAFYYMWKKSERYDFFAQQ-------TRFGKKKYNLHP----------- 291
V +++V +C FY+ +KK + D QQ R ++K P
Sbjct: 639 RMVGSKTVSQCKNFYFNYKKRQNLDEILQQHKLKMEKERNARRKKKKAPAAASEEAAFPP 698
Query: 292 ----------GVTDYMDRLLDESES--AASSRAP----SPPPTASNSSNSQSEKEDGTVS 335
GV+ + +++E+E+ A+ + P S P T +NSS+++S T +
Sbjct: 699 VVEDEEMEASGVSGNEEEMVEEAEALHASGNEVPRGECSGPATVNNSSDTESIPSPHTEA 758
Query: 336 TANQNGVSSNGP 347
+ NGP
Sbjct: 759 AKD---TGQNGP 767
Score = 48.9 bits (115), Expect = 7e-06
Identities = 29/114 (25%), Positives = 55/114 (48%), Gaps = 15/114 (13%)
Query: 219 REELSVWTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQ 278
R+ +++W+E+E F + + K+F LI A+ + ++V ECV +YY+ KK+E Y +
Sbjct: 426 RQVMNMWSEQEKETFREKFMQHPKNFGLI-ASFLERKTVAECVLYYYLTKKNENYKSLVR 484
Query: 279 QT--RFGKKKYNLHPGVTDYMDRLLDESESAASSRAPSPPPTASNSSNSQSEKE 330
++ R GK + + + + + P P +S + EKE
Sbjct: 485 RSYRRRGKSQ------------QQQQQQQQQQQQQQQQPMPRSSQEEKDEKEKE 526
Score = 37.4 bits (85), Expect = 0.022
Identities = 24/90 (26%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 17 RLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDDPSQSV 76
R +E+++E+E+E+E E +E+ +N +KE+ +K+ + D+T ++D ++V
Sbjct: 514 RSSQEEKDEKEKEKEAEKEEEKPEVEN------DKEDLLKEKT---DDTSGEDNDEKEAV 564
Query: 77 ASQDAQEIIRPRRCKYFDTNSEVEEESEED 106
AS+ + R K T S E + E+
Sbjct: 565 ASKGRKTANSQGRRKGRITRSMANEANSEE 594
>gi|115529449 upstream binding transcription factor, RNA polymerase
I isoform b [Homo sapiens]
Length = 727
Score = 50.8 bits (120), Expect = 2e-06
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 20 EEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDDPSQSVASQ 79
EEDE++E+E+EE EDDE+ D+ ++ G S E+ E+ + + +E DD +
Sbjct: 645 EEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDE 704
Query: 80 D 80
D
Sbjct: 705 D 705
Score = 50.1 bits (118), Expect = 3e-06
Identities = 20/52 (38%), Positives = 36/52 (69%)
Query: 20 EEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDD 71
E+DEE+E++E+E E++ED +N D+S G++ E + +D S DE + ++D
Sbjct: 642 EDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDED 693
Score = 47.8 bits (112), Expect = 2e-05
Identities = 25/95 (26%), Positives = 48/95 (50%), Gaps = 21/95 (22%)
Query: 14 STVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDDPS 73
+T++ E EE++EE+E+ ED+++ + DD +G S E+ ++ + SS E E N++
Sbjct: 632 TTLQSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEED- 690
Query: 74 QSVASQDAQEIIRPRRCKYFDTNSEVEEESEEDED 108
D + + +E+ +EDED
Sbjct: 691 --------------------DEDEDDDEDDDEDED 705
Score = 44.3 bits (103), Expect = 2e-04
Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 25/105 (23%)
Query: 14 STVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDDPS 73
S L + E EE++EE+ EDDED D ++ +G++ E+ D ++SS++D S
Sbjct: 630 SRTTLQSKSESEEDDEED-EDDEDEDEEEEDDENGDSSEDG-------GDSSESSSEDES 681
Query: 74 QSVASQDAQEIIRPRRCKYFDTNSEVEEESEEDEDYIPSEDWKKE 118
+ D N E +E+ ++DED ED + E
Sbjct: 682 ED-----------------GDENEEDDEDEDDDEDDDEDEDNESE 709
Score = 40.4 bits (93), Expect = 0.003
Identities = 16/62 (25%), Positives = 33/62 (53%)
Query: 20 EEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDDPSQSVASQ 79
EED+E + E+G D ++ ++D S EN+E++ + ++D+ N+ S +S
Sbjct: 657 EEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDNESEGSSSSSS 716
Query: 80 DA 81
+
Sbjct: 717 SS 718
Score = 38.1 bits (87), Expect = 0.013
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 13 GSTVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDD 71
G + EDE E+ +E E EDDED D+D++ +N+ E SS ++ S+ +
Sbjct: 670 GDSSESSSEDESEDGDENE-EDDEDEDDDEDDDEDEDNESEGSSSSSSSSGDSSDSDSN 727
Score = 37.4 bits (85), Expect = 0.022
Identities = 18/59 (30%), Positives = 30/59 (50%)
Query: 11 GYGSTVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSN 69
G S+ E++ E+ +E EE ++DED D DD+ E++ + SS + SN
Sbjct: 669 GGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDNESEGSSSSSSSSGDSSDSDSN 727
Score = 33.9 bits (76), Expect = 0.24
Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 6/60 (10%)
Query: 22 DEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDDPSQSVASQDA 81
D E E+E ED ++ + DD E+++++ D +++E++ S+ S S S D+
Sbjct: 671 DSSESSSEDESEDGDENEEDD------EDEDDDEDDDEDEDNESEGSSSSSSSSGDSSDS 724
Score = 32.3 bits (72), Expect = 0.70
Identities = 14/53 (26%), Positives = 28/53 (52%)
Query: 21 EDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDDPS 73
E E+E E+ E++ED +++D+ E+++ + SS + S+D S
Sbjct: 674 ESSSEDESEDGDENEEDDEDEDDDEDDDEDEDNESEGSSSSSSSSGDSSDSDS 726
>gi|115529451 upstream binding transcription factor, RNA polymerase
I isoform b [Homo sapiens]
Length = 727
Score = 50.8 bits (120), Expect = 2e-06
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 20 EEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDDPSQSVASQ 79
EEDE++E+E+EE EDDE+ D+ ++ G S E+ E+ + + +E DD +
Sbjct: 645 EEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDE 704
Query: 80 D 80
D
Sbjct: 705 D 705
Score = 50.1 bits (118), Expect = 3e-06
Identities = 20/52 (38%), Positives = 36/52 (69%)
Query: 20 EEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDD 71
E+DEE+E++E+E E++ED +N D+S G++ E + +D S DE + ++D
Sbjct: 642 EDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDED 693
Score = 47.8 bits (112), Expect = 2e-05
Identities = 25/95 (26%), Positives = 48/95 (50%), Gaps = 21/95 (22%)
Query: 14 STVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDDPS 73
+T++ E EE++EE+E+ ED+++ + DD +G S E+ ++ + SS E E N++
Sbjct: 632 TTLQSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEED- 690
Query: 74 QSVASQDAQEIIRPRRCKYFDTNSEVEEESEEDED 108
D + + +E+ +EDED
Sbjct: 691 --------------------DEDEDDDEDDDEDED 705
Score = 44.3 bits (103), Expect = 2e-04
Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 25/105 (23%)
Query: 14 STVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDDPS 73
S L + E EE++EE+ EDDED D ++ +G++ E+ D ++SS++D S
Sbjct: 630 SRTTLQSKSESEEDDEED-EDDEDEDEEEEDDENGDSSEDG-------GDSSESSSEDES 681
Query: 74 QSVASQDAQEIIRPRRCKYFDTNSEVEEESEEDEDYIPSEDWKKE 118
+ D N E +E+ ++DED ED + E
Sbjct: 682 ED-----------------GDENEEDDEDEDDDEDDDEDEDNESE 709
Score = 40.4 bits (93), Expect = 0.003
Identities = 16/62 (25%), Positives = 33/62 (53%)
Query: 20 EEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDDPSQSVASQ 79
EED+E + E+G D ++ ++D S EN+E++ + ++D+ N+ S +S
Sbjct: 657 EEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDNESEGSSSSSS 716
Query: 80 DA 81
+
Sbjct: 717 SS 718
Score = 38.1 bits (87), Expect = 0.013
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 13 GSTVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDD 71
G + EDE E+ +E E EDDED D+D++ +N+ E SS ++ S+ +
Sbjct: 670 GDSSESSSEDESEDGDENE-EDDEDEDDDEDDDEDEDNESEGSSSSSSSSGDSSDSDSN 727
Score = 37.4 bits (85), Expect = 0.022
Identities = 18/59 (30%), Positives = 30/59 (50%)
Query: 11 GYGSTVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSN 69
G S+ E++ E+ +E EE ++DED D DD+ E++ + SS + SN
Sbjct: 669 GGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDNESEGSSSSSSSSGDSSDSDSN 727
Score = 33.9 bits (76), Expect = 0.24
Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 6/60 (10%)
Query: 22 DEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDDPSQSVASQDA 81
D E E+E ED ++ + DD E+++++ D +++E++ S+ S S S D+
Sbjct: 671 DSSESSSEDESEDGDENEEDD------EDEDDDEDDDEDEDNESEGSSSSSSSSGDSSDS 724
Score = 32.3 bits (72), Expect = 0.70
Identities = 14/53 (26%), Positives = 28/53 (52%)
Query: 21 EDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDDPS 73
E E+E E+ E++ED +++D+ E+++ + SS + S+D S
Sbjct: 674 ESSSEDESEDGDENEEDDEDEDDDEDDDEDEDNESEGSSSSSSSSGDSSDSDS 726
>gi|7657671 upstream binding transcription factor, RNA polymerase I
isoform a [Homo sapiens]
Length = 764
Score = 50.8 bits (120), Expect = 2e-06
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 20 EEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDDPSQSVASQ 79
EEDE++E+E+EE EDDE+ D+ ++ G S E+ E+ + + +E DD +
Sbjct: 682 EEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDE 741
Query: 80 D 80
D
Sbjct: 742 D 742
Score = 50.1 bits (118), Expect = 3e-06
Identities = 20/52 (38%), Positives = 36/52 (69%)
Query: 20 EEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDD 71
E+DEE+E++E+E E++ED +N D+S G++ E + +D S DE + ++D
Sbjct: 679 EDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDED 730
Score = 47.8 bits (112), Expect = 2e-05
Identities = 25/95 (26%), Positives = 48/95 (50%), Gaps = 21/95 (22%)
Query: 14 STVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDDPS 73
+T++ E EE++EE+E+ ED+++ + DD +G S E+ ++ + SS E E N++
Sbjct: 669 TTLQSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEED- 727
Query: 74 QSVASQDAQEIIRPRRCKYFDTNSEVEEESEEDED 108
D + + +E+ +EDED
Sbjct: 728 --------------------DEDEDDDEDDDEDED 742
Score = 44.3 bits (103), Expect = 2e-04
Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 25/105 (23%)
Query: 14 STVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDDPS 73
S L + E EE++EE+ EDDED D ++ +G++ E+ D ++SS++D S
Sbjct: 667 SRTTLQSKSESEEDDEED-EDDEDEDEEEEDDENGDSSEDG-------GDSSESSSEDES 718
Query: 74 QSVASQDAQEIIRPRRCKYFDTNSEVEEESEEDEDYIPSEDWKKE 118
+ D N E +E+ ++DED ED + E
Sbjct: 719 ED-----------------GDENEEDDEDEDDDEDDDEDEDNESE 746
Score = 40.4 bits (93), Expect = 0.003
Identities = 16/62 (25%), Positives = 33/62 (53%)
Query: 20 EEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDDPSQSVASQ 79
EED+E + E+G D ++ ++D S EN+E++ + ++D+ N+ S +S
Sbjct: 694 EEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDNESEGSSSSSS 753
Query: 80 DA 81
+
Sbjct: 754 SS 755
Score = 38.1 bits (87), Expect = 0.013
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 13 GSTVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDD 71
G + EDE E+ +E E EDDED D+D++ +N+ E SS ++ S+ +
Sbjct: 707 GDSSESSSEDESEDGDENE-EDDEDEDDDEDDDEDEDNESEGSSSSSSSSGDSSDSDSN 764
Score = 37.4 bits (85), Expect = 0.022
Identities = 18/59 (30%), Positives = 30/59 (50%)
Query: 11 GYGSTVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSN 69
G S+ E++ E+ +E EE ++DED D DD+ E++ + SS + SN
Sbjct: 706 GGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDNESEGSSSSSSSSGDSSDSDSN 764
Score = 33.9 bits (76), Expect = 0.24
Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 6/60 (10%)
Query: 22 DEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDDPSQSVASQDA 81
D E E+E ED ++ + DD E+++++ D +++E++ S+ S S S D+
Sbjct: 708 DSSESSSEDESEDGDENEEDD------EDEDDDEDDDEDEDNESEGSSSSSSSSGDSSDS 761
Score = 32.3 bits (72), Expect = 0.70
Identities = 14/53 (26%), Positives = 28/53 (52%)
Query: 21 EDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDDPS 73
E E+E E+ E++ED +++D+ E+++ + SS + S+D S
Sbjct: 711 ESSSEDESEDGDENEEDDEDEDDDEDDDEDEDNESEGSSSSSSSSGDSSDSDS 763
>gi|209977084 REST corepressor 3 isoform c [Homo sapiens]
Length = 449
Score = 50.8 bits (120), Expect = 2e-06
Identities = 51/191 (26%), Positives = 84/191 (43%), Gaps = 28/191 (14%)
Query: 103 SEEDEDYIPSEDWKKEIMVGSMFQAEIPV---GICRYKENEKVYENDDQLLWDPEY-LPE 158
SE + ++ + VG+ +QA IP G +Y + + N L+W P + +P+
Sbjct: 43 SEPESGCSSDDEHDVGMRVGAEYQARIPEFDPGATKYTDKD----NGGMLVWSPYHSIPD 98
Query: 159 DKVIIFLKDASRRTGDEKGVEAIPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAA 218
K+ ++ AI + H + EQAL L + E++L L N
Sbjct: 99 AKLDEYI--------------AIAKEKHGYNVEQALGMLFWHKHNIEKSLADLP-NFTPF 143
Query: 219 REELSVWTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKS-ERYDFFA 277
+E WT E+ FEQ +GK FH IQ + +++ V +YY WKK+ R
Sbjct: 144 PDE---WTVEDKVLFEQAFSFHGKSFHRIQ-QMLPDKTIASLVKYYYSWKKTRSRTSLMD 199
Query: 278 QQTRFGKKKYN 288
+Q R ++N
Sbjct: 200 RQARKLANRHN 210
Score = 35.8 bits (81), Expect = 0.063
Identities = 53/251 (21%), Positives = 106/251 (42%), Gaps = 33/251 (13%)
Query: 94 DTNSEVEEESE---EDEDYIPSEDWKKEIMVGSMFQ-AEIPVGICRYKENEKVYENDDQL 149
D++ +VEE D DY P ++ KKE Q ++I +G Y+ + + +
Sbjct: 213 DSDDDVEETHPMDGNDSDYDPKKEAKKEGNTEQPVQTSKIGLGRREYQSLQHRHHSQRSK 272
Query: 150 LWDPE--YLPEDKVIIFL--KDASRRTGDEKGVEAIPEGSHIKDNEQALYELV-KCNFDT 204
P+ YL ++ V+ +A+ + +E I +++ +Q L K
Sbjct: 273 CRPPKGMYLTQEDVVAVSCSPNAANTILRQLDMELISLKRQVQNAKQVNSALKQKMEGGI 332
Query: 205 EEALRRLRFNVKAAREELSV-WTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAF 263
EE F + ++++ WT EE QG++ YGKDF I A+ + ++VG+ F
Sbjct: 333 EE------FKPPESNQKINARWTTEEQLLAVQGVRKYGKDFQAI-ADVIGNKTVGQVKNF 385
Query: 264 YYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYMDRLLDESESAASSRAPSPPPTASNSS 323
+ + ++++NL + ++ ++ + +S +ASN
Sbjct: 386 FVNY----------------RRRFNLEEVLQEWEAEQGTQASNGDASTLGEETKSASNVP 429
Query: 324 NSQSEKEDGTV 334
+ +S E+ V
Sbjct: 430 SGKSTDEEEEV 440
>gi|209977080 REST corepressor 3 isoform a [Homo sapiens]
Length = 553
Score = 50.8 bits (120), Expect = 2e-06
Identities = 51/191 (26%), Positives = 84/191 (43%), Gaps = 28/191 (14%)
Query: 103 SEEDEDYIPSEDWKKEIMVGSMFQAEIPV---GICRYKENEKVYENDDQLLWDPEY-LPE 158
SE + ++ + VG+ +QA IP G +Y + + N L+W P + +P+
Sbjct: 43 SEPESGCSSDDEHDVGMRVGAEYQARIPEFDPGATKYTDKD----NGGMLVWSPYHSIPD 98
Query: 159 DKVIIFLKDASRRTGDEKGVEAIPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAA 218
K+ ++ AI + H + EQAL L + E++L L N
Sbjct: 99 AKLDEYI--------------AIAKEKHGYNVEQALGMLFWHKHNIEKSLADLP-NFTPF 143
Query: 219 REELSVWTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKS-ERYDFFA 277
+E WT E+ FEQ +GK FH IQ + +++ V +YY WKK+ R
Sbjct: 144 PDE---WTVEDKVLFEQAFSFHGKSFHRIQ-QMLPDKTIASLVKYYYSWKKTRSRTSLMD 199
Query: 278 QQTRFGKKKYN 288
+Q R ++N
Sbjct: 200 RQARKLANRHN 210
Score = 36.2 bits (82), Expect = 0.048
Identities = 53/253 (20%), Positives = 106/253 (41%), Gaps = 33/253 (13%)
Query: 94 DTNSEVEEESE---EDEDYIPSEDWKKEIMVGSMFQ-AEIPVGICRYKENEKVYENDDQL 149
D++ +VEE D DY P ++ KKE Q ++I +G Y+ + + +
Sbjct: 213 DSDDDVEETHPMDGNDSDYDPKKEAKKEGNTEQPVQTSKIGLGRREYQSLQHRHHSQRSK 272
Query: 150 LWDPE--YLPEDKVIIFL--KDASRRTGDEKGVEAIPEGSHIKDNEQALYELV-KCNFDT 204
P+ YL ++ V+ +A+ + +E I +++ +Q L K
Sbjct: 273 CRPPKGMYLTQEDVVAVSCSPNAANTILRQLDMELISLKRQVQNAKQVNSALKQKMEGGI 332
Query: 205 EEALRRLRFNVKAAREELSV-WTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAF 263
EE F + ++++ WT EE QG++ YGKDF I A+ + ++VG+ F
Sbjct: 333 EE------FKPPESNQKINARWTTEEQLLAVQGVRKYGKDFQAI-ADVIGNKTVGQVKNF 385
Query: 264 YYMWKKSERYDFFAQQTRFGKKKYNLHPGVTDYMDRLLDESESAASSRAPSPPPTASNSS 323
+ + ++++NL + ++ ++ + +S +ASN
Sbjct: 386 FVNY----------------RRRFNLEEVLQEWEAEQGTQASNGDASTLGEETKSASNVP 429
Query: 324 NSQSEKEDGTVST 336
+ +S E+ T
Sbjct: 430 SGKSTDEEEEAQT 442
>gi|94681063 bromodomain adjacent to zinc finger domain, 2B [Homo
sapiens]
Length = 2168
Score = 50.8 bits (120), Expect = 2e-06
Identities = 21/64 (32%), Positives = 40/64 (62%)
Query: 21 EDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDDPSQSVASQD 80
EDEEE++EEE+ EDDED ++DD+ S N E + + S ++D+ + ++ S + +
Sbjct: 609 EDEEEDDEEEDEEDDEDDESDDSQSESDSNSESDTEGSEEEDDDDKDQDESDSDTEGEKT 668
Query: 81 AQEI 84
+ ++
Sbjct: 669 SMKL 672
Score = 45.4 bits (106), Expect = 8e-05
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 20 EEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDDPSQSVASQ 79
E+ E+EEE++E ED+ED ++D++ E+ + D+ G E+E +DD Q +
Sbjct: 605 EDSNEDEEEDDEEEDEEDDEDDESDDSQSESDSNSESDTEGSEEE---DDDDKDQDESDS 661
Query: 80 DAQ 82
D +
Sbjct: 662 DTE 664
Score = 40.4 bits (93), Expect = 0.003
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 20 EEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDDPSQSV 76
+E+E+EE++E++ DD +++D NS E EE D Q DE+ S + S+
Sbjct: 615 DEEEDEEDDEDDESDDSQSESDSNSESDTEGSEEEDDDDKDQ-DESDSDTEGEKTSM 670
Score = 40.0 bits (92), Expect = 0.003
Identities = 21/91 (23%), Positives = 37/91 (40%)
Query: 13 GSTVRLPEEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDDP 72
G+ +P + E+ E+E EDDE+ D +D+ ++ + +S + E DD
Sbjct: 593 GTDSDIPSSKDSEDSNEDEEEDDEEEDEEDDEDDESDDSQSESDSNSESDTEGSEEEDDD 652
Query: 73 SQSVASQDAQEIIRPRRCKYFDTNSEVEEES 103
+ D+ K T S V+ S
Sbjct: 653 DKDQDESDSDTEGEKTSMKLNKTTSSVKSPS 683
Score = 33.9 bits (76), Expect = 0.24
Identities = 24/99 (24%), Positives = 48/99 (48%), Gaps = 15/99 (15%)
Query: 20 EEDEEEEEEEEEGEDDEDADNDDNSGCSGENKE--ENIKD--SSGQEDETQS-------- 67
EEDEEEE++ E +D+D+D++ + N+ I D + GQ+ ++
Sbjct: 269 EEDEEEEDQSIEESEDDDSDSESEAQHKSNNQVLLHGISDPKADGQKATEKAQEKRIHQP 328
Query: 68 ---SNDDPSQSVASQDAQEIIRPRRCKYFDTNSEVEEES 103
+++ + S SQ Q + ++ + +S+ +EES
Sbjct: 329 LPLASESQTHSFQSQQKQPQVLSQQLPFIFQSSQAKEES 367
Score = 32.7 bits (73), Expect = 0.54
Identities = 13/52 (25%), Positives = 29/52 (55%)
Query: 34 DDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDDPSQSVASQDAQEII 85
DD+D D+ D+ G + EE+ +D G++ + D+ Q+ + ++ ++ I
Sbjct: 1300 DDDDDDDSDDQGDEDDEDEEDKEDKKGKKTDICEDEDEGDQAASVEELEKQI 1351
Score = 31.2 bits (69), Expect = 1.6
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 20 EEDEEEEEEEEEGEDDEDADNDDNSG---CSGENKEENIKDSSGQEDETQSSNDDPSQSV 76
E+DE+EE++E++ D D++ G S E E+ I+ S Q+ + + D S S+
Sbjct: 1313 EDDEDEEDKEDKKGKKTDICEDEDEGDQAASVEELEKQIEKLSKQQSQYRRKLFDASHSL 1372
Query: 77 AS 78
S
Sbjct: 1373 RS 1374
Score = 30.4 bits (67), Expect = 2.7
Identities = 19/76 (25%), Positives = 31/76 (40%), Gaps = 14/76 (18%)
Query: 33 EDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDDPSQSVASQDAQEIIRPRRCKY 92
E D+D S E+ E+ ++ +EDE +D+ S +
Sbjct: 589 EQFRGTDSDIPSSKDSEDSNEDEEEDDEEEDEEDDEDDESDDSQSES------------- 635
Query: 93 FDTNSEVEEESEEDED 108
D+NSE + E E+ED
Sbjct: 636 -DSNSESDTEGSEEED 650
Score = 28.9 bits (63), Expect = 7.7
Identities = 15/64 (23%), Positives = 33/64 (51%), Gaps = 14/64 (21%)
Query: 51 KEENIKDSSGQEDETQSSNDDPSQSVASQDAQEIIRPRRCKYFDTNSEVEEESEEDEDYI 110
+++ ++ SS + ++ +S+D S+ ++S D+ ++ E+E EED+
Sbjct: 235 RKKAMESSSNSDSDSGTSSDTSSEGISSSDSDDL--------------EEDEEEEDQSIE 280
Query: 111 PSED 114
SED
Sbjct: 281 ESED 284
>gi|17975763 myelin transcription factor 1 [Homo sapiens]
Length = 1121
Score = 50.4 bits (119), Expect = 2e-06
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 8/97 (8%)
Query: 20 EEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQSSNDD-----PSQ 74
EEDEEEEEEEEE E+DE+ + ++ E +EE ++ +E+E + + D +
Sbjct: 259 EEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAAPDVIFQEDTS 318
Query: 75 SVASQDAQEIIRPRRCK---YFDTNSEVEEESEEDED 108
++Q A E+ P + EV + ++DED
Sbjct: 319 HTSAQKAPELRGPESPSPKPEYSVIVEVRSDDDKDED 355
Score = 30.4 bits (67), Expect = 2.7
Identities = 42/210 (20%), Positives = 78/210 (37%), Gaps = 19/210 (9%)
Query: 45 GCSGENKEENIKDSSGQEDETQSSNDDPSQSVASQDAQEIIRPRRCKYFDTNSEVEEESE 104
G + E E+ + +E + SQ + Q ++ K S EE+ E
Sbjct: 204 GAASEEGEKGLFIQPEDAEEVVEVTTERSQDLCPQSLEDAASEESSKQKGILSHEEEDEE 263
Query: 105 EDEDYIPSEDWKKEIMVGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIF 164
E+E+ E+ ++E + E +E E+ E +++ + E P+ +IF
Sbjct: 264 EEEEEEEEEEDEEEEEEEEEEEEE-------EEEEEEEEEEEEEEEEEEEAAPD---VIF 313
Query: 165 LKDASRRTGDEKGVEAIPEGSHIKDNEQALYELVKCNFDTEEALRRLRFNVKAAREELSV 224
+D S + + PE K + E V+ + D +E + V E +
Sbjct: 314 QEDTSHTSAQKAPELRGPESPSPKPEYSVIVE-VRSDDDKDEDTHSRKSTVTDESEMQDM 372
Query: 225 WTEEECRNFEQGLKAYGKDFHLIQANKVRT 254
T EQ + ++A +VRT
Sbjct: 373 MTRGNLGLLEQAI--------ALKAEQVRT 394
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.308 0.128 0.364
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,943,773
Number of Sequences: 37866
Number of extensions: 827644
Number of successful extensions: 24719
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 635
Number of HSP's successfully gapped in prelim test: 344
Number of HSP's that attempted gapping in prelim test: 9131
Number of HSP's gapped (non-prelim): 7091
length of query: 370
length of database: 18,247,518
effective HSP length: 104
effective length of query: 266
effective length of database: 14,309,454
effective search space: 3806314764
effective search space used: 3806314764
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.