Search of human proteins with 223972634

Search of human proteins with 223972634

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|223972634 tRNA-intron nuclease 2 isoform 2 [Homo sapiens]
         (439 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|223972634 tRNA-intron nuclease 2 isoform 2 [Homo sapiens]          904   0.0  
gi|223972632 tRNA-intron nuclease 2 isoform 1 [Homo sapiens]          889   0.0  
gi|13376882 tRNA-intron nuclease 2 isoform 1 [Homo sapiens]           889   0.0  
gi|223972638 tRNA-intron nuclease 2 isoform 4 [Homo sapiens]          807   0.0  
gi|223972636 tRNA-intron nuclease 2 isoform 3 [Homo sapiens]          707   0.0  
gi|116875842 tRNA-intron endonuclease 34 [Homo sapiens]                33   0.39 
gi|116875840 tRNA-intron endonuclease 34 [Homo sapiens]                33   0.39 
gi|122114658 hypothetical protein LOC23053 [Homo sapiens]              31   2.5  
gi|46049114 M-phase phosphoprotein 1 [Homo sapiens]                    31   2.5  
gi|254281232 zinc finger and SCAN domain containing 12 [Homo sap...    30   3.3  
gi|4507163 SRY (sex determining region Y)-box 4 [Homo sapiens]         30   4.3  
gi|239752435 PREDICTED: similar to melanoma antigen family C, 2 ...    30   4.3  
gi|239746952 PREDICTED: similar to melanoma antigen family C, 2 ...    30   4.3  
gi|4557317 annexin A11 [Homo sapiens]                                  30   4.3  
gi|22165433 annexin A11 [Homo sapiens]                                 30   4.3  
gi|22165431 annexin A11 [Homo sapiens]                                 30   4.3  
gi|49087132 sal-like 2 [Homo sapiens]                                  30   4.3  
gi|112421108 capicua homolog [Homo sapiens]                            30   4.3  
gi|9256600 protocadherin alpha subfamily C, 2 isoform 1 precurso...    30   4.3  
gi|239743453 PREDICTED: hypothetical protein XP_002342852 [Homo ...    30   5.7  
gi|4826692 defensin, beta 4 precursor [Homo sapiens]                   30   5.7  
gi|38505213 YTH domain containing 2 [Homo sapiens]                     30   5.7  
gi|154277120 spectrin repeat containing, nuclear envelope 1 isof...    29   7.4  
gi|23097308 spectrin repeat containing, nuclear envelope 1 isofo...    29   7.4  
gi|118498364 dapper 1 isoform 2 [Homo sapiens]                         29   7.4  
gi|24158478 dapper 1 isoform 1 [Homo sapiens]                          29   7.4  
gi|49472835 bridging integrator 2 [Homo sapiens]                       29   7.4  
gi|48762750 phosphodiesterase 9A isoform o [Homo sapiens]              29   9.7  
gi|48762748 phosphodiesterase 9A isoform n [Homo sapiens]              29   9.7  
gi|48762746 phosphodiesterase 9A isoform m [Homo sapiens]              29   9.7  

>gi|223972634 tRNA-intron nuclease 2 isoform 2 [Homo sapiens]
          Length = 439

 Score =  904 bits (2335), Expect = 0.0
 Identities = 439/439 (100%), Positives = 439/439 (100%)

Query: 1   MAEAVFHAPKRKRRVYETYESPLPIPFGQDHGPLKEFKIFRAEMINNNVIVRNAEDIEQL 60
           MAEAVFHAPKRKRRVYETYESPLPIPFGQDHGPLKEFKIFRAEMINNNVIVRNAEDIEQL
Sbjct: 1   MAEAVFHAPKRKRRVYETYESPLPIPFGQDHGPLKEFKIFRAEMINNNVIVRNAEDIEQL 60

Query: 61  YGKGYFGKGILSRSRPSFTISDPKLVAKWKDMKTNMPIITSKRYQHSVEWAAELMRRQGQ 120
           YGKGYFGKGILSRSRPSFTISDPKLVAKWKDMKTNMPIITSKRYQHSVEWAAELMRRQGQ
Sbjct: 61  YGKGYFGKGILSRSRPSFTISDPKLVAKWKDMKTNMPIITSKRYQHSVEWAAELMRRQGQ 120

Query: 121 DESTVRRILKDYTKPLEHPPVKRNEEAQVHDKLNSGMVSNMEGTAGGERPSVVNGDSGKS 180
           DESTVRRILKDYTKPLEHPPVKRNEEAQVHDKLNSGMVSNMEGTAGGERPSVVNGDSGKS
Sbjct: 121 DESTVRRILKDYTKPLEHPPVKRNEEAQVHDKLNSGMVSNMEGTAGGERPSVVNGDSGKS 180

Query: 181 GGVGDPREPLGCLQEGSGCHPTTESFEKSVREDASPLPHVCCCKQDALILQRGLHHEDGS 240
           GGVGDPREPLGCLQEGSGCHPTTESFEKSVREDASPLPHVCCCKQDALILQRGLHHEDGS
Sbjct: 181 GGVGDPREPLGCLQEGSGCHPTTESFEKSVREDASPLPHVCCCKQDALILQRGLHHEDGS 240

Query: 241 QHIGLLHPGDRGPDHEYVLVEEAECAMSEREAAPNEEAFFLVYALGCLSIYYEKEPLTIV 300
           QHIGLLHPGDRGPDHEYVLVEEAECAMSEREAAPNEEAFFLVYALGCLSIYYEKEPLTIV
Sbjct: 241 QHIGLLHPGDRGPDHEYVLVEEAECAMSEREAAPNEEAFFLVYALGCLSIYYEKEPLTIV 300

Query: 301 KLWKAFTVVQPTFRTTYMAYHYFRSKGWVPKVGLKYGTDLLLYRKGPPFYHASYSVIIEL 360
           KLWKAFTVVQPTFRTTYMAYHYFRSKGWVPKVGLKYGTDLLLYRKGPPFYHASYSVIIEL
Sbjct: 301 KLWKAFTVVQPTFRTTYMAYHYFRSKGWVPKVGLKYGTDLLLYRKGPPFYHASYSVIIEL 360

Query: 361 VDDHFEGSLRRPLSWKSLAALSRVSVNVSKELMLCYLIKPSTMTDKEMESPECMKRIKVQ 420
           VDDHFEGSLRRPLSWKSLAALSRVSVNVSKELMLCYLIKPSTMTDKEMESPECMKRIKVQ
Sbjct: 361 VDDHFEGSLRRPLSWKSLAALSRVSVNVSKELMLCYLIKPSTMTDKEMESPECMKRIKVQ 420

Query: 421 EVILSRWVSSRERSDQDDL 439
           EVILSRWVSSRERSDQDDL
Sbjct: 421 EVILSRWVSSRERSDQDDL 439


>gi|223972632 tRNA-intron nuclease 2 isoform 1 [Homo sapiens]
          Length = 465

 Score =  889 bits (2298), Expect = 0.0
 Identities = 439/465 (94%), Positives = 439/465 (94%), Gaps = 26/465 (5%)

Query: 1   MAEAVFHAPKRKRRVYETYESPLPIPFGQDHGPLKEFKIFRAEMINNNVIVRNAEDIEQL 60
           MAEAVFHAPKRKRRVYETYESPLPIPFGQDHGPLKEFKIFRAEMINNNVIVRNAEDIEQL
Sbjct: 1   MAEAVFHAPKRKRRVYETYESPLPIPFGQDHGPLKEFKIFRAEMINNNVIVRNAEDIEQL 60

Query: 61  YGKGYFGKGILSRSRPSFTISDPKLVAKWKDMKTNMPIITSKRYQHSVEWAAELMRRQGQ 120
           YGKGYFGKGILSRSRPSFTISDPKLVAKWKDMKTNMPIITSKRYQHSVEWAAELMRRQGQ
Sbjct: 61  YGKGYFGKGILSRSRPSFTISDPKLVAKWKDMKTNMPIITSKRYQHSVEWAAELMRRQGQ 120

Query: 121 DESTVRRILKDYTKPLEHPPVKRNEEAQVHDKLNSGMVSNMEGTAGGERPSVVNGDSGKS 180
           DESTVRRILKDYTKPLEHPPVKRNEEAQVHDKLNSGMVSNMEGTAGGERPSVVNGDSGKS
Sbjct: 121 DESTVRRILKDYTKPLEHPPVKRNEEAQVHDKLNSGMVSNMEGTAGGERPSVVNGDSGKS 180

Query: 181 GGVGDPREPLGCLQEGSGCHPTTESFEKSVREDASPLPHVCCCKQDALILQRGLHHEDGS 240
           GGVGDPREPLGCLQEGSGCHPTTESFEKSVREDASPLPHVCCCKQDALILQRGLHHEDGS
Sbjct: 181 GGVGDPREPLGCLQEGSGCHPTTESFEKSVREDASPLPHVCCCKQDALILQRGLHHEDGS 240

Query: 241 QHIGLLHPGDRGPDHEYVLVEEAECAMSEREAAPN------------------------- 275
           QHIGLLHPGDRGPDHEYVLVEEAECAMSEREAAPN                         
Sbjct: 241 QHIGLLHPGDRGPDHEYVLVEEAECAMSEREAAPNEELVQRNRLICRRNPYRIFEYLQLS 300

Query: 276 -EEAFFLVYALGCLSIYYEKEPLTIVKLWKAFTVVQPTFRTTYMAYHYFRSKGWVPKVGL 334
            EEAFFLVYALGCLSIYYEKEPLTIVKLWKAFTVVQPTFRTTYMAYHYFRSKGWVPKVGL
Sbjct: 301 LEEAFFLVYALGCLSIYYEKEPLTIVKLWKAFTVVQPTFRTTYMAYHYFRSKGWVPKVGL 360

Query: 335 KYGTDLLLYRKGPPFYHASYSVIIELVDDHFEGSLRRPLSWKSLAALSRVSVNVSKELML 394
           KYGTDLLLYRKGPPFYHASYSVIIELVDDHFEGSLRRPLSWKSLAALSRVSVNVSKELML
Sbjct: 361 KYGTDLLLYRKGPPFYHASYSVIIELVDDHFEGSLRRPLSWKSLAALSRVSVNVSKELML 420

Query: 395 CYLIKPSTMTDKEMESPECMKRIKVQEVILSRWVSSRERSDQDDL 439
           CYLIKPSTMTDKEMESPECMKRIKVQEVILSRWVSSRERSDQDDL
Sbjct: 421 CYLIKPSTMTDKEMESPECMKRIKVQEVILSRWVSSRERSDQDDL 465


>gi|13376882 tRNA-intron nuclease 2 isoform 1 [Homo sapiens]
          Length = 465

 Score =  889 bits (2298), Expect = 0.0
 Identities = 439/465 (94%), Positives = 439/465 (94%), Gaps = 26/465 (5%)

Query: 1   MAEAVFHAPKRKRRVYETYESPLPIPFGQDHGPLKEFKIFRAEMINNNVIVRNAEDIEQL 60
           MAEAVFHAPKRKRRVYETYESPLPIPFGQDHGPLKEFKIFRAEMINNNVIVRNAEDIEQL
Sbjct: 1   MAEAVFHAPKRKRRVYETYESPLPIPFGQDHGPLKEFKIFRAEMINNNVIVRNAEDIEQL 60

Query: 61  YGKGYFGKGILSRSRPSFTISDPKLVAKWKDMKTNMPIITSKRYQHSVEWAAELMRRQGQ 120
           YGKGYFGKGILSRSRPSFTISDPKLVAKWKDMKTNMPIITSKRYQHSVEWAAELMRRQGQ
Sbjct: 61  YGKGYFGKGILSRSRPSFTISDPKLVAKWKDMKTNMPIITSKRYQHSVEWAAELMRRQGQ 120

Query: 121 DESTVRRILKDYTKPLEHPPVKRNEEAQVHDKLNSGMVSNMEGTAGGERPSVVNGDSGKS 180
           DESTVRRILKDYTKPLEHPPVKRNEEAQVHDKLNSGMVSNMEGTAGGERPSVVNGDSGKS
Sbjct: 121 DESTVRRILKDYTKPLEHPPVKRNEEAQVHDKLNSGMVSNMEGTAGGERPSVVNGDSGKS 180

Query: 181 GGVGDPREPLGCLQEGSGCHPTTESFEKSVREDASPLPHVCCCKQDALILQRGLHHEDGS 240
           GGVGDPREPLGCLQEGSGCHPTTESFEKSVREDASPLPHVCCCKQDALILQRGLHHEDGS
Sbjct: 181 GGVGDPREPLGCLQEGSGCHPTTESFEKSVREDASPLPHVCCCKQDALILQRGLHHEDGS 240

Query: 241 QHIGLLHPGDRGPDHEYVLVEEAECAMSEREAAPN------------------------- 275
           QHIGLLHPGDRGPDHEYVLVEEAECAMSEREAAPN                         
Sbjct: 241 QHIGLLHPGDRGPDHEYVLVEEAECAMSEREAAPNEELVQRNRLICRRNPYRIFEYLQLS 300

Query: 276 -EEAFFLVYALGCLSIYYEKEPLTIVKLWKAFTVVQPTFRTTYMAYHYFRSKGWVPKVGL 334
            EEAFFLVYALGCLSIYYEKEPLTIVKLWKAFTVVQPTFRTTYMAYHYFRSKGWVPKVGL
Sbjct: 301 LEEAFFLVYALGCLSIYYEKEPLTIVKLWKAFTVVQPTFRTTYMAYHYFRSKGWVPKVGL 360

Query: 335 KYGTDLLLYRKGPPFYHASYSVIIELVDDHFEGSLRRPLSWKSLAALSRVSVNVSKELML 394
           KYGTDLLLYRKGPPFYHASYSVIIELVDDHFEGSLRRPLSWKSLAALSRVSVNVSKELML
Sbjct: 361 KYGTDLLLYRKGPPFYHASYSVIIELVDDHFEGSLRRPLSWKSLAALSRVSVNVSKELML 420

Query: 395 CYLIKPSTMTDKEMESPECMKRIKVQEVILSRWVSSRERSDQDDL 439
           CYLIKPSTMTDKEMESPECMKRIKVQEVILSRWVSSRERSDQDDL
Sbjct: 421 CYLIKPSTMTDKEMESPECMKRIKVQEVILSRWVSSRERSDQDDL 465


>gi|223972638 tRNA-intron nuclease 2 isoform 4 [Homo sapiens]
          Length = 402

 Score =  807 bits (2084), Expect = 0.0
 Identities = 392/398 (98%), Positives = 394/398 (98%), Gaps = 2/398 (0%)

Query: 1   MAEAVFHAPKRKRRVYETYESPLPIPFGQDHGPLKEFKIFRAEMINNNVIVRNAEDIEQL 60
           MAEAVFHAPKRKRRVYETYESPLPIPFGQDHGPLKEFKIFRAEMINNNVIVRNAEDIEQL
Sbjct: 1   MAEAVFHAPKRKRRVYETYESPLPIPFGQDHGPLKEFKIFRAEMINNNVIVRNAEDIEQL 60

Query: 61  YGKGYFGKGILSRSRPSFTISDPKLVAKWKDMKTNMPIITSKRYQHSVEWAAELMRRQGQ 120
           YGKGYFGKGILSRSRPSFTISDPKLVAKWKDMKTNMPIITSKRYQHSVEWAAELMRRQGQ
Sbjct: 61  YGKGYFGKGILSRSRPSFTISDPKLVAKWKDMKTNMPIITSKRYQHSVEWAAELMRRQGQ 120

Query: 121 DESTVRRILKDYTKPLEHPPVKRNEEAQVHDKLNSGMVSNMEGTAGGERPSVVNGDSGKS 180
           DESTVRRILKDYTKPLEHPPVKRNEEAQVHDKLNSGMVSNMEGTAGGERPSVVNGDSGKS
Sbjct: 121 DESTVRRILKDYTKPLEHPPVKRNEEAQVHDKLNSGMVSNMEGTAGGERPSVVNGDSGKS 180

Query: 181 GGVGDPREPLGCLQEGSGCHPTTESFEKSVREDASPLPHVCCCKQDALILQRGLHHEDGS 240
           GGVGDPREPLGCLQEGSGCHPTTESFEKSVREDASPLPHVCCCKQDALILQRGLHHEDGS
Sbjct: 181 GGVGDPREPLGCLQEGSGCHPTTESFEKSVREDASPLPHVCCCKQDALILQRGLHHEDGS 240

Query: 241 QHIGLLHPGDRGPDHEYVLVEEAECAMSEREAAPNEEAFFLVYALGCLSIYYEKEPLTIV 300
           QHIGLLHPGDRGPDHEYVLVEEAECAMSEREAAPNEEAFFLVYALGCLSIYYEKEPLTIV
Sbjct: 241 QHIGLLHPGDRGPDHEYVLVEEAECAMSEREAAPNEEAFFLVYALGCLSIYYEKEPLTIV 300

Query: 301 KLWKAFTVVQPTFRTTYMAYHYFRSKGWVPKVGLKYGTDLLLYRKGPPFYHASYSVIIEL 360
           KLWKAFTVVQPTFRTTYMAYHYFRSKGWVPKVGLKYGTDLLLYRKGPPFYHASYSVIIEL
Sbjct: 301 KLWKAFTVVQPTFRTTYMAYHYFRSKGWVPKVGLKYGTDLLLYRKGPPFYHASYSVIIEL 360

Query: 361 VDDHFEGSLRRPLSWKSLAALSRVSVNVSK--ELMLCY 396
           VDDHFEGSLRRPLSWKSLAALSRVSVNVSK  +  LC+
Sbjct: 361 VDDHFEGSLRRPLSWKSLAALSRVSVNVSKVTQHQLCH 398


>gi|223972636 tRNA-intron nuclease 2 isoform 3 [Homo sapiens]
          Length = 406

 Score =  707 bits (1826), Expect = 0.0
 Identities = 370/465 (79%), Positives = 373/465 (80%), Gaps = 85/465 (18%)

Query: 1   MAEAVFHAPKRKRRVYETYESPLPIPFGQDHGPLKEFKIFRAEMINNNVIVRNAEDIEQL 60
           MAEAVFHAPKRKRRVYETYESPLPIPFGQDHGPLKEFKIFRAEMINNNVIVRNAEDIEQL
Sbjct: 1   MAEAVFHAPKRKRRVYETYESPLPIPFGQDHGPLKEFKIFRAEMINNNVIVRNAEDIEQL 60

Query: 61  YGKGYFGKGILSRSRPSFTISDPKLVAKWKDMKTNMPIITSKRYQHSVEWAAELMRRQGQ 120
           YGKGYFGKGILSRSRPSFTISDPKLVAKWKDMKTNMPIITSKRYQHSVEWAAELMRRQGQ
Sbjct: 61  YGKGYFGKGILSRSRPSFTISDPKLVAKWKDMKTNMPIITSKRYQHSVEWAAELMRRQGQ 120

Query: 121 DESTVRRILKDYTKPLEHPPVKRNEEAQVHDKLNSGMVSNMEGTAGGERPSVVNGDSGKS 180
           DESTVRRILKDYTKPLEHPPVKRNEEAQVHDKLNSG               +V+   G +
Sbjct: 121 DESTVRRILKDYTKPLEHPPVKRNEEAQVHDKLNSG---------------MVSNMEGTA 165

Query: 181 GGVGDPREPLGCLQEGSGCHPTTESFEKSVREDASPLPHVCCCKQDALILQRGLHHEDGS 240
           GG                                   P V           RGLHHEDGS
Sbjct: 166 GG---------------------------------ERPSV-----------RGLHHEDGS 181

Query: 241 QHIGLLHPGDRGPDHEYVLVEEAECAMSEREAAPNEE----------------------- 277
           QHIGLLHPGDRGPDHEYVLVEEAECAMSEREAAPNEE                       
Sbjct: 182 QHIGLLHPGDRGPDHEYVLVEEAECAMSEREAAPNEELVQRNRLICRRNPYRIFEYLQLS 241

Query: 278 ---AFFLVYALGCLSIYYEKEPLTIVKLWKAFTVVQPTFRTTYMAYHYFRSKGWVPKVGL 334
              AFFLVYALGCLSIYYEKEPLTIVKLWKAFTVVQPTFRTTYMAYHYFRSKGWVPKVGL
Sbjct: 242 LEEAFFLVYALGCLSIYYEKEPLTIVKLWKAFTVVQPTFRTTYMAYHYFRSKGWVPKVGL 301

Query: 335 KYGTDLLLYRKGPPFYHASYSVIIELVDDHFEGSLRRPLSWKSLAALSRVSVNVSKELML 394
           KYGTDLLLYRKGPPFYHASYSVIIELVDDHFEGSLRRPLSWKSLAALSRVSVNVSKELML
Sbjct: 302 KYGTDLLLYRKGPPFYHASYSVIIELVDDHFEGSLRRPLSWKSLAALSRVSVNVSKELML 361

Query: 395 CYLIKPSTMTDKEMESPECMKRIKVQEVILSRWVSSRERSDQDDL 439
           CYLIKPSTMTDKEMESPECMKRIKVQEVILSRWVSSRERSDQDDL
Sbjct: 362 CYLIKPSTMTDKEMESPECMKRIKVQEVILSRWVSSRERSDQDDL 406


>gi|116875842 tRNA-intron endonuclease 34 [Homo sapiens]
          Length = 310

 Score = 33.5 bits (75), Expect = 0.39
 Identities = 22/86 (25%), Positives = 34/86 (39%), Gaps = 8/86 (9%)

Query: 310 QPTFRTTYMAYHYFRSKGWVPKVGLKYGTDLLLYRKGPPFYHASYSVIIELVDDHFEGSL 369
           +P     Y  Y     +G+      K+G D L+Y   P  +HA Y       +D      
Sbjct: 214 RPAHELRYSIYRDLWERGFFLSAAGKFGGDFLVYPGDPLRFHAHYIAQCWAPED------ 267

Query: 370 RRPLSWKSLAALSRVSVNVSKELMLC 395
              +  + L A  R+  +V K L+LC
Sbjct: 268 --TIPLQDLVAAGRLGTSVRKTLLLC 291


>gi|116875840 tRNA-intron endonuclease 34 [Homo sapiens]
          Length = 310

 Score = 33.5 bits (75), Expect = 0.39
 Identities = 22/86 (25%), Positives = 34/86 (39%), Gaps = 8/86 (9%)

Query: 310 QPTFRTTYMAYHYFRSKGWVPKVGLKYGTDLLLYRKGPPFYHASYSVIIELVDDHFEGSL 369
           +P     Y  Y     +G+      K+G D L+Y   P  +HA Y       +D      
Sbjct: 214 RPAHELRYSIYRDLWERGFFLSAAGKFGGDFLVYPGDPLRFHAHYIAQCWAPED------ 267

Query: 370 RRPLSWKSLAALSRVSVNVSKELMLC 395
              +  + L A  R+  +V K L+LC
Sbjct: 268 --TIPLQDLVAAGRLGTSVRKTLLLC 291


>gi|122114658 hypothetical protein LOC23053 [Homo sapiens]
          Length = 1842

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 44/155 (28%), Positives = 54/155 (34%), Gaps = 17/155 (10%)

Query: 110 WAAELMRRQGQDESTVRRILKDYTKPLEHPPVKRNEEAQVHDK-LNSGMVSNMEGTAGGE 168
           WA  L  R G   S      +D  +PL   P  R +E     K L  G+ S+  G     
Sbjct: 508 WARALPSRPGASRSGGLEESRDRPRPLPTEPAVRPKEPGTKRKGLGEGVPSSQRGP---R 564

Query: 169 RPSVVNGDSG--KSGGVGDPREPLGCLQEGSGCHPTTESFEKSVREDASPLPHVCCCKQD 226
           R S   GD    K G  G   + LG    GS       S  +   ED+S  P +     D
Sbjct: 565 RLSAEGGDKALHKMGPGGGKAKALGGAGSGSKGSAGGGSKRRLSSEDSSLEPDLAEMSLD 624

Query: 227 ALILQRGLHHEDGSQHIGL--------LHPGDRGP 253
              L  G    + S   G         LH G RGP
Sbjct: 625 DSSLALG---AEASTFGGFPESPPPCPLHGGSRGP 656


>gi|46049114 M-phase phosphoprotein 1 [Homo sapiens]
          Length = 1780

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 13/33 (39%), Positives = 21/33 (63%)

Query: 392 LMLCYLIKPSTMTDKEMESPECMKRIKVQEVIL 424
           L +C  I+P T ++KE+ES  C+  +  Q V+L
Sbjct: 59  LQVCLRIRPFTQSEKELESEGCVHILDSQTVVL 91


>gi|254281232 zinc finger and SCAN domain containing 12 [Homo
           sapiens]
          Length = 611

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 26/120 (21%), Positives = 47/120 (39%), Gaps = 14/120 (11%)

Query: 115 MRRQGQDESTVRRILKDYTKPLEHPPVKRNEEAQVHDKLNSGMVSNMEGTAG------GE 168
           +R++G+   +++ +     +P    P   +++ QV D        N++          G+
Sbjct: 152 LRKEGEPSMSLQSMK---AQPKYESPELESQQEQVLDVETGNEYGNLKQEVSEEMEPHGK 208

Query: 169 RPSVVNGDSGKSGGVGDPREPLGCLQEGSGC-----HPTTESFEKSVREDASPLPHVCCC 223
             S    D  KS   G+ REP    +E S C      PT +    S+ E++    H   C
Sbjct: 209 TSSKFENDMSKSARCGETREPEEITEEPSACSREDKQPTCDENGVSLTENSDHTEHQRIC 268


>gi|4507163 SRY (sex determining region Y)-box 4 [Homo sapiens]
          Length = 474

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 4/44 (9%)

Query: 177 SGKSGGVG---DPREPLGCL-QEGSGCHPTTESFEKSVREDASP 216
           S   GGVG   DP +PLG   +EG+GC P   S        +SP
Sbjct: 306 SSPVGGVGAGADPSDPLGLYEEEGAGCSPDAPSLSGRSSAASSP 349


>gi|239752435 PREDICTED: similar to melanoma antigen family C, 2
           [Homo sapiens]
          Length = 424

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 36/171 (21%), Positives = 57/171 (33%), Gaps = 26/171 (15%)

Query: 186 PREPLGCLQEGSGCHPTTESFEKSVREDASPLPHVCCCKQDAL----------------- 228
           P+ PL        C P  E       EDA P   V  C+ + +                 
Sbjct: 173 PQNPLSSCSSSVSCSPMNEESSSQKEEDAGP---VLACQTEPITESEMLTIVITKYKDYF 229

Query: 229 --ILQRGLHHEDGSQHIGLLHPGDRGPDHEYVLVEEAECAMSEREAAPNEEAFFLVYALG 286
             IL++     +    + L+   + GPDH YV     + A    +     E   L+  L 
Sbjct: 230 PVILEKACEFIELLFGLSLI---EVGPDHFYVFANTVDLADEGSDDTGRPENCLLILILS 286

Query: 287 CLSIYYEKEPLTIV-KLWKAFTVVQPTFRTTYMAYHYFRSKGWVPKVGLKY 336
            + I     P  ++ ++ KA  V        Y       +K WV +  L+Y
Sbjct: 287 VIFITGSCAPEEVIWEVLKAIGVYAGREHFVYGEPRELLTKVWVQEHYLEY 337


>gi|239746952 PREDICTED: similar to melanoma antigen family C, 2
           [Homo sapiens]
          Length = 424

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 36/171 (21%), Positives = 57/171 (33%), Gaps = 26/171 (15%)

Query: 186 PREPLGCLQEGSGCHPTTESFEKSVREDASPLPHVCCCKQDAL----------------- 228
           P+ PL        C P  E       EDA P   V  C+ + +                 
Sbjct: 173 PQNPLSSCSSSVSCSPMNEESSSQKEEDAGP---VLACQTEPITESEMLTIVITKYKDYF 229

Query: 229 --ILQRGLHHEDGSQHIGLLHPGDRGPDHEYVLVEEAECAMSEREAAPNEEAFFLVYALG 286
             IL++     +    + L+   + GPDH YV     + A    +     E   L+  L 
Sbjct: 230 PVILEKACEFIELLFGLSLI---EVGPDHFYVFANTVDLADEGSDDTGRPENCLLILILS 286

Query: 287 CLSIYYEKEPLTIV-KLWKAFTVVQPTFRTTYMAYHYFRSKGWVPKVGLKY 336
            + I     P  ++ ++ KA  V        Y       +K WV +  L+Y
Sbjct: 287 VIFITGSCAPEEVIWEVLKAIGVYAGREHFVYGEPRELLTKVWVQEHYLEY 337


>gi|4557317 annexin A11 [Homo sapiens]
          Length = 505

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 22/66 (33%), Positives = 28/66 (42%), Gaps = 11/66 (16%)

Query: 132 YTKPLEHPPVKRNEEAQVHDKLN----SGMVSNMEGTAGG-ERPSVVNGDSGKS------ 180
           Y  P   PP+  +  A    + N    SGM +NM GT GG   P++  G  G        
Sbjct: 28  YPPPPSMPPIGLDNVATYAGQFNQDYLSGMAANMSGTFGGANMPNLYPGAPGAGYPPVPP 87

Query: 181 GGVGDP 186
           GG G P
Sbjct: 88  GGFGQP 93


>gi|22165433 annexin A11 [Homo sapiens]
          Length = 505

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 22/66 (33%), Positives = 28/66 (42%), Gaps = 11/66 (16%)

Query: 132 YTKPLEHPPVKRNEEAQVHDKLN----SGMVSNMEGTAGG-ERPSVVNGDSGKS------ 180
           Y  P   PP+  +  A    + N    SGM +NM GT GG   P++  G  G        
Sbjct: 28  YPPPPSMPPIGLDNVATYAGQFNQDYLSGMAANMSGTFGGANMPNLYPGAPGAGYPPVPP 87

Query: 181 GGVGDP 186
           GG G P
Sbjct: 88  GGFGQP 93


>gi|22165431 annexin A11 [Homo sapiens]
          Length = 505

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 22/66 (33%), Positives = 28/66 (42%), Gaps = 11/66 (16%)

Query: 132 YTKPLEHPPVKRNEEAQVHDKLN----SGMVSNMEGTAGG-ERPSVVNGDSGKS------ 180
           Y  P   PP+  +  A    + N    SGM +NM GT GG   P++  G  G        
Sbjct: 28  YPPPPSMPPIGLDNVATYAGQFNQDYLSGMAANMSGTFGGANMPNLYPGAPGAGYPPVPP 87

Query: 181 GGVGDP 186
           GG G P
Sbjct: 88  GGFGQP 93


>gi|49087132 sal-like 2 [Homo sapiens]
          Length = 1007

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 23/114 (20%), Positives = 47/114 (41%), Gaps = 12/114 (10%)

Query: 105 QHSVEWAAELMRRQGQDESTVRRILKDYTKPLEHPPVKRNEEAQVHDKLNSGMVSNMEGT 164
           Q +V  A    ++Q Q  S    + ++          +  +E +  D  +   ++     
Sbjct: 739 QSTVSGAGSFPQQQSQQPSPEEELSEEE---------EEEDEEEEEDVTDEDSLAGRGSE 789

Query: 165 AGGERPSVVNGDSGKSGGVGDPREPLGCLQEGSGCHPTTESFEKSVREDASPLP 218
           +GGE+   V GDS ++ G     E +G +   +      +S EK+ ++ + P P
Sbjct: 790 SGGEKAISVRGDSEEASGA---EEEVGTVAAAATAGKEMDSNEKTTQQSSLPPP 840


>gi|112421108 capicua homolog [Homo sapiens]
          Length = 1608

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 42/155 (27%), Positives = 60/155 (38%), Gaps = 32/155 (20%)

Query: 134 KPLEHPPVKRNEE------AQVHDKLNSGMVSNMEGTAGGERPSVVNGDSGKSGGVGDPR 187
           +P  HP      +      A  H++   G      G+A  ERP        +S G G P 
Sbjct: 60  QPASHPVASNQSKEPAESAAVAHERPPGGT-----GSADPERPP--GATCPESPGPGPPH 112

Query: 188 EPLGCLQEGSGCHPTTESFEKSVREDASPLPHVCCCKQDALILQRGLHHEDG-----SQH 242
            PLG ++ G G  PTTE       E+AS  P      +  L  +    H+D      S  
Sbjct: 113 -PLGVVESGKGPPPTTE-------EEASGPP-----GEPRLDSETESDHDDAFLSIMSPE 159

Query: 243 IGL-LHPGDRGPDHEYVLVEEAECAMSEREAAPNE 276
           I L L PG R       L +E + +  +   +PN+
Sbjct: 160 IQLPLPPGKRRTQSLSALPKERDSSSEKDGRSPNK 194


>gi|9256600 protocadherin alpha subfamily C, 2 isoform 1 precursor
           [Homo sapiens]
          Length = 1007

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 25/100 (25%), Positives = 38/100 (38%), Gaps = 4/100 (4%)

Query: 175 GDSGKSGGVGDPREPLGCLQEGSGCHPTTESFEKSVREDASPLPHVCCCKQDALILQRGL 234
           G SG    V D R   G   + +G     ++   S  E   P P      + +  L+ G+
Sbjct: 818 GPSGAQAAVTDSRNLTGQSGQNAGNLIILKNEAVSQNEPRQPNPDW----RYSASLRAGM 873

Query: 235 HHEDGSQHIGLLHPGDRGPDHEYVLVEEAECAMSEREAAP 274
           H     +  G+L  G  GPD ++  V  A       E +P
Sbjct: 874 HSSVHLEEAGILRAGPGGPDQQWPTVSSATPEPEAGEVSP 913


>gi|239743453 PREDICTED: hypothetical protein XP_002342852 [Homo
           sapiens]
          Length = 64

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 4/48 (8%)

Query: 178 GKSGGVGDPREPLGCLQEGSGCHPTTESFEKSVREDASPLPHVCCCKQ 225
           G  GG+GDP   + CL+ G+ CHP      +  +     LP   CCK+
Sbjct: 20  GVFGGIGDP---VTCLKSGAICHPVF-CPRRYKQIGTCGLPGTKCCKK 63


>gi|4826692 defensin, beta 4 precursor [Homo sapiens]
          Length = 64

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 4/48 (8%)

Query: 178 GKSGGVGDPREPLGCLQEGSGCHPTTESFEKSVREDASPLPHVCCCKQ 225
           G  GG+GDP   + CL+ G+ CHP      +  +     LP   CCK+
Sbjct: 20  GVFGGIGDP---VTCLKSGAICHPVF-CPRRYKQIGTCGLPGTKCCKK 63


>gi|38505213 YTH domain containing 2 [Homo sapiens]
          Length = 1430

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 7/93 (7%)

Query: 96   MPIITSKRYQHSVEWAAELMRRQGQDE-STVRRILKDYTKPLEHPPVKRNEEAQVHDKLN 154
            +P+ +S R  +S + +A+    +  DE +T  R+L     P  HPP K  +   +H K  
Sbjct: 1187 LPLASSWRSNNSRKSSADT---EFSDECTTAERVLMKSPSPALHPPQKYKDRGILHPKRG 1243

Query: 155  S---GMVSNMEGTAGGERPSVVNGDSGKSGGVG 184
            +      S+++ T     PS     S  S G G
Sbjct: 1244 TEDRSDQSSLKSTDSSSYPSPCASPSPPSSGKG 1276


>gi|154277120 spectrin repeat containing, nuclear envelope 1 isoform
           3 [Homo sapiens]
          Length = 982

 Score = 29.3 bits (64), Expect = 7.4
 Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 5/54 (9%)

Query: 254 DHEYVLVEEAECAM-----SEREAAPNEEAFFLVYALGCLSIYYEKEPLTIVKL 302
           DH+Y L  + E AM     SE E   +++ F+L  A+G   +   + P   VKL
Sbjct: 448 DHDYDLSRDLESAMSRALPSEDEEGQDDKDFYLRGAVGLSDVMIPESPEAYVKL 501


>gi|23097308 spectrin repeat containing, nuclear envelope 1 isoform 2
            [Homo sapiens]
          Length = 8749

 Score = 29.3 bits (64), Expect = 7.4
 Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 5/54 (9%)

Query: 254  DHEYVLVEEAECAM-----SEREAAPNEEAFFLVYALGCLSIYYEKEPLTIVKL 302
            DH+Y L  + E AM     SE E   +++ F+L  A+G   +   + P   VKL
Sbjct: 8215 DHDYDLSRDLESAMSRALPSEDEEGQDDKDFYLRGAVGLSDVMIPESPEAYVKL 8268


>gi|118498364 dapper 1 isoform 2 [Homo sapiens]
          Length = 799

 Score = 29.3 bits (64), Expect = 7.4
 Identities = 26/107 (24%), Positives = 44/107 (41%), Gaps = 9/107 (8%)

Query: 3   EAVFHAPKRKRRVYETYESPLPIPFGQDHGPLKEFKIFRA--EMINNNVIVRNAEDIEQL 60
           EA+  A + +R     Y +P+P+P+   +  +     + A  E + ++ +V  +ED +  
Sbjct: 652 EALRRARRGRRENVGLYPAPVPLPYASPYAYVASDSEYSAECESLFHSTVVDTSEDEQSN 711

Query: 61  YGKGYFGKGILSRSRPSF-----TISDPKLVAK--WKDMKTNMPIIT 100
           Y    FG    S S   F     T SD +      W      +PI T
Sbjct: 712 YTTNCFGDSESSVSEGEFVGESTTTSDSEESGGLIWSQFVQTLPIQT 758


>gi|24158478 dapper 1 isoform 1 [Homo sapiens]
          Length = 836

 Score = 29.3 bits (64), Expect = 7.4
 Identities = 26/107 (24%), Positives = 44/107 (41%), Gaps = 9/107 (8%)

Query: 3   EAVFHAPKRKRRVYETYESPLPIPFGQDHGPLKEFKIFRA--EMINNNVIVRNAEDIEQL 60
           EA+  A + +R     Y +P+P+P+   +  +     + A  E + ++ +V  +ED +  
Sbjct: 689 EALRRARRGRRENVGLYPAPVPLPYASPYAYVASDSEYSAECESLFHSTVVDTSEDEQSN 748

Query: 61  YGKGYFGKGILSRSRPSF-----TISDPKLVAK--WKDMKTNMPIIT 100
           Y    FG    S S   F     T SD +      W      +PI T
Sbjct: 749 YTTNCFGDSESSVSEGEFVGESTTTSDSEESGGLIWSQFVQTLPIQT 795


>gi|49472835 bridging integrator 2 [Homo sapiens]
          Length = 565

 Score = 29.3 bits (64), Expect = 7.4
 Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 7/115 (6%)

Query: 39  IFRAEM--INNNVIVRNAEDIEQLYGKGYFGKGILSRSRPSFTISDP---KLVAKWKDMK 93
           +F  EM  +N+N+    ++  +Q   K +  KG+ S SR S  IS P     V+      
Sbjct: 219 VFYREMSKLNHNLYEVMSKLEKQHSNKVFVVKGLSSSSRRSLVISPPVRTATVSSPLTSP 278

Query: 94  TNMPIITSKRYQHSVEWAAELM--RRQGQDESTVRRILKDYTKPLEHPPVKRNEE 146
           T+   ++ K    SV    +L     QG+D S ++ +L++     E      +EE
Sbjct: 279 TSPSTLSLKSESESVSATEDLAPDAAQGEDNSEIKELLEEEEIEKEGSEASSSEE 333


>gi|48762750 phosphodiesterase 9A isoform o [Homo sapiens]
          Length = 567

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 13/25 (52%), Positives = 14/25 (56%)

Query: 186 PREPLGCLQEGSGCHPTTESFEKSV 210
           PREP GC QEG    P  E   +SV
Sbjct: 106 PREPQGCYQEGQRIPPEREELIQSV 130


>gi|48762748 phosphodiesterase 9A isoform n [Homo sapiens]
          Length = 552

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 13/25 (52%), Positives = 14/25 (56%)

Query: 186 PREPLGCLQEGSGCHPTTESFEKSV 210
           PREP GC QEG    P  E   +SV
Sbjct: 91  PREPQGCYQEGQRIPPEREELIQSV 115


>gi|48762746 phosphodiesterase 9A isoform m [Homo sapiens]
          Length = 526

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 13/25 (52%), Positives = 14/25 (56%)

Query: 186 PREPLGCLQEGSGCHPTTESFEKSV 210
           PREP GC QEG    P  E   +SV
Sbjct: 65  PREPQGCYQEGQRIPPEREELIQSV 89


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.135    0.410 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,756,339
Number of Sequences: 37866
Number of extensions: 900383
Number of successful extensions: 2439
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 2415
Number of HSP's gapped (non-prelim): 43
length of query: 439
length of database: 18,247,518
effective HSP length: 105
effective length of query: 334
effective length of database: 14,271,588
effective search space: 4766710392
effective search space used: 4766710392
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.