Guide to the Human Genome
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Name: CCDC24 Sequence: fasta or formatted (307aa) NCBI GI: 22749047
Description:

coiled-coil domain containing 24

Referenced in:

Coiled-Coil Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.5         26           2
 C cysteine            3.3         10           2
 D aspartate           2.6          8           1
 E glutamate          10.1         31           3
 F phenylalanine       0.7          2           1
 G glycine             4.9         15           3
 H histidine           3.3         10           1
 I isoleucine          2.9          9           2
 K lysine              2.3          7           2
 L leucine            15.3         47           2
 M methionine          1.6          5           1
 N asparagine          1.0          3           1
 P proline            10.4         32           3
 Q glutamine           7.5         23           1
 R arginine            9.8         30           2
 S serine              8.5         26           2
 T threonine           1.6          5           1
 V valine              3.9         12           1
 W tryptophan          1.0          3           1
 Y tyrosine            1.0          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   coiled-coil domain containing 24 
HOOK2                 0.025   hook homolog 2 isoform 1 
VPS37C                0.022   vacuolar protein sorting 37C 
C1orf106              0.020   hypothetical protein LOC55765 isoform 2 
C1orf106              0.020   hypothetical protein LOC55765 isoform 1 
HOOK2                 0.020   hook homolog 2 isoform 2 
NINL                  0.018   ninein-like 
FOSL1                 0.017   FOS-like antigen 1 
MCM10                 0.017   minichromosome maintenance complex component 10 isof...
EEA1                  0.017   early endosome antigen 1, 162kD 
CIT                   0.017   citron 
MYH7B                 0.017   myosin, heavy polypeptide 7B, cardiac muscle, beta ...
ESR1                  0.017   estrogen receptor alpha isoform 4 
ESR1                  0.017   estrogen receptor alpha isoform 3 
ESR1                  0.017   estrogen receptor alpha isoform 2 
ESR1                  0.017   estrogen receptor alpha isoform 1 
FLJ22184              0.017   PREDICTED: hypothetical protein FLJ22184 
LOC100132483          0.017   PREDICTED: hypothetical protein 
CD3EAP                0.017   CD3E antigen, epsilon polypeptide associated protein ...
SYN1                  0.017   synapsin I isoform Ia 
SYN1                  0.017   synapsin I isoform Ib 
EGLN2                 0.015   EGL nine (C.elegans) homolog 2 
EGLN2                 0.015   EGL nine (C.elegans) homolog 2 
SEC16A                0.015   SEC16 homolog A 
MCM10                 0.015   minichromosome maintenance complex component 10 isof...
MAP7D1                0.015   MAP7 domain containing 1 
LOC100131722          0.015   PREDICTED: hypothetical protein 
LOC100133270          0.015   PREDICTED: hypothetical protein 
LOC100132410          0.015   PREDICTED: hypothetical protein 
LOC100131722          0.015   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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