Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 224586784
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|224586784 hypothetical protein LOC731220 [Homo sapiens]
(473 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|224586784 hypothetical protein LOC731220 [Homo sapiens] 939 0.0
gi|27734871 regulatory factor X, 6 [Homo sapiens] 104 2e-22
gi|19743879 regulatory factor X2 isoform b [Homo sapiens] 90 4e-18
gi|19743881 regulatory factor X2 isoform a [Homo sapiens] 90 4e-18
gi|19743886 regulatory factor X4 isoform a [Homo sapiens] 85 1e-16
gi|15011898 regulatory factor X4 isoform b [Homo sapiens] 85 1e-16
gi|47132527 regulatory factor X4 isoform c [Homo sapiens] 85 1e-16
gi|4506495 regulatory factor X3 isoform a [Homo sapiens] 85 1e-16
gi|19743884 regulatory factor X3 isoform b [Homo sapiens] 84 2e-16
gi|238859557 regulatory factor X1 [Homo sapiens] 84 3e-16
gi|7661960 Rough Deal homolog, centromere/kinetochore protein [H... 34 0.25
gi|223633986 trace amine associated receptor 5 [Homo sapiens] 33 0.43
gi|226442963 jumonji, AT rich interactive domain 1C isoform 2 [H... 33 0.56
gi|109255243 jumonji, AT rich interactive domain 1C isoform 1 [H... 33 0.56
gi|22749047 coiled-coil domain containing 24 [Homo sapiens] 32 1.6
gi|117168283 N-acetyltransferase 8B [Homo sapiens] 30 3.6
gi|64762489 solute carrier family 30 member 8 [Homo sapiens] 30 4.8
gi|111955162 5-azacytidine induced 1 isoform b [Homo sapiens] 30 4.8
gi|111955084 5-azacytidine induced 1 isoform a [Homo sapiens] 30 4.8
gi|239754648 PREDICTED: hypothetical protein [Homo sapiens] 30 6.2
gi|239749207 PREDICTED: hypothetical protein [Homo sapiens] 30 6.2
gi|239508971 PREDICTED: hypothetical protein [Homo sapiens] 30 6.2
gi|75677335 digestive-organ expansion factor homolog [Homo sapiens] 29 8.1
>gi|224586784 hypothetical protein LOC731220 [Homo sapiens]
Length = 473
Score = 939 bits (2428), Expect = 0.0
Identities = 473/473 (100%), Positives = 473/473 (100%)
Query: 1 MYEIYVETCGQNTENQVNPATFGKCEDHSPMKTDPVGSPLSEFRRCPFLEQELAKKYSCN 60
MYEIYVETCGQNTENQVNPATFGKCEDHSPMKTDPVGSPLSEFRRCPFLEQELAKKYSCN
Sbjct: 1 MYEIYVETCGQNTENQVNPATFGKCEDHSPMKTDPVGSPLSEFRRCPFLEQELAKKYSCN 60
Query: 61 MMAFLADEYCNYCRDILRNVEDLLTSFWKSLQQDTVMLMSLPDVCQLFKCYDVQLYKGIE 120
MMAFLADEYCNYCRDILRNVEDLLTSFWKSLQQDTVMLMSLPDVCQLFKCYDVQLYKGIE
Sbjct: 61 MMAFLADEYCNYCRDILRNVEDLLTSFWKSLQQDTVMLMSLPDVCQLFKCYDVQLYKGIE 120
Query: 121 DVLLHDFLEDVSIQYLKSVQLFSKKFKLWLLNALEGVPALLQISKLKEVTLFVKRLRRKT 180
DVLLHDFLEDVSIQYLKSVQLFSKKFKLWLLNALEGVPALLQISKLKEVTLFVKRLRRKT
Sbjct: 121 DVLLHDFLEDVSIQYLKSVQLFSKKFKLWLLNALEGVPALLQISKLKEVTLFVKRLRRKT 180
Query: 181 YLSNMAKTMRMVLKSKRRVSVLKSDLQAIINQGTLATSKKALASDRSGADELENNPEMKC 240
YLSNMAKTMRMVLKSKRRVSVLKSDLQAIINQGTLATSKKALASDRSGADELENNPEMKC
Sbjct: 181 YLSNMAKTMRMVLKSKRRVSVLKSDLQAIINQGTLATSKKALASDRSGADELENNPEMKC 240
Query: 241 LRNLISLLGTSTDLRVFLSCLSSHLQAFVFQTSRSKEEFTKLAASFQLRWNLLLTAVSKA 300
LRNLISLLGTSTDLRVFLSCLSSHLQAFVFQTSRSKEEFTKLAASFQLRWNLLLTAVSKA
Sbjct: 241 LRNLISLLGTSTDLRVFLSCLSSHLQAFVFQTSRSKEEFTKLAASFQLRWNLLLTAVSKA 300
Query: 301 MTLCHRDSFGSWHLFHLLLLEYMIHILQSCLEEEEEEEDMGTVKEMLPDDPTLGQPDQAL 360
MTLCHRDSFGSWHLFHLLLLEYMIHILQSCLEEEEEEEDMGTVKEMLPDDPTLGQPDQAL
Sbjct: 301 MTLCHRDSFGSWHLFHLLLLEYMIHILQSCLEEEEEEEDMGTVKEMLPDDPTLGQPDQAL 360
Query: 361 FHSLNSSLSQACASPSMEPLGVMPTHMGQGRYPVGVSNMVLRILGFLVDTAMGNKLIQVL 420
FHSLNSSLSQACASPSMEPLGVMPTHMGQGRYPVGVSNMVLRILGFLVDTAMGNKLIQVL
Sbjct: 361 FHSLNSSLSQACASPSMEPLGVMPTHMGQGRYPVGVSNMVLRILGFLVDTAMGNKLIQVL 420
Query: 421 LEDETTESAVKLSLPMGQEALITLKDGQQFVIQISDVPQSSEDIYFRENNANV 473
LEDETTESAVKLSLPMGQEALITLKDGQQFVIQISDVPQSSEDIYFRENNANV
Sbjct: 421 LEDETTESAVKLSLPMGQEALITLKDGQQFVIQISDVPQSSEDIYFRENNANV 473
>gi|27734871 regulatory factor X, 6 [Homo sapiens]
Length = 928
Score = 104 bits (259), Expect = 2e-22
Identities = 72/281 (25%), Positives = 141/281 (50%), Gaps = 12/281 (4%)
Query: 69 YCNYCRDILRN--------VEDLLTSFWKSLQQDTVMLMSLPDVCQLFKCYDVQLYKGIE 120
Y +C+ IL N ++ L FW+ + + L+ P + +F D LYK +
Sbjct: 268 YKTHCQCILDNAINGNFEEIQHFLLHFWQGMPDHLLPLLENPVIIDIFCVCDSILYKVLT 327
Query: 121 DVLLHDFLEDVSIQYLKSVQLFSKKFKLWLLNALEGVPALLQISKLKEVTLFVKRLRRKT 180
DVL+ ++++ L ++ F+K ++ W++++LE +P L K+ V FV L+R+T
Sbjct: 328 DVLIPATMQEMPESLLADIRNFAKNWEQWVVSSLENLPEALTDKKIPIVRRFVSSLKRQT 387
Query: 181 YLSNMAKTMRMVLKSKRRVSVLKSDLQAI-INQ-GTLATSKKALASDRSGADELENNPEM 238
++A+ R L + V+ + SD++ + +N G+ A + ++D E++ +
Sbjct: 388 SFLHLAQIARPALFDQHVVNSMVSDIERVDLNSIGSQALLTISGSTDTESGIYTEHD-SI 446
Query: 239 KCLRNLISLLGTSTDLRVFLSCLSSHLQAFVFQTSRSK-EEFTKLAASFQLRWNLLLTAV 297
+ L LL + + F+ L + ++ V +TS+ K A F L+W+ V
Sbjct: 447 TVFQELKDLLKKNATVEAFIEWLDTVVEQRVIKTSKQNGRSLKKRAQDFLLKWSFFGARV 506
Query: 298 SKAMTLCHRDSFGSWHLFHLLLLEYMIHILQSCLEEEEEEE 338
+TL + SFGS+HL +LL EY++ +++ ++E+E
Sbjct: 507 MHNLTLNNASSFGSFHLIRMLLDEYILLAMETQFNNDKEQE 547
>gi|19743879 regulatory factor X2 isoform b [Homo sapiens]
Length = 698
Score = 90.1 bits (222), Expect = 4e-18
Identities = 79/326 (24%), Positives = 141/326 (43%), Gaps = 37/326 (11%)
Query: 48 FLEQELAKKYSCNMMAFLADEYCNYCRDILRN-----VEDLLTSFWKSLQQDTVMLMSLP 102
FL Q+ + + + +C D++ N +E L SFW S + SLP
Sbjct: 330 FLLQDGVTLHDVKALQLVYRRHCEATVDVVMNLQFHYIEKLWLSFWNSKASSSDGPTSLP 389
Query: 103 -----------------DVCQL------FKCYDVQLYKGIEDVLLHDFLEDVSIQYLKSV 139
+CQ + D LY+ + ++L+ D L V +++
Sbjct: 390 ASDEDPEGAVLPKDKLISLCQCDPILRWMRSCDHILYQALVEILIPDVLRPVPSTLTQAI 449
Query: 140 QLFSKKFKLWLLNALEGVPALLQISKLKEVTLFVKRLRRKTYLSNMAKTMRMVLKSKRRV 199
+ F+K + WL NA+ P + +K+ V+ F + LRR T L+++A+ R VL++ ++
Sbjct: 450 RNFAKSLEGWLTNAMSDFPQQVIQTKVGVVSAFAQTLRRYTSLNHLAQAARAVLQNTSQI 509
Query: 200 SVLKSDLQAIINQGTLATSKKALASDRSGADELENNPEMKCLRNLISLLGTSTDLRVFLS 259
+ + SDL + + + S LE + ++ L + L + S
Sbjct: 510 NQMLSDLNRVDFANVQEQASWVCQCEESVVQRLEQDFKL--------TLQQQSSLDQWAS 561
Query: 260 CLSSHLQAFVFQTSRSKEEFTKLAASFQLRWNLLLTAVSKAMTLCHRDSFGSWHLFHLLL 319
L S + + Q + S F K A F L+W+ + V + +TL SFGS+HL LL
Sbjct: 562 WLDSVVTQVLKQHAGS-PSFPKAARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLY 620
Query: 320 LEYMIHILQSCLEEEEEEEDMGTVKE 345
EYM ++++ + E E + + E
Sbjct: 621 DEYMFYLVEHRVAEATGETPIAVMGE 646
>gi|19743881 regulatory factor X2 isoform a [Homo sapiens]
Length = 723
Score = 90.1 bits (222), Expect = 4e-18
Identities = 79/326 (24%), Positives = 141/326 (43%), Gaps = 37/326 (11%)
Query: 48 FLEQELAKKYSCNMMAFLADEYCNYCRDILRN-----VEDLLTSFWKSLQQDTVMLMSLP 102
FL Q+ + + + +C D++ N +E L SFW S + SLP
Sbjct: 355 FLLQDGVTLHDVKALQLVYRRHCEATVDVVMNLQFHYIEKLWLSFWNSKASSSDGPTSLP 414
Query: 103 -----------------DVCQL------FKCYDVQLYKGIEDVLLHDFLEDVSIQYLKSV 139
+CQ + D LY+ + ++L+ D L V +++
Sbjct: 415 ASDEDPEGAVLPKDKLISLCQCDPILRWMRSCDHILYQALVEILIPDVLRPVPSTLTQAI 474
Query: 140 QLFSKKFKLWLLNALEGVPALLQISKLKEVTLFVKRLRRKTYLSNMAKTMRMVLKSKRRV 199
+ F+K + WL NA+ P + +K+ V+ F + LRR T L+++A+ R VL++ ++
Sbjct: 475 RNFAKSLEGWLTNAMSDFPQQVIQTKVGVVSAFAQTLRRYTSLNHLAQAARAVLQNTSQI 534
Query: 200 SVLKSDLQAIINQGTLATSKKALASDRSGADELENNPEMKCLRNLISLLGTSTDLRVFLS 259
+ + SDL + + + S LE + ++ L + L + S
Sbjct: 535 NQMLSDLNRVDFANVQEQASWVCQCEESVVQRLEQDFKL--------TLQQQSSLDQWAS 586
Query: 260 CLSSHLQAFVFQTSRSKEEFTKLAASFQLRWNLLLTAVSKAMTLCHRDSFGSWHLFHLLL 319
L S + + Q + S F K A F L+W+ + V + +TL SFGS+HL LL
Sbjct: 587 WLDSVVTQVLKQHAGS-PSFPKAARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLY 645
Query: 320 LEYMIHILQSCLEEEEEEEDMGTVKE 345
EYM ++++ + E E + + E
Sbjct: 646 DEYMFYLVEHRVAEATGETPIAVMGE 671
>gi|19743886 regulatory factor X4 isoform a [Homo sapiens]
Length = 641
Score = 85.1 bits (209), Expect = 1e-16
Identities = 70/285 (24%), Positives = 128/285 (44%), Gaps = 13/285 (4%)
Query: 69 YCNYCRDILRNV--------EDLLTSFWKSLQQDTVMLMSLPDVCQLFKCYDVQLYKGIE 120
Y +C+ IL V + L FW+ + + ++ V + D LYK I
Sbjct: 111 YRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHMLPVLGSSTVVNIVGVCDSILYKAIS 170
Query: 121 DVLLHDFLEDVSIQYLKSVQLFSKKFKLWLLNALEGVPALLQISKLKEVTLFVKRLRRKT 180
VL+ L+ + + ++ F+K+ WL AL +P L+ K + F + LRR+T
Sbjct: 171 GVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLPENLRNIKFELSRRFSQILRRQT 230
Query: 181 YLSNMAKTMRMVLKSKRRVSVLKSDLQAIINQGTLATSKKALASDRSGADELENNPEMKC 240
L+++ + R V+ S + D + N + +K+ L + DE +
Sbjct: 231 SLNHLCQASRTVIHSADITFQMLEDWR---NVDLNSITKQTLYTMEDSRDE-HRKLITQL 286
Query: 241 LRNLISLLGTSTDLRVFLSCLSSHLQAFVFQTSRSKE-EFTKLAASFQLRWNLLLTAVSK 299
+ LL + + ++ L + + V + + ++ K+A F L W+ T V +
Sbjct: 287 YQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGSLKKVAQQFLLMWSCFGTRVIR 346
Query: 300 AMTLCHRDSFGSWHLFHLLLLEYMIHILQSCLEEEEEEEDMGTVK 344
MTL SFGS+HL HL+ +Y++++L+S +E E M +K
Sbjct: 347 DMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANELMRAMK 391
>gi|15011898 regulatory factor X4 isoform b [Homo sapiens]
Length = 563
Score = 85.1 bits (209), Expect = 1e-16
Identities = 70/285 (24%), Positives = 128/285 (44%), Gaps = 13/285 (4%)
Query: 69 YCNYCRDILRNV--------EDLLTSFWKSLQQDTVMLMSLPDVCQLFKCYDVQLYKGIE 120
Y +C+ IL V + L FW+ + + ++ V + D LYK I
Sbjct: 214 YRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHMLPVLGSSTVVNIVGVCDSILYKAIS 273
Query: 121 DVLLHDFLEDVSIQYLKSVQLFSKKFKLWLLNALEGVPALLQISKLKEVTLFVKRLRRKT 180
VL+ L+ + + ++ F+K+ WL AL +P L+ K + F + LRR+T
Sbjct: 274 GVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLPENLRNIKFELSRRFSQILRRQT 333
Query: 181 YLSNMAKTMRMVLKSKRRVSVLKSDLQAIINQGTLATSKKALASDRSGADELENNPEMKC 240
L+++ + R V+ S + D + N + +K+ L + DE +
Sbjct: 334 SLNHLCQASRTVIHSADITFQMLEDWR---NVDLNSITKQTLYTMEDSRDE-HRKLITQL 389
Query: 241 LRNLISLLGTSTDLRVFLSCLSSHLQAFVFQTSRSKE-EFTKLAASFQLRWNLLLTAVSK 299
+ LL + + ++ L + + V + + ++ K+A F L W+ T V +
Sbjct: 390 YQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGSLKKVAQQFLLMWSCFGTRVIR 449
Query: 300 AMTLCHRDSFGSWHLFHLLLLEYMIHILQSCLEEEEEEEDMGTVK 344
MTL SFGS+HL HL+ +Y++++L+S +E E M +K
Sbjct: 450 DMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANELMRAMK 494
>gi|47132527 regulatory factor X4 isoform c [Homo sapiens]
Length = 735
Score = 85.1 bits (209), Expect = 1e-16
Identities = 70/285 (24%), Positives = 128/285 (44%), Gaps = 13/285 (4%)
Query: 69 YCNYCRDILRNV--------EDLLTSFWKSLQQDTVMLMSLPDVCQLFKCYDVQLYKGIE 120
Y +C+ IL V + L FW+ + + ++ V + D LYK I
Sbjct: 205 YRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHMLPVLGSSTVVNIVGVCDSILYKAIS 264
Query: 121 DVLLHDFLEDVSIQYLKSVQLFSKKFKLWLLNALEGVPALLQISKLKEVTLFVKRLRRKT 180
VL+ L+ + + ++ F+K+ WL AL +P L+ K + F + LRR+T
Sbjct: 265 GVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLPENLRNIKFELSRRFSQILRRQT 324
Query: 181 YLSNMAKTMRMVLKSKRRVSVLKSDLQAIINQGTLATSKKALASDRSGADELENNPEMKC 240
L+++ + R V+ S + D + N + +K+ L + DE +
Sbjct: 325 SLNHLCQASRTVIHSADITFQMLEDWR---NVDLNSITKQTLYTMEDSRDE-HRKLITQL 380
Query: 241 LRNLISLLGTSTDLRVFLSCLSSHLQAFVFQTSRSKE-EFTKLAASFQLRWNLLLTAVSK 299
+ LL + + ++ L + + V + + ++ K+A F L W+ T V +
Sbjct: 381 YQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGSLKKVAQQFLLMWSCFGTRVIR 440
Query: 300 AMTLCHRDSFGSWHLFHLLLLEYMIHILQSCLEEEEEEEDMGTVK 344
MTL SFGS+HL HL+ +Y++++L+S +E E M +K
Sbjct: 441 DMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANELMRAMK 485
>gi|4506495 regulatory factor X3 isoform a [Homo sapiens]
Length = 707
Score = 85.1 bits (209), Expect = 1e-16
Identities = 59/237 (24%), Positives = 114/237 (48%), Gaps = 12/237 (5%)
Query: 112 DVQLYKGIEDVLLHDFLEDVSIQYLKSVQLFSKKFKLWLLNALEGVPALLQISKLKEVTL 171
D +Y+ + ++L+ D L + ++++ F+K + WL NA+ +P + +K+ V+
Sbjct: 432 DHGMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWLSNAMNNIPQRMIQTKVAAVSA 491
Query: 172 FVKRLRRKTYLSNMAKTMRMVLKSKRRVSVLKSDLQAIINQGTLATSKKALASDRSGADE 231
F + LRR T L+++A+ R VL++ +++ + SDL + + D +
Sbjct: 492 FAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASWVCQCDDNMVQR 551
Query: 232 LENNPEMKCLRNLISLLGTSTDLRVFLSCLSSHLQAFVFQTSRSKEEFTKLAASFQLRWN 291
LE + +M L + L + + L + + + + F K A F L+W+
Sbjct: 552 LETDFKM--------TLQQQSTLEQWAAWLDNVMMQ-ALKPYEGRPSFPKAARQFLLKWS 602
Query: 292 LLLTAVSKAMTLCHRDSFGSWHLFHLLLLEYMIHILQSCLEEEEEEED---MGTVKE 345
+ V + +TL SFGS+HL LL EYM ++++ + + E MG V+E
Sbjct: 603 FYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEHRVAQATGETPIAVMGEVRE 659
>gi|19743884 regulatory factor X3 isoform b [Homo sapiens]
Length = 749
Score = 84.3 bits (207), Expect = 2e-16
Identities = 56/234 (23%), Positives = 112/234 (47%), Gaps = 9/234 (3%)
Query: 112 DVQLYKGIEDVLLHDFLEDVSIQYLKSVQLFSKKFKLWLLNALEGVPALLQISKLKEVTL 171
D +Y+ + ++L+ D L + ++++ F+K + WL NA+ +P + +K+ V+
Sbjct: 432 DHGMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWLSNAMNNIPQRMIQTKVAAVSA 491
Query: 172 FVKRLRRKTYLSNMAKTMRMVLKSKRRVSVLKSDLQAIINQGTLATSKKALASDRSGADE 231
F + LRR T L+++A+ R VL++ +++ + SDL + + D +
Sbjct: 492 FAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASWVCQCDDNMVQR 551
Query: 232 LENNPEMKCLRNLISLLGTSTDLRVFLSCLSSHLQAFVFQTSRSKEEFTKLAASFQLRWN 291
LE + +M L + L + + L + + + + F K A F L+W+
Sbjct: 552 LETDFKM--------TLQQQSTLEQWAAWLDNVMMQ-ALKPYEGRPSFPKAARQFLLKWS 602
Query: 292 LLLTAVSKAMTLCHRDSFGSWHLFHLLLLEYMIHILQSCLEEEEEEEDMGTVKE 345
+ V + +TL SFGS+HL LL EYM ++++ + + E + + E
Sbjct: 603 FYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEHRVAQATGETPIAVMGE 656
>gi|238859557 regulatory factor X1 [Homo sapiens]
Length = 979
Score = 84.0 bits (206), Expect = 3e-16
Identities = 81/355 (22%), Positives = 152/355 (42%), Gaps = 47/355 (13%)
Query: 68 EYCNYCRDILRN-----VEDLLTSFWK-SLQQDT--------------------VMLMSL 101
E+C D++ N VE L +FW+ +L Q + V+L
Sbjct: 614 EHCEAIVDVMVNLQFTLVETLWKTFWRYNLSQPSEAPPLAVHDEAEKRLPKAILVLLSKF 673
Query: 102 PDVCQLFKCYDVQLYKGIEDVLLHDFLEDVSIQYLKSVQLFSKKFKLWLLNALEGVPALL 161
V Q K D LY+G+ ++L+ D L + ++++ F+K + WL +A+ +P +
Sbjct: 674 EPVLQWTKHCDNVLYQGLVEILIPDVLRPIPSALTQAIRNFAKSLESWLTHAMVNIPEEM 733
Query: 162 QISKLKEVTLFVKRLRRKTYLSNMAKTMRMVLKSKRRVSVLKSDLQAIINQGTLATSKKA 221
K+ F + LRR T L+++A+ R VL++ +++ + SDL + +
Sbjct: 734 LRVKVAAAGAFAQTLRRYTSLNHLAQAARAVLQNTAQINQMLSDLNRVDFANVQEQASWV 793
Query: 222 LASDRSGADELENNPEMKCLRNLISLLGTSTDLRVFLSCLSSHLQAFVFQTSRSKEEFTK 281
+ LE + ++ L L + + L + V + + F K
Sbjct: 794 CRCEDRVVQRLEQDFKVT--------LQQQNSLEQWAAWLDGVVSQ-VLKPYQGSAGFPK 844
Query: 282 LAASFQLRWNLLLTAVSKAMTLCHRDSFGSWHLFHLLLLEYMIHILQSCLEEEEEEEDMG 341
A F L+W+ + V + +TL SFGS+HL LL EYM ++++ + + + E +
Sbjct: 845 AAKLFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMYYLIEHRVAQAKGETPIA 904
Query: 342 TVKE-------MLPDDPTLGQPDQALFHSLNS-----SLSQACASPSMEPLGVMP 384
+ E + P DP + ++ S + SL+ SP++ P + P
Sbjct: 905 VMGEFANLATSLNPLDPDKDEEEEEEEESEDELPQDISLAAGGESPALGPETLEP 959
>gi|7661960 Rough Deal homolog, centromere/kinetochore protein [Homo
sapiens]
Length = 2209
Score = 34.3 bits (77), Expect = 0.25
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Query: 81 EDLLTSFWKSLQQDTVMLMSLPDVCQLFKCYDVQLYKGIEDVLLHDFLEDVSIQYLKSV- 139
E ++ WK+ +++ + + ++C +K YD+QL+ G LL L I YL+ V
Sbjct: 1944 EGMIKGLWKNHSHESMAVRLVTELCLEYKIYDLQLWNG----LLQKLLGFNMIPYLRKVL 1999
Query: 140 QLFSKKFKLW 149
+ S LW
Sbjct: 2000 KAISSIHSLW 2009
>gi|223633986 trace amine associated receptor 5 [Homo sapiens]
Length = 337
Score = 33.5 bits (75), Expect = 0.43
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Query: 115 LYKGIEDVLLHDFLEDVSIQYLKSVQLFSKKFKLWLLNALEGVPALLQISKLKEVTLFVK 174
LY + + L +LE++ + S QL KF WL L VP L+ IS V +FV
Sbjct: 170 LYTDVVETRLSQWLEEMPC--VGSCQLLLNKFWGWLNFPLFFVPCLIMISLY--VKIFVV 225
Query: 175 RLRRKTYLSNMAKTMRMVLKSKRRVS 200
R+ ++ ++K++ K +R+ +
Sbjct: 226 ATRQAQQITTLSKSLAGAAKHERKAA 251
>gi|226442963 jumonji, AT rich interactive domain 1C isoform 2 [Homo
sapiens]
Length = 1379
Score = 33.1 bits (74), Expect = 0.56
Identities = 33/129 (25%), Positives = 55/129 (42%), Gaps = 19/129 (14%)
Query: 164 SKLKEVTLFVKRLRRKTYLSNMAK------TMRMVLKSKRRVSVLKSDLQAIINQGTLAT 217
++L+E+ +R K +L A+ T+ +++ + V ++QA+
Sbjct: 904 AELQELLTIAERWEEKAHLCLEARQKHPPATLEAIIREAENIPVHLPNIQAL-------- 955
Query: 218 SKKALASDRS---GADELENNPEMKCLRNLISLLGTSTDLRVFLSCLSS-HLQAFVFQTS 273
K+ALA R+ DE++N CL +L L+ DL V L L LQ +
Sbjct: 956 -KEALAKARAWIADVDEIQNGDHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTAHSW 1014
Query: 274 RSKEEFTKL 282
R K T L
Sbjct: 1015 REKASKTFL 1023
>gi|109255243 jumonji, AT rich interactive domain 1C isoform 1 [Homo
sapiens]
Length = 1560
Score = 33.1 bits (74), Expect = 0.56
Identities = 33/129 (25%), Positives = 55/129 (42%), Gaps = 19/129 (14%)
Query: 164 SKLKEVTLFVKRLRRKTYLSNMAK------TMRMVLKSKRRVSVLKSDLQAIINQGTLAT 217
++L+E+ +R K +L A+ T+ +++ + V ++QA+
Sbjct: 971 AELQELLTIAERWEEKAHLCLEARQKHPPATLEAIIREAENIPVHLPNIQAL-------- 1022
Query: 218 SKKALASDRS---GADELENNPEMKCLRNLISLLGTSTDLRVFLSCLSS-HLQAFVFQTS 273
K+ALA R+ DE++N CL +L L+ DL V L L LQ +
Sbjct: 1023 -KEALAKARAWIADVDEIQNGDHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTAHSW 1081
Query: 274 RSKEEFTKL 282
R K T L
Sbjct: 1082 REKASKTFL 1090
>gi|22749047 coiled-coil domain containing 24 [Homo sapiens]
Length = 307
Score = 31.6 bits (70), Expect = 1.6
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 320 LEYMIHILQSCLEEEEEEEDMGTVKEMLPDDPTLGQPDQALFHSLNSSLSQACASPS--M 377
LE I ILQ CLEEE + + P L + +A+ L +S+ +C SP+
Sbjct: 176 LEREILILQRCLEEEYLRPCHPSEAALEPTLAELKEQKKAMEQELQASVGPSCVSPNHRQ 235
Query: 378 EPLG 381
PLG
Sbjct: 236 RPLG 239
>gi|117168283 N-acetyltransferase 8B [Homo sapiens]
Length = 227
Score = 30.4 bits (67), Expect = 3.6
Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 2/74 (2%)
Query: 334 EEEEEDMGTVKEMLPDDPTLGQPDQALFHSL--NSSLSQACASPSMEPLGVMPTHMGQGR 391
E EE+ +GTV + DDPTL + LFH N Q A + + G
Sbjct: 113 ESEEKVVGTVGALPVDDPTLREKRLQLFHLSVDNEHRGQGIAKALVRTVLQFARDQGYSE 172
Query: 392 YPVGVSNMVLRILG 405
+ SN+ L +G
Sbjct: 173 VVLDTSNIQLSAMG 186
>gi|64762489 solute carrier family 30 member 8 [Homo sapiens]
Length = 369
Score = 30.0 bits (66), Expect = 4.8
Identities = 27/88 (30%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Query: 132 SIQYLKSVQLFSKKFKLWLLNALEGVPALLQISKLKEVTLFVKRLRRKTYLSNMAKTMRM 191
SI L S K F + L+ EGVP L S +KE+ L V + L + TM
Sbjct: 256 SILVLASTITILKDFSILLM---EGVPKSLNYSGVKELILAVDGVLSVHSLHIWSLTMNQ 312
Query: 192 VLKSKRRVSVLKSDLQAIINQGTLATSK 219
V+ S + D Q + + A SK
Sbjct: 313 VILSAHVATAASRDSQVVRREIAKALSK 340
>gi|111955162 5-azacytidine induced 1 isoform b [Homo sapiens]
Length = 1044
Score = 30.0 bits (66), Expect = 4.8
Identities = 22/90 (24%), Positives = 41/90 (45%), Gaps = 13/90 (14%)
Query: 161 LQISKLKEVTLFVKRLRRKTYLSNMAKTM-------------RMVLKSKRRVSVLKSDLQ 207
L+I KLKE+ ++ RR+ ++S K + +++ + K+ V LKS +
Sbjct: 672 LEIKKLKELMSATEKARREKWISEKTKKIKEVTVRGLEPEIQKLIARHKQEVRRLKSLHE 731
Query: 208 AIINQGTLATSKKALASDRSGADELENNPE 237
A + Q S++ L ++LE E
Sbjct: 732 AELLQSDERASQRCLRQAEELREQLEREKE 761
>gi|111955084 5-azacytidine induced 1 isoform a [Homo sapiens]
Length = 1080
Score = 30.0 bits (66), Expect = 4.8
Identities = 22/90 (24%), Positives = 41/90 (45%), Gaps = 13/90 (14%)
Query: 161 LQISKLKEVTLFVKRLRRKTYLSNMAKTM-------------RMVLKSKRRVSVLKSDLQ 207
L+I KLKE+ ++ RR+ ++S K + +++ + K+ V LKS +
Sbjct: 672 LEIKKLKELMSATEKARREKWISEKTKKIKEVTVRGLEPEIQKLIARHKQEVRRLKSLHE 731
Query: 208 AIINQGTLATSKKALASDRSGADELENNPE 237
A + Q S++ L ++LE E
Sbjct: 732 AELLQSDERASQRCLRQAEELREQLEREKE 761
>gi|239754648 PREDICTED: hypothetical protein [Homo sapiens]
Length = 377
Score = 29.6 bits (65), Expect = 6.2
Identities = 16/48 (33%), Positives = 21/48 (43%)
Query: 339 DMGTVKEMLPDDPTLGQPDQALFHSLNSSLSQACASPSMEPLGVMPTH 386
D GT+ P G D + H + L QAC M+P+ VM H
Sbjct: 149 DPGTLGSQSPSQLGHGAHDIVVAHHIAQGLPQACRVLGMQPVCVMQDH 196
>gi|239749207 PREDICTED: hypothetical protein [Homo sapiens]
Length = 369
Score = 29.6 bits (65), Expect = 6.2
Identities = 16/48 (33%), Positives = 21/48 (43%)
Query: 339 DMGTVKEMLPDDPTLGQPDQALFHSLNSSLSQACASPSMEPLGVMPTH 386
D GT+ P G D + H + L QAC M+P+ VM H
Sbjct: 141 DPGTLGSQSPSQLGHGAHDIVVAHHIAQGLPQACRVLGMQPVCVMQDH 188
>gi|239508971 PREDICTED: hypothetical protein [Homo sapiens]
Length = 369
Score = 29.6 bits (65), Expect = 6.2
Identities = 16/48 (33%), Positives = 21/48 (43%)
Query: 339 DMGTVKEMLPDDPTLGQPDQALFHSLNSSLSQACASPSMEPLGVMPTH 386
D GT+ P G D + H + L QAC M+P+ VM H
Sbjct: 141 DPGTLGSQSPSQLGHGAHDIVVAHHIAQGLPQACRVLGMQPVCVMQDH 188
>gi|75677335 digestive-organ expansion factor homolog [Homo sapiens]
Length = 756
Score = 29.3 bits (64), Expect = 8.1
Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 323 MIHILQSCLEEEEEEEDMGTVKEMLPDDPTLGQPDQALFHSLNSSL-SQACASPSMEPLG 381
++ L++ EEEEE+E+ ++ + DD + D S+ + +++ SP L
Sbjct: 75 LLATLKNVSEEEEEDEEEEEEEDSIVDDAEMNDEDGGSDVSVEEEMAAESTESPENVALS 134
Query: 382 VMPTHMGQGRYPVGVS 397
P G P G S
Sbjct: 135 ADPEGKEDGEEPPGTS 150
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.134 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,822,700
Number of Sequences: 37866
Number of extensions: 726558
Number of successful extensions: 2642
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 2614
Number of HSP's gapped (non-prelim): 27
length of query: 473
length of database: 18,247,518
effective HSP length: 106
effective length of query: 367
effective length of database: 14,233,722
effective search space: 5223775974
effective search space used: 5223775974
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.