Guide to the Human Genome
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Name: XPNPEP3 Sequence: fasta or formatted (507aa) NCBI GI: 11559925
Description:

X-prolyl aminopeptidase (aminopeptidase P) 3, putative

Referenced in:

Metalloproteases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         33           2
 C cysteine            2.2         11           1
 D aspartate           5.3         27           2
 E glutamate           6.1         31           2
 F phenylalanine       3.0         15           1
 G glycine             6.1         31           2
 H histidine           2.6         13           2
 I isoleucine          5.3         27           1
 K lysine              5.1         26           1
 L leucine            10.5         53           2
 M methionine          3.6         18           2
 N asparagine          3.6         18           2
 P proline             7.7         39           2
 Q glutamine           5.5         28           2
 R arginine            5.5         28           2
 S serine              6.3         32           2
 T threonine           4.5         23           1
 V valine              5.9         30           3
 W tryptophan          1.0          5           1
 Y tyrosine            3.7         19           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   X-prolyl aminopeptidase (aminopeptidase P) 3, putati... 
PEPD                  0.135   peptidase D 
MAP1D                 0.022   methionine aminopeptidase 1D 
XPNPEP1               0.021   X-prolyl aminopeptidase (aminopeptidase P) 1, solubl...
XPNPEP2               0.018   X-prolyl aminopeptidase 2, membrane-bound 
METAP1                0.008   methionyl aminopeptidase 1 
KANK3                 0.007   ankyrin repeat domain 47 
CBWD1                 0.005   COBW domain containing 1 isoform 2 
TTC26                 0.005   tetratricopeptide repeat domain 26 isoform 1 
TTC26                 0.005   tetratricopeptide repeat domain 26 isoform 3 
RABEP1                0.005   rabaptin, RAB GTPase binding effector protein 1 iso...
ZNF193                0.005   zinc finger protein 193 
RABEP1                0.005   rabaptin, RAB GTPase binding effector protein 1 isof...
AR                    0.005   androgen receptor isoform 2 
AR                    0.005   androgen receptor isoform 1 
MICAL3                0.004   microtubule associated monoxygenase, calponin and L...
MICAL3                0.004   microtubule associated monoxygenase, calponin and L...
MICAL3                0.004   microtubule associated monoxygenase, calponin and L...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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