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Search of human proteins with 223942018
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|223942018 jumonji domain containing 5 isoform 1 [Homo
sapiens]
(454 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|223942018 jumonji domain containing 5 isoform 1 [Homo sapiens] 941 0.0
gi|223942014 jumonji domain containing 5 isoform 2 [Homo sapiens] 863 0.0
gi|89242134 hypothetical protein LOC129450 [Homo sapiens] 101 1e-21
gi|167860114 jumonji domain containing 7 [Homo sapiens] 94 2e-19
gi|148596936 hypoxia-inducible factor 1, alpha subunit inhibitor... 94 3e-19
gi|21314714 Hspb associated protein 1 [Homo sapiens] 91 3e-18
gi|4826914 JMJD7-PLA2G4B protein [Homo sapiens] 67 4e-11
gi|239788849 jumonji domain containing 4 isoform 2 [Homo sapiens] 50 6e-06
gi|239788847 jumonji domain containing 4 isoform 1 [Homo sapiens] 50 6e-06
gi|56090146 jumonji domain containing 8 [Homo sapiens] 44 4e-04
gi|125988395 jumonji domain containing 6 isoform 1 [Homo sapiens] 40 0.006
gi|125988389 jumonji domain containing 6 isoform 2 [Homo sapiens] 40 0.006
gi|106879206 chromosome 14 open reading frame 169 [Homo sapiens] 37 0.048
gi|4885323 G protein-coupled receptor 37 [Homo sapiens] 32 1.2
gi|169205008 PREDICTED: hypothetical protein [Homo sapiens] 32 1.6
gi|169205607 PREDICTED: hypothetical protein [Homo sapiens] 32 1.6
gi|169204476 PREDICTED: hypothetical protein [Homo sapiens] 32 1.6
gi|4826734 fusion (involved in t(12;16) in malignant liposarcoma... 32 1.6
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa... 32 1.6
gi|33620755 YEATS domain containing 2 [Homo sapiens] 32 1.6
gi|156416026 zinc finger protein 219 [Homo sapiens] 32 1.6
gi|156415998 zinc finger protein 219 [Homo sapiens] 32 1.6
gi|156415996 zinc finger protein 219 [Homo sapiens] 32 1.6
gi|223718074 hydroxysteroid (17-beta) dehydrogenase 1 [Homo sapi... 31 2.0
gi|51944974 tumor suppressor candidate 1 [Homo sapiens] 30 3.5
gi|34787409 hypothetical protein LOC57148 [Homo sapiens] 30 4.5
gi|32880203 cadherin-like 24 isoform 2 [Homo sapiens] 30 4.5
gi|32880206 cadherin-like 24 isoform 1 [Homo sapiens] 30 4.5
gi|27436971 potassium voltage-gated channel, shaker-related subf... 30 4.5
gi|39930351 dynamin binding protein [Homo sapiens] 30 5.9
>gi|223942018 jumonji domain containing 5 isoform 1 [Homo sapiens]
Length = 454
Score = 941 bits (2433), Expect = 0.0
Identities = 454/454 (100%), Positives = 454/454 (100%)
Query: 1 MSREKCSPGEGAEEGRGSEASGLKASAGHGTEPAGGGPMAGDTHCPAEPLAREGTLWEAL 60
MSREKCSPGEGAEEGRGSEASGLKASAGHGTEPAGGGPMAGDTHCPAEPLAREGTLWEAL
Sbjct: 1 MSREKCSPGEGAEEGRGSEASGLKASAGHGTEPAGGGPMAGDTHCPAEPLAREGTLWEAL 60
Query: 61 RALLPHSKEDLKLDLGEKVERSVVTLLQRATELFYEGRRDECLQSSEVILDYSWEKLNTG 120
RALLPHSKEDLKLDLGEKVERSVVTLLQRATELFYEGRRDECLQSSEVILDYSWEKLNTG
Sbjct: 61 RALLPHSKEDLKLDLGEKVERSVVTLLQRATELFYEGRRDECLQSSEVILDYSWEKLNTG 120
Query: 121 TWQDVDKDWRRVYAIGCLLKALCLCQAPEDANTVAAALRVCDMGLLMGAAILGDILLKVA 180
TWQDVDKDWRRVYAIGCLLKALCLCQAPEDANTVAAALRVCDMGLLMGAAILGDILLKVA
Sbjct: 121 TWQDVDKDWRRVYAIGCLLKALCLCQAPEDANTVAAALRVCDMGLLMGAAILGDILLKVA 180
Query: 181 AILQTHLPGKRPARGSLPEQPCTKKARADHGLIPDVKLEKTVPRLHRPSLQHFREQFLVP 240
AILQTHLPGKRPARGSLPEQPCTKKARADHGLIPDVKLEKTVPRLHRPSLQHFREQFLVP
Sbjct: 181 AILQTHLPGKRPARGSLPEQPCTKKARADHGLIPDVKLEKTVPRLHRPSLQHFREQFLVP 240
Query: 241 GRPVILKGVADHWPCMQKWSLEYIQEIAGCRTVPVEVGSRYTDEEWSQTLMTVNEFISKY 300
GRPVILKGVADHWPCMQKWSLEYIQEIAGCRTVPVEVGSRYTDEEWSQTLMTVNEFISKY
Sbjct: 241 GRPVILKGVADHWPCMQKWSLEYIQEIAGCRTVPVEVGSRYTDEEWSQTLMTVNEFISKY 300
Query: 301 IVNEPRDVGYLAQHQLFDQIPELKQDISIPDYCSLGDGEEEEITINAWFGPQGTISPLHQ 360
IVNEPRDVGYLAQHQLFDQIPELKQDISIPDYCSLGDGEEEEITINAWFGPQGTISPLHQ
Sbjct: 301 IVNEPRDVGYLAQHQLFDQIPELKQDISIPDYCSLGDGEEEEITINAWFGPQGTISPLHQ 360
Query: 361 DPQQNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNTSQVDVENPDLEKFPKFAKAPFL 420
DPQQNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNTSQVDVENPDLEKFPKFAKAPFL
Sbjct: 361 DPQQNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNTSQVDVENPDLEKFPKFAKAPFL 420
Query: 421 SCILSPGEILFIPVKYWHYVRALDLSFSVSFWWS 454
SCILSPGEILFIPVKYWHYVRALDLSFSVSFWWS
Sbjct: 421 SCILSPGEILFIPVKYWHYVRALDLSFSVSFWWS 454
>gi|223942014 jumonji domain containing 5 isoform 2 [Homo sapiens]
Length = 416
Score = 863 bits (2231), Expect = 0.0
Identities = 416/416 (100%), Positives = 416/416 (100%)
Query: 39 MAGDTHCPAEPLAREGTLWEALRALLPHSKEDLKLDLGEKVERSVVTLLQRATELFYEGR 98
MAGDTHCPAEPLAREGTLWEALRALLPHSKEDLKLDLGEKVERSVVTLLQRATELFYEGR
Sbjct: 1 MAGDTHCPAEPLAREGTLWEALRALLPHSKEDLKLDLGEKVERSVVTLLQRATELFYEGR 60
Query: 99 RDECLQSSEVILDYSWEKLNTGTWQDVDKDWRRVYAIGCLLKALCLCQAPEDANTVAAAL 158
RDECLQSSEVILDYSWEKLNTGTWQDVDKDWRRVYAIGCLLKALCLCQAPEDANTVAAAL
Sbjct: 61 RDECLQSSEVILDYSWEKLNTGTWQDVDKDWRRVYAIGCLLKALCLCQAPEDANTVAAAL 120
Query: 159 RVCDMGLLMGAAILGDILLKVAAILQTHLPGKRPARGSLPEQPCTKKARADHGLIPDVKL 218
RVCDMGLLMGAAILGDILLKVAAILQTHLPGKRPARGSLPEQPCTKKARADHGLIPDVKL
Sbjct: 121 RVCDMGLLMGAAILGDILLKVAAILQTHLPGKRPARGSLPEQPCTKKARADHGLIPDVKL 180
Query: 219 EKTVPRLHRPSLQHFREQFLVPGRPVILKGVADHWPCMQKWSLEYIQEIAGCRTVPVEVG 278
EKTVPRLHRPSLQHFREQFLVPGRPVILKGVADHWPCMQKWSLEYIQEIAGCRTVPVEVG
Sbjct: 181 EKTVPRLHRPSLQHFREQFLVPGRPVILKGVADHWPCMQKWSLEYIQEIAGCRTVPVEVG 240
Query: 279 SRYTDEEWSQTLMTVNEFISKYIVNEPRDVGYLAQHQLFDQIPELKQDISIPDYCSLGDG 338
SRYTDEEWSQTLMTVNEFISKYIVNEPRDVGYLAQHQLFDQIPELKQDISIPDYCSLGDG
Sbjct: 241 SRYTDEEWSQTLMTVNEFISKYIVNEPRDVGYLAQHQLFDQIPELKQDISIPDYCSLGDG 300
Query: 339 EEEEITINAWFGPQGTISPLHQDPQQNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNT 398
EEEEITINAWFGPQGTISPLHQDPQQNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNT
Sbjct: 301 EEEEITINAWFGPQGTISPLHQDPQQNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNT 360
Query: 399 SQVDVENPDLEKFPKFAKAPFLSCILSPGEILFIPVKYWHYVRALDLSFSVSFWWS 454
SQVDVENPDLEKFPKFAKAPFLSCILSPGEILFIPVKYWHYVRALDLSFSVSFWWS
Sbjct: 361 SQVDVENPDLEKFPKFAKAPFLSCILSPGEILFIPVKYWHYVRALDLSFSVSFWWS 416
>gi|89242134 hypothetical protein LOC129450 [Homo sapiens]
Length = 315
Score = 101 bits (252), Expect = 1e-21
Identities = 69/257 (26%), Positives = 123/257 (47%), Gaps = 39/257 (15%)
Query: 222 VPRLHRPSLQHFREQFLVPGRPVILKGVADHWPCMQKWSLEYIQEIAGCRTVPVEVGS-- 279
VPRL S + F + +P++L+G+ D PC KW+++Y+ ++ G + V + V +
Sbjct: 8 VPRLEGVSREQFMQHLYPQRKPLVLEGI-DLGPCTSKWTVDYLSQVGGKKEVKIHVAAVA 66
Query: 280 ---------------------RYTDEEWSQTLMTVNE-FISKYIVNEPR-DVGYLAQHQL 316
R +E+ + ++ +E + + + +PR DV + +
Sbjct: 67 QMDFISKNFVYRTLPFDQLVQRAAEEKHKEFFVSEDEKYYLRSLGEDPRKDVADIRK--- 123
Query: 317 FDQIPELKQDISIPDYCSLGDGEEEEITINAWFGPQGTISPLHQDPQQNFLVQVMGRKYI 376
Q P LK DI P++ EE+ + G H D N L+QV G+K +
Sbjct: 124 --QFPLLKGDIKFPEFFK----EEQFFSSVFRISSPGLQLWTHYDVMDNLLIQVTGKKRV 177
Query: 377 RLYSPQESGALYPHDTHLLHNTSQVDVENPDLEKFPKFAKAPFLSCILSPGEILFIPVKY 436
L+SP+++ LY T + ++++NPDL K+P F+KA C L G++LFIP +
Sbjct: 178 VLFSPRDAQYLYLKGT----KSEVLNIDNPDLAKYPLFSKARRYECSLEAGDVLFIPALW 233
Query: 437 WHYVRALDLSFSVSFWW 453
+H V + + V+ +W
Sbjct: 234 FHNVISEEFGVGVNIFW 250
>gi|167860114 jumonji domain containing 7 [Homo sapiens]
Length = 316
Score = 94.4 bits (233), Expect = 2e-19
Identities = 71/265 (26%), Positives = 115/265 (43%), Gaps = 34/265 (12%)
Query: 222 VPRLHRPSLQ-HFREQFLVPGRPVILKGVADHWPCMQKWSLEYIQEIAGCRTVPVEV-GS 279
VP L +P HF ++ P RP I++ HWP +QKWSL Y + G V V V
Sbjct: 29 VPYLDKPPTPLHFYRDWVCPNRPCIIRNALQHWPALQKWSLPYFRATVGSTEVSVAVTPD 88
Query: 280 RYTDEEWSQTLMTVNE------FISKYIVNEPRDVGYL-AQHQ---LFDQIPELKQDI-S 328
Y D M E F+ + + G L Q Q L ++P+L D+ S
Sbjct: 89 GYADAVRGDRFMMPAERRLPLSFVLDVLEGRAQHPGVLYVQKQCSNLPSELPQLLPDLES 148
Query: 329 IPDYCSLGDGEEEEITINAWFGPQGTISPLHQDPQQNFLVQVMGRKYI------------ 376
+ S G+ + +N W G ++ LH+D +N V G K+
Sbjct: 149 HVPWASEALGKMPD-AVNFWLGEAAAVTSLHKDHYENLYCVVSGEKHFLFHPPSDRPFIP 207
Query: 377 -RLYSP-----QESGALYPHDTHLLHNTSQVDVE--NPDLEKFPKFAKAPFLSCILSPGE 428
LY+P E G D + + ++ PDL ++P +++A L C + GE
Sbjct: 208 YELYTPATYQLTEEGTFKVVDEEAMEKVPWIPLDPLAPDLARYPSYSQAQALRCTVRAGE 267
Query: 429 ILFIPVKYWHYVRALDLSFSVSFWW 453
+L++P ++H+V+ +V+FW+
Sbjct: 268 MLYLPALWFHHVQQSQGCIAVNFWY 292
>gi|148596936 hypoxia-inducible factor 1, alpha subunit inhibitor
[Homo sapiens]
Length = 349
Score = 93.6 bits (231), Expect = 3e-19
Identities = 72/261 (27%), Positives = 120/261 (45%), Gaps = 30/261 (11%)
Query: 220 KTVPRLHRPSLQHFREQFLVPGRPVILKGVADHWPCMQKWSLEYIQEIAGCRTVPVEVGS 279
+ +PRL + + E+ + PV+L +P + KW LEY+QE G V S
Sbjct: 40 RPIPRLSQSDPR--AEELIENEEPVVLTDTNLVYPAL-KWDLEYLQENIGNGDFSVYSAS 96
Query: 280 R----YTDEEWSQTL-----------MTVNEFISKY--IVNEPRDVGYLAQHQLFDQIP- 321
Y DE+ M +EF+ K I + Q L D +
Sbjct: 97 THKFLYYDEKKMANFQNFKPRSNREEMKFHEFVEKLQDIQQRGGEERLYLQQTLNDTVGR 156
Query: 322 ELKQDISIPDYCSLGDGEEE----EITINAWF-GPQGTISPLHQDPQQNFLVQVMGRKYI 376
++ D ++ + + + ++T N G +G ++P H D QQNF Q+ G K
Sbjct: 157 KIVMDFLGFNWNWINKQQGKRGWGQLTSNLLLIGMEGNVTPAHYDEQQNFFAQIKGYKRC 216
Query: 377 RLYSPQESGALYPHDTHL-LHNTSQVDVENPDLEKFPKFAKAPFLSCILSPGEILFIPVK 435
L+ P + LYP+ H SQVD +NPD E+FP F ++ PG++L+IP+
Sbjct: 217 ILFPPDQFECLYPYPVHHPCDRQSQVDFDNPDYERFPNFQNVVGYETVVGPGDVLYIPMY 276
Query: 436 YWHYVRAL---DLSFSVSFWW 453
+WH++ +L ++ +V+FW+
Sbjct: 277 WWHHIESLLNGGITITVNFWY 297
>gi|21314714 Hspb associated protein 1 [Homo sapiens]
Length = 488
Score = 90.5 bits (223), Expect = 3e-18
Identities = 65/235 (27%), Positives = 114/235 (48%), Gaps = 28/235 (11%)
Query: 242 RPVILKGVADHWPCMQKWSLEYIQEIAGCRTVPVEVG--SRYTDEEWSQTLMTVNEFISK 299
+P I + WP + W+ +Y+ ++ + + +G S T ++ T V + +
Sbjct: 42 QPAIFCNMVFDWPA-RHWNAKYLSQVLHGKQIRFRMGMKSMSTVPQFETTCNYVEATLEE 100
Query: 300 YI--------VNEP-RD---------VGYLAQHQLFDQIPELKQDISIPDYCSLGDGEEE 341
++ ++ P RD Y LF+ +L QD+ D+ G +E
Sbjct: 101 FLTWNCDQSSISGPFRDYDHSKFWAYADYKYFVSLFEDKTDLFQDVKWSDFGFPGRNGQE 160
Query: 342 EITINAWFGPQGTISPLHQDPQQ-NFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNT-- 398
W G G +P H D N + QV GRK L+ P+++ LYP ++
Sbjct: 161 S---TLWIGSLGAHTPCHLDSYGCNLVFQVQGRKRWHLFPPEDTPFLYPTRIPYEESSVF 217
Query: 399 SQVDVENPDLEKFPKFAKAPFLSCILSPGEILFIPVKYWHYVRALD-LSFSVSFW 452
S+++V NPDL++FP+F KA + LSPG++LF+P +WHYV ++D ++ S++ W
Sbjct: 218 SKINVVNPDLKRFPQFRKAQRHAVTLSPGQVLFVPRHWWHYVESIDPVTVSINSW 272
>gi|4826914 JMJD7-PLA2G4B protein [Homo sapiens]
Length = 1012
Score = 66.6 bits (161), Expect = 4e-11
Identities = 50/175 (28%), Positives = 75/175 (42%), Gaps = 14/175 (8%)
Query: 222 VPRLHRPSLQ-HFREQFLVPGRPVILKGVADHWPCMQKWSLEYIQEIAGCRTVPVEV-GS 279
VP L +P HF ++ P RP I++ HWP +QKWSL Y + G V V V
Sbjct: 29 VPYLDKPPTPLHFYRDWVCPNRPCIIRNALQHWPALQKWSLPYFRATVGSTEVSVAVTPD 88
Query: 280 RYTDEEWSQTLMTVNE------FISKYIVNEPRDVGYL-AQHQ---LFDQIPELKQDI-S 328
Y D M E F+ + + G L Q Q L ++P+L D+ S
Sbjct: 89 GYADAVRGDRFMMPAERRLPLSFVLDVLEGRAQHPGVLYVQKQCSNLPSELPQLLPDLES 148
Query: 329 IPDYCSLGDGEEEEITINAWFGPQGTISPLHQDPQQNFLVQVMGRKYIRLYSPQE 383
+ S G+ + +N W G ++ LH+D +N V G K+ + P +
Sbjct: 149 HVPWASEALGKMPD-AVNFWLGEAAAVTSLHKDHYENLYCVVSGEKHFLFHPPSD 202
>gi|239788849 jumonji domain containing 4 isoform 2 [Homo sapiens]
Length = 447
Score = 49.7 bits (117), Expect = 6e-06
Identities = 63/251 (25%), Positives = 98/251 (39%), Gaps = 32/251 (12%)
Query: 229 SLQHFREQFLVPGRPVILKGV-ADHWPCMQKW-------SLEYIQEIAGCRTVPVEVGSR 280
S F FL+P P + W ++W +++ G VPV
Sbjct: 86 SYADFVRGFLLPNLPCVFSSAFTQGWGSRRRWVTPAGRPDFDHLLRTYGDVVVPVANCGV 145
Query: 281 YTDEEWSQTLMTVNEFIS---KYI---VNEPRDVGYLAQHQLFDQIPELKQDISIPDYCS 334
+ MT+ ++I+ +YI + PR YL L P ++ ++P Y S
Sbjct: 146 QEYNSNPKEHMTLRDYITYWKEYIQAGYSSPRGCLYLKDWHLCRDFP-VEDVFTLPVYFS 204
Query: 335 ------LGDGEEEEITINAWFGPQGTISPLHQDPQQNFL--VQVMGRKYIRLYSPQESGA 386
D + + + GP G+ SP H D ++F V V GRK L+ P + A
Sbjct: 205 SDWLNEFWDALDVDDYRFVYAGPAGSWSPFHADIFRSFSWSVNVCGRKKWLLFPPGQEEA 264
Query: 387 LYPHDTHLLHNTSQVDVENP---DLEKFPKFAKA-PFLSCILSPGEILFIPVKYWHYVRA 442
L H DV +P D P+ A P L GE++F+P + H V
Sbjct: 265 LRDR-----HGNLPYDVTSPALCDTHLHPRNQLAGPPLEITQEAGEMVFVPSGWHHQVHN 319
Query: 443 LDLSFSVSFWW 453
LD + S++ W
Sbjct: 320 LDDTISINHNW 330
>gi|239788847 jumonji domain containing 4 isoform 1 [Homo sapiens]
Length = 463
Score = 49.7 bits (117), Expect = 6e-06
Identities = 63/251 (25%), Positives = 98/251 (39%), Gaps = 32/251 (12%)
Query: 229 SLQHFREQFLVPGRPVILKGV-ADHWPCMQKW-------SLEYIQEIAGCRTVPVEVGSR 280
S F FL+P P + W ++W +++ G VPV
Sbjct: 86 SYADFVRGFLLPNLPCVFSSAFTQGWGSRRRWVTPAGRPDFDHLLRTYGDVVVPVANCGV 145
Query: 281 YTDEEWSQTLMTVNEFIS---KYI---VNEPRDVGYLAQHQLFDQIPELKQDISIPDYCS 334
+ MT+ ++I+ +YI + PR YL L P ++ ++P Y S
Sbjct: 146 QEYNSNPKEHMTLRDYITYWKEYIQAGYSSPRGCLYLKDWHLCRDFP-VEDVFTLPVYFS 204
Query: 335 ------LGDGEEEEITINAWFGPQGTISPLHQDPQQNFL--VQVMGRKYIRLYSPQESGA 386
D + + + GP G+ SP H D ++F V V GRK L+ P + A
Sbjct: 205 SDWLNEFWDALDVDDYRFVYAGPAGSWSPFHADIFRSFSWSVNVCGRKKWLLFPPGQEEA 264
Query: 387 LYPHDTHLLHNTSQVDVENP---DLEKFPKFAKA-PFLSCILSPGEILFIPVKYWHYVRA 442
L H DV +P D P+ A P L GE++F+P + H V
Sbjct: 265 LRDR-----HGNLPYDVTSPALCDTHLHPRNQLAGPPLEITQEAGEMVFVPSGWHHQVHN 319
Query: 443 LDLSFSVSFWW 453
LD + S++ W
Sbjct: 320 LDDTISINHNW 330
>gi|56090146 jumonji domain containing 8 [Homo sapiens]
Length = 285
Score = 43.5 bits (101), Expect = 4e-04
Identities = 48/214 (22%), Positives = 82/214 (38%), Gaps = 22/214 (10%)
Query: 242 RPVILKGVADHWPCMQKWSLEYIQEIAGCRTVPVEVGSRYTDEEWSQTLMTVNEFISKYI 301
RPVIL+G+ D+ S + + G R V + + Y+ + + + E++ + +
Sbjct: 85 RPVILQGLTDNSRFRALCSRDRLLASFGDRVVRLSTANTYS---YHKVDLPFQEYVEQLL 141
Query: 302 -VNEPRDVG----YLAQHQLFDQIPELKQDISIPDYCSLGDGEEEEITINAWFGPQGTIS 356
+P +G Y F + L + S P + LG I G+
Sbjct: 142 HPQDPTSLGNDTLYFFGDNNFTEWASLFRHYSPPPFGLLGTAPAYSFGIAG----AGSGV 197
Query: 357 PLHQDPQQNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNTSQVDVENPDLEKFPKFAK 416
P H + + GRK LY P+++ +P+ T L P
Sbjct: 198 PFHWHGP-GYSEVIYGRKRWFLYPPEKTPEFHPNKTTLAWLRDTYPALPPSARP------ 250
Query: 417 APFLSCILSPGEILFIPVKYWHYVRALDLSFSVS 450
L C + GE+L+ P ++WH LD S +S
Sbjct: 251 ---LECTIRAGEVLYFPDRWWHATLNLDTSVFIS 281
>gi|125988395 jumonji domain containing 6 isoform 1 [Homo sapiens]
Length = 414
Score = 39.7 bits (91), Expect = 0.006
Identities = 56/244 (22%), Positives = 99/244 (40%), Gaps = 35/244 (14%)
Query: 229 SLQHFREQFLVPGRPVILKGVADHWPCMQKWSLEYIQEIAGCRTVPVEVGSRYTDEEWSQ 288
S++ F E++ P +PV+L + W +KW+LE ++ R + G D +
Sbjct: 55 SVEEFVERYERPYKPVVLLNAQEGWSAQEKWTLERLKR--KYRNQKFKCGE---DNDGYS 109
Query: 289 TLMTVNEFISKYIVNEPRDVGYLAQHQLFDQIP---ELKQDISIPDYCS---LGDGEEEE 342
M + +I +Y+ + D + + P +L +D +P + + E+
Sbjct: 110 VKMKMKYYI-EYMESTRDDSPLYIFDSSYGEHPKRRKLLEDYKVPKFFTDDLFQYAGEKR 168
Query: 343 ITINAWF--GPQGTISPLHQDP----QQNFLVQVMGRKYIRLY---SPQE-------SGA 386
WF GP + + +H DP N LVQ G K L+ +P+E G
Sbjct: 169 RPPYRWFVMGPPRSGTGIHIDPLGTSAWNALVQ--GHKRWCLFPTSTPRELIKVTRDEGG 226
Query: 387 LYPHDTHLLHNTSQVDVENPDLEKFPKFAKAPFLSCILSPGEILFIPVKYWHYVRALDLS 446
+ N + P P+F L + PGE +F+P +WH V LD +
Sbjct: 227 NQQDEAITWFNVIYPRTQLPTWP--PEFKP---LEILQKPGETVFVPGGWWHVVLNLDTT 281
Query: 447 FSVS 450
+++
Sbjct: 282 IAIT 285
>gi|125988389 jumonji domain containing 6 isoform 2 [Homo sapiens]
Length = 403
Score = 39.7 bits (91), Expect = 0.006
Identities = 56/244 (22%), Positives = 99/244 (40%), Gaps = 35/244 (14%)
Query: 229 SLQHFREQFLVPGRPVILKGVADHWPCMQKWSLEYIQEIAGCRTVPVEVGSRYTDEEWSQ 288
S++ F E++ P +PV+L + W +KW+LE ++ R + G D +
Sbjct: 55 SVEEFVERYERPYKPVVLLNAQEGWSAQEKWTLERLKR--KYRNQKFKCGE---DNDGYS 109
Query: 289 TLMTVNEFISKYIVNEPRDVGYLAQHQLFDQIP---ELKQDISIPDYCS---LGDGEEEE 342
M + +I +Y+ + D + + P +L +D +P + + E+
Sbjct: 110 VKMKMKYYI-EYMESTRDDSPLYIFDSSYGEHPKRRKLLEDYKVPKFFTDDLFQYAGEKR 168
Query: 343 ITINAWF--GPQGTISPLHQDP----QQNFLVQVMGRKYIRLY---SPQE-------SGA 386
WF GP + + +H DP N LVQ G K L+ +P+E G
Sbjct: 169 RPPYRWFVMGPPRSGTGIHIDPLGTSAWNALVQ--GHKRWCLFPTSTPRELIKVTRDEGG 226
Query: 387 LYPHDTHLLHNTSQVDVENPDLEKFPKFAKAPFLSCILSPGEILFIPVKYWHYVRALDLS 446
+ N + P P+F L + PGE +F+P +WH V LD +
Sbjct: 227 NQQDEAITWFNVIYPRTQLPTWP--PEFKP---LEILQKPGETVFVPGGWWHVVLNLDTT 281
Query: 447 FSVS 450
+++
Sbjct: 282 IAIT 285
>gi|106879206 chromosome 14 open reading frame 169 [Homo sapiens]
Length = 641
Score = 36.6 bits (83), Expect = 0.048
Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 14/86 (16%)
Query: 359 HQDPQQNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNTSQVDVENPDLEKFPKFAKAP 418
H D + F++Q+ GRK R+Y P+ T L TS + DL + P
Sbjct: 340 HYDDIEAFVLQLEGRKLWRVYRPRV-------PTEELALTSSPNFSQDDLGE-------P 385
Query: 419 FLSCILSPGEILFIPVKYWHYVRALD 444
L +L PG++L+ P + H D
Sbjct: 386 VLQTVLEPGDLLYFPRGFIHQAECQD 411
>gi|4885323 G protein-coupled receptor 37 [Homo sapiens]
Length = 613
Score = 32.0 bits (71), Expect = 1.2
Identities = 37/106 (34%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 7 SPGEGAEEGRGSEASGLKASAGHGTEPAGGGPMAGDT-HCPAEPLAREGTLWEALRALLP 65
+PG GRG+EAS G T P G G P+E L R AL+ L
Sbjct: 91 APGRDPAAGRGAEASA-AGPPGPPTRPPGPWRWKGARGQEPSETLGRGNP--TALQLFLQ 147
Query: 66 HSKEDLKLDLGEKV-----ERSVVTLLQRATELFYEGRRDECLQSS 106
S+E+ K G + E+SV T + A++LFY RR LQ S
Sbjct: 148 ISEEEEKGPRGAGISGRSQEQSVKT-VPGASDLFYWPRRAGKLQGS 192
>gi|169205008 PREDICTED: hypothetical protein [Homo sapiens]
Length = 234
Score = 31.6 bits (70), Expect = 1.6
Identities = 24/76 (31%), Positives = 27/76 (35%), Gaps = 15/76 (19%)
Query: 8 PGEGAEEGRGSEASGLKASAGHGTEPAG--------------GGPMAGDTHCPAEPLARE 53
PG + GRG SG++A G G E AG G DT P A
Sbjct: 149 PGGSGDRGRGGRGSGVRAGPG-GAEAAGEGEAREGRGLAVSVSGTSVSDTATDTRPWAEA 207
Query: 54 GTLWEALRALLPHSKE 69
L E R H KE
Sbjct: 208 DLLREWRRVAKQHLKE 223
>gi|169205607 PREDICTED: hypothetical protein [Homo sapiens]
Length = 234
Score = 31.6 bits (70), Expect = 1.6
Identities = 24/76 (31%), Positives = 27/76 (35%), Gaps = 15/76 (19%)
Query: 8 PGEGAEEGRGSEASGLKASAGHGTEPAG--------------GGPMAGDTHCPAEPLARE 53
PG + GRG SG++A G G E AG G DT P A
Sbjct: 149 PGGSGDRGRGGRGSGVRAGPG-GAEAAGEGEAREGRGLAVSVSGTSVSDTATDTRPWAEA 207
Query: 54 GTLWEALRALLPHSKE 69
L E R H KE
Sbjct: 208 DLLREWRRVAKQHLKE 223
>gi|169204476 PREDICTED: hypothetical protein [Homo sapiens]
Length = 234
Score = 31.6 bits (70), Expect = 1.6
Identities = 24/76 (31%), Positives = 27/76 (35%), Gaps = 15/76 (19%)
Query: 8 PGEGAEEGRGSEASGLKASAGHGTEPAG--------------GGPMAGDTHCPAEPLARE 53
PG + GRG SG++A G G E AG G DT P A
Sbjct: 149 PGGSGDRGRGGRGSGVRAGPG-GAEAAGEGEAREGRGLAVSVSGTSVSDTATDTRPWAEA 207
Query: 54 GTLWEALRALLPHSKE 69
L E R H KE
Sbjct: 208 DLLREWRRVAKQHLKE 223
>gi|4826734 fusion (involved in t(12;16) in malignant liposarcoma)
[Homo sapiens]
Length = 526
Score = 31.6 bits (70), Expect = 1.6
Identities = 17/43 (39%), Positives = 18/43 (41%), Gaps = 5/43 (11%)
Query: 9 GEGAEEGRGSEASGLKASAGHGTEPAGGG-----PMAGDTHCP 46
G G GRG G G G P+GGG AGD CP
Sbjct: 387 GRGGPMGRGGYGGGGSGGGGRGGFPSGGGGGGGQQRAGDWKCP 429
>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
sapiens]
Length = 2715
Score = 31.6 bits (70), Expect = 1.6
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 7/51 (13%)
Query: 10 EGAEEGRGSEASGLKASAGHGTEPAGGGPM-------AGDTHCPAEPLARE 53
+G ++G SEA ++ G GT P+G G + AGD P E L E
Sbjct: 2062 DGVDDGTDSEAEAVQQPRGQGTPPSGPGVVRAGVLGAAGDRARPPEDLPSE 2112
>gi|33620755 YEATS domain containing 2 [Homo sapiens]
Length = 1422
Score = 31.6 bits (70), Expect = 1.6
Identities = 18/48 (37%), Positives = 19/48 (39%)
Query: 2 SREKCSPGEGAEEGRGSEASGLKASAGHGTEPAGGGPMAGDTHCPAEP 49
S S G GA G G G S G G+ GGG G T A P
Sbjct: 793 SGSAASGGSGAGGGGGGGGGGGSGSGGGGSTGGGGGTAGGGTQSTAGP 840
>gi|156416026 zinc finger protein 219 [Homo sapiens]
Length = 722
Score = 31.6 bits (70), Expect = 1.6
Identities = 19/46 (41%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Query: 3 REKCSPGEGAEEGRGSEASGLKAS--AGHGTEPAGGGPMAGDTHCP 46
R+ SPG GRG EA L S AG G E GG + CP
Sbjct: 607 RKPASPGRTLRNGRGGEAEPLDLSLRAGPGGEAGPGGALHRCLFCP 652
>gi|156415998 zinc finger protein 219 [Homo sapiens]
Length = 722
Score = 31.6 bits (70), Expect = 1.6
Identities = 19/46 (41%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Query: 3 REKCSPGEGAEEGRGSEASGLKAS--AGHGTEPAGGGPMAGDTHCP 46
R+ SPG GRG EA L S AG G E GG + CP
Sbjct: 607 RKPASPGRTLRNGRGGEAEPLDLSLRAGPGGEAGPGGALHRCLFCP 652
>gi|156415996 zinc finger protein 219 [Homo sapiens]
Length = 722
Score = 31.6 bits (70), Expect = 1.6
Identities = 19/46 (41%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Query: 3 REKCSPGEGAEEGRGSEASGLKAS--AGHGTEPAGGGPMAGDTHCP 46
R+ SPG GRG EA L S AG G E GG + CP
Sbjct: 607 RKPASPGRTLRNGRGGEAEPLDLSLRAGPGGEAGPGGALHRCLFCP 652
>gi|223718074 hydroxysteroid (17-beta) dehydrogenase 1 [Homo
sapiens]
Length = 328
Score = 31.2 bits (69), Expect = 2.0
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Query: 50 LAREGTLWEALRALL--PHSKEDLKLDLGEKVERSVVTLLQRATE 92
L +G LWEA RAL P S E L+LD+ + +SV +R TE
Sbjct: 40 LKTQGRLWEAARALACPPGSLETLQLDVRD--SKSVAAARERVTE 82
>gi|51944974 tumor suppressor candidate 1 [Homo sapiens]
Length = 212
Score = 30.4 bits (67), Expect = 3.5
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Query: 3 REKCSPGEGAEEGRGSEASGLKASAGHGTEPAGGGPMAG 41
R C G+GA +GRG SG A G P+GGG G
Sbjct: 14 RGSCCGGDGAADGRGPGRSG---RARGGGSPSGGGGGVG 49
>gi|34787409 hypothetical protein LOC57148 [Homo sapiens]
Length = 1494
Score = 30.0 bits (66), Expect = 4.5
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 11/55 (20%)
Query: 299 KYIVNEPR-----DVG--YLAQHQLF----DQIPELKQDISIPDYCSLGDGEEEE 342
K V EPR DVG Y +H+ F D+IP +K D+SIPD + E EE
Sbjct: 1003 KLFVPEPRPVPKNDVGFKYSVKHRPFPEEVDKIPFVKADLSIPDLHEIVTEELEE 1057
>gi|32880203 cadherin-like 24 isoform 2 [Homo sapiens]
Length = 781
Score = 30.0 bits (66), Expect = 4.5
Identities = 23/50 (46%), Positives = 26/50 (52%), Gaps = 8/50 (16%)
Query: 14 EGRGSEASGLKASAGHGTEPAGGGPMAGDTHCPAEPLAREGTLWEALRAL 63
EGRGS L +S G G+E AGG P PAEPL G L+ L L
Sbjct: 731 EGRGSSCGSL-SSLGSGSE-AGGAPG------PAEPLDDWGPLFRTLAEL 772
>gi|32880206 cadherin-like 24 isoform 1 [Homo sapiens]
Length = 819
Score = 30.0 bits (66), Expect = 4.5
Identities = 23/50 (46%), Positives = 26/50 (52%), Gaps = 8/50 (16%)
Query: 14 EGRGSEASGLKASAGHGTEPAGGGPMAGDTHCPAEPLAREGTLWEALRAL 63
EGRGS L +S G G+E AGG P PAEPL G L+ L L
Sbjct: 769 EGRGSSCGSL-SSLGSGSE-AGGAPG------PAEPLDDWGPLFRTLAEL 810
>gi|27436971 potassium voltage-gated channel, shaker-related
subfamily, beta member 3 [Homo sapiens]
Length = 404
Score = 30.0 bits (66), Expect = 4.5
Identities = 22/56 (39%), Positives = 23/56 (41%), Gaps = 8/56 (14%)
Query: 6 CSPGEGAEEGRGSEASGLKASAGHGTEPAGG--GPMAGDTHCPAEPLAREGTLWEA 59
C P G G G A G GHG P GG GP A P P A G L E+
Sbjct: 22 CGPRPGPGGGNGGPAGG-----GHGNPPGGGGSGPKARAALVPRPP-APAGALRES 71
>gi|39930351 dynamin binding protein [Homo sapiens]
Length = 1577
Score = 29.6 bits (65), Expect = 5.9
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 182 ILQTHLPGKRPARGSLPEQPCTKKARADHGLIPDVKLEKTVPRLHRPS 229
I + LP +R A P +PCT + + H L+ D L+ P + RPS
Sbjct: 596 ITEQELPERRKALRPPPPRPCTPVSTSPH-LLVDQNLKPAPPLVVRPS 642
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.137 0.430
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,601,498
Number of Sequences: 37866
Number of extensions: 954315
Number of successful extensions: 3089
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 3053
Number of HSP's gapped (non-prelim): 43
length of query: 454
length of database: 18,247,518
effective HSP length: 106
effective length of query: 348
effective length of database: 14,233,722
effective search space: 4953335256
effective search space used: 4953335256
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.