BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|223718203 perilipin [Homo sapiens] (522 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|223718196 perilipin [Homo sapiens] 1026 0.0 gi|223718203 perilipin [Homo sapiens] 1026 0.0 gi|34577059 adipose differentiation-related protein [Homo sapiens] 130 3e-30 gi|20127486 mannose 6 phosphate receptor binding protein 1 [Homo... 120 4e-27 gi|116292172 lipid storage droplet protein 5 [Homo sapiens] 99 1e-20 gi|209862789 microtubule associated monoxygenase, calponin and L... 44 3e-04 gi|19111150 angiomotin isoform 2 [Homo sapiens] 43 6e-04 gi|166064029 angiomotin isoform 1 [Homo sapiens] 43 6e-04 gi|222352122 hypothetical protein LOC284297 [Homo sapiens] 42 0.002 gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 40 0.007 gi|85815829 SH3-domain binding protein 1 [Homo sapiens] 39 0.012 gi|29029597 glutamate receptor KA2 precursor [Homo sapiens] 38 0.020 gi|31377595 zinc finger CCCH-type containing 18 [Homo sapiens] 37 0.034 gi|27734911 DAZ interacting protein 1-like [Homo sapiens] 37 0.034 gi|23397672 homeobox D4 [Homo sapiens] 37 0.044 gi|239754370 PREDICTED: hypothetical protein [Homo sapiens] 37 0.057 gi|239748924 PREDICTED: hypothetical protein [Homo sapiens] 37 0.057 gi|239742946 PREDICTED: hypothetical protein [Homo sapiens] 37 0.057 gi|4505211 matrix metalloproteinase 15 preproprotein [Homo sapiens] 36 0.075 gi|239752201 PREDICTED: hypothetical protein XP_002348147 [Homo ... 36 0.098 gi|83921602 solute carrier family 38, member 10 isoform a [Homo ... 36 0.098 gi|13129048 oligonucleotide/oligosaccharide-binding fold contain... 36 0.098 gi|116805342 human immunodeficiency virus type I enhancer bindin... 36 0.098 gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 36 0.098 gi|110832843 TBP-associated factor 4 [Homo sapiens] 35 0.13 gi|188536047 SWI/SNF-related matrix-associated actin-dependent r... 35 0.13 gi|15890086 type IV collagen alpha 5 isoform 2 precursor [Homo s... 35 0.13 gi|4502955 type IV collagen alpha 5 isoform 1 precursor [Homo sa... 35 0.13 gi|15890088 type IV collagen alpha 5 isoform 3 precursor [Homo s... 35 0.13 gi|26190608 synaptojanin 2 [Homo sapiens] 35 0.13 >gi|223718196 perilipin [Homo sapiens] Length = 522 Score = 1026 bits (2653), Expect = 0.0 Identities = 522/522 (100%), Positives = 522/522 (100%) Query: 1 MAVNKGLTLLDGDLPEQENVLQRVLQLPVVSGTCECFQKTYTSTKEAHPLVASVCNAYEK 60 MAVNKGLTLLDGDLPEQENVLQRVLQLPVVSGTCECFQKTYTSTKEAHPLVASVCNAYEK Sbjct: 1 MAVNKGLTLLDGDLPEQENVLQRVLQLPVVSGTCECFQKTYTSTKEAHPLVASVCNAYEK 60 Query: 61 GVQSASSLAAWSMEPVVRRLSTQFTAANELACRGLDHLEEKIPALQYPPEKIASELKDTI 120 GVQSASSLAAWSMEPVVRRLSTQFTAANELACRGLDHLEEKIPALQYPPEKIASELKDTI Sbjct: 61 GVQSASSLAAWSMEPVVRRLSTQFTAANELACRGLDHLEEKIPALQYPPEKIASELKDTI 120 Query: 121 STRLRSARNSISVPIASTSDKVLGAALAGCELAWGVARDTAEFAANTRAGRLASGGADLA 180 STRLRSARNSISVPIASTSDKVLGAALAGCELAWGVARDTAEFAANTRAGRLASGGADLA Sbjct: 121 STRLRSARNSISVPIASTSDKVLGAALAGCELAWGVARDTAEFAANTRAGRLASGGADLA 180 Query: 181 LGSIEKVVEYLLPPDKEESAPAPGHQQAQKSPKAKPSLLSRVGALTNTLSRYTVQTMARA 240 LGSIEKVVEYLLPPDKEESAPAPGHQQAQKSPKAKPSLLSRVGALTNTLSRYTVQTMARA Sbjct: 181 LGSIEKVVEYLLPPDKEESAPAPGHQQAQKSPKAKPSLLSRVGALTNTLSRYTVQTMARA 240 Query: 241 LEQGHTVAMWIPGVVPLSSLAQWGASVAMQAVSRRRSEVRVPWLHSLAAAQEEDHEDQTD 300 LEQGHTVAMWIPGVVPLSSLAQWGASVAMQAVSRRRSEVRVPWLHSLAAAQEEDHEDQTD Sbjct: 241 LEQGHTVAMWIPGVVPLSSLAQWGASVAMQAVSRRRSEVRVPWLHSLAAAQEEDHEDQTD 300 Query: 301 TEGEDTEEEEELETEENKFSEVAALPGPRGLLGGVAHTLQKTLQTTISAVTWAPAAVLGM 360 TEGEDTEEEEELETEENKFSEVAALPGPRGLLGGVAHTLQKTLQTTISAVTWAPAAVLGM Sbjct: 301 TEGEDTEEEEELETEENKFSEVAALPGPRGLLGGVAHTLQKTLQTTISAVTWAPAAVLGM 360 Query: 361 AGRVLHLTPAPAVSSTKGRAMSLSDALKGVTDNVVDTVVHYVPLPRLSLMEPESEFRDID 420 AGRVLHLTPAPAVSSTKGRAMSLSDALKGVTDNVVDTVVHYVPLPRLSLMEPESEFRDID Sbjct: 361 AGRVLHLTPAPAVSSTKGRAMSLSDALKGVTDNVVDTVVHYVPLPRLSLMEPESEFRDID 420 Query: 421 NPPAEVERREAERRASGAPSAGPEPAPRLAQPRRSLRSAQSPGAPPGPGLEDEVATPAAP 480 NPPAEVERREAERRASGAPSAGPEPAPRLAQPRRSLRSAQSPGAPPGPGLEDEVATPAAP Sbjct: 421 NPPAEVERREAERRASGAPSAGPEPAPRLAQPRRSLRSAQSPGAPPGPGLEDEVATPAAP 480 Query: 481 RPGFPAVPREKPKRRVSDSFFRPSVMEPILGRTHYSQLRKKS 522 RPGFPAVPREKPKRRVSDSFFRPSVMEPILGRTHYSQLRKKS Sbjct: 481 RPGFPAVPREKPKRRVSDSFFRPSVMEPILGRTHYSQLRKKS 522 >gi|223718203 perilipin [Homo sapiens] Length = 522 Score = 1026 bits (2653), Expect = 0.0 Identities = 522/522 (100%), Positives = 522/522 (100%) Query: 1 MAVNKGLTLLDGDLPEQENVLQRVLQLPVVSGTCECFQKTYTSTKEAHPLVASVCNAYEK 60 MAVNKGLTLLDGDLPEQENVLQRVLQLPVVSGTCECFQKTYTSTKEAHPLVASVCNAYEK Sbjct: 1 MAVNKGLTLLDGDLPEQENVLQRVLQLPVVSGTCECFQKTYTSTKEAHPLVASVCNAYEK 60 Query: 61 GVQSASSLAAWSMEPVVRRLSTQFTAANELACRGLDHLEEKIPALQYPPEKIASELKDTI 120 GVQSASSLAAWSMEPVVRRLSTQFTAANELACRGLDHLEEKIPALQYPPEKIASELKDTI Sbjct: 61 GVQSASSLAAWSMEPVVRRLSTQFTAANELACRGLDHLEEKIPALQYPPEKIASELKDTI 120 Query: 121 STRLRSARNSISVPIASTSDKVLGAALAGCELAWGVARDTAEFAANTRAGRLASGGADLA 180 STRLRSARNSISVPIASTSDKVLGAALAGCELAWGVARDTAEFAANTRAGRLASGGADLA Sbjct: 121 STRLRSARNSISVPIASTSDKVLGAALAGCELAWGVARDTAEFAANTRAGRLASGGADLA 180 Query: 181 LGSIEKVVEYLLPPDKEESAPAPGHQQAQKSPKAKPSLLSRVGALTNTLSRYTVQTMARA 240 LGSIEKVVEYLLPPDKEESAPAPGHQQAQKSPKAKPSLLSRVGALTNTLSRYTVQTMARA Sbjct: 181 LGSIEKVVEYLLPPDKEESAPAPGHQQAQKSPKAKPSLLSRVGALTNTLSRYTVQTMARA 240 Query: 241 LEQGHTVAMWIPGVVPLSSLAQWGASVAMQAVSRRRSEVRVPWLHSLAAAQEEDHEDQTD 300 LEQGHTVAMWIPGVVPLSSLAQWGASVAMQAVSRRRSEVRVPWLHSLAAAQEEDHEDQTD Sbjct: 241 LEQGHTVAMWIPGVVPLSSLAQWGASVAMQAVSRRRSEVRVPWLHSLAAAQEEDHEDQTD 300 Query: 301 TEGEDTEEEEELETEENKFSEVAALPGPRGLLGGVAHTLQKTLQTTISAVTWAPAAVLGM 360 TEGEDTEEEEELETEENKFSEVAALPGPRGLLGGVAHTLQKTLQTTISAVTWAPAAVLGM Sbjct: 301 TEGEDTEEEEELETEENKFSEVAALPGPRGLLGGVAHTLQKTLQTTISAVTWAPAAVLGM 360 Query: 361 AGRVLHLTPAPAVSSTKGRAMSLSDALKGVTDNVVDTVVHYVPLPRLSLMEPESEFRDID 420 AGRVLHLTPAPAVSSTKGRAMSLSDALKGVTDNVVDTVVHYVPLPRLSLMEPESEFRDID Sbjct: 361 AGRVLHLTPAPAVSSTKGRAMSLSDALKGVTDNVVDTVVHYVPLPRLSLMEPESEFRDID 420 Query: 421 NPPAEVERREAERRASGAPSAGPEPAPRLAQPRRSLRSAQSPGAPPGPGLEDEVATPAAP 480 NPPAEVERREAERRASGAPSAGPEPAPRLAQPRRSLRSAQSPGAPPGPGLEDEVATPAAP Sbjct: 421 NPPAEVERREAERRASGAPSAGPEPAPRLAQPRRSLRSAQSPGAPPGPGLEDEVATPAAP 480 Query: 481 RPGFPAVPREKPKRRVSDSFFRPSVMEPILGRTHYSQLRKKS 522 RPGFPAVPREKPKRRVSDSFFRPSVMEPILGRTHYSQLRKKS Sbjct: 481 RPGFPAVPREKPKRRVSDSFFRPSVMEPILGRTHYSQLRKKS 522 >gi|34577059 adipose differentiation-related protein [Homo sapiens] Length = 437 Score = 130 bits (327), Expect = 3e-30 Identities = 117/453 (25%), Positives = 199/453 (43%), Gaps = 62/453 (13%) Query: 17 QENVLQRVLQLPVVSGTCECFQKTYTSTKEAHPLVASVCNAYEKGVQSASSLAAWSMEPV 76 Q +V+ RV+ LP+VS T + Y STK+ +P + SVC E GV++ +S+A S P+ Sbjct: 9 QPSVVTRVVNLPLVSSTYDLMSSAYLSTKDQYPYLKSVCEMAENGVKTITSVAMTSALPI 68 Query: 77 VRRLSTQFTAANELACRGLDHLEEKIPALQYPPEKIASE-------LKDTISTRLRSARN 129 +++L Q AN AC+GLD +EE++P L P +I + KD ++T + A++ Sbjct: 69 IQKLEPQIAVANTYACKGLDRIEERLPILNQPSTQIVANAKGAVTGAKDAVTTTVTGAKD 128 Query: 130 SISVPIASTSDKVLGAALAGCELAWGVARDTAEFAANTRAGRLASGGADLALGSIEKVVE 189 S++ I DK GA E V + +R +L S G + AL E +VE Sbjct: 129 SVASTITGVMDKTKGAVTGSVEKTKSVVSGSINTVLGSRMMQLVSSGVENALTKSELLVE 188 Query: 190 YLLPPDKE----ESAPAPGHQQAQKSPKAKPSLLSRVGALTNTL-SRYTVQTMAR---AL 241 LP +E E+ G Q KPS R+G+L+ L SR Q ++R A Sbjct: 189 QYLPLTEEELEKEAKKVEGFDLVQ-----KPSYYVRLGSLSTKLHSRAYQQALSRVKEAK 243 Query: 242 EQGHTVAMWIPGVVPLSSLAQWGASVAMQAVSRRRSEVRVPWLHSLAAAQEEDHEDQTDT 301 ++ + V L A+ A Q + + ++ + W+ E + Sbjct: 244 QKSQQTISQLHSTVHLIEFARKNVYSANQKIQDAQDKLYLSWV-----------EWKRSI 292 Query: 302 EGEDTEEEEELETEENKFSEVAALPGPRGLLGGVAHTLQKTLQTTISAVTWAPAAVLG-- 359 +DT+E E E++ +A + LQ T T +S + P + Sbjct: 293 GYDDTDESHCAEHIESRTLAIAR---------NLTQQLQTTCHTLLSNIQGVPQNIQDQA 343 Query: 360 -----MAGRVLHLTPAPA---------VSSTKGRAMSLSDALKGVTDNVVDTVVHYVPLP 405 MAG + + A ++S+KG+ + ++L D+V+D +V+ PL Sbjct: 344 KHMGVMAGDIYSVFRNAASFKEVSDSLLTSSKGQLQKMKESL----DDVMDYLVNNTPLN 399 Query: 406 RL--SLMEPESEFRDIDNPPAEVERREAERRAS 436 L +E ++ + AE+++ E + S Sbjct: 400 WLVGPFYPQLTESQNAQDQGAEMDKSSQETQRS 432 >gi|20127486 mannose 6 phosphate receptor binding protein 1 [Homo sapiens] Length = 434 Score = 120 bits (300), Expect = 4e-27 Identities = 68/232 (29%), Positives = 123/232 (53%), Gaps = 12/232 (5%) Query: 16 EQENVLQRVLQLPVVSGTCECFQKTYTSTKEAHPLVASVCNAYEKGVQSASSLAAWSMEP 75 +Q +V+ RV +P++S TC+ Y STKE++P + +VC+A EKGV++ ++ A +P Sbjct: 21 QQPSVVDRVASMPLISSTCDMVSAAYASTKESYPHIKTVCDAAEKGVRTLTAAAVSGAQP 80 Query: 76 VVRRLSTQFTAANELACRGLDHLEEKIPALQYPPEKIASELKDTISTR-------LRSAR 128 ++ +L Q +A+E A RGLD LEE +P LQ P EK+ ++ K+ +S++ + SA+ Sbjct: 81 ILSKLEPQIASASEYAHRGLDKLEENLPILQQPTEKVLADTKELVSSKVSGAQEMVSSAK 140 Query: 129 NSISVPIASTSDKVLGAALAGCELAWGVARDTAEFAANTRAGRLASGGADLALGSIEKVV 188 ++++ ++ D GA +G + V + +R G++ G D LG E+ Sbjct: 141 DTVATQLSEAVDATRGAVQSGVDKTKSVVTGGVQSVMGSRLGQMVLSGVDTVLGKSEEWA 200 Query: 189 EYLLPPDKEESA----PAPGHQQAQ-KSPKAKPSLLSRVGALTNTLSRYTVQ 235 + LP E A G A + + + S R+G+L+ L ++ + Sbjct: 201 DNHLPLTDAELARIATSLDGFDVASVQQQRQEQSYFVRLGSLSERLRQHAYE 252 >gi|116292172 lipid storage droplet protein 5 [Homo sapiens] Length = 463 Score = 98.6 bits (244), Expect = 1e-20 Identities = 100/401 (24%), Positives = 166/401 (41%), Gaps = 53/401 (13%) Query: 16 EQENVLQRVLQLPVVSGTCECFQKTYTSTKEAHPLVASVCNAYEKGVQSASSLAAWSMEP 75 +Q+NV+QRV+ LP+V TC Y++ K+ HPL+ S C E V ++ A +P Sbjct: 18 DQQNVVQRVVALPLVRATCTAVCDVYSAAKDRHPLLGSACRLAENCVCGLTTRALDHAQP 77 Query: 76 VVRRLSTQFTAANELACRGLDHLEEKIPALQYPPEKIASELKDTISTRLRSARNSISVPI 135 ++ L Q N LACRGLD LEEK+P LQ P E + + KD + Sbjct: 78 LLEHLQPQLATMNSLACRGLDKLEEKLPFLQQPSETVVTSAKDVV--------------- 122 Query: 136 ASTSDKVLGAALAGCELAWGVARDTAEFAANTRAGRLASGGADLALGSIEKVVEYLLPPD 195 AS+ V+ A G W V R S D+ L E++V++ LP Sbjct: 123 ASSVTGVVDLARRGRR--WSV-----------ELKRSVSHAVDVVLEKSEELVDHFLPMT 169 Query: 196 KEE----SAPAPGHQQAQ-KSPKAKPSLLSRVGALTNTLS----RYTVQTMARALEQGHT 246 +EE +A A G + + + + R+G+L+ + ++V + ++ + Sbjct: 170 EEELAALAAEAEGPEVGSVEDQRRQQGYFVRLGSLSARIRHLAYEHSVGKLRQSKHRAQD 229 Query: 247 VAMWIPGVVPLSSLAQWGASVAMQAVSRRRSEVRVPWLHSLAAAQEEDHEDQTDTEGEDT 306 + + L Q G + A + E+ W + + ++ E E Sbjct: 230 TLAQLQETLELIDHMQCGVTPTAPACPGKVHELWGEW-----GQRPPESRRRSQAELETL 284 Query: 307 EEEEELETEENKFSEVAALPGPRGLLGGVAHTLQKTLQTTISAVTWAPAAVLGMAGRVLH 366 L T+E + + A RGL G + + ++ ++ A+ A A R Sbjct: 285 VLSRSL-TQELQGTVEALESSVRGLPAGAQEKVAE-VRRSVDALQTAFA-----DARCFR 337 Query: 367 LTPAPAVSSTKGRAMSLSDALKGVTDNVVDTVVHYVPLPRL 407 PA A++ +GR D +++ VV VPLP L Sbjct: 338 DVPAAALAEGRGRVAH----AHACVDELLELVVQAVPLPWL 374 >gi|209862789 microtubule associated monoxygenase, calponin and LIM domain containing 3 isoform 1 [Homo sapiens] Length = 2002 Score = 44.3 bits (103), Expect = 3e-04 Identities = 58/251 (23%), Positives = 97/251 (38%), Gaps = 24/251 (9%) Query: 263 WGASVAMQAVSRRRSEVRVPWLHSLAAAQEEDHEDQTDTEGE-----DTEEEEELETEEN 317 W +V + A+ + +SE + S EE+ E++ + E E D EEEE E Sbjct: 963 WKEAVRIHALLKGKSEEELEASKSFGPGNEEEEEEEEEYEEEEEEDYDEEEEESSEAGNQ 1022 Query: 318 KFSEVAALPGPRGLLGGV--AHTLQKTLQTTISAVTWAPAAVLGMAGRVLHLTPAPAVSS 375 + +V P + V H ++ + ++ + + A+ + L + Sbjct: 1023 RLQQVMHAADPLEIQADVHWTHIREREEEERMAPASESSASGAPLDENDLEEDVDSEPAE 1082 Query: 376 TKGRAMSLSDALKGVTDNVVDTVVHY----------VPLPRLSLMEPESEFR---DIDNP 422 +G A D G T +D H+ + LP + E E E R D + Sbjct: 1083 IEGEA--AEDGDPGDTGAELDDDQHWSDSPSDADRELRLPCPAEGEAELELRVSEDEEKL 1140 Query: 423 PAEVERREAERRASGAPSAGPEPAPRLAQPRRSLRSAQSPGAPPGPGLEDEVATPAAPRP 482 PA + +E + +P P+ + L P S S + P PP P E + P Sbjct: 1141 PASPKHQERGPSQATSPIRSPQESALLFIPVHS-PSTEGPQLPPVPAATQEKSPEERLFP 1199 Query: 483 GFPAVPREKPK 493 P +P+EKPK Sbjct: 1200 E-PLLPKEKPK 1209 >gi|19111150 angiomotin isoform 2 [Homo sapiens] Length = 675 Score = 43.1 bits (100), Expect = 6e-04 Identities = 48/197 (24%), Positives = 69/197 (35%), Gaps = 23/197 (11%) Query: 301 TEGEDTEEEEELETEENKFSEVA--ALPGPRGLLGGVAHTLQKTLQTTISAVTWAPAAVL 358 T D + E TE NK + VA ++P P A T + V AP AV Sbjct: 448 TGSRDCSTQTERGTESNKTAAVAPISVPAPVAAAATAAAITATAATITTTMVAAAPVAVA 507 Query: 359 GMAGRVLHLTPAPAVSSTKGRAMSLSDALKGVTDNVVDTVVHYVPLPRLSLMEPESEFRD 418 A P+PA ++ A+S + A + +P + + + Sbjct: 508 AAAAPAAAAAPSPATAAATAAAVSPAAAGQ---------------IPAAASVASAAAVAP 552 Query: 419 IDNPPAEVERREAERRASGAPSAGPEPAPRLAQ---PRRSLRSAQSPGAPPGPGLEDEVA 475 A V+ A AP+ P PAP AQ P ++ +P P P Sbjct: 553 SAAAAAAVQVAPAAPAPVPAPALVPVPAPAAAQASAPAQTQAPTSAPAVAPTPA---PTP 609 Query: 476 TPAAPRPGFPAVPREKP 492 TPA + PA P P Sbjct: 610 TPAVAQAEVPASPATGP 626 >gi|166064029 angiomotin isoform 1 [Homo sapiens] Length = 1084 Score = 43.1 bits (100), Expect = 6e-04 Identities = 48/197 (24%), Positives = 69/197 (35%), Gaps = 23/197 (11%) Query: 301 TEGEDTEEEEELETEENKFSEVA--ALPGPRGLLGGVAHTLQKTLQTTISAVTWAPAAVL 358 T D + E TE NK + VA ++P P A T + V AP AV Sbjct: 857 TGSRDCSTQTERGTESNKTAAVAPISVPAPVAAAATAAAITATAATITTTMVAAAPVAVA 916 Query: 359 GMAGRVLHLTPAPAVSSTKGRAMSLSDALKGVTDNVVDTVVHYVPLPRLSLMEPESEFRD 418 A P+PA ++ A+S + A + +P + + + Sbjct: 917 AAAAPAAAAAPSPATAAATAAAVSPAAAGQ---------------IPAAASVASAAAVAP 961 Query: 419 IDNPPAEVERREAERRASGAPSAGPEPAPRLAQ---PRRSLRSAQSPGAPPGPGLEDEVA 475 A V+ A AP+ P PAP AQ P ++ +P P P Sbjct: 962 SAAAAAAVQVAPAAPAPVPAPALVPVPAPAAAQASAPAQTQAPTSAPAVAPTPA---PTP 1018 Query: 476 TPAAPRPGFPAVPREKP 492 TPA + PA P P Sbjct: 1019 TPAVAQAEVPASPATGP 1035 >gi|222352122 hypothetical protein LOC284297 [Homo sapiens] Length = 1573 Score = 41.6 bits (96), Expect = 0.002 Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 1/131 (0%) Query: 338 TLQKTLQTTISAVTWAPAAVLGMAGRVLHLTPAPAVSSTKGRAMSLSDALKGVTDNVVDT 397 +L +L T +S+ T AP + ++ PAP S+++ + S AL+ + + T Sbjct: 1340 SLPTSLGTELSSPTLAPTVKPSLHPQLTFTAPAPHTSTSQIPTLEPSPALES-SPSRSST 1398 Query: 398 VVHYVPLPRLSLMEPESEFRDIDNPPAEVERREAERRASGAPSAGPEPAPRLAQPRRSLR 457 PL P S+ ++ PP ++ S P P P P L Sbjct: 1399 ATSMDPLSTEDFKPPRSQSPNLTPPPTHTPHSASDLTVSPDPLLSPTAHPLDHPPLDPLT 1458 Query: 458 SAQSPGAPPGP 468 +PG PGP Sbjct: 1459 LGPTPGQSPGP 1469 >gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] Length = 538 Score = 39.7 bits (91), Expect = 0.007 Identities = 27/72 (37%), Positives = 31/72 (43%), Gaps = 2/72 (2%) Query: 422 PPAEVERREAERRASGAPSAGPEPAPRLAQPRRSLRSAQSPGAPPGPGLEDEVATPAAPR 481 P A A R A+ A +A P P P PR R+A PP P VA PA PR Sbjct: 139 PVAAAAPARAPRAAAAAATAPPSPGPAQPGPRAQ-RAAPLAAPPPAPAAPPAVAPPAGPR 197 Query: 482 PG-FPAVPREKP 492 PAV +P Sbjct: 198 RAPPPAVAAREP 209 Score = 33.1 bits (74), Expect = 0.63 Identities = 38/139 (27%), Positives = 51/139 (36%), Gaps = 10/139 (7%) Query: 360 MAGRVLHLTPAPAVSSTKGRAMSLSDALKGVTDNVVDTVVHY------VPLPRLSLMEPE 413 MAG P A ++T A S S A + ++DT+ L R+ M Sbjct: 1 MAGPPALPPPETAAAATTAAAASSSAASPHYQEWILDTIDSLRSRKARPDLERICRMVRR 60 Query: 414 SEFRDIDNPPAEVERREAER---RASGAPSAGPEPAPRLAQPRRSLRSAQSPGAPPG-PG 469 + + AE+E+ +R R S S A R+ PRR P AP G P Sbjct: 61 RHGPEPERTRAELEKLIQQRAVLRVSYKGSISYRNAARVQPPRRGATPPAPPRAPRGAPA 120 Query: 470 LEDEVATPAAPRPGFPAVP 488 A P P P P P Sbjct: 121 AAAAAAPPPTPAPPPPPAP 139 Score = 31.2 bits (69), Expect = 2.4 Identities = 26/80 (32%), Positives = 32/80 (40%), Gaps = 13/80 (16%) Query: 422 PPAEVERREAERRASGAPSAGPEPAP-------RLAQPRRSLRSAQSPG-APPGPGLED- 472 PPA A+ A + P PAP A P R+ R+A + APP PG Sbjct: 108 PPAPPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQP 167 Query: 473 ----EVATPAAPRPGFPAVP 488 + A P A P PA P Sbjct: 168 GPRAQRAAPLAAPPPAPAAP 187 Score = 30.4 bits (67), Expect = 4.1 Identities = 22/75 (29%), Positives = 29/75 (38%), Gaps = 4/75 (5%) Query: 422 PPAEVERREAERRASGAPSAGPEPAP----RLAQPRRSLRSAQSPGAPPGPGLEDEVATP 477 PP+ + R AP A P PAP +A P R+ A P L P Sbjct: 159 PPSPGPAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAGPRRAPPPAVAAREPPLPPPPQPP 218 Query: 478 AAPRPGFPAVPREKP 492 A P+ P P+ +P Sbjct: 219 APPQQQQPPPPQPQP 233 >gi|85815829 SH3-domain binding protein 1 [Homo sapiens] Length = 701 Score = 38.9 bits (89), Expect = 0.012 Identities = 48/175 (27%), Positives = 70/175 (40%), Gaps = 35/175 (20%) Query: 336 AHTLQKTLQTTISAVTWAPAAVLGMAGRVLHLTPAPAVSSTKGRAMSLSDALKGVTDNVV 395 A TLQ T+ +++ AV A TPAPA + A +L+ A T Sbjct: 483 AVTLQDTVSDRLASEELPSTAVPTPA-----TTPAPAPAPAPAPAPALASA---ATKERT 534 Query: 396 DTVVHYVPL-PRLSLMEPESEFRDIDNPPAEVERREAERRASGAPSAGPEPAPRLAQPRR 454 ++ V P P+++ PE+ P E R +R A P+ P P+++ R Sbjct: 535 ESEVPPRPASPKVTRSPPETA------APVEDMARRTKRPAPARPTM---PPPQVSGSR- 584 Query: 455 SLRSAQSPGAPPGPGLEDEVATPAAPRPGFPAVPREKPKRRVSDSFFRPSVMEPI 509 SP APP P P G P P+ P+R V S P+V P+ Sbjct: 585 -----SSPPAPPLP-----------PGSGSPGTPQALPRRLVGSSLRAPTVPPPL 623 >gi|29029597 glutamate receptor KA2 precursor [Homo sapiens] Length = 980 Score = 38.1 bits (87), Expect = 0.020 Identities = 27/60 (45%), Positives = 33/60 (55%), Gaps = 6/60 (10%) Query: 436 SGAPSAGPEPAP--RLAQPRRSLRS--AQSPGAPP-GPGLEDEVATPAAPRPGFPAVPRE 490 SGA A P P R+ Q R +++ A GAPP G G+ E +P PRPG PA PRE Sbjct: 917 SGARPAAPTPCTHVRVCQECRRIQALRASGAGAPPRGLGVPAEATSPPRPRPG-PAGPRE 975 >gi|31377595 zinc finger CCCH-type containing 18 [Homo sapiens] Length = 953 Score = 37.4 bits (85), Expect = 0.034 Identities = 23/61 (37%), Positives = 28/61 (45%), Gaps = 8/61 (13%) Query: 429 REAERRASGAPSAGPEPAPRLAQPRRSLRSAQSPGAPPGPGLEDEVATPAAPRPGFPAVP 488 R R S +PS P P+P R S+R+ P PPG E V PA P PA P Sbjct: 596 RSRSRSFSSSPSPSPTPSPH----RPSIRTKGEPAPPPGKAGEKSVKKPAPP----PAPP 647 Query: 489 R 489 + Sbjct: 648 Q 648 >gi|27734911 DAZ interacting protein 1-like [Homo sapiens] Length = 767 Score = 37.4 bits (85), Expect = 0.034 Identities = 52/216 (24%), Positives = 84/216 (38%), Gaps = 9/216 (4%) Query: 300 DTEGEDTEEEEELETEENKFSEVAALPGPRGLLGGVAHTLQKTLQTTISAVTWAPAAVLG 359 DTE ED+ EEE ++++ + +AAL LL L+ TL+ + ++ A Sbjct: 421 DTE-EDSPEEEMEDSQDEQHKVLAALRRNPTLLKHFRPILEDTLEEKLESMGIRKDAKGI 479 Query: 360 MAGRVLHLTPAPAVS-STKGRAMSLSDALKGVTDNVVDTVVHYVPLPRLSLMEPESEFRD 418 + HL V K R S +L+G V + ++ +P+ + Sbjct: 480 SIQTLRHLESLLRVQREQKARKFSEFLSLRGKLVKEVTSRAKERQENGAAVSQPDGQ-PS 538 Query: 419 IDNPPAEVERREAERRAS----GAPSAGPEPAPRLAQPRRSLRSA--QSPGAPPGPGLED 472 + + + + REA+ + PS EP P Q S S+ Q P PGL Sbjct: 539 VKSQQSALVTREAQPKTRTLQVALPSTPAEPPPPTRQSHGSHGSSLTQVSAPAPHPGLHG 598 Query: 473 EVATPAAPRPGFPAVPREKPKRRVSDSFFRPSVMEP 508 +TP + PG P + D R S+ P Sbjct: 599 PSSTPPSSGPGMSTPPFSSEEDSEGDRVQRVSLQPP 634 >gi|23397672 homeobox D4 [Homo sapiens] Length = 255 Score = 37.0 bits (84), Expect = 0.044 Identities = 27/87 (31%), Positives = 37/87 (42%), Gaps = 9/87 (10%) Query: 439 PSAGPEPAPRLAQPRRSLRSAQSPGAP------PGPGLEDEVATPAAPRPGFPAVPREKP 492 P G P P A P R Q PG P PG A P AP PG A + P Sbjct: 61 PFGGSGPGPGSALPARG--HGQEPGGPGGHYAAPGEPCPAPPAPPPAPLPGARAYSQSDP 118 Query: 493 KRRVSDSFFR-PSVMEPILGRTHYSQL 518 K+ S + + P+V+ P + + H + + Sbjct: 119 KQPPSGTALKQPAVVYPWMKKVHVNSV 145 >gi|239754370 PREDICTED: hypothetical protein [Homo sapiens] Length = 435 Score = 36.6 bits (83), Expect = 0.057 Identities = 27/74 (36%), Positives = 33/74 (44%), Gaps = 4/74 (5%) Query: 424 AEVERREAERRASGAPSAGPEPAPRLAQPRR--SLRSAQSPGAPPGPGLEDEVATPAAPR 481 AE ER AP EPAP RR SLR +P AP P A P+ + Sbjct: 130 AEREREVRTPSGGAAPCVPDEPAPAARTRRRDPSLRRTLAPCAPAWPAPPPCPAPPSRSK 189 Query: 482 PGFPAVPREKPKRR 495 P A R++P+RR Sbjct: 190 PALAA--RQQPQRR 201 >gi|239748924 PREDICTED: hypothetical protein [Homo sapiens] Length = 435 Score = 36.6 bits (83), Expect = 0.057 Identities = 27/74 (36%), Positives = 33/74 (44%), Gaps = 4/74 (5%) Query: 424 AEVERREAERRASGAPSAGPEPAPRLAQPRR--SLRSAQSPGAPPGPGLEDEVATPAAPR 481 AE ER AP EPAP RR SLR +P AP P A P+ + Sbjct: 130 AEREREVRTPSGGAAPCVPDEPAPAARTRRRDPSLRRTLAPCAPAWPAPPPCPAPPSRSK 189 Query: 482 PGFPAVPREKPKRR 495 P A R++P+RR Sbjct: 190 PALAA--RQQPQRR 201 >gi|239742946 PREDICTED: hypothetical protein [Homo sapiens] Length = 435 Score = 36.6 bits (83), Expect = 0.057 Identities = 27/74 (36%), Positives = 33/74 (44%), Gaps = 4/74 (5%) Query: 424 AEVERREAERRASGAPSAGPEPAPRLAQPRR--SLRSAQSPGAPPGPGLEDEVATPAAPR 481 AE ER AP EPAP RR SLR +P AP P A P+ + Sbjct: 130 AEREREVRTPSGGAAPCVPDEPAPAARTRRRDPSLRRTLAPCAPAWPAPPPCPAPPSRSK 189 Query: 482 PGFPAVPREKPKRR 495 P A R++P+RR Sbjct: 190 PALAA--RQQPQRR 201 >gi|4505211 matrix metalloproteinase 15 preproprotein [Homo sapiens] Length = 669 Score = 36.2 bits (82), Expect = 0.075 Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 11/92 (11%) Query: 408 SLMEPESEFRDIDNPPAEVERREAERRASGAPSAGPEPAPRL-----AQPRRSLRSAQSP 462 ++M P +++D+DN + ++ G P P+P L +P R P Sbjct: 275 AIMAPFYQWKDVDNFKLPEDDLRGIQQLYGTPDGQPQPTQPLPTVTPRRPGRPDHRPPRP 334 Query: 463 GAPPGPGLEDEVATPAAPRPGFPAVPR--EKP 492 PP PG + E P+PG P PR E+P Sbjct: 335 PQPPPPGGKPE----RPPKPGPPVQPRATERP 362 >gi|239752201 PREDICTED: hypothetical protein XP_002348147 [Homo sapiens] Length = 935 Score = 35.8 bits (81), Expect = 0.098 Identities = 37/107 (34%), Positives = 45/107 (42%), Gaps = 20/107 (18%) Query: 428 RREAERRASGAPSAG----PEPAPRLAQPRRSLRSAQSPGAP--PGP----------GLE 471 RRE+ RR +GA S G R + RR L A S G P P P GL Sbjct: 815 RRESGRRRAGATSQGAIRRAASRARKGESRRPL-PANSAGRPALPSPAAARSARGSWGLR 873 Query: 472 DEVATPAAPR--PGFPAVPREKPKRRVSDSFFRPSVMEPILGRTHYS 516 + AAPR P F P +P+RR+ S P GR+ YS Sbjct: 874 ASRPSRAAPRGPPNFQRCPAPRPRRRLGVSIVGPGRAHS-AGRSSYS 919 >gi|83921602 solute carrier family 38, member 10 isoform a [Homo sapiens] Length = 1119 Score = 35.8 bits (81), Expect = 0.098 Identities = 37/132 (28%), Positives = 55/132 (41%), Gaps = 14/132 (10%) Query: 396 DTVVHYVPLPRLSLMEPE----SEFRDIDNPPAEVERREAERRASGAPSAGPEPAPRLAQ 451 +TV + PLP ++ + +D++ E R +G P GP+ PR AQ Sbjct: 771 ETVENLPPLPLDPVLRAPGGRPAPSQDLNQRSLEHSEGPVGRDPAGPPDGGPDTEPRAAQ 830 Query: 452 PRRSLRSAQSPGAPPGPGLEDEV--ATPAAPRPGFPAVPREKPKRRVSDSFFRPSVMEPI 509 + LR Q AP G E+ P P PA P+ R+++ F P + + Sbjct: 831 AK--LRDGQKDAAPRAAGTVKELPKGPEQVPVPD-PAREAGGPEERLAEEF--PGQSQDV 885 Query: 510 LGRTHYSQLRKK 521 G SQ RKK Sbjct: 886 TGG---SQDRKK 894 >gi|13129048 oligonucleotide/oligosaccharide-binding fold containing 2B [Homo sapiens] Length = 211 Score = 35.8 bits (81), Expect = 0.098 Identities = 37/154 (24%), Positives = 56/154 (36%), Gaps = 20/154 (12%) Query: 346 TISAVTWAPAAVLGMAGRVLHLTPAPAVSSTKGRAMSLSDALKGVTDNVVDTVVHYVPLP 405 +I+ W L G ++ LT A S KG ++L G + + + Y +P Sbjct: 49 SINISVWDDVGNLIQPGDIIRLTKGYA-SVFKG-CLTLYTGRGGDLQKIGEFCMVYSEVP 106 Query: 406 RLSLMEPESEFRDIDNPPAEVERREAERRASGAPSAGPEPAPRLAQPRRSLRSAQSPGAP 465 S PE + N +A + S ++ P P A P ++ AP Sbjct: 107 NFSEPNPEYSTQQAPN--------KAVQNDSNPSASQPTTGPSAASPASENQNGNGLSAP 158 Query: 466 PGPGLEDEVATPAAPRPGFPAVPREKPKRRVSDS 499 PGPG P P P P P R++ S Sbjct: 159 PGPG--------GGPHP--PHTPSHPPSTRITRS 182 >gi|116805342 human immunodeficiency virus type I enhancer binding protein 1 [Homo sapiens] Length = 2718 Score = 35.8 bits (81), Expect = 0.098 Identities = 48/201 (23%), Positives = 76/201 (37%), Gaps = 30/201 (14%) Query: 291 QEEDHEDQTDTEGEDTEEEEELETEENKFSEVAA----LPGPRGLLGGVAHTLQKTLQTT 346 +E D D+ D E ED +E+ + E+ + V A LP L V+ + Sbjct: 2178 EESDGPDEDDNENEDDDEDSQAESVLSATPSVTASPQHLPSRSSLQDPVSTDEDVRITDC 2237 Query: 347 ISAVTWAPAAVLGMAGRVLHLTPAPAVSSTKGRAMSLSDALKGVTDNVVDTV----VHYV 402 S V P VL A + A S + +S A + + DT+ Sbjct: 2238 FSGVHTDPMDVLPRALLTRMTVLSTAQSDYNRKTLSPGKARQRAARDENDTIPSVDTSRS 2297 Query: 403 PLPRLSLMEPESEF-----------------RDIDNPPAEVERREAERRASGAPS-AGPE 444 P ++S+ PESE + PPA E + + A+G PS A P Sbjct: 2298 PCHQMSVDYPESEEILRSSMAGKAVAITQSPSSVRLPPAAAE--HSPQTAAGMPSVASPH 2355 Query: 445 PAPRLAQPRRSLRSAQSPGAP 465 P P+ + ++ + +PG P Sbjct: 2356 PDPQ--EQKQQITLQPTPGLP 2374 >gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] Length = 904 Score = 35.8 bits (81), Expect = 0.098 Identities = 45/167 (26%), Positives = 64/167 (38%), Gaps = 11/167 (6%) Query: 338 TLQKTLQTTISAVTWAPAAVLGMA----GRVLHLTPAPAVSSTKGRAMSLSDALKGVTDN 393 T Q++ +T S V+ +P G G +P+PA K +S S+ KG Sbjct: 416 TPQQSNRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVE-LSESEEDKGGKMA 474 Query: 394 VVDTVVH---YVPLPRLSLMEPESEFRDIDNPP--AEVERREAERRASGAPSAGPEPAPR 448 D+V Y + S + S D P + V+ E RR +PS P+PR Sbjct: 475 AADSVQQRRQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPR 534 Query: 449 LAQPRRSLRSAQSPGAPPGPGLEDEVATPAAPRPGFPAVPREKPKRR 495 Q S R + P P +PA P P P P+RR Sbjct: 535 KRQKETSPRGRRRRSPSPPPTRRRRSPSPAPP-PRRRRTPTPPPRRR 580 Score = 33.1 bits (74), Expect = 0.63 Identities = 30/97 (30%), Positives = 37/97 (38%), Gaps = 8/97 (8%) Query: 406 RLSLMEPESEFRDIDNPPAEVERREAERRASGAPSAGPEPAPRLAQPRR---SLRSAQSP 462 R S P + R +P RR + P P R PRR ++ SP Sbjct: 547 RRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSP 606 Query: 463 GAPPGPGLEDEVATPAAPRPGFPAVPREKPKRRVSDS 499 PP + A+P P P A P PKRRVS S Sbjct: 607 SPPP----KRRTASPPPP-PKRRASPSPPPKRRVSHS 638 Score = 31.2 bits (69), Expect = 2.4 Identities = 21/86 (24%), Positives = 32/86 (37%), Gaps = 7/86 (8%) Query: 404 LPRLSLMEPESEFRDIDNPPAEVERREAERRASGAPSAGPEPAPRLAQPRRSLRSAQS-- 461 L + + + + RD + + E+RE R S P P R + RR + + S Sbjct: 141 LASMKKQDEDKDKRDKEEKESSREKRERSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRS 200 Query: 462 -----PGAPPGPGLEDEVATPAAPRP 482 P P E + TP P P Sbjct: 201 PRHRTKSRSPSPAPEKKEKTPELPEP 226 Score = 29.3 bits (64), Expect = 9.2 Identities = 22/84 (26%), Positives = 33/84 (39%), Gaps = 5/84 (5%) Query: 403 PLPRLSLMEPESEFRDIDNP-PAEVERREAERRASGAPSAGPEPAPRLAQPRRSLRSAQS 461 P+ R+S + + +P P V R + R SG+P + P P +S QS Sbjct: 720 PIRRVSRTPEPKKIKKAASPSPQSVRRVSSSRSVSGSPEPAAKKPPAPPSPVQS----QS 775 Query: 462 PGAPPGPGLEDEVATPAAPRPGFP 485 P P + + A P P P Sbjct: 776 PSTNWSPAVPVKKAKSPTPSPSPP 799 >gi|110832843 TBP-associated factor 4 [Homo sapiens] Length = 1085 Score = 35.4 bits (80), Expect = 0.13 Identities = 32/95 (33%), Positives = 39/95 (41%), Gaps = 19/95 (20%) Query: 403 PLPRLSLME--PESEFRDIDNPPAEVERREAERRASGAPSAGPEPAPRLAQPRR------ 454 P PR L+ P + PP A A+ A +AGPEPAP A P + Sbjct: 108 PSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAP--AGPAKPAGPAA 165 Query: 455 -SLRSAQSPGAPPGPGLEDEVATPAAPRPGFPAVP 488 + R+ PG PGPG P PG PA P Sbjct: 166 LAARAGPGPGPGPGPG--------PGPGPGKPAGP 192 Score = 35.0 bits (79), Expect = 0.17 Identities = 32/86 (37%), Positives = 36/86 (41%), Gaps = 19/86 (22%) Query: 422 PPAEVERREAERRASGAPSAGPE-PAPRLAQPRRSLRSAQSP----GAP------PGPGL 470 PPA +G P+A P P P AQ S +A +P G P PGPG Sbjct: 274 PPAPATLARPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPG- 332 Query: 471 EDEVATPAAPRPGFPAVPREKPKRRV 496 A AAP PG A E PKR V Sbjct: 333 ----AAAAAPAPGVKA---ESPKRVV 351 Score = 31.2 bits (69), Expect = 2.4 Identities = 25/86 (29%), Positives = 34/86 (39%), Gaps = 1/86 (1%) Query: 397 TVVHYVPLPRLSLMEPESEFRDIDNPPAEVERREAERRASGAPSAGPEPAPRLAQPRRSL 456 ++V+ P L L +P + I PP V A+ +P A P PA A P Sbjct: 216 SLVNNGPAALLPLPKPAAPGTVIQTPPF-VGAAAPPAPAAPSPPAAPAPAAPAAAPPPPP 274 Query: 457 RSAQSPGAPPGPGLEDEVATPAAPRP 482 + + PPG A PA P P Sbjct: 275 PAPATLARPPGHPAGPPTAAPAVPPP 300 Score = 30.0 bits (66), Expect = 5.4 Identities = 22/60 (36%), Positives = 24/60 (40%), Gaps = 11/60 (18%) Query: 435 ASGAPSAGPEPAPRLAQPRRSLRSAQSPGAP--PGPGLEDEVATPAAPRPGFPAVPREKP 492 A GAP A PEP P + R+ G P PGP PA P P PA P Sbjct: 79 AEGAPGAAPEPPP-------AGRARPGGGGPQRPGPPSPRRPLVPAGPAP--PAAKLRPP 129 Score = 30.0 bits (66), Expect = 5.4 Identities = 22/81 (27%), Positives = 33/81 (40%), Gaps = 10/81 (12%) Query: 423 PAEVERREAERRASGAPSAG-----PEPAPRLAQPRRSLRSAQSPGAPP-----GPGLED 472 PA V + A+ AP+ G P+ + A P +A P + GP ++ Sbjct: 322 PAGVSGQPGPGAAAAAPAPGVKAESPKRVVQAAPPAAQTLAASGPASTAASMVIGPTMQG 381 Query: 473 EVATPAAPRPGFPAVPREKPK 493 + +PAA P P P PK Sbjct: 382 ALPSPAAVPPPAPGTPTGLPK 402 >gi|188536047 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin c1 [Homo sapiens] Length = 1105 Score = 35.4 bits (80), Expect = 0.13 Identities = 51/212 (24%), Positives = 83/212 (39%), Gaps = 29/212 (13%) Query: 292 EEDHEDQTDTEGEDTEEEEELETEENKFSEVAALPGPRGLLGGVAHTLQKTLQTTIS--- 348 E++ E + D+E + + EE ETEENK E+ R + T +K ++ IS Sbjct: 813 EKNSEKEQDSEVSEDTKSEEKETEENK--ELTDTCKER-----ESDTGKKKVEHEISEGN 865 Query: 349 AVTWAPAAVLGMAGRVLHLTPAPAVSSTKGRAMSLSDALKGV---------TDNVVDTVV 399 T A AA+ A + HL A+ + +K + + ++D Sbjct: 866 VATAAAAALASAATKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREK 925 Query: 400 HYVPLPRLSLMEPESEFRDIDNPPAEVE-RREAERRASG-------APSAGPEPAPRLAQ 451 + R L+ F AE+ R++ E++ G S GP AP A Sbjct: 926 EALEQQRQQLLTERQNFHMEQLKYAELRARQQMEQQQHGQNPQQAHQHSGGPGLAPLGAA 985 Query: 452 PRRSLRSAQSPGAPPGPGLEDEVATPAAPRPG 483 + Q P PP P + ++ P P+PG Sbjct: 986 GHPGMMPHQQP--PPYPLMHHQMPPPHPPQPG 1015 >gi|15890086 type IV collagen alpha 5 isoform 2 precursor [Homo sapiens] Length = 1691 Score = 35.4 bits (80), Expect = 0.13 Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 6/74 (8%) Query: 422 PPAEVERREAERRASGAPSAGPEPAPRLAQPRRSLRSAQSPGAPPGPGLEDEVATPAAP- 480 PP V + + A G P P P+ P +++ PG P PG + +V P P Sbjct: 627 PPGPVGEKGIQGVA-GNPGQPGIPGPK-GDPGQTITQPGKPGLPGNPGRDGDVGLPGDPG 684 Query: 481 ---RPGFPAVPREK 491 +PG P +P K Sbjct: 685 LPGQPGLPGIPGSK 698 Score = 30.0 bits (66), Expect = 5.4 Identities = 27/99 (27%), Positives = 33/99 (33%), Gaps = 9/99 (9%) Query: 402 VPLPRLSLMEPESEFRDIDNPPAEVERREAERRASGAPSAGPEPAPRLAQPRRSLRSAQS 461 + LP L + E F I PP GA GP P R Sbjct: 361 IGLPGLPGEKGERGFPGIQGPPGLPG-------PPGAAVMGPPGPPGFPGERGQKGDEGP 413 Query: 462 PGA--PPGPGLEDEVATPAAPRPGFPAVPREKPKRRVSD 498 PG P PGL+ + P P P PA P P + + Sbjct: 414 PGISIPGPPGLDGQPGAPGLPGPPGPAGPHIPPSDEICE 452 >gi|4502955 type IV collagen alpha 5 isoform 1 precursor [Homo sapiens] Length = 1685 Score = 35.4 bits (80), Expect = 0.13 Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 6/74 (8%) Query: 422 PPAEVERREAERRASGAPSAGPEPAPRLAQPRRSLRSAQSPGAPPGPGLEDEVATPAAP- 480 PP V + + A G P P P+ P +++ PG P PG + +V P P Sbjct: 627 PPGPVGEKGIQGVA-GNPGQPGIPGPK-GDPGQTITQPGKPGLPGNPGRDGDVGLPGDPG 684 Query: 481 ---RPGFPAVPREK 491 +PG P +P K Sbjct: 685 LPGQPGLPGIPGSK 698 Score = 30.0 bits (66), Expect = 5.4 Identities = 27/99 (27%), Positives = 33/99 (33%), Gaps = 9/99 (9%) Query: 402 VPLPRLSLMEPESEFRDIDNPPAEVERREAERRASGAPSAGPEPAPRLAQPRRSLRSAQS 461 + LP L + E F I PP GA GP P R Sbjct: 361 IGLPGLPGEKGERGFPGIQGPPGLPG-------PPGAAVMGPPGPPGFPGERGQKGDEGP 413 Query: 462 PGA--PPGPGLEDEVATPAAPRPGFPAVPREKPKRRVSD 498 PG P PGL+ + P P P PA P P + + Sbjct: 414 PGISIPGPPGLDGQPGAPGLPGPPGPAGPHIPPSDEICE 452 >gi|15890088 type IV collagen alpha 5 isoform 3 precursor [Homo sapiens] Length = 1688 Score = 35.4 bits (80), Expect = 0.13 Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 6/74 (8%) Query: 422 PPAEVERREAERRASGAPSAGPEPAPRLAQPRRSLRSAQSPGAPPGPGLEDEVATPAAP- 480 PP V + + A G P P P+ P +++ PG P PG + +V P P Sbjct: 627 PPGPVGEKGIQGVA-GNPGQPGIPGPK-GDPGQTITQPGKPGLPGNPGRDGDVGLPGDPG 684 Query: 481 ---RPGFPAVPREK 491 +PG P +P K Sbjct: 685 LPGQPGLPGIPGSK 698 Score = 30.0 bits (66), Expect = 5.4 Identities = 27/99 (27%), Positives = 33/99 (33%), Gaps = 9/99 (9%) Query: 402 VPLPRLSLMEPESEFRDIDNPPAEVERREAERRASGAPSAGPEPAPRLAQPRRSLRSAQS 461 + LP L + E F I PP GA GP P R Sbjct: 361 IGLPGLPGEKGERGFPGIQGPPGLPG-------PPGAAVMGPPGPPGFPGERGQKGDEGP 413 Query: 462 PGA--PPGPGLEDEVATPAAPRPGFPAVPREKPKRRVSD 498 PG P PGL+ + P P P PA P P + + Sbjct: 414 PGISIPGPPGLDGQPGAPGLPGPPGPAGPHIPPSDEICE 452 >gi|26190608 synaptojanin 2 [Homo sapiens] Length = 1496 Score = 35.4 bits (80), Expect = 0.13 Identities = 25/65 (38%), Positives = 29/65 (44%), Gaps = 10/65 (15%) Query: 438 APSAGPEPAPRLAQP-----RRSLRSAQSPGAPPGPGLEDEVATPAAPRPGFPAVPREKP 492 AP P P PR QP R S R S APPG G A+ P P VP+ P Sbjct: 1280 APRVPPVPKPRTFQPGKAAERPSHRKPASDEAPPGAG-----ASVPPPLEAPPLVPKVPP 1334 Query: 493 KRRVS 497 +R+ S Sbjct: 1335 RRKKS 1339 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.312 0.127 0.365 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 21,999,194 Number of Sequences: 37866 Number of extensions: 1176340 Number of successful extensions: 11879 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 154 Number of HSP's successfully gapped in prelim test: 544 Number of HSP's that attempted gapping in prelim test: 9211 Number of HSP's gapped (non-prelim): 2769 length of query: 522 length of database: 18,247,518 effective HSP length: 107 effective length of query: 415 effective length of database: 14,195,856 effective search space: 5891280240 effective search space used: 5891280240 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.