Guide to the Human Genome
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Name: CTSB Sequence: fasta or formatted (339aa) NCBI GI: 4503139
Description:

cathepsin B preproprotein

Referenced in:

Cysteine Proteases

Other entries for this name:
alt mRNA [339aa] cathepsin B preproprotein
alt mRNA [339aa] cathepsin B preproprotein
alt mRNA [339aa] cathepsin B preproprotein
alt mRNA [339aa] cathepsin B preproprotein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         18           1
 C cysteine            5.0         17           2
 D aspartate           4.7         16           1
 E glutamate           5.9         20           1
 F phenylalanine       3.2         11           2
 G glycine            10.3         35           2
 H histidine           3.2         11           2
 I isoleucine          4.4         15           1
 K lysine              4.4         15           1
 L leucine             6.2         21           2
 M methionine          2.1          7           2
 N asparagine          5.0         17           1
 P proline             5.9         20           2
 Q glutamine           2.9         10           1
 R arginine            4.1         14           1
 S serine              8.0         27           1
 T threonine           4.4         15           2
 V valine              6.2         21           2
 W tryptophan          3.5         12           1
 Y tyrosine            5.0         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cathepsin B preproprotein 
CTSB                  1.000   cathepsin B preproprotein 
CTSB                  1.000   cathepsin B preproprotein 
CTSB                  1.000   cathepsin B preproprotein 
CTSB                  1.000   cathepsin B preproprotein 
TINAGL1               0.187   tubulointerstitial nephritis antigen-like 1 
TINAG                 0.157   tubulointerstitial nephritis antigen 
CTSC                  0.148   cathepsin C isoform a preproprotein 
CTSH                  0.121   cathepsin H isoform b precursor 
CTSH                  0.121   cathepsin H isoform a preproprotein 
CTSS                  0.114   cathepsin S preproprotein 
CTSL1                 0.104   cathepsin L1 preproprotein 
CTSL1                 0.104   cathepsin L1 preproprotein 
CTSL2                 0.102   cathepsin L2 preproprotein 
CTSK                  0.096   cathepsin K preproprotein 
CTSZ                  0.093   cathepsin Z preproprotein 
CTSO                  0.089   cathepsin O preproprotein 
CTSF                  0.089   cathepsin F 
CTSW                  0.068   cathepsin W preproprotein 
LOC440017             0.014   PREDICTED: similar to double homeobox, 4 
LOC728022             0.014   PREDICTED: similar to double homeobox, 4 
LOC100289581          0.014   PREDICTED: hypothetical protein XP_002343082 
LOC440014             0.014   PREDICTED: similar to double homeobox, 4 
LOC399839             0.014   PREDICTED: similar to double homeobox, 4 
LOC440013             0.014   PREDICTED: similar to double homeobox, 4 
LOC653548             0.014   PREDICTED: double homeobox, 4-like 
LOC441056             0.014   PREDICTED: double homeobox, 4-like 
DUX4                  0.014   double homeobox, 4 
LOC728410             0.014   double homeobox, 4-like 
LOC653543             0.014   double homeobox, 4-like 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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