Guide to the Human Genome
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Name: JMJD7-PLA2G4B Sequence: fasta or formatted (1012aa) NCBI GI: 4826914
Description:

JMJD7-PLA2G4B protein

Referenced in:

Lipid Metabolism

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         78           3
 C cysteine            2.4         24           1
 D aspartate           4.4         45           2
 E glutamate           7.9         80           2
 F phenylalanine       4.4         45           2
 G glycine             5.4         55           3
 H histidine           3.2         32           1
 I isoleucine          2.0         20           2
 K lysine              3.2         32           2
 L leucine            13.1        133           2
 M methionine          1.1         11           2
 N asparagine          2.7         27           2
 P proline             7.5         76           2
 Q glutamine           5.8         59           2
 R arginine            6.1         62           3
 S serine              6.9         70           3
 T threonine           4.8         49           2
 V valine              6.5         66           2
 W tryptophan          1.9         19           1
 Y tyrosine            2.9         29           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   JMJD7-PLA2G4B protein 
PLA2G4B               0.764   phospholipase A2, group IVB 
PLA2G4D               0.361   phospholipase A2, group IVD 
PLA2G4E               0.294   phospholipase A2, group 4E 
PLA2G4F               0.272   phospholipase A2, group IVF 
JMJD7                 0.227   jumonji domain containing 7 
PLA2G4A               0.105   cytosolic phospholipase A2, group IVA 
PLA2G4C               0.068   phospholipase A2, group IVC isoform 3 
PLA2G4C               0.068   phospholipase A2, group IVC isoform 2 precursor [Ho...
PLA2G4C               0.068   phospholipase A2, group IVC isoform 1 precursor [Ho...
JMJD5                 0.020   jumonji domain containing 5 isoform 1 
JMJD5                 0.020   jumonji domain containing 5 isoform 2 
SYT7                  0.016   synaptotagmin VII 
NEDD4L                0.014   neural precursor cell expressed, developmentally do...
NEDD4L                0.014   neural precursor cell expressed, developmentally do...
SYT6                  0.014   synaptotagmin VI 
NEDD4L                0.014   neural precursor cell expressed, developmentally dow...
NEDD4L                0.014   neural precursor cell expressed, developmentally do...
NEDD4                 0.014   neural precursor cell expressed, developmentally do...
LOC100132214          0.013   PREDICTED: similar to calcium-promoted Ras inactiva...
LOC100132214          0.013   PREDICTED: similar to calcium-promoted Ras inactiva...
LOC100132214          0.013   PREDICTED: similar to calcium-promoted Ras inactiva...
LOC100132214          0.013   PREDICTED: similar to calcium-promoted Ras inactiva...
RASA4                 0.013   RAS p21 protein activator 4 isoform 2 
RASA4                 0.013   RAS p21 protein activator 4 isoform 1 
UNC13A                0.012   unc-13 homolog A 
UNC13B                0.012   UNC13 (C. elegans)-like 
UNC13C                0.012   unc-13 homolog C 
SYT10                 0.011   synaptotagmin X 
MCTP2                 0.011   multiple C2 domains, transmembrane 2 isoform 2 [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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