Guide to the Human Genome
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Name: C14orf169 Sequence: fasta or formatted (641aa) NCBI GI: 106879206
Description:

chromosome 14 open reading frame 169

Referenced in:

Myc and Related Functions

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.9         70           3
 C cysteine            0.9          6           1
 D aspartate           5.3         34           2
 E glutamate           6.7         43           2
 F phenylalanine       3.1         20           1
 G glycine             6.2         40           2
 H histidine           2.5         16           1
 I isoleucine          1.7         11           1
 K lysine              1.7         11           1
 L leucine            12.6         81           3
 M methionine          1.9         12           1
 N asparagine          2.2         14           1
 P proline             8.0         51           2
 Q glutamine           5.0         32           2
 R arginine            8.9         57           3
 S serine              6.6         42           2
 T threonine           4.5         29           2
 V valine              7.0         45           2
 W tryptophan          1.2          8           1
 Y tyrosine            3.0         19           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   chromosome 14 open reading frame 169 
MINA                  0.152   MYC induced nuclear antigen isoform a 
MINA                  0.152   MYC induced nuclear antigen isoform a 
MINA                  0.151   MYC induced nuclear antigen isoform b 
KRTAP4-6              0.019   PREDICTED: keratin associated protein 4.6 
KRTAP4-9              0.011   PREDICTED: keratin associated protein 4-9 
JMJD5                 0.010   jumonji domain containing 5 isoform 1 
JMJD5                 0.010   jumonji domain containing 5 isoform 2 
HSPBAP1               0.010   Hspb associated protein 1 
TMPRSS13              0.009   transmembrane protease, serine 13 
IRS1                  0.008   insulin receptor substrate 1 
ANKRD11               0.008   ankyrin repeat domain 11 
FLJ22184              0.008   PREDICTED: hypothetical protein FLJ22184 
FAM48B1               0.008   hypothetical protein LOC100130302 
BCORL1                0.008   BCL6 co-repressor-like 1 
NOTCH3                0.007   Notch homolog 3 
LOC440829             0.007   PREDICTED: transmembrane protein 46-like 
EPN1                  0.007   epsin 1 isoform c 
EPN1                  0.007   epsin 1 isoform a 
C4orf40               0.007   hypothetical protein LOC401137 
MUC17                 0.006   mucin 17 
FOXD1                 0.006   forkhead box D1 
LOC100289661          0.006   PREDICTED: hypothetical protein 
RINL                  0.006   Ras and Rab interactor-like 
NES                   0.006   nestin 
NCKIPSD               0.006   NCK interacting protein with SH3 domain isoform 1 [Ho...
LOC100131880          0.006   PREDICTED: hypothetical protein 
LOC100289661          0.006   PREDICTED: hypothetical protein XP_002343723 
EPN1                  0.006   epsin 1 isoform b 
C6orf174              0.006   hypothetical protein LOC387104 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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