Guide to the Human Genome
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Name: TSEN2 Sequence: fasta or formatted (406aa) NCBI GI: 223972636
Description:

tRNA-intron nuclease 2 isoform 3

Referenced in:

tRNA Enzymes

Other entries for this name:
alt prot [465aa] tRNA-intron nuclease 2 isoform 1
alt prot [465aa] tRNA-intron nuclease 2 isoform 1
alt prot [439aa] tRNA-intron nuclease 2 isoform 2
alt prot [402aa] tRNA-intron nuclease 2 isoform 4
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         21           2
 C cysteine            1.2          5           1
 D aspartate           4.2         17           2
 E glutamate           9.1         37           2
 F phenylalanine       3.4         14           2
 G glycine             5.4         22           2
 H histidine           3.2         13           2
 I isoleucine          4.9         20           2
 K lysine              6.9         28           1
 L leucine             9.1         37           3
 M methionine          3.2         13           1
 N asparagine          3.0         12           3
 P proline             5.9         24           2
 Q glutamine           3.0         12           1
 R arginine            7.9         32           2
 S serine              7.4         30           2
 T threonine           3.7         15           2
 V valine              6.9         28           2
 W tryptophan          1.5          6           1
 Y tyrosine            4.9         20           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tRNA-intron nuclease 2 isoform 3 
TSEN2                 0.930   tRNA-intron nuclease 2 isoform 1 
TSEN2                 0.930   tRNA-intron nuclease 2 isoform 1 
TSEN2                 0.848   tRNA-intron nuclease 2 isoform 2 
TSEN2                 0.725   tRNA-intron nuclease 2 isoform 4 
LOC727838             0.012   PREDICTED: similar to cancer/testis antigen family ...
TSEN34                0.010   tRNA-intron endonuclease 34 
TSEN34                0.010   tRNA-intron endonuclease 34 
LOC727838             0.009   PREDICTED: similar to cancer/testis antigen family ...
LOC727838             0.009   PREDICTED: similar to cancer/testis antigen family ...
KIF20B                0.007   M-phase phosphoprotein 1 
S100A9                0.006   S100 calcium-binding protein A9 
DACT1                 0.005   dapper 1 isoform 2 
DACT1                 0.005   dapper 1 isoform 1 
BIN2                  0.005   bridging integrator 2 
BSN                   0.005   bassoon protein 
UNC45A                0.005   smooth muscle cell associated protein-1 isoform 3 [H...
UNC45A                0.005   smooth muscle cell associated protein-1 isoform 2 [H...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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