Guide to the Human Genome
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Name: TINAG Sequence: fasta or formatted (476aa) NCBI GI: 224586907
Description:

tubulointerstitial nephritis antigen

Referenced in:

Cysteine Proteases
Kidney

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         31           2
 C cysteine            5.0         24           2
 D aspartate           4.2         20           2
 E glutamate           6.5         31           2
 F phenylalanine       4.2         20           2
 G glycine             7.1         34           1
 H histidine           2.3         11           1
 I isoleucine          4.2         20           2
 K lysine              6.3         30           1
 L leucine             5.7         27           2
 M methionine          2.1         10           1
 N asparagine          5.5         26           2
 P proline             4.2         20           2
 Q glutamine           5.3         25           2
 R arginine            5.7         27           1
 S serine              7.6         36           2
 T threonine           5.9         28           2
 V valine              3.6         17           1
 W tryptophan          3.6         17           2
 Y tyrosine            4.6         22           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tubulointerstitial nephritis antigen 
TINAGL1               0.409   tubulointerstitial nephritis antigen-like 1 
CTSB                  0.112   cathepsin B preproprotein 
CTSB                  0.112   cathepsin B preproprotein 
CTSB                  0.112   cathepsin B preproprotein 
CTSB                  0.112   cathepsin B preproprotein 
CTSB                  0.112   cathepsin B preproprotein 
CTSC                  0.101   cathepsin C isoform a preproprotein 
CTSL2                 0.065   cathepsin L2 preproprotein 
CTSZ                  0.063   cathepsin Z preproprotein 
CTSK                  0.059   cathepsin K preproprotein 
CTSH                  0.059   cathepsin H isoform b precursor 
CTSH                  0.059   cathepsin H isoform a preproprotein 
CTSS                  0.056   cathepsin S preproprotein 
CTSL1                 0.053   cathepsin L1 preproprotein 
CTSL1                 0.053   cathepsin L1 preproprotein 
CTSO                  0.048   cathepsin O preproprotein 
CTSW                  0.046   cathepsin W preproprotein 
CTSF                  0.029   cathepsin F 
OTOG                  0.025   PREDICTED: otogelin isoform 1 
OTOG                  0.025   PREDICTED: otogelin isoform 2 
OTOG                  0.025   PREDICTED: otogelin isoform 2 
OTOG                  0.025   PREDICTED: otogelin isoform 1 
OTOG                  0.025   PREDICTED: otogelin isoform 2 
OTOG                  0.025   PREDICTED: otogelin isoform 1 
VWF                   0.023   von Willebrand factor preproprotein 
MUC5AC                0.019   mucin 5AC 
MUC2                  0.019   mucin 2 precursor 
LOC100291118          0.019   PREDICTED: hypothetical protein XP_002347351 
LOC100294420          0.019   PREDICTED: similar to mucin 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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