Guide to the Human Genome
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Name: PTPN3 Sequence: fasta or formatted (581aa) NCBI GI: 223941891
Description:

protein tyrosine phosphatase, non-receptor type 3 isoform 6

Referenced in:

Cytoskeleton
Protein Tyrosine Phosphatases

Other entries for this name:
alt prot [913aa] protein tyrosine phosphatase, non-receptor type 3 isoform 1
alt prot [868aa] protein tyrosine phosphatase, non-receptor type 3 isoform 2
alt prot [782aa] protein tyrosine phosphatase, non-receptor type 3 isoform 3
alt prot [737aa] protein tyrosine phosphatase, non-receptor type 3 isoform 4
alt prot [626aa] protein tyrosine phosphatase, non-receptor type 3 isoform 5
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.6         27           2
 C cysteine            2.2         13           1
 D aspartate           6.5         38           2
 E glutamate           6.4         37           2
 F phenylalanine       3.1         18           2
 G glycine             5.2         30           2
 H histidine           2.9         17           2
 I isoleucine          4.1         24           1
 K lysine              5.2         30           2
 L leucine             8.8         51           2
 M methionine          2.9         17           2
 N asparagine          4.8         28           2
 P proline             5.5         32           2
 Q glutamine           5.7         33           2
 R arginine            5.5         32           3
 S serine              8.4         49           4
 T threonine           6.0         35           2
 V valine              7.2         42           2
 W tryptophan          1.0          6           1
 Y tyrosine            3.8         22           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein tyrosine phosphatase, non-receptor type 3 i... 
PTPN3                 1.000   protein tyrosine phosphatase, non-receptor type 3 i...
PTPN3                 1.000   protein tyrosine phosphatase, non-receptor type 3 i...
PTPN3                 0.981   protein tyrosine phosphatase, non-receptor type 3 i...
PTPN3                 0.981   protein tyrosine phosphatase, non-receptor type 3 i...
PTPN3                 0.981   protein tyrosine phosphatase, non-receptor type 3 i...
PTPN4                 0.485   protein tyrosine phosphatase, non-receptor type 4 [Ho...
PTPN14                0.163   protein tyrosine phosphatase, non-receptor type 14 [...
PTPN21                0.145   protein tyrosine phosphatase, non-receptor type 21 ...
PTPN2                 0.143   protein tyrosine phosphatase, non-receptor type 2 iso...
PTPN2                 0.143   protein tyrosine phosphatase, non-receptor type 2 [H...
PTPN2                 0.143   protein tyrosine phosphatase, non-receptor type 2 is...
PTPN13                0.142   protein tyrosine phosphatase, non-receptor type 13 i...
PTPN13                0.142   protein tyrosine phosphatase, non-receptor type 13 i...
PTPN13                0.142   protein tyrosine phosphatase, non-receptor type 13 i...
PTPN13                0.142   protein tyrosine phosphatase, non-receptor type 13 is...
PTPN20A               0.138   protein tyrosine phosphatase, non-receptor type 20A...
PTPN20A               0.138   protein tyrosine phosphatase, non-receptor type 20A...
PTPN20A               0.138   protein tyrosine phosphatase, non-receptor type 20A...
PTPN20B               0.138   protein tyrosine phosphatase, non-receptor type 20 ...
PTPN20B               0.138   protein tyrosine phosphatase, non-receptor type 20 ...
PTPN20B               0.138   protein tyrosine phosphatase, non-receptor type 20 ...
PTPRJ                 0.135   protein tyrosine phosphatase, receptor type, J isof...
PTPN1                 0.133   protein tyrosine phosphatase, non-receptor type 1 [Ho...
PTPRH                 0.132   protein tyrosine phosphatase, receptor type, H isof...
PTPRH                 0.132   protein tyrosine phosphatase, receptor type, H isof...
PTPRB                 0.131   protein tyrosine phosphatase, receptor type, B isof...
PTPRB                 0.131   protein tyrosine phosphatase, receptor type, B isof...
PTPRS                 0.127   protein tyrosine phosphatase, receptor type, sigma ...
PTPRS                 0.127   protein tyrosine phosphatase, receptor type, sigma ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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