Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 224589077
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|224589077 hypothetical protein LOC285600 isoform 1 [Homo
sapiens]
(1275 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|224589077 hypothetical protein LOC285600 isoform 1 [Homo sapi... 2572 0.0
gi|27734815 hypothetical protein LOC285600 isoform 2 [Homo sapiens] 656 0.0
gi|190194412 thyroid hormone receptor interactor 11 [Homo sapiens] 36 0.21
gi|110349719 titin isoform N2-A [Homo sapiens] 35 0.46
gi|110349717 titin isoform novex-2 [Homo sapiens] 35 0.46
gi|110349713 titin isoform novex-1 [Homo sapiens] 35 0.46
gi|110349715 titin isoform N2-B [Homo sapiens] 35 0.46
gi|13699824 kinesin family member 11 [Homo sapiens] 35 0.46
gi|20357504 dystonin isoform 1eB precursor [Homo sapiens] 34 0.78
gi|41327708 crumbs homolog 1 precursor [Homo sapiens] 34 1.0
gi|115529439 carboxylesterase 8 (putative) [Homo sapiens] 33 1.3
gi|68299759 ecotropic viral integration site 5 [Homo sapiens] 33 1.7
gi|14917115 keratin 31 [Homo sapiens] 33 1.7
gi|10337581 type I hair keratin 3B [Homo sapiens] 33 2.3
gi|62422577 neurobeachin [Homo sapiens] 32 3.0
gi|20336199 ataxia telangiectasia mutated isoform 2 [Homo sapiens] 32 3.9
gi|71902540 ataxia telangiectasia mutated isoform 1 [Homo sapiens] 32 3.9
gi|169218268 PREDICTED: similar to Serine-protein kinase ATM, pa... 32 3.9
gi|5803145 ralA binding protein 1 [Homo sapiens] 32 3.9
gi|24415404 MDN1, midasin homolog [Homo sapiens] 32 3.9
gi|169208018 PREDICTED: similar to Golgin subfamily A member 8-l... 31 6.6
gi|113425121 PREDICTED: similar to Golgin subfamily A member 8-l... 31 6.6
gi|194018501 C-type lectin domain family 12, member B isoform 1 ... 31 6.6
gi|194018499 C-type lectin domain family 12, member B isoform 2 ... 31 6.6
gi|58331179 KIAA1688 protein [Homo sapiens] 31 6.6
gi|169208042 PREDICTED: similar to Golgin subfamily A member 8-l... 31 8.6
gi|113425145 PREDICTED: similar to Golgin subfamily A member 8-l... 31 8.6
gi|169208038 PREDICTED: similar to Golgin subfamily A member 8-l... 31 8.6
gi|113425137 PREDICTED: similar to Golgin subfamily A member 8-l... 31 8.6
>gi|224589077 hypothetical protein LOC285600 isoform 1 [Homo sapiens]
Length = 1275
Score = 2572 bits (6667), Expect = 0.0
Identities = 1275/1275 (100%), Positives = 1275/1275 (100%)
Query: 1 MDWDDEYSHNSFDLHCLLNSFPGDLEFEQIFSDIDEKIEQNAASIKHCIKEIQSEINKQC 60
MDWDDEYSHNSFDLHCLLNSFPGDLEFEQIFSDIDEKIEQNAASIKHCIKEIQSEINKQC
Sbjct: 1 MDWDDEYSHNSFDLHCLLNSFPGDLEFEQIFSDIDEKIEQNAASIKHCIKEIQSEINKQC 60
Query: 61 PGVQLQTTTDCFEWLTNYNYSTSESSFISHGDLIKFFKTLQDLLKNEQNQEEMTLDLLWD 120
PGVQLQTTTDCFEWLTNYNYSTSESSFISHGDLIKFFKTLQDLLKNEQNQEEMTLDLLWD
Sbjct: 61 PGVQLQTTTDCFEWLTNYNYSTSESSFISHGDLIKFFKTLQDLLKNEQNQEEMTLDLLWD 120
Query: 121 LSCHSSVSFPSTLSGTSFHFLSRTSLHSVEDNSSMDVKSMWDDIRLHLRRFLVSKLQSHN 180
LSCHSSVSFPSTLSGTSFHFLSRTSLHSVEDNSSMDVKSMWDDIRLHLRRFLVSKLQSHN
Sbjct: 121 LSCHSSVSFPSTLSGTSFHFLSRTSLHSVEDNSSMDVKSMWDDIRLHLRRFLVSKLQSHN 180
Query: 181 EINNSQQKILLKKQCLQQLLFLYPESEVIIKYQNIQNKLLANLLWNCFPSYNRDSNLDVI 240
EINNSQQKILLKKQCLQQLLFLYPESEVIIKYQNIQNKLLANLLWNCFPSYNRDSNLDVI
Sbjct: 181 EINNSQQKILLKKQCLQQLLFLYPESEVIIKYQNIQNKLLANLLWNCFPSYNRDSNLDVI 240
Query: 241 AHGYQSTMLKLYSVIKEDFNTLCEILAPSSMVKFIKETYLDTVTEEMAKFLENFCELQFR 300
AHGYQSTMLKLYSVIKEDFNTLCEILAPSSMVKFIKETYLDTVTEEMAKFLENFCELQFR
Sbjct: 241 AHGYQSTMLKLYSVIKEDFNTLCEILAPSSMVKFIKETYLDTVTEEMAKFLENFCELQFR 300
Query: 301 ENAVRVVKTSKSSSKHRGAVHALVTTECPQKGRNFSLPLDKVEFLSQLIKSFMKLEKGVQ 360
ENAVRVVKTSKSSSKHRGAVHALVTTECPQKGRNFSLPLDKVEFLSQLIKSFMKLEKGVQ
Sbjct: 301 ENAVRVVKTSKSSSKHRGAVHALVTTECPQKGRNFSLPLDKVEFLSQLIKSFMKLEKGVQ 360
Query: 361 ELFDEILLSLKITRDTSGILEKSDREVVMEKPRANETNIPSEQSLPGKEATLLDFGWRSA 420
ELFDEILLSLKITRDTSGILEKSDREVVMEKPRANETNIPSEQSLPGKEATLLDFGWRSA
Sbjct: 361 ELFDEILLSLKITRDTSGILEKSDREVVMEKPRANETNIPSEQSLPGKEATLLDFGWRSA 420
Query: 421 FKEVSLPMAHCVVTAIEGFSTKILQQEQNERSSAVSYAMNLVNVQQVWQDSHMFPEEEQP 480
FKEVSLPMAHCVVTAIEGFSTKILQQEQNERSSAVSYAMNLVNVQQVWQDSHMFPEEEQP
Sbjct: 421 FKEVSLPMAHCVVTAIEGFSTKILQQEQNERSSAVSYAMNLVNVQQVWQDSHMFPEEEQP 480
Query: 481 KKIGKFCSDIMEKLDTMLPLALACRDDSFQEIRANLVEACCKVATAVLQRLQERAKEVPS 540
KKIGKFCSDIMEKLDTMLPLALACRDDSFQEIRANLVEACCKVATAVLQRLQERAKEVPS
Sbjct: 481 KKIGKFCSDIMEKLDTMLPLALACRDDSFQEIRANLVEACCKVATAVLQRLQERAKEVPS 540
Query: 541 KAPLKNLHTYLSTAVYVFQHFKRYDNLMKEMTKKPIFLVLVQRYQEFINTLQFQVTNYCV 600
KAPLKNLHTYLSTAVYVFQHFKRYDNLMKEMTKKPIFLVLVQRYQEFINTLQFQVTNYCV
Sbjct: 541 KAPLKNLHTYLSTAVYVFQHFKRYDNLMKEMTKKPIFLVLVQRYQEFINTLQFQVTNYCV 600
Query: 601 RVCATSILQDAESHHWDDYKAFYEGERCSFSIQMWHYFCWSLHYDLWTILPPKLAQEILV 660
RVCATSILQDAESHHWDDYKAFYEGERCSFSIQMWHYFCWSLHYDLWTILPPKLAQEILV
Sbjct: 601 RVCATSILQDAESHHWDDYKAFYEGERCSFSIQMWHYFCWSLHYDLWTILPPKLAQEILV 660
Query: 661 EVLEKSLSLLASRYARAHPSRKRTPQLRLDVTTILICTENMLWSVCTSVQKLLNPHQHTD 720
EVLEKSLSLLASRYARAHPSRKRTPQLRLDVTTILICTENMLWSVCTSVQKLLNPHQHTD
Sbjct: 661 EVLEKSLSLLASRYARAHPSRKRTPQLRLDVTTILICTENMLWSVCTSVQKLLNPHQHTD 720
Query: 721 DKIFKIHTHCNNLFTTLVILTSPLTELYKTFQHGLDESASDSLKSFFKQPLYWVSCISHF 780
DKIFKIHTHCNNLFTTLVILTSPLTELYKTFQHGLDESASDSLKSFFKQPLYWVSCISHF
Sbjct: 721 DKIFKIHTHCNNLFTTLVILTSPLTELYKTFQHGLDESASDSLKSFFKQPLYWVSCISHF 780
Query: 781 YPSLLRTPSAGGLKAEGQLKLLLSQPRCNWNLLLETLLHHDGLLLRILLKSSKQVSDTEN 840
YPSLLRTPSAGGLKAEGQLKLLLSQPRCNWNLLLETLLHHDGLLLRILLKSSKQVSDTEN
Sbjct: 781 YPSLLRTPSAGGLKAEGQLKLLLSQPRCNWNLLLETLLHHDGLLLRILLKSSKQVSDTEN 840
Query: 841 NLNQGPSLMEAIFKILYHCSFSPQTFANVFVSYMEEEQLWDFLYNIPVSTCVEYELEVIR 900
NLNQGPSLMEAIFKILYHCSFSPQTFANVFVSYMEEEQLWDFLYNIPVSTCVEYELEVIR
Sbjct: 841 NLNQGPSLMEAIFKILYHCSFSPQTFANVFVSYMEEEQLWDFLYNIPVSTCVEYELEVIR 900
Query: 901 CLRLALTDAIKDTVQQIVSVMSSRRNCETNLNKHIVPDCLLESMPKEWNYSPKETNRKES 960
CLRLALTDAIKDTVQQIVSVMSSRRNCETNLNKHIVPDCLLESMPKEWNYSPKETNRKES
Sbjct: 901 CLRLALTDAIKDTVQQIVSVMSSRRNCETNLNKHIVPDCLLESMPKEWNYSPKETNRKES 960
Query: 961 CKSFTRLTAQAVSIVISKLPTVIACLPPPVKYFFFLSERKMSKKFVELKKAGLLVWNLIV 1020
CKSFTRLTAQAVSIVISKLPTVIACLPPPVKYFFFLSERKMSKKFVELKKAGLLVWNLIV
Sbjct: 961 CKSFTRLTAQAVSIVISKLPTVIACLPPPVKYFFFLSERKMSKKFVELKKAGLLVWNLIV 1020
Query: 1021 IICRIFEDGNTVELLTGASLDRWSKEKLGLICMCLKSIMGDQTSIHNQMIQKVIQSIEQQ 1080
IICRIFEDGNTVELLTGASLDRWSKEKLGLICMCLKSIMGDQTSIHNQMIQKVIQSIEQQ
Sbjct: 1021 IICRIFEDGNTVELLTGASLDRWSKEKLGLICMCLKSIMGDQTSIHNQMIQKVIQSIEQQ 1080
Query: 1081 KPNWIERQLLKARKLSTECAFMTIEKSTALQEGDVALELTEQKINTMVLDLCHKPGGREY 1140
KPNWIERQLLKARKLSTECAFMTIEKSTALQEGDVALELTEQKINTMVLDLCHKPGGREY
Sbjct: 1081 KPNWIERQLLKARKLSTECAFMTIEKSTALQEGDVALELTEQKINTMVLDLCHKPGGREY 1140
Query: 1141 LRQIYHIMQLNEEYLKEQLFSMNSSEEKPLPIRPLKTTLRSIEDQPSAFNPFHVYKAFSE 1200
LRQIYHIMQLNEEYLKEQLFSMNSSEEKPLPIRPLKTTLRSIEDQPSAFNPFHVYKAFSE
Sbjct: 1141 LRQIYHIMQLNEEYLKEQLFSMNSSEEKPLPIRPLKTTLRSIEDQPSAFNPFHVYKAFSE 1200
Query: 1201 NMLDQVSITKWNWNWAKLLPNYLRLDKMTFSVLLKNRWEMKKDETLEEEEKAILEHLKQI 1260
NMLDQVSITKWNWNWAKLLPNYLRLDKMTFSVLLKNRWEMKKDETLEEEEKAILEHLKQI
Sbjct: 1201 NMLDQVSITKWNWNWAKLLPNYLRLDKMTFSVLLKNRWEMKKDETLEEEEKAILEHLKQI 1260
Query: 1261 CTPQNSSASDNIEEQ 1275
CTPQNSSASDNIEEQ
Sbjct: 1261 CTPQNSSASDNIEEQ 1275
>gi|27734815 hypothetical protein LOC285600 isoform 2 [Homo sapiens]
Length = 324
Score = 656 bits (1693), Expect = 0.0
Identities = 323/323 (100%), Positives = 323/323 (100%)
Query: 1 MDWDDEYSHNSFDLHCLLNSFPGDLEFEQIFSDIDEKIEQNAASIKHCIKEIQSEINKQC 60
MDWDDEYSHNSFDLHCLLNSFPGDLEFEQIFSDIDEKIEQNAASIKHCIKEIQSEINKQC
Sbjct: 1 MDWDDEYSHNSFDLHCLLNSFPGDLEFEQIFSDIDEKIEQNAASIKHCIKEIQSEINKQC 60
Query: 61 PGVQLQTTTDCFEWLTNYNYSTSESSFISHGDLIKFFKTLQDLLKNEQNQEEMTLDLLWD 120
PGVQLQTTTDCFEWLTNYNYSTSESSFISHGDLIKFFKTLQDLLKNEQNQEEMTLDLLWD
Sbjct: 61 PGVQLQTTTDCFEWLTNYNYSTSESSFISHGDLIKFFKTLQDLLKNEQNQEEMTLDLLWD 120
Query: 121 LSCHSSVSFPSTLSGTSFHFLSRTSLHSVEDNSSMDVKSMWDDIRLHLRRFLVSKLQSHN 180
LSCHSSVSFPSTLSGTSFHFLSRTSLHSVEDNSSMDVKSMWDDIRLHLRRFLVSKLQSHN
Sbjct: 121 LSCHSSVSFPSTLSGTSFHFLSRTSLHSVEDNSSMDVKSMWDDIRLHLRRFLVSKLQSHN 180
Query: 181 EINNSQQKILLKKQCLQQLLFLYPESEVIIKYQNIQNKLLANLLWNCFPSYNRDSNLDVI 240
EINNSQQKILLKKQCLQQLLFLYPESEVIIKYQNIQNKLLANLLWNCFPSYNRDSNLDVI
Sbjct: 181 EINNSQQKILLKKQCLQQLLFLYPESEVIIKYQNIQNKLLANLLWNCFPSYNRDSNLDVI 240
Query: 241 AHGYQSTMLKLYSVIKEDFNTLCEILAPSSMVKFIKETYLDTVTEEMAKFLENFCELQFR 300
AHGYQSTMLKLYSVIKEDFNTLCEILAPSSMVKFIKETYLDTVTEEMAKFLENFCELQFR
Sbjct: 241 AHGYQSTMLKLYSVIKEDFNTLCEILAPSSMVKFIKETYLDTVTEEMAKFLENFCELQFR 300
Query: 301 ENAVRVVKTSKSSSKHRGAVHAL 323
ENAVRVVKTSKSSSKHRGAVHAL
Sbjct: 301 ENAVRVVKTSKSSSKHRGAVHAL 323
>gi|190194412 thyroid hormone receptor interactor 11 [Homo sapiens]
Length = 1979
Score = 36.2 bits (82), Expect = 0.21
Identities = 80/397 (20%), Positives = 150/397 (37%), Gaps = 75/397 (18%)
Query: 26 EFEQIFSDIDEKIEQNAASIKHCIKEIQSEINKQCPGVQLQTTTDCFEWLTNYNYSTSES 85
E E + ++I+E QN + KH I I+ +++KQ
Sbjct: 489 EKETLIAEIEELDRQNQEATKHMIL-IKDQLSKQ---------------------QNEGD 526
Query: 86 SFISHGDLIKFFKTLQDLLKNEQNQEEMTLDLLWDLSCHSSVSFPSTLSGTSFHFLSRTS 145
S IS K + L D K E+ +D+ +L S ++ H +
Sbjct: 527 SIIS-----KLKQDLNDEKKRVHQLEDDKMDITKELDVQKEKLIQSEVALNDLHLTKQKL 581
Query: 146 LHSVED---------NSSMDVKSMWDDIRLHLR-------RFLVSKLQSHNEINNSQQKI 189
VE+ S++ ++ +++ H+R R +QS N+ +NS K
Sbjct: 582 EDKVENLVDQLNKSQESNVSIQKENLELKEHIRQNEEELSRIRNELMQSLNQDSNSNFKD 641
Query: 190 LLKKQCLQQLLFLYPESEVIIKYQNIQNKLLANLLWNCFPSYNRDSNLDVIAHGYQSTML 249
L K+ E+EV NL N + NL +A +
Sbjct: 642 TLLKE---------REAEV------------RNLKQNLSELEQLNENLKKVAFDVKMENE 680
Query: 250 KLYSVIKEDFNTLCEILAPSSMVKFIKETYLDTVTEEMAKFLENFCELQFR--ENAVRVV 307
KL ++ + L E LA ++ + K T ++T+ E + C + R E A +
Sbjct: 681 KLVLACEDVRHQLEECLAGNNQLSLEKNTIVETLKMEKGEIEAELCWAKKRLLEEANKYE 740
Query: 308 KTSKSSSKHRGAVHALVTTECPQKGRNFSLPLD--KVEFLSQLIKSFMKLEKGVQELFDE 365
KT + S R + T Q + L+ K +++L K+ +++ +E D
Sbjct: 741 KTIEELSNARN-----LNTSALQLEHEHLIKLNQKKDMEIAELKKNIEQMDTDHKETKDV 795
Query: 366 ILLSLKITRDTSGILEKSDREVVMEKPRANETNIPSE 402
+ SL+ + + ++ K +E+ +EK + + + E
Sbjct: 796 LSSSLEEQKQLTQLINK--KEIFIEKLKERSSKLQEE 830
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 35.0 bits (79), Expect = 0.46
Identities = 30/99 (30%), Positives = 44/99 (44%), Gaps = 13/99 (13%)
Query: 239 VIAHGYQSTMLKLYSVIKEDFNTLCEILAPSSMVKFIKE-TYLDTVTEEMAKFLENFCEL 297
++ H +K Y+ +DF T C + V+F++ T L +EMA+F CEL
Sbjct: 12341 LVIHDCTPEDIKTYTCDAKDFKTSCNLNVVPPHVEFLRPLTDLQVREKEMARF---ECEL 12397
Query: 298 QFRENA--------VRVVKTSKSSSKHRGAVHALVTTEC 328
RENA + K K +GAV LV +C
Sbjct: 12398 S-RENAKVKWFKDGAEIKKGKKYDIISKGAVRILVINKC 12435
>gi|110349717 titin isoform novex-2 [Homo sapiens]
Length = 27118
Score = 35.0 bits (79), Expect = 0.46
Identities = 30/99 (30%), Positives = 44/99 (44%), Gaps = 13/99 (13%)
Query: 239 VIAHGYQSTMLKLYSVIKEDFNTLCEILAPSSMVKFIKE-TYLDTVTEEMAKFLENFCEL 297
++ H +K Y+ +DF T C + V+F++ T L +EMA+F CEL
Sbjct: 6036 LVIHDCTPEDIKTYTCDAKDFKTSCNLNVVPPHVEFLRPLTDLQVREKEMARF---ECEL 6092
Query: 298 QFRENA--------VRVVKTSKSSSKHRGAVHALVTTEC 328
RENA + K K +GAV LV +C
Sbjct: 6093 S-RENAKVKWFKDGAEIKKGKKYDIISKGAVRILVINKC 6130
>gi|110349713 titin isoform novex-1 [Homo sapiens]
Length = 27051
Score = 35.0 bits (79), Expect = 0.46
Identities = 30/99 (30%), Positives = 44/99 (44%), Gaps = 13/99 (13%)
Query: 239 VIAHGYQSTMLKLYSVIKEDFNTLCEILAPSSMVKFIKE-TYLDTVTEEMAKFLENFCEL 297
++ H +K Y+ +DF T C + V+F++ T L +EMA+F CEL
Sbjct: 5969 LVIHDCTPEDIKTYTCDAKDFKTSCNLNVVPPHVEFLRPLTDLQVREKEMARF---ECEL 6025
Query: 298 QFRENA--------VRVVKTSKSSSKHRGAVHALVTTEC 328
RENA + K K +GAV LV +C
Sbjct: 6026 S-RENAKVKWFKDGAEIKKGKKYDIISKGAVRILVINKC 6063
>gi|110349715 titin isoform N2-B [Homo sapiens]
Length = 26926
Score = 35.0 bits (79), Expect = 0.46
Identities = 30/99 (30%), Positives = 44/99 (44%), Gaps = 13/99 (13%)
Query: 239 VIAHGYQSTMLKLYSVIKEDFNTLCEILAPSSMVKFIKE-TYLDTVTEEMAKFLENFCEL 297
++ H +K Y+ +DF T C + V+F++ T L +EMA+F CEL
Sbjct: 5844 LVIHDCTPEDIKTYTCDAKDFKTSCNLNVVPPHVEFLRPLTDLQVREKEMARF---ECEL 5900
Query: 298 QFRENA--------VRVVKTSKSSSKHRGAVHALVTTEC 328
RENA + K K +GAV LV +C
Sbjct: 5901 S-RENAKVKWFKDGAEIKKGKKYDIISKGAVRILVINKC 5938
>gi|13699824 kinesin family member 11 [Homo sapiens]
Length = 1056
Score = 35.0 bits (79), Expect = 0.46
Identities = 57/275 (20%), Positives = 115/275 (41%), Gaps = 37/275 (13%)
Query: 35 DEKIEQNAASIKHCIKEIQSEINKQCPGVQLQTTTDCFEWLTNYNYSTSESSFISHGDLI 94
+EK+ A+ + + ++E +++ L + D + + +N +E+ I +L
Sbjct: 489 EEKLHDAASKLLNTVEETTKDVSG------LHSKLDRKKAVDQHN---AEAQDIFGKNLN 539
Query: 95 KFFKTLQDLLKNEQNQEEMTLDL---LWDLSCHSSVSFPSTLSGTSFHFLSRTSLHSVED 151
F +++L+K+ ++++ L++ L+ SSVS T++ + SL S+ +
Sbjct: 540 SLFNNMEELIKDGSSKQKAMLEVHKTLFGNLLSSSVSALDTITTVALG-----SLTSIPE 594
Query: 152 NSSMDVKSMWDDIRLHLRRFLVSKLQSHNEINNSQQKILLKKQCLQQL-LFLYPESEVII 210
N S V +++ I SK IN +LK L L + L P I+
Sbjct: 595 NVSTHVSQIFNMILKEQSLAAESKTVLQELIN------VLKTDLLSSLEMILSPTVVSIL 648
Query: 211 KYQNIQNKLLANLLWNCFPSYNRDSNLDVIAHGYQSTMLKLYSVIKEDFNTLCEILAPSS 270
K + + L ++ LD G+ S + ++E NT+C ++
Sbjct: 649 KINSQLKHIFKTSLTVADKIEDQKKELD----GFLSILCNNLHELQE--NTICSLVESQK 702
Query: 271 M-------VKFIKETYLDTVTEEMAKFLENFCELQ 298
+K IK+T+ + + M + E FC L+
Sbjct: 703 QCGNLTEDLKTIKQTHSQELCKLMNLWTERFCALE 737
>gi|20357504 dystonin isoform 1eB precursor [Homo sapiens]
Length = 3062
Score = 34.3 bits (77), Expect = 0.78
Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 18/194 (9%)
Query: 11 SFDLHCLLNSFPGDLEFEQIFSDIDEKIEQNAASIKHCIKEIQ----SEINKQCPGVQLQ 66
S D+ + S+ G+ FE+ F+D EK +KHC K I+ ++ N+ P L
Sbjct: 2613 SDDITSDITSWEGNTHFEESFTDGPEKELDLFTYLKHCAKNIKAKDVAKPNEDVPSHVLI 2672
Query: 67 TTTDCFEWLTNYNYSTSESSFISHGDLIKFFKTLQDLLK-NEQNQEEMTLDLLWDLSCHS 125
T E L +T E S + D L D+++ N+ +E ++S +
Sbjct: 2673 TAPPMKEHLQLGVNNTKEKSTSTQKD-----SPLNDMIQSNDLCSKESISGGGTEISQFT 2727
Query: 126 SVSFPSTLSGTSFHFLSRTSLHSVEDNSSMDVKSMWDDIRLHLRRFLVSKLQSHNEINNS 185
S +TLS LSR + V N + + + + ++ S EINN
Sbjct: 2728 PESIEATLS-----ILSRKHVEDVGKNDFLQSERCANGLGNDNSSNTLNTDYSFLEINNK 2782
Query: 186 QQKI---LLKKQCL 196
+++I L K+Q L
Sbjct: 2783 KERIEQQLPKEQAL 2796
>gi|41327708 crumbs homolog 1 precursor [Homo sapiens]
Length = 1406
Score = 33.9 bits (76), Expect = 1.0
Identities = 43/171 (25%), Positives = 71/171 (41%), Gaps = 27/171 (15%)
Query: 60 CP-GVQLQTTTDCFEWLTN--YNYSTSESSFISHGDL------IKFFKTLQD----LLKN 106
CP G Q Q FE + N +N + + F S+G++ I F +D +L
Sbjct: 933 CPHGAQCQPVLQGFECIANAVFNGQSGQILFRSNGNITRELTNITFGFRTRDANVIILHA 992
Query: 107 EQNQEEMTLDLLWDLSCHSSVSFPSTLSGTSFHFLSRTSLHSVEDNSSMDVKSMWDDIRL 166
E+ E + ++S S F SG SF+ LS TSL SV D + W ++ L
Sbjct: 993 EKEPEFL------NISIQDSRLFFQLQSGNSFYMLSLTSLQSVNDGT-------WHEVTL 1039
Query: 167 HLRRFLVSKLQSHNEINNSQQKILLKKQCLQQLLFLYPESEVIIKYQNIQN 217
+ L + E++N + + L FL +++ + + I N
Sbjct: 1040 SMTDPLSQTSRWQMEVDN-ETPFVTSTIATGSLNFLKDNTDIYVGDRAIDN 1089
>gi|115529439 carboxylesterase 8 (putative) [Homo sapiens]
Length = 491
Score = 33.5 bits (75), Expect = 1.3
Identities = 27/100 (27%), Positives = 43/100 (43%), Gaps = 5/100 (5%)
Query: 223 LLWNCFPSYNR----DSNLDVIAHGYQSTMLKLYSVIKEDFNTLCEILAPSSMVKFIKET 278
++W+ P + D L ++ G S++ L V +FN L V + E
Sbjct: 314 IIWSMSPVVDGVVIPDDPLVLLTQGKVSSVPYLLGVNNLEFNWLLPYNITKEQVPLVVEE 373
Query: 279 YLDTVTEEMAKFLENFCELQFRENAVRVVKTSKSSSKHRG 318
YLD V E K L N + ++A V T +++ HRG
Sbjct: 374 YLDNVNEHDWKMLRNRM-MDIVQDATFVYATLQTAHYHRG 412
>gi|68299759 ecotropic viral integration site 5 [Homo sapiens]
Length = 810
Score = 33.1 bits (74), Expect = 1.7
Identities = 51/239 (21%), Positives = 100/239 (41%), Gaps = 22/239 (9%)
Query: 28 EQIFSD-IDEKIEQNAASIKHCIKEIQSEINKQC--PGVQLQTTTDCFEWLTNYNYSTSE 84
+Q+ +D + EK+ + +K+ + S++ Q P L TT+ L+ S S
Sbjct: 16 KQVATDKVAEKLSSTLSWVKNTVSHTVSQMASQVASPSTSLHTTSSSTT-LSTPALSPSS 74
Query: 85 SSFISHGDLIKFFKTLQDLLKNEQNQEEMTLDLLWDLSCHSSVSFPSTLSGTSFHFLSRT 144
S +S DL +LL + Q + L D SV+ SG+S S
Sbjct: 75 PSQLSPDDL--------ELLAKLEEQNRL---LETDSKSLRSVNGSRRNSGSSLVSSSSA 123
Query: 145 S--LHSVEDNSSM---DVKSMWDDIRLHLRRFLVSKLQSHNEINNSQQKILLKKQCLQQL 199
S L +E++S + + + W+D+R + + K H I + + I+ + C Q
Sbjct: 124 SSNLSHLEEDSWILWGRIVNEWEDVRKKKEKQV--KELVHKGIPHHFRAIVWQLLCSAQS 181
Query: 200 LFLYPESEVIIKYQNIQNKLLANLLWNCFPSYNRDSNLDVIAHGYQSTMLKLYSVIKED 258
+ + + ++K + KL+ + +P +N D + ++K YS++ +
Sbjct: 182 MPIKDQYSELLKMTSPCEKLIRRDIARTYPEHNFFKEKDSLGQEVLFNVMKAYSLVDRE 240
>gi|14917115 keratin 31 [Homo sapiens]
Length = 416
Score = 33.1 bits (74), Expect = 1.7
Identities = 53/243 (21%), Positives = 100/243 (41%), Gaps = 21/243 (8%)
Query: 181 EINNSQQKILLKKQCLQQLLFLYPESEVIIK-YQNIQNKLLANLLWNCFPSYNRDSNLDV 239
E +N++ + L++++ QQ L P + K + +Q K+L N D N +
Sbjct: 78 ERDNAELENLIRERSQQQEPLLCPSYQSYFKTIEELQQKILCTKSENARLVVQID-NAKL 136
Query: 240 IAHGYQS---TMLKLYSVIKEDFNTLCEILAPSSMVKFIKETYLDTVTEEMAKFLENF-- 294
A +++ T L L +++ D N L IL ++ K E ++++ EE+ N
Sbjct: 137 AADDFRTKYQTELSLRQLVESDINGLRRILDELTLCKSDLEAQVESLKEELLCLKSNHEQ 196
Query: 295 ------CELQFREN----AVRVVKTSKSSSKHRGAVHALVTTECPQKGRNFSLPLDKVEF 344
C+L R N A V ++ ++ R ALV T + + F+ + E
Sbjct: 197 EVNTLRCQLGDRLNVEVDAAPTVDLNRVLNETRSQYEALVETNRREVEQWFTTQTE--EL 254
Query: 345 LSQLIKSFMKLEKGVQELFD--EILLSLKITRDTSGILEKSDREVVMEKPRANETNIPSE 402
Q++ S +L+ E+ + + +L+I L S + E + +
Sbjct: 255 NKQVVSSSEQLQSYQAEIIELRRTVNALEIELQAQHNLRDSLENTLTESEARYSSQLSQV 314
Query: 403 QSL 405
QSL
Sbjct: 315 QSL 317
>gi|10337581 type I hair keratin 3B [Homo sapiens]
Length = 404
Score = 32.7 bits (73), Expect = 2.3
Identities = 51/243 (20%), Positives = 102/243 (41%), Gaps = 21/243 (8%)
Query: 181 EINNSQQKILLKKQCLQQLLFLYPESEVIIK-YQNIQNKLLANLLWNCFPSYNRDSNLDV 239
E +N++ + L++++ QQ L P + K + +Q K+L + N D N +
Sbjct: 78 ERDNAELENLIRERSQQQEPLLCPSYQSYFKTIEELQQKILCSKSENARLVVQID-NAKL 136
Query: 240 IAHGYQS---TMLKLYSVIKEDFNTLCEILAPSSMVKFIKETYLDTVTEEMAKFLENF-- 294
A +++ T L +++ D N+L IL ++ + E ++++ EE+ +N
Sbjct: 137 AADDFRTKYQTEQSLRQLVESDINSLRRILDELTLCRSDLEAQMESLKEELLSLKQNHEQ 196
Query: 295 ------CELQFREN----AVRVVKTSKSSSKHRGAVHALVTTECPQKGRNFSLPLDKVEF 344
C+L R N A V ++ ++ R ALV T + + F+ + E
Sbjct: 197 EVNTLRCQLGDRLNVEVDAAPAVDLNQVLNETRNQYEALVETNRREVEQWFATQTE--EL 254
Query: 345 LSQLIKSFMKLEKGVQELFD--EILLSLKITRDTSGILEKSDREVVMEKPRANETNIPSE 402
Q++ S +L+ E+ + + +L+I L S + E + +
Sbjct: 255 NKQVVSSSEQLQSYQAEIIELRRTVNALEIELQAQHNLRYSLENTLTESEARYSSQLSQV 314
Query: 403 QSL 405
QSL
Sbjct: 315 QSL 317
>gi|62422577 neurobeachin [Homo sapiens]
Length = 2946
Score = 32.3 bits (72), Expect = 3.0
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 184 NSQQKILLKKQCLQQLLFLYPESEVIIKYQN-IQNKLLANLLWNCFPSYNRDSNLDVIAH 242
N+ +IL ++ C Q + +PE + +K QN + K++A LL N PS + L +
Sbjct: 811 NTLYEILTEQVCTQVVHKPHPEPDSTVKIQNPMILKVVATLLKNSTPS----AELMEVRR 866
Query: 243 GYQSTMLKLYSVIKEDFNTLCE 264
+ S M+KL+S +E+ L +
Sbjct: 867 LFLSDMIKLFSNSRENRRCLLQ 888
>gi|20336199 ataxia telangiectasia mutated isoform 2 [Homo sapiens]
Length = 1708
Score = 32.0 bits (71), Expect = 3.9
Identities = 35/157 (22%), Positives = 60/157 (38%), Gaps = 18/157 (11%)
Query: 644 YDLWTILPPKLAQEILVEVLEK-SLSLLASRYARAHPSRKRTPQLRLDVTTILICTENML 702
YDL T +P Q +++ L+ L + S Y + + L+ NM
Sbjct: 701 YDLETAIPSSTRQAGIIQALQNLGLCHILSVYLKGLDYENKDWCPELEELHYQAAWRNMQ 760
Query: 703 WSVCTSVQKLLNPHQHTDDKIFKIHTHCNNLFTTLVILTSPLTELYKTFQHGLDESASDS 762
W CTSV K + + + +L+ L L + TF L +
Sbjct: 761 WDHCTSVSKEVEGTSYHE-----------SLYNALQSLRD---REFSTFYESLKYARVKE 806
Query: 763 LKSFFKQPLYWVSCISHFYPSLLRTPSAGGLKAEGQL 799
++ K+ L + YP+L R + G L++ G+L
Sbjct: 807 VEEMCKRSL---ESVYSLYPTLSRLQAIGELESIGEL 840
>gi|71902540 ataxia telangiectasia mutated isoform 1 [Homo sapiens]
Length = 3056
Score = 32.0 bits (71), Expect = 3.9
Identities = 35/157 (22%), Positives = 60/157 (38%), Gaps = 18/157 (11%)
Query: 644 YDLWTILPPKLAQEILVEVLEK-SLSLLASRYARAHPSRKRTPQLRLDVTTILICTENML 702
YDL T +P Q +++ L+ L + S Y + + L+ NM
Sbjct: 2049 YDLETAIPSSTRQAGIIQALQNLGLCHILSVYLKGLDYENKDWCPELEELHYQAAWRNMQ 2108
Query: 703 WSVCTSVQKLLNPHQHTDDKIFKIHTHCNNLFTTLVILTSPLTELYKTFQHGLDESASDS 762
W CTSV K + + + +L+ L L + TF L +
Sbjct: 2109 WDHCTSVSKEVEGTSYHE-----------SLYNALQSLRD---REFSTFYESLKYARVKE 2154
Query: 763 LKSFFKQPLYWVSCISHFYPSLLRTPSAGGLKAEGQL 799
++ K+ L + YP+L R + G L++ G+L
Sbjct: 2155 VEEMCKRSL---ESVYSLYPTLSRLQAIGELESIGEL 2188
>gi|169218268 PREDICTED: similar to Serine-protein kinase ATM, partial
[Homo sapiens]
Length = 2934
Score = 32.0 bits (71), Expect = 3.9
Identities = 35/157 (22%), Positives = 60/157 (38%), Gaps = 18/157 (11%)
Query: 644 YDLWTILPPKLAQEILVEVLEK-SLSLLASRYARAHPSRKRTPQLRLDVTTILICTENML 702
YDL T +P Q +++ L+ L + S Y + + L+ NM
Sbjct: 1927 YDLETAIPSSTRQAGIIQALQNLGLCHILSVYLKGLDYENKDWCPELEELHYQAAWRNMQ 1986
Query: 703 WSVCTSVQKLLNPHQHTDDKIFKIHTHCNNLFTTLVILTSPLTELYKTFQHGLDESASDS 762
W CTSV K + + + +L+ L L + TF L +
Sbjct: 1987 WDHCTSVSKEVEGTSYHE-----------SLYNALQSLRD---REFSTFYESLKYARVKE 2032
Query: 763 LKSFFKQPLYWVSCISHFYPSLLRTPSAGGLKAEGQL 799
++ K+ L + YP+L R + G L++ G+L
Sbjct: 2033 VEEMCKRSL---ESVYSLYPTLSRLQAIGELESIGEL 2066
>gi|5803145 ralA binding protein 1 [Homo sapiens]
Length = 655
Score = 32.0 bits (71), Expect = 3.9
Identities = 36/182 (19%), Positives = 76/182 (41%), Gaps = 32/182 (17%)
Query: 800 KLLLSQPRCNWNLLLETLLHHDGLLLRILLKSSKQVSDTENNLNQGPSLMEAIFKILYHC 859
+LL P CN+ L+ ++H D ++ + L++ + + L+ + + + +
Sbjct: 305 RLLKELPECNYLLISWLIVHMDHVIAK-ELETKMNIQNISIVLSPTVQISNRVLYVFF-- 361
Query: 860 SFSPQTFANVFVSYMEEEQLWDFLYNIP--------VSTCVEYELEVIRCLRLALTDAIK 911
+ + F NV + + + W + +P + + + ++ CL L IK
Sbjct: 362 THVQELFGNVVLKQVMKPLRWSNMATMPTLPETQAGIKEEIRRQEFLLNCLHRDLQGGIK 421
Query: 912 D--------TVQQIVSVM------SSRRNCETNLNKHIVPDCLLESMPKEWNYSPKETNR 957
D VQ+I++ + + R+ CET + + I S+ KE + S +E N
Sbjct: 422 DLSKEERLWEVQRILTALKRKLREAKRQECETKIAQEIA------SLSKE-DVSKEEMNE 474
Query: 958 KE 959
E
Sbjct: 475 NE 476
>gi|24415404 MDN1, midasin homolog [Homo sapiens]
Length = 5596
Score = 32.0 bits (71), Expect = 3.9
Identities = 36/129 (27%), Positives = 49/129 (37%), Gaps = 26/129 (20%)
Query: 843 NQGPSLMEAIFKI----LYHCSFSPQTFANVF-------VSYMEEEQLWDFLYNI----- 886
NQ P + E I + LYH +PQ +++ VS E LW L+N
Sbjct: 2961 NQQPQINEEISHLISFCLYHTPVTPQELRDLWSLLHHQKVSPEEITSLWSELFNSMFMSF 3020
Query: 887 ---PVSTCVEYELEVIRCLRLALTDAIKDTVQQIVSVMSSRRNCETNLNKHIVPDCLLES 943
V+T EY L + +A K SV+ S NLN+ I C E
Sbjct: 3021 WSSTVTTNPEYWLMWNPLPGMQQREAPK-------SVLDSTLKGPGNLNRPIFSKCCFEV 3073
Query: 944 MPKEWNYSP 952
+ W SP
Sbjct: 3074 LTSSWRASP 3082
>gi|169208018 PREDICTED: similar to Golgin subfamily A member 8-like
protein 2 isoform 3 [Homo sapiens]
Length = 595
Score = 31.2 bits (69), Expect = 6.6
Identities = 47/222 (21%), Positives = 94/222 (42%), Gaps = 37/222 (16%)
Query: 1056 KSIMGDQTSIHNQMIQKVIQSIEQQKPNWIERQLLKARKLSTECAFMTIEKSTALQEGDV 1115
++++ D TS+ ++ I+S++QQK +E QL + +K + E E +Q
Sbjct: 74 RAVVLDSTSVKISRLKNTIKSLKQQKKQ-VEHQLEEEKKANNERQKAERELEVQIQ---- 128
Query: 1116 ALELTEQKINTMVLDLCHKPGGREYLRQIYHIMQLNEEYLKEQLFSMNSSEEKPLPIRPL 1175
L + ++++NT DL H R + + + +++ S+ E + +
Sbjct: 129 TLIIQKEELNT---DLYHME------RSLRYFEEESKDLAVRLQHSLQCKGELERALSAV 179
Query: 1176 KTTLRSIEDQPSAFNPFHVYKAFSENMLDQVSITKWNWNWAKLLPNYLRLDKMTFSVLLK 1235
T + +Q S+ + H +++ DQ LL L K +F L
Sbjct: 180 IATEKKKANQLSSCSKAHTEWELEQSLQDQA-----------LLKAQLTQLKESFQQL-- 226
Query: 1236 NRWEMKKDETLE--EEEKA-----ILEHLKQICTPQNSSASD 1270
++++DE E E E+A + + L++ICT + D
Sbjct: 227 ---QLERDECAEHIEGERARWHQRMSKMLQEICTLKKEKQQD 265
>gi|113425121 PREDICTED: similar to Golgin subfamily A member 8-like
protein 2 isoform 4 [Homo sapiens]
Length = 632
Score = 31.2 bits (69), Expect = 6.6
Identities = 47/222 (21%), Positives = 94/222 (42%), Gaps = 37/222 (16%)
Query: 1056 KSIMGDQTSIHNQMIQKVIQSIEQQKPNWIERQLLKARKLSTECAFMTIEKSTALQEGDV 1115
++++ D TS+ ++ I+S++QQK +E QL + +K + E E +Q
Sbjct: 82 RAVVLDSTSVKISRLKNTIKSLKQQKKQ-VEHQLEEEKKANNERQKAERELEVQIQ---- 136
Query: 1116 ALELTEQKINTMVLDLCHKPGGREYLRQIYHIMQLNEEYLKEQLFSMNSSEEKPLPIRPL 1175
L + ++++NT DL H R + + + +++ S+ E + +
Sbjct: 137 TLIIQKEELNT---DLYHME------RSLRYFEEESKDLAVRLQHSLQCKGELERALSAV 187
Query: 1176 KTTLRSIEDQPSAFNPFHVYKAFSENMLDQVSITKWNWNWAKLLPNYLRLDKMTFSVLLK 1235
T + +Q S+ + H +++ DQ LL L K +F L
Sbjct: 188 IATEKKKANQLSSCSKAHTEWELEQSLQDQA-----------LLKAQLTQLKESFQQL-- 234
Query: 1236 NRWEMKKDETLE--EEEKA-----ILEHLKQICTPQNSSASD 1270
++++DE E E E+A + + L++ICT + D
Sbjct: 235 ---QLERDECAEHIEGERARWHQRMSKMLQEICTLKKEKQQD 273
>gi|194018501 C-type lectin domain family 12, member B isoform 1 [Homo
sapiens]
Length = 276
Score = 31.2 bits (69), Expect = 6.6
Identities = 22/95 (23%), Positives = 50/95 (52%), Gaps = 14/95 (14%)
Query: 1043 WSKEKLGLICMCLKSIMG------------DQTSIHNQMIQKVIQSIEQQKPNWIERQLL 1090
W LGL+ +CL ++G + + ++ + ++ ++I+QQ+ N + +QL
Sbjct: 39 WRHAALGLVTLCLMLLIGLVTLGMMFLQISNDINSDSEKLSQLQKTIQQQQDN-LSQQLG 97
Query: 1091 KARKLSTECAFMTIEKSTAL-QEGDVALELTEQKI 1124
+ LS E F+ + S+ L ++ +A++L ++ I
Sbjct: 98 NSNNLSMEEEFLKSQISSVLKRQEQMAIKLCQELI 132
>gi|194018499 C-type lectin domain family 12, member B isoform 2 [Homo
sapiens]
Length = 232
Score = 31.2 bits (69), Expect = 6.6
Identities = 22/95 (23%), Positives = 50/95 (52%), Gaps = 14/95 (14%)
Query: 1043 WSKEKLGLICMCLKSIMG------------DQTSIHNQMIQKVIQSIEQQKPNWIERQLL 1090
W LGL+ +CL ++G + + ++ + ++ ++I+QQ+ N + +QL
Sbjct: 39 WRHAALGLVTLCLMLLIGLVTLGMMFLQISNDINSDSEKLSQLQKTIQQQQDN-LSQQLG 97
Query: 1091 KARKLSTECAFMTIEKSTAL-QEGDVALELTEQKI 1124
+ LS E F+ + S+ L ++ +A++L ++ I
Sbjct: 98 NSNNLSMEEEFLKSQISSVLKRQEQMAIKLCQELI 132
>gi|58331179 KIAA1688 protein [Homo sapiens]
Length = 1114
Score = 31.2 bits (69), Expect = 6.6
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 1117 LELTEQKINTMVLDLCHKPGGREYLRQIYHIMQ 1149
L LT+QK L L + P G+EY+RQ+ ++ Q
Sbjct: 371 LVLTKQKCPERFLSLEYSPAGKEYVRQLVYVEQ 403
>gi|169208042 PREDICTED: similar to Golgin subfamily A member 8-like
protein 2 isoform 2 [Homo sapiens]
Length = 595
Score = 30.8 bits (68), Expect = 8.6
Identities = 29/121 (23%), Positives = 58/121 (47%), Gaps = 17/121 (14%)
Query: 1056 KSIMGDQTSIHNQMIQKVIQSIEQQKPNWIERQLLKARKLSTECAFMTIEKSTALQEGDV 1115
++++ D TS+ ++ I+S++QQK +E QL + +K + E E +Q
Sbjct: 74 RAVVLDSTSVKISRLKNTIKSLKQQKKQ-VEHQLEEEKKANNERQKAERELEVQIQ---- 128
Query: 1116 ALELTEQKINTMVLDLCHKPGGREYLRQ--------IYHIMQLNEEYLKEQLFSMNSSEE 1167
L + ++++NT DL H Y + + H +Q E L+ L ++ ++E+
Sbjct: 129 TLIIQKEELNT---DLYHMERSLRYFEEESKDLAVRLQHSLQCKGE-LESALSAVIATEK 184
Query: 1168 K 1168
K
Sbjct: 185 K 185
>gi|113425145 PREDICTED: similar to Golgin subfamily A member 8-like
protein 2 isoform 3 [Homo sapiens]
Length = 632
Score = 30.8 bits (68), Expect = 8.6
Identities = 29/121 (23%), Positives = 58/121 (47%), Gaps = 17/121 (14%)
Query: 1056 KSIMGDQTSIHNQMIQKVIQSIEQQKPNWIERQLLKARKLSTECAFMTIEKSTALQEGDV 1115
++++ D TS+ ++ I+S++QQK +E QL + +K + E E +Q
Sbjct: 82 RAVVLDSTSVKISRLKNTIKSLKQQKKQ-VEHQLEEEKKANNERQKAERELEVQIQ---- 136
Query: 1116 ALELTEQKINTMVLDLCHKPGGREYLRQ--------IYHIMQLNEEYLKEQLFSMNSSEE 1167
L + ++++NT DL H Y + + H +Q E L+ L ++ ++E+
Sbjct: 137 TLIIQKEELNT---DLYHMERSLRYFEEESKDLAVRLQHSLQCKGE-LESALSAVIATEK 192
Query: 1168 K 1168
K
Sbjct: 193 K 193
>gi|169208038 PREDICTED: similar to Golgin subfamily A member 8-like
protein 2 isoform 2 [Homo sapiens]
Length = 595
Score = 30.8 bits (68), Expect = 8.6
Identities = 29/121 (23%), Positives = 58/121 (47%), Gaps = 17/121 (14%)
Query: 1056 KSIMGDQTSIHNQMIQKVIQSIEQQKPNWIERQLLKARKLSTECAFMTIEKSTALQEGDV 1115
++++ D TS+ ++ I+S++QQK +E QL + +K + E E +Q
Sbjct: 74 RAVVLDSTSVKISRLKNTIKSLKQQKKQ-VEHQLEEEKKANNERQKAERELEVQIQ---- 128
Query: 1116 ALELTEQKINTMVLDLCHKPGGREYLRQ--------IYHIMQLNEEYLKEQLFSMNSSEE 1167
L + ++++NT DL H Y + + H +Q E L+ L ++ ++E+
Sbjct: 129 TLIIQKEELNT---DLYHMERSLRYFEEESKDLAVRLQHSLQCKGE-LESALSAVIATEK 184
Query: 1168 K 1168
K
Sbjct: 185 K 185
>gi|113425137 PREDICTED: similar to Golgin subfamily A member 8-like
protein 2 isoform 3 [Homo sapiens]
Length = 632
Score = 30.8 bits (68), Expect = 8.6
Identities = 29/121 (23%), Positives = 58/121 (47%), Gaps = 17/121 (14%)
Query: 1056 KSIMGDQTSIHNQMIQKVIQSIEQQKPNWIERQLLKARKLSTECAFMTIEKSTALQEGDV 1115
++++ D TS+ ++ I+S++QQK +E QL + +K + E E +Q
Sbjct: 82 RAVVLDSTSVKISRLKNTIKSLKQQKKQ-VEHQLEEEKKANNERQKAERELEVQIQ---- 136
Query: 1116 ALELTEQKINTMVLDLCHKPGGREYLRQ--------IYHIMQLNEEYLKEQLFSMNSSEE 1167
L + ++++NT DL H Y + + H +Q E L+ L ++ ++E+
Sbjct: 137 TLIIQKEELNT---DLYHMERSLRYFEEESKDLAVRLQHSLQCKGE-LESALSAVIATEK 192
Query: 1168 K 1168
K
Sbjct: 193 K 193
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.133 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,509,660
Number of Sequences: 37866
Number of extensions: 1983869
Number of successful extensions: 5770
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 5714
Number of HSP's gapped (non-prelim): 91
length of query: 1275
length of database: 18,247,518
effective HSP length: 114
effective length of query: 1161
effective length of database: 13,930,794
effective search space: 16173651834
effective search space used: 16173651834
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 68 (30.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.