Search of human proteins with 223941776

Search of human proteins with 223941776

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|223941776 COBW domain containing 1 isoform 2 [Homo sapiens]
         (359 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|223941776 COBW domain containing 1 isoform 2 [Homo sapiens]        711   0.0  
gi|126722884 COBW domain containing 1 isoform 1 [Homo sapiens]        682   0.0  
gi|33469141 COBW domain-containing protein 2 [Homo sapiens]           674   0.0  
gi|148727351 COBW domain containing 3 [Homo sapiens]                  668   0.0  
gi|146231952 COBW domain containing 6 [Homo sapiens]                  663   0.0  
gi|223941779 COBW domain containing 1 isoform 3 [Homo sapiens]        635   0.0  
gi|119120938 COBW domain containing 5 [Homo sapiens]                  553   e-157
gi|169177343 PREDICTED: COBW domain containing 7 [Homo sapiens]       486   e-137
gi|169184311 PREDICTED: similar to COBW domain containing 1 [Hom...   356   2e-98
gi|239753286 PREDICTED: COBW domain containing 2 [Homo sapiens]       157   2e-38
gi|239752504 PREDICTED: hypothetical protein [Homo sapiens]            56   4e-08
gi|217272894 elongation factor Tu GTP binding domain containing ...    32   0.88 
gi|217272892 elongation factor Tu GTP binding domain containing ...    32   0.88 
gi|169163827 PREDICTED: similar to UPF0634 protein KIAA1641 [Hom...    31   1.5  
gi|239741684 PREDICTED: ankyrin repeat domain 36 [Homo sapiens]        31   1.5  
gi|124517695 ankyrin repeat domain 36B [Homo sapiens]                  31   1.5  
gi|11559925 X-prolyl aminopeptidase (aminopeptidase P) 3, putati...    30   2.6  
gi|50658069 phosphodiesterase 4D interacting protein isoform 2 [...    29   5.7  
gi|50658071 phosphodiesterase 4D interacting protein isoform 5 [...    29   5.7  
gi|157311604 phosphodiesterase 4D interacting protein isoform 1 ...    29   5.7  
gi|126032338 ryanodine receptor 3 [Homo sapiens]                       29   5.7  
gi|239757710 PREDICTED: hypothetical protein [Homo sapiens]            29   7.5  
gi|239752195 PREDICTED: hypothetical protein XP_002348131 [Homo ...    29   7.5  
gi|239746718 PREDICTED: hypothetical protein XP_002343801 [Homo ...    29   7.5  
gi|23097308 spectrin repeat containing, nuclear envelope 1 isofo...    29   7.5  
gi|154277116 spectrin repeat containing, nuclear envelope 1 isof...    29   7.5  
gi|170295797 carbamoyl-phosphate synthetase 1 isoform c [Homo sa...    28   9.7  
gi|169790915 carbamoyl-phosphate synthetase 1 isoform a precurso...    28   9.7  
gi|21361331 carbamoyl-phosphate synthetase 1 isoform b precursor...    28   9.7  

>gi|223941776 COBW domain containing 1 isoform 2 [Homo sapiens]
          Length = 359

 Score =  711 bits (1836), Expect = 0.0
 Identities = 359/359 (100%), Positives = 359/359 (100%)

Query: 1   MYFKRAARAFPVLLTGAGKTTLLNYILTEQHSKRVAVILNEFGEGSALEKSLAVSQGGEL 60
           MYFKRAARAFPVLLTGAGKTTLLNYILTEQHSKRVAVILNEFGEGSALEKSLAVSQGGEL
Sbjct: 1   MYFKRAARAFPVLLTGAGKTTLLNYILTEQHSKRVAVILNEFGEGSALEKSLAVSQGGEL 60

Query: 61  YEEWLELRNGCLCCSVKDSGLRAIENLMQKKGKFDYILLETTGLADPGAVASMFWVDAEL 120
           YEEWLELRNGCLCCSVKDSGLRAIENLMQKKGKFDYILLETTGLADPGAVASMFWVDAEL
Sbjct: 61  YEEWLELRNGCLCCSVKDSGLRAIENLMQKKGKFDYILLETTGLADPGAVASMFWVDAEL 120

Query: 121 GSDIYLDGIITIVDSKYGLKHLTEEKPDGLINEATRQVALADAILINKTDLVPEEDVKKL 180
           GSDIYLDGIITIVDSKYGLKHLTEEKPDGLINEATRQVALADAILINKTDLVPEEDVKKL
Sbjct: 121 GSDIYLDGIITIVDSKYGLKHLTEEKPDGLINEATRQVALADAILINKTDLVPEEDVKKL 180

Query: 181 RTTIRSINGLGQILETQRSRVDLSNVLDLHAFDSLSGISLQKKLQHVPGTQPHLDQSIVT 240
           RTTIRSINGLGQILETQRSRVDLSNVLDLHAFDSLSGISLQKKLQHVPGTQPHLDQSIVT
Sbjct: 181 RTTIRSINGLGQILETQRSRVDLSNVLDLHAFDSLSGISLQKKLQHVPGTQPHLDQSIVT 240

Query: 241 ITFEVPGNAKEEHLNMFIQNLLWEKNVRNKDNHCMEVIRLKGLVSIKDKSQQVIVQGVHE 300
           ITFEVPGNAKEEHLNMFIQNLLWEKNVRNKDNHCMEVIRLKGLVSIKDKSQQVIVQGVHE
Sbjct: 241 ITFEVPGNAKEEHLNMFIQNLLWEKNVRNKDNHCMEVIRLKGLVSIKDKSQQVIVQGVHE 300

Query: 301 LYDLEETPVSWKDDTERTNRLVLLGRNLDKDILKQLFIATVTETEKQWTTRFQEDQVCT 359
           LYDLEETPVSWKDDTERTNRLVLLGRNLDKDILKQLFIATVTETEKQWTTRFQEDQVCT
Sbjct: 301 LYDLEETPVSWKDDTERTNRLVLLGRNLDKDILKQLFIATVTETEKQWTTRFQEDQVCT 359


>gi|126722884 COBW domain containing 1 isoform 1 [Homo sapiens]
          Length = 395

 Score =  682 bits (1761), Expect = 0.0
 Identities = 344/344 (100%), Positives = 344/344 (100%)

Query: 16  GAGKTTLLNYILTEQHSKRVAVILNEFGEGSALEKSLAVSQGGELYEEWLELRNGCLCCS 75
           GAGKTTLLNYILTEQHSKRVAVILNEFGEGSALEKSLAVSQGGELYEEWLELRNGCLCCS
Sbjct: 52  GAGKTTLLNYILTEQHSKRVAVILNEFGEGSALEKSLAVSQGGELYEEWLELRNGCLCCS 111

Query: 76  VKDSGLRAIENLMQKKGKFDYILLETTGLADPGAVASMFWVDAELGSDIYLDGIITIVDS 135
           VKDSGLRAIENLMQKKGKFDYILLETTGLADPGAVASMFWVDAELGSDIYLDGIITIVDS
Sbjct: 112 VKDSGLRAIENLMQKKGKFDYILLETTGLADPGAVASMFWVDAELGSDIYLDGIITIVDS 171

Query: 136 KYGLKHLTEEKPDGLINEATRQVALADAILINKTDLVPEEDVKKLRTTIRSINGLGQILE 195
           KYGLKHLTEEKPDGLINEATRQVALADAILINKTDLVPEEDVKKLRTTIRSINGLGQILE
Sbjct: 172 KYGLKHLTEEKPDGLINEATRQVALADAILINKTDLVPEEDVKKLRTTIRSINGLGQILE 231

Query: 196 TQRSRVDLSNVLDLHAFDSLSGISLQKKLQHVPGTQPHLDQSIVTITFEVPGNAKEEHLN 255
           TQRSRVDLSNVLDLHAFDSLSGISLQKKLQHVPGTQPHLDQSIVTITFEVPGNAKEEHLN
Sbjct: 232 TQRSRVDLSNVLDLHAFDSLSGISLQKKLQHVPGTQPHLDQSIVTITFEVPGNAKEEHLN 291

Query: 256 MFIQNLLWEKNVRNKDNHCMEVIRLKGLVSIKDKSQQVIVQGVHELYDLEETPVSWKDDT 315
           MFIQNLLWEKNVRNKDNHCMEVIRLKGLVSIKDKSQQVIVQGVHELYDLEETPVSWKDDT
Sbjct: 292 MFIQNLLWEKNVRNKDNHCMEVIRLKGLVSIKDKSQQVIVQGVHELYDLEETPVSWKDDT 351

Query: 316 ERTNRLVLLGRNLDKDILKQLFIATVTETEKQWTTRFQEDQVCT 359
           ERTNRLVLLGRNLDKDILKQLFIATVTETEKQWTTRFQEDQVCT
Sbjct: 352 ERTNRLVLLGRNLDKDILKQLFIATVTETEKQWTTRFQEDQVCT 395


>gi|33469141 COBW domain-containing protein 2 [Homo sapiens]
          Length = 395

 Score =  674 bits (1739), Expect = 0.0
 Identities = 339/344 (98%), Positives = 341/344 (99%)

Query: 16  GAGKTTLLNYILTEQHSKRVAVILNEFGEGSALEKSLAVSQGGELYEEWLELRNGCLCCS 75
           GAGKTTLLNYILTEQHSKRVAVILNEFGEGSALEKSLAVSQGGELYEEWLELRNGCLCCS
Sbjct: 52  GAGKTTLLNYILTEQHSKRVAVILNEFGEGSALEKSLAVSQGGELYEEWLELRNGCLCCS 111

Query: 76  VKDSGLRAIENLMQKKGKFDYILLETTGLADPGAVASMFWVDAELGSDIYLDGIITIVDS 135
           VKD+GLRAIENLMQKKGKFDYILLETTGLADPGAVASMFWVDAELGSDIYLDGIITIVDS
Sbjct: 112 VKDNGLRAIENLMQKKGKFDYILLETTGLADPGAVASMFWVDAELGSDIYLDGIITIVDS 171

Query: 136 KYGLKHLTEEKPDGLINEATRQVALADAILINKTDLVPEEDVKKLRTTIRSINGLGQILE 195
           KYGLKHL EEKPDGLINEATRQVALADAILINKTDLVPEEDVKKLR TIRSINGLGQILE
Sbjct: 172 KYGLKHLAEEKPDGLINEATRQVALADAILINKTDLVPEEDVKKLRATIRSINGLGQILE 231

Query: 196 TQRSRVDLSNVLDLHAFDSLSGISLQKKLQHVPGTQPHLDQSIVTITFEVPGNAKEEHLN 255
           TQRSRVDLSNVLDLHAFDSLSGISLQKKLQHVPGTQPHLDQSIVTITFEVPGNAKEEHLN
Sbjct: 232 TQRSRVDLSNVLDLHAFDSLSGISLQKKLQHVPGTQPHLDQSIVTITFEVPGNAKEEHLN 291

Query: 256 MFIQNLLWEKNVRNKDNHCMEVIRLKGLVSIKDKSQQVIVQGVHELYDLEETPVSWKDDT 315
           MFIQNLLWEKNVRNKDNHCMEVIRLKGLVSIKDKSQQVIVQGVHELYDLEETPVSWKDDT
Sbjct: 292 MFIQNLLWEKNVRNKDNHCMEVIRLKGLVSIKDKSQQVIVQGVHELYDLEETPVSWKDDT 351

Query: 316 ERTNRLVLLGRNLDKDILKQLFIATVTETEKQWTTRFQEDQVCT 359
           ERTNRLVLLGRNLDKDILKQLFIATVTETEKQWTT F+EDQVCT
Sbjct: 352 ERTNRLVLLGRNLDKDILKQLFIATVTETEKQWTTHFKEDQVCT 395


>gi|148727351 COBW domain containing 3 [Homo sapiens]
          Length = 395

 Score =  668 bits (1724), Expect = 0.0
 Identities = 337/344 (97%), Positives = 340/344 (98%)

Query: 16  GAGKTTLLNYILTEQHSKRVAVILNEFGEGSALEKSLAVSQGGELYEEWLELRNGCLCCS 75
           GAGKTTLLNYILTEQHSKRVAVILNE GEGSALEKSLAVSQGGELYEEWLELRNGCLCCS
Sbjct: 52  GAGKTTLLNYILTEQHSKRVAVILNESGEGSALEKSLAVSQGGELYEEWLELRNGCLCCS 111

Query: 76  VKDSGLRAIENLMQKKGKFDYILLETTGLADPGAVASMFWVDAELGSDIYLDGIITIVDS 135
           VKD+GLRAIENLMQKKGKFD ILLETTGLADPGAVASMFWVDAELGSDIYLDGIITIVDS
Sbjct: 112 VKDNGLRAIENLMQKKGKFDDILLETTGLADPGAVASMFWVDAELGSDIYLDGIITIVDS 171

Query: 136 KYGLKHLTEEKPDGLINEATRQVALADAILINKTDLVPEEDVKKLRTTIRSINGLGQILE 195
           KYGLKHLTEEKPDGLINEATRQVALAD ILINKTDLVPEEDVKKLRTTIRSINGLGQILE
Sbjct: 172 KYGLKHLTEEKPDGLINEATRQVALADIILINKTDLVPEEDVKKLRTTIRSINGLGQILE 231

Query: 196 TQRSRVDLSNVLDLHAFDSLSGISLQKKLQHVPGTQPHLDQSIVTITFEVPGNAKEEHLN 255
           TQRSRVDLSNVLDLHAFDSLSGISLQKKLQHVPGTQPHLDQSIVTITFEVPGNAKEEHLN
Sbjct: 232 TQRSRVDLSNVLDLHAFDSLSGISLQKKLQHVPGTQPHLDQSIVTITFEVPGNAKEEHLN 291

Query: 256 MFIQNLLWEKNVRNKDNHCMEVIRLKGLVSIKDKSQQVIVQGVHELYDLEETPVSWKDDT 315
           MFIQNLLWEKNVRNKDNHCMEVIRLKGLVSIKDKSQQVIVQGVHELYDLEETPVSWKDDT
Sbjct: 292 MFIQNLLWEKNVRNKDNHCMEVIRLKGLVSIKDKSQQVIVQGVHELYDLEETPVSWKDDT 351

Query: 316 ERTNRLVLLGRNLDKDILKQLFIATVTETEKQWTTRFQEDQVCT 359
           ERTNRLVL+GRNLDKDILKQLFIATVTETEKQWTT F+EDQVCT
Sbjct: 352 ERTNRLVLIGRNLDKDILKQLFIATVTETEKQWTTHFKEDQVCT 395


>gi|146231952 COBW domain containing 6 [Homo sapiens]
          Length = 395

 Score =  663 bits (1710), Expect = 0.0
 Identities = 334/344 (97%), Positives = 339/344 (98%)

Query: 16  GAGKTTLLNYILTEQHSKRVAVILNEFGEGSALEKSLAVSQGGELYEEWLELRNGCLCCS 75
           GAGKTTLLNYILTEQHSKRVAVILNE GEGSALEKSLAVSQGGELYEEWLELRNGCLCCS
Sbjct: 52  GAGKTTLLNYILTEQHSKRVAVILNESGEGSALEKSLAVSQGGELYEEWLELRNGCLCCS 111

Query: 76  VKDSGLRAIENLMQKKGKFDYILLETTGLADPGAVASMFWVDAELGSDIYLDGIITIVDS 135
           VKD+GLRAIENLMQKKGKFD ILLETTGLADPGAVASMFWVDAELGSDIYLDGIITIVDS
Sbjct: 112 VKDNGLRAIENLMQKKGKFDDILLETTGLADPGAVASMFWVDAELGSDIYLDGIITIVDS 171

Query: 136 KYGLKHLTEEKPDGLINEATRQVALADAILINKTDLVPEEDVKKLRTTIRSINGLGQILE 195
           KYGLKHLTEEKPDGLINEATRQVALAD ILINKTDLVPEEDVKKLRTT+RSINGLGQILE
Sbjct: 172 KYGLKHLTEEKPDGLINEATRQVALADIILINKTDLVPEEDVKKLRTTLRSINGLGQILE 231

Query: 196 TQRSRVDLSNVLDLHAFDSLSGISLQKKLQHVPGTQPHLDQSIVTITFEVPGNAKEEHLN 255
           TQRSRVDLSNVLDLHAFDSLSGISLQKKLQHVPGTQPHLDQSIVTITF+VPGNAKEEHLN
Sbjct: 232 TQRSRVDLSNVLDLHAFDSLSGISLQKKLQHVPGTQPHLDQSIVTITFDVPGNAKEEHLN 291

Query: 256 MFIQNLLWEKNVRNKDNHCMEVIRLKGLVSIKDKSQQVIVQGVHELYDLEETPVSWKDDT 315
           MFIQNLLWEKNVRNKDNHCMEVIRLKGLVSIKDKSQQVIVQGVHEL DLEETPVSWKDDT
Sbjct: 292 MFIQNLLWEKNVRNKDNHCMEVIRLKGLVSIKDKSQQVIVQGVHELCDLEETPVSWKDDT 351

Query: 316 ERTNRLVLLGRNLDKDILKQLFIATVTETEKQWTTRFQEDQVCT 359
           ERTNRLVL+GRNLDKDILKQLFIATVTETEKQWTT F+EDQVCT
Sbjct: 352 ERTNRLVLIGRNLDKDILKQLFIATVTETEKQWTTHFKEDQVCT 395


>gi|223941779 COBW domain containing 1 isoform 3 [Homo sapiens]
          Length = 376

 Score =  635 bits (1638), Expect = 0.0
 Identities = 325/344 (94%), Positives = 325/344 (94%), Gaps = 19/344 (5%)

Query: 16  GAGKTTLLNYILTEQHSKRVAVILNEFGEGSALEKSLAVSQGGELYEEWLELRNGCLCCS 75
           GAGKTTLLNYILTEQHSKRVAVILNEFGEGSALEKSLAVSQGGELYEEWLELRNGCLCCS
Sbjct: 52  GAGKTTLLNYILTEQHSKRVAVILNEFGEGSALEKSLAVSQGGELYEEWLELRNGCLCCS 111

Query: 76  VKDSGLRAIENLMQKKGKFDYILLETTGLADPGAVASMFWVDAELGSDIYLDGIITIVDS 135
           VKDSGLRAIENLMQKKGKFDYILLETTGLADPGAVASMFWVDAELGSDIYLDGIITIVDS
Sbjct: 112 VKDSGLRAIENLMQKKGKFDYILLETTGLADPGAVASMFWVDAELGSDIYLDGIITIVDS 171

Query: 136 KYGLKHLTEEKPDGLINEATRQVALADAILINKTDLVPEEDVKKLRTTIRSINGLGQILE 195
           KYGLKHLTEEKPDGLINEATRQVALADAILINKTDLVPEEDVKKLRTTIRSINGLGQILE
Sbjct: 172 KYGLKHLTEEKPDGLINEATRQVALADAILINKTDLVPEEDVKKLRTTIRSINGLGQILE 231

Query: 196 TQRSRVDLSNVLDLHAFDSLSGISLQKKLQHVPGTQPHLDQSIVTITFEVPGNAKEEHLN 255
           TQRS                   SLQKKLQHVPGTQPHLDQSIVTITFEVPGNAKEEHLN
Sbjct: 232 TQRS-------------------SLQKKLQHVPGTQPHLDQSIVTITFEVPGNAKEEHLN 272

Query: 256 MFIQNLLWEKNVRNKDNHCMEVIRLKGLVSIKDKSQQVIVQGVHELYDLEETPVSWKDDT 315
           MFIQNLLWEKNVRNKDNHCMEVIRLKGLVSIKDKSQQVIVQGVHELYDLEETPVSWKDDT
Sbjct: 273 MFIQNLLWEKNVRNKDNHCMEVIRLKGLVSIKDKSQQVIVQGVHELYDLEETPVSWKDDT 332

Query: 316 ERTNRLVLLGRNLDKDILKQLFIATVTETEKQWTTRFQEDQVCT 359
           ERTNRLVLLGRNLDKDILKQLFIATVTETEKQWTTRFQEDQVCT
Sbjct: 333 ERTNRLVLLGRNLDKDILKQLFIATVTETEKQWTTRFQEDQVCT 376


>gi|119120938 COBW domain containing 5 [Homo sapiens]
          Length = 347

 Score =  553 bits (1424), Expect = e-157
 Identities = 289/344 (84%), Positives = 292/344 (84%), Gaps = 48/344 (13%)

Query: 16  GAGKTTLLNYILTEQHSKRVAVILNEFGEGSALEKSLAVSQGGELYEEWLELRNGCLCCS 75
           GAGKTTLLNYILTEQHSKRVAVILNE GEGSALEKSLAVSQGGELYEEWLELRNGCLCCS
Sbjct: 52  GAGKTTLLNYILTEQHSKRVAVILNESGEGSALEKSLAVSQGGELYEEWLELRNGCLCCS 111

Query: 76  VKDSGLRAIENLMQKKGKFDYILLETTGLADPGAVASMFWVDAELGSDIYLDGIITIVDS 135
           VKD+GLRAIENLMQKKGKFD ILLETTGLADPGAV SMFWVDAELGSDIYLDGIITIVDS
Sbjct: 112 VKDNGLRAIENLMQKKGKFDDILLETTGLADPGAVTSMFWVDAELGSDIYLDGIITIVDS 171

Query: 136 KYGLKHLTEEKPDGLINEATRQVALADAILINKTDLVPEEDVKKLRTTIRSINGLGQILE 195
           KYGLKHLTEEKPDGLINEATR                             SINGLGQILE
Sbjct: 172 KYGLKHLTEEKPDGLINEATR-----------------------------SINGLGQILE 202

Query: 196 TQRSRVDLSNVLDLHAFDSLSGISLQKKLQHVPGTQPHLDQSIVTITFEVPGNAKEEHLN 255
           TQRS                   SLQKKLQHVPGTQPHLDQSIVTITFEVPGNAKEEHLN
Sbjct: 203 TQRS-------------------SLQKKLQHVPGTQPHLDQSIVTITFEVPGNAKEEHLN 243

Query: 256 MFIQNLLWEKNVRNKDNHCMEVIRLKGLVSIKDKSQQVIVQGVHELYDLEETPVSWKDDT 315
           MFIQNLLWEKNVRNKDNHCMEVIRLKGLVSIKDKSQQVIVQGVHELYDLEETPVSWKDDT
Sbjct: 244 MFIQNLLWEKNVRNKDNHCMEVIRLKGLVSIKDKSQQVIVQGVHELYDLEETPVSWKDDT 303

Query: 316 ERTNRLVLLGRNLDKDILKQLFIATVTETEKQWTTRFQEDQVCT 359
           ERTNRLVL+GRNLDKDILKQLFIATVTETEKQWTT F+EDQVCT
Sbjct: 304 ERTNRLVLIGRNLDKDILKQLFIATVTETEKQWTTHFKEDQVCT 347


>gi|169177343 PREDICTED: COBW domain containing 7 [Homo sapiens]
          Length = 247

 Score =  486 bits (1250), Expect = e-137
 Identities = 243/247 (98%), Positives = 245/247 (99%)

Query: 113 MFWVDAELGSDIYLDGIITIVDSKYGLKHLTEEKPDGLINEATRQVALADAILINKTDLV 172
           MFWVDAELGSDIYLDGIITIVDSKYGLKHLTEEKPDGLINEATRQVALAD ILINKTDLV
Sbjct: 1   MFWVDAELGSDIYLDGIITIVDSKYGLKHLTEEKPDGLINEATRQVALADIILINKTDLV 60

Query: 173 PEEDVKKLRTTIRSINGLGQILETQRSRVDLSNVLDLHAFDSLSGISLQKKLQHVPGTQP 232
           PEEDVKKLRTTIRSINGLGQILETQRSRVDLSNVLDLHAFDSLSGISLQKKLQHVPGTQP
Sbjct: 61  PEEDVKKLRTTIRSINGLGQILETQRSRVDLSNVLDLHAFDSLSGISLQKKLQHVPGTQP 120

Query: 233 HLDQSIVTITFEVPGNAKEEHLNMFIQNLLWEKNVRNKDNHCMEVIRLKGLVSIKDKSQQ 292
           HLDQSIVTITFEVPGNAKEEHLNMFIQNLLWEKNVRNKDNHCMEVIRLKGLVSIKDKSQQ
Sbjct: 121 HLDQSIVTITFEVPGNAKEEHLNMFIQNLLWEKNVRNKDNHCMEVIRLKGLVSIKDKSQQ 180

Query: 293 VIVQGVHELYDLEETPVSWKDDTERTNRLVLLGRNLDKDILKQLFIATVTETEKQWTTRF 352
           VIVQGVHELYDLEETPVSWKDDTERTNRLVL+GRNLDKDILKQLFIATVTETEKQWTT F
Sbjct: 181 VIVQGVHELYDLEETPVSWKDDTERTNRLVLIGRNLDKDILKQLFIATVTETEKQWTTHF 240

Query: 353 QEDQVCT 359
           +EDQVCT
Sbjct: 241 KEDQVCT 247


>gi|169184311 PREDICTED: similar to COBW domain containing 1 [Homo
           sapiens]
          Length = 181

 Score =  356 bits (914), Expect = 2e-98
 Identities = 178/181 (98%), Positives = 180/181 (99%)

Query: 139 LKHLTEEKPDGLINEATRQVALADAILINKTDLVPEEDVKKLRTTIRSINGLGQILETQR 198
           ++HLTEEKPDGLINEATRQVALAD ILINKTDLVPEEDVKKLRTTIRSINGLGQILETQR
Sbjct: 1   MRHLTEEKPDGLINEATRQVALADIILINKTDLVPEEDVKKLRTTIRSINGLGQILETQR 60

Query: 199 SRVDLSNVLDLHAFDSLSGISLQKKLQHVPGTQPHLDQSIVTITFEVPGNAKEEHLNMFI 258
           SRVDLSNVLDLHAFDSLSGISLQKKLQHVPGTQPHLDQSIVTITFEVPGNAKEEHLNMFI
Sbjct: 61  SRVDLSNVLDLHAFDSLSGISLQKKLQHVPGTQPHLDQSIVTITFEVPGNAKEEHLNMFI 120

Query: 259 QNLLWEKNVRNKDNHCMEVIRLKGLVSIKDKSQQVIVQGVHELYDLEETPVSWKDDTERT 318
           QNLLWEKNVRNKDNHCMEVIRLKGLVSIKDKSQQVIVQGVHELYDLEETPVSWKDDTERT
Sbjct: 121 QNLLWEKNVRNKDNHCMEVIRLKGLVSIKDKSQQVIVQGVHELYDLEETPVSWKDDTERT 180

Query: 319 N 319
           N
Sbjct: 181 N 181


>gi|239753286 PREDICTED: COBW domain containing 2 [Homo sapiens]
          Length = 77

 Score =  157 bits (396), Expect = 2e-38
 Identities = 77/77 (100%), Positives = 77/77 (100%)

Query: 1  MYFKRAARAFPVLLTGAGKTTLLNYILTEQHSKRVAVILNEFGEGSALEKSLAVSQGGEL 60
          MYFKRAARAFPVLLTGAGKTTLLNYILTEQHSKRVAVILNEFGEGSALEKSLAVSQGGEL
Sbjct: 1  MYFKRAARAFPVLLTGAGKTTLLNYILTEQHSKRVAVILNEFGEGSALEKSLAVSQGGEL 60

Query: 61 YEEWLELRNGCLCCSVK 77
          YEEWLELRNGCLCCSVK
Sbjct: 61 YEEWLELRNGCLCCSVK 77


>gi|239752504 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 51

 Score = 56.2 bits (134), Expect = 4e-08
 Identities = 25/31 (80%), Positives = 27/31 (87%)

Query: 258 IQNLLWEKNVRNKDNHCMEVIRLKGLVSIKD 288
           IQNLLWEKNVRNKDNHCMEVIRLK   ++ D
Sbjct: 11  IQNLLWEKNVRNKDNHCMEVIRLKVQFTVAD 41


>gi|217272894 elongation factor Tu GTP binding domain containing 2
           isoform b [Homo sapiens]
          Length = 937

 Score = 32.0 bits (71), Expect = 0.88
 Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 13/95 (13%)

Query: 127 DGIITIVDSKYGLKHLTEEKPDGLINEATRQVALADAILINKTD-------LVPEEDVKK 179
           DG++  +D+  G+   TE     LI  A ++  LA  + INK D       L P +   K
Sbjct: 188 DGVVLFIDAAEGVMLNTER----LIKHAVQE-RLAVTVCINKIDRLILELKLPPTDAYYK 242

Query: 180 LRTTIRSINGLGQILETQRSRVDLSNVLDLHAFDS 214
           LR  +  +NGL  +  T  + + LS +L    F S
Sbjct: 243 LRHIVDEVNGLISMYSTDENLI-LSPLLGNVCFSS 276


>gi|217272892 elongation factor Tu GTP binding domain containing 2
           isoform a [Homo sapiens]
          Length = 972

 Score = 32.0 bits (71), Expect = 0.88
 Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 13/95 (13%)

Query: 127 DGIITIVDSKYGLKHLTEEKPDGLINEATRQVALADAILINKTD-------LVPEEDVKK 179
           DG++  +D+  G+   TE     LI  A ++  LA  + INK D       L P +   K
Sbjct: 223 DGVVLFIDAAEGVMLNTER----LIKHAVQE-RLAVTVCINKIDRLILELKLPPTDAYYK 277

Query: 180 LRTTIRSINGLGQILETQRSRVDLSNVLDLHAFDS 214
           LR  +  +NGL  +  T  + + LS +L    F S
Sbjct: 278 LRHIVDEVNGLISMYSTDENLI-LSPLLGNVCFSS 311


>gi|169163827 PREDICTED: similar to UPF0634 protein KIAA1641 [Homo
           sapiens]
          Length = 475

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 16/53 (30%), Positives = 31/53 (58%), Gaps = 8/53 (15%)

Query: 262 LWEKNVRNKDNHC----MEVIRLKGLVSIKDK----SQQVIVQGVHELYDLEE 306
           LW++ ++ KDNHC    +++ +LK   S+  K     +++  Q  HE+ +LE+
Sbjct: 37  LWKRLIKLKDNHCEQLRVKIRKLKNKASVLQKRISEKEEIKSQLKHEILELEK 89


>gi|239741684 PREDICTED: ankyrin repeat domain 36 [Homo sapiens]
          Length = 1524

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 16/53 (30%), Positives = 31/53 (58%), Gaps = 8/53 (15%)

Query: 262  LWEKNVRNKDNHC----MEVIRLKGLVSIKDK----SQQVIVQGVHELYDLEE 306
            LW++ ++ KDNHC    +++ +LK   S+  K     +++  Q  HE+ +LE+
Sbjct: 987  LWKRLIKLKDNHCEQLRVKIRKLKNKASVLQKRISEKEEIKSQLKHEILELEK 1039


>gi|124517695 ankyrin repeat domain 36B [Homo sapiens]
          Length = 1121

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 16/53 (30%), Positives = 31/53 (58%), Gaps = 8/53 (15%)

Query: 262 LWEKNVRNKDNHC----MEVIRLKGLVSIKDK----SQQVIVQGVHELYDLEE 306
           LW++ ++ KDNHC    +++ +LK   S+  K     +++  Q  HE+ +LE+
Sbjct: 584 LWKRLIKLKDNHCEQLRVKIRKLKNKASVLQKRISEKEEIKSQLKHEILELEK 636


>gi|11559925 X-prolyl aminopeptidase (aminopeptidase P) 3, putative
           [Homo sapiens]
          Length = 507

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 10/90 (11%)

Query: 9   AFPVLLTGAGKTTLLNYILTEQHSKRVAVILNEFG-EGSALEKSLA---------VSQGG 58
           A+P ++ G  ++  L+Y+   Q  K   ++L + G E S     +           +   
Sbjct: 299 AYPPVVAGGNRSNTLHYVKNNQLIKDGEMVLLDGGCESSCYVSDITRTWPVNGRFTAPQA 358

Query: 59  ELYEEWLELRNGCLCCSVKDSGLRAIENLM 88
           ELYE  LE++  CL      + L  I ++M
Sbjct: 359 ELYEAVLEIQRDCLALCFPGTSLENIYSMM 388


>gi|50658069 phosphodiesterase 4D interacting protein isoform 2
           [Homo sapiens]
          Length = 969

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 42/214 (19%), Positives = 86/214 (40%), Gaps = 11/214 (5%)

Query: 125 YLDGIITIVDSKYGLKHLTEEKPDGLINEATRQVALADAILINKTDLVPEEDVKKLRTTI 184
           YL G  +++          E  P G + + T Q ++      + T L  +EDV   R+T+
Sbjct: 683 YLGGRDSLMSQAPISNQQAEVTPTGCLGKQTDQGSMQIPSRDDSTSLTAKEDVSIPRSTL 742

Query: 185 RSIN---GLGQILETQRSRVDLSNVLDLHAFDSLSGISLQKKLQHVPGTQPHLDQSIVTI 241
             ++   GL + L   +  ++L    +  +   LS +     +Q         D   +T 
Sbjct: 743 GDLDTVAGLEKELSNAKEELELMAKKERESQMELSALQSMMAVQEEELQVQAADMESLTR 802

Query: 242 TFEVPGNAKEEHLNMFIQNLLWEKNVRNKDNHCMEVIRLKGLV-SIKDKSQQVIVQGVHE 300
             ++    KE+ +      L+  +++   +    EV+ L+  V S++ + Q++      +
Sbjct: 803 NIQI----KEDLIKDLQMQLVDPEDIPAMERLTQEVLLLREKVASVESQGQEISGNRRQQ 858

Query: 301 LYDLEETPVSWKDDTERTNRLVLLGRNLDKDILK 334
           L  + E  V   D+  R N  +   R L   ++K
Sbjct: 859 LLLMLEGLV---DERSRLNEALQAERQLYSSLVK 889


>gi|50658071 phosphodiesterase 4D interacting protein isoform 5 [Homo
            sapiens]
          Length = 1132

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 42/214 (19%), Positives = 86/214 (40%), Gaps = 11/214 (5%)

Query: 125  YLDGIITIVDSKYGLKHLTEEKPDGLINEATRQVALADAILINKTDLVPEEDVKKLRTTI 184
            YL G  +++          E  P G + + T Q ++      + T L  +EDV   R+T+
Sbjct: 846  YLGGRDSLMSQAPISNQQAEVTPTGCLGKQTDQGSMQIPSRDDSTSLTAKEDVSIPRSTL 905

Query: 185  RSIN---GLGQILETQRSRVDLSNVLDLHAFDSLSGISLQKKLQHVPGTQPHLDQSIVTI 241
              ++   GL + L   +  ++L    +  +   LS +     +Q         D   +T 
Sbjct: 906  GDLDTVAGLEKELSNAKEELELMAKKERESQMELSALQSMMAVQEEELQVQAADMESLTR 965

Query: 242  TFEVPGNAKEEHLNMFIQNLLWEKNVRNKDNHCMEVIRLKGLV-SIKDKSQQVIVQGVHE 300
              ++    KE+ +      L+  +++   +    EV+ L+  V S++ + Q++      +
Sbjct: 966  NIQI----KEDLIKDLQMQLVDPEDIPAMERLTQEVLLLREKVASVESQGQEISGNRRQQ 1021

Query: 301  LYDLEETPVSWKDDTERTNRLVLLGRNLDKDILK 334
            L  + E  V   D+  R N  +   R L   ++K
Sbjct: 1022 LLLMLEGLV---DERSRLNEALQAERQLYSSLVK 1052


>gi|157311604 phosphodiesterase 4D interacting protein isoform 1
           [Homo sapiens]
          Length = 2346

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 42/214 (19%), Positives = 86/214 (40%), Gaps = 11/214 (5%)

Query: 125 YLDGIITIVDSKYGLKHLTEEKPDGLINEATRQVALADAILINKTDLVPEEDVKKLRTTI 184
           YL G  +++          E  P G + + T Q ++      + T L  +EDV   R+T+
Sbjct: 683 YLGGRDSLMSQAPISNQQAEVTPTGCLGKQTDQGSMQIPSRDDSTSLTAKEDVSIPRSTL 742

Query: 185 RSIN---GLGQILETQRSRVDLSNVLDLHAFDSLSGISLQKKLQHVPGTQPHLDQSIVTI 241
             ++   GL + L   +  ++L    +  +   LS +     +Q         D   +T 
Sbjct: 743 GDLDTVAGLEKELSNAKEELELMAKKERESQMELSALQSMMAVQEEELQVQAADMESLTR 802

Query: 242 TFEVPGNAKEEHLNMFIQNLLWEKNVRNKDNHCMEVIRLKGLV-SIKDKSQQVIVQGVHE 300
             ++    KE+ +      L+  +++   +    EV+ L+  V S++ + Q++      +
Sbjct: 803 NIQI----KEDLIKDLQMQLVDPEDIPAMERLTQEVLLLREKVASVESQGQEISGNRRQQ 858

Query: 301 LYDLEETPVSWKDDTERTNRLVLLGRNLDKDILK 334
           L  + E  V   D+  R N  +   R L   ++K
Sbjct: 859 LLLMLEGLV---DERSRLNEALQAERQLYSSLVK 889


>gi|126032338 ryanodine receptor 3 [Homo sapiens]
          Length = 4870

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 16/54 (29%), Positives = 26/54 (48%)

Query: 134  DSKYGLKHLTEEKPDGLINEATRQVALADAILINKTDLVPEEDVKKLRTTIRSI 187
            DS Y L+   EE+ DG +  A+       ++  N TD +    +K LR   R++
Sbjct: 4119 DSSYVLEIAGEEEEDGSLEPASAFAMACASVKRNVTDFLKRATLKNLRKQYRNV 4172


>gi|239757710 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 99

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 19/45 (42%), Positives = 24/45 (53%)

Query: 43 GEGSALEKSLAVSQGGELYEEWLELRNGCLCCSVKDSGLRAIENL 87
          G G ALE  L V  G  L E+   L +G L  S K  G+ A++NL
Sbjct: 23 GRGLALEAQLLVVGGHVLPEQLQGLVHGPLGISTKVPGMLALQNL 67


>gi|239752195 PREDICTED: hypothetical protein XP_002348131 [Homo
          sapiens]
          Length = 99

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 19/45 (42%), Positives = 24/45 (53%)

Query: 43 GEGSALEKSLAVSQGGELYEEWLELRNGCLCCSVKDSGLRAIENL 87
          G G ALE  L V  G  L E+   L +G L  S K  G+ A++NL
Sbjct: 23 GRGLALEAQLLVVGGHVLPEQLQGLVHGPLGISTKVPGMLALQNL 67


>gi|239746718 PREDICTED: hypothetical protein XP_002343801 [Homo
          sapiens]
          Length = 99

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 19/45 (42%), Positives = 24/45 (53%)

Query: 43 GEGSALEKSLAVSQGGELYEEWLELRNGCLCCSVKDSGLRAIENL 87
          G G ALE  L V  G  L E+   L +G L  S K  G+ A++NL
Sbjct: 23 GRGLALEAQLLVVGGHVLPEQLQGLVHGPLGISTKVPGMLALQNL 67


>gi|23097308 spectrin repeat containing, nuclear envelope 1 isoform 2
            [Homo sapiens]
          Length = 8749

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 3/82 (3%)

Query: 251  EEHLNMFIQNLLWEKNVRNKDNHCMEVIRLKGLVSIKDKSQQVIVQGVHELYDLEETPVS 310
            E  LNM I     E+ +R+ +     VI+ + L ++K+    ++   VH    LE     
Sbjct: 2685 EVKLNMAIGK--GEQALRSSNKEGQRVIQTQ-LETLKEVWADIMSSSVHAQSTLESVISQ 2741

Query: 311  WKDDTERTNRLVLLGRNLDKDI 332
            W D  ER N+L     ++D+ I
Sbjct: 2742 WNDYVERKNQLEQWMESVDQKI 2763


>gi|154277116 spectrin repeat containing, nuclear envelope 1 isoform 1
            [Homo sapiens]
          Length = 8797

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 3/82 (3%)

Query: 251  EEHLNMFIQNLLWEKNVRNKDNHCMEVIRLKGLVSIKDKSQQVIVQGVHELYDLEETPVS 310
            E  LNM I     E+ +R+ +     VI+ + L ++K+    ++   VH    LE     
Sbjct: 2678 EVKLNMAIGK--GEQALRSSNKEGQRVIQTQ-LETLKEVWADIMSSSVHAQSTLESVISQ 2734

Query: 311  WKDDTERTNRLVLLGRNLDKDI 332
            W D  ER N+L     ++D+ I
Sbjct: 2735 WNDYVERKNQLEQWMESVDQKI 2756


>gi|170295797 carbamoyl-phosphate synthetase 1 isoform c [Homo
           sapiens]
          Length = 1049

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 17/43 (39%), Positives = 24/43 (55%)

Query: 145 EKPDGLINEATRQVALADAILINKTDLVPEEDVKKLRTTIRSI 187
           E+PDGLI     Q AL   + + K  ++ E  VK L T++ SI
Sbjct: 48  EQPDGLILGMGGQTALNCGVELFKRGVLKEYGVKVLGTSVESI 90


>gi|169790915 carbamoyl-phosphate synthetase 1 isoform a precursor
           [Homo sapiens]
          Length = 1506

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 17/43 (39%), Positives = 24/43 (55%)

Query: 145 EKPDGLINEATRQVALADAILINKTDLVPEEDVKKLRTTIRSI 187
           E+PDGLI     Q AL   + + K  ++ E  VK L T++ SI
Sbjct: 505 EQPDGLILGMGGQTALNCGVELFKRGVLKEYGVKVLGTSVESI 547


>gi|21361331 carbamoyl-phosphate synthetase 1 isoform b precursor
           [Homo sapiens]
          Length = 1500

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 17/43 (39%), Positives = 24/43 (55%)

Query: 145 EKPDGLINEATRQVALADAILINKTDLVPEEDVKKLRTTIRSI 187
           E+PDGLI     Q AL   + + K  ++ E  VK L T++ SI
Sbjct: 499 EQPDGLILGMGGQTALNCGVELFKRGVLKEYGVKVLGTSVESI 541


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.135    0.386 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,754,269
Number of Sequences: 37866
Number of extensions: 531145
Number of successful extensions: 1214
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 1186
Number of HSP's gapped (non-prelim): 35
length of query: 359
length of database: 18,247,518
effective HSP length: 103
effective length of query: 256
effective length of database: 14,347,320
effective search space: 3672913920
effective search space used: 3672913920
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.