Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 222352151
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|222352151 poly(rC) binding protein 1 [Homo sapiens]
(356 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|222352151 poly(rC) binding protein 1 [Homo sapiens] 702 0.0
gi|14141168 poly(rC) binding protein 2 isoform a [Homo sapiens] 575 e-164
gi|193083108 poly(rC) binding protein 2 isoform d [Homo sapiens] 569 e-162
gi|14141166 poly(rC) binding protein 2 isoform b [Homo sapiens] 565 e-161
gi|193083110 poly(rC) binding protein 2 isoform e [Homo sapiens] 558 e-159
gi|193083112 poly(rC) binding protein 2 isoform f [Homo sapiens] 541 e-154
gi|148833484 poly(rC) binding protein 2 isoform c [Homo sapiens] 531 e-151
gi|193083114 poly(rC) binding protein 2 isoform g [Homo sapiens] 495 e-140
gi|194306631 poly(rC) binding protein 3 isoform 1 [Homo sapiens] 423 e-118
gi|194306633 poly(rC) binding protein 3 isoform 2 [Homo sapiens] 390 e-108
gi|14670373 poly(rC) binding protein 4 isoform c [Homo sapiens] 325 4e-89
gi|14670369 poly(rC) binding protein 4 isoform c [Homo sapiens] 325 4e-89
gi|9966803 poly(rC) binding protein 4 isoform a [Homo sapiens] 238 6e-63
gi|14165435 heterogeneous nuclear ribonucleoprotein K isoform b ... 139 5e-33
gi|14165439 heterogeneous nuclear ribonucleoprotein K isoform a ... 138 9e-33
gi|14165437 heterogeneous nuclear ribonucleoprotein K isoform a ... 138 9e-33
gi|56549653 neuro-oncological ventral antigen 1 isoform 1 [Homo ... 82 7e-16
gi|56549651 neuro-oncological ventral antigen 1 isoform 2 [Homo ... 82 7e-16
gi|154355000 KH-type splicing regulatory protein [Homo sapiens] 82 7e-16
gi|100816392 far upstream element (FUSE) binding protein 3 [Homo... 82 1e-15
gi|64085377 insulin-like growth factor 2 mRNA binding protein 2 ... 79 6e-15
gi|56118219 insulin-like growth factor 2 mRNA binding protein 2 ... 76 4e-14
gi|17402900 far upstream element-binding protein [Homo sapiens] 76 5e-14
gi|5902724 neuro-oncological ventral antigen 2 [Homo sapiens] 75 9e-14
gi|56237027 insulin-like growth factor 2 mRNA binding protein 1 ... 73 3e-13
gi|30795212 insulin-like growth factor 2 mRNA binding protein 3 ... 72 8e-13
gi|238624257 insulin-like growth factor 2 mRNA binding protein 1... 71 1e-12
gi|145312259 tudor and KH domain containing isoform a [Homo sapi... 57 3e-08
gi|145312270 tudor and KH domain containing isoform a [Homo sapi... 57 3e-08
gi|145312256 tudor and KH domain containing isoform a [Homo sapi... 57 3e-08
>gi|222352151 poly(rC) binding protein 1 [Homo sapiens]
Length = 356
Score = 702 bits (1813), Expect = 0.0
Identities = 356/356 (100%), Positives = 356/356 (100%)
Query: 1 MDAGVTESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIIT 60
MDAGVTESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIIT
Sbjct: 1 MDAGVTESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIIT 60
Query: 61 LTGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKI 120
LTGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKI
Sbjct: 61 LTGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKI 120
Query: 121 KEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMT 180
KEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMT
Sbjct: 121 KEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMT 180
Query: 181 IPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKLNQ 240
IPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKLNQ
Sbjct: 181 IPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKLNQ 240
Query: 241 VARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGA 300
VARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGA
Sbjct: 241 VARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGA 300
Query: 301 NINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINARLSSEKGMGCS 356
NINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINARLSSEKGMGCS
Sbjct: 301 NINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINARLSSEKGMGCS 356
>gi|14141168 poly(rC) binding protein 2 isoform a [Homo sapiens]
Length = 366
Score = 575 bits (1483), Expect = e-164
Identities = 304/367 (82%), Positives = 326/367 (88%), Gaps = 12/367 (3%)
Query: 1 MDAGVTESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIIT 60
MD GV E GLNVTLTIRLLMHGKEVGSIIGKKGESVK++REESGARINISEGNCPERIIT
Sbjct: 1 MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIIT 60
Query: 61 LTGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKI 120
L GPTNAIFKAFAMIIDKLEEDI+SSMTNSTAASRPPVTLRLVVPA+QCGSLIGKGGCKI
Sbjct: 61 LAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKI 120
Query: 121 KEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMT 180
KEIRESTGAQVQVAGDMLPNSTERAITIAG+PQS+ ECVKQIC+VMLETLSQSP + +T
Sbjct: 121 KEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPP-KGVT 179
Query: 181 IPYQPMPASSPVICAGGQDRC---SDAAGYPHAT------HDLEGPPLDAYSIQGQHTIS 231
IPY+P P+SSPVI AGGQDR SD+A +PH T DLEGPPL+AY+IQGQ+ I
Sbjct: 180 IPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIP 239
Query: 232 PLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTT-HELTIPNNL 290
DL KL+Q+A QQSHF M HG TGF+GI+SSSPEVKGYWA LDAS QTT HELTIPN+L
Sbjct: 240 QPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDL 299
Query: 291 IGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINARLSSE 350
IGCIIGRQGA INEIRQMSGAQIKIANPVEGS+ RQVTITGSAASISLAQYLIN RLSSE
Sbjct: 300 IGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRLSSE 359
Query: 351 K-GMGCS 356
GMG S
Sbjct: 360 TGGMGSS 366
>gi|193083108 poly(rC) binding protein 2 isoform d [Homo sapiens]
Length = 365
Score = 569 bits (1467), Expect = e-162
Identities = 303/367 (82%), Positives = 325/367 (88%), Gaps = 13/367 (3%)
Query: 1 MDAGVTESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIIT 60
MD GV E GLNVTLTIRLLMHGKEVGSIIGKKGESVK++REESGARINISEGNCPERIIT
Sbjct: 1 MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIIT 60
Query: 61 LTGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKI 120
L GPTNAIFKAFAMIIDKLEEDI+SSMTNSTAASRPPVTLRLVVPA+QCGSLIGKGGCKI
Sbjct: 61 LAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKI 120
Query: 121 KEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMT 180
KEIRESTGAQVQVAGDMLPNSTERAITIAG+PQS+ ECVKQIC+VMLETLSQSP + +T
Sbjct: 121 KEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPP-KGVT 179
Query: 181 IPYQPMPASSPVICAGGQDRC---SDAAGYPHAT------HDLEGPPLDAYSIQGQHTIS 231
IPY+P P+SSPVI AGGQDR SD+A +PH T DLEGPPL+AY+IQGQ+ I
Sbjct: 180 IPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIP 239
Query: 232 PLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTT-HELTIPNNL 290
DL KL+Q+A QQSHF M HG TGF+GI+SSSPEVKGYW LDAS QTT HELTIPN+L
Sbjct: 240 QPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYW-GLDASAQTTSHELTIPNDL 298
Query: 291 IGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINARLSSE 350
IGCIIGRQGA INEIRQMSGAQIKIANPVEGS+ RQVTITGSAASISLAQYLIN RLSSE
Sbjct: 299 IGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRLSSE 358
Query: 351 K-GMGCS 356
GMG S
Sbjct: 359 TGGMGSS 365
>gi|14141166 poly(rC) binding protein 2 isoform b [Homo sapiens]
Length = 362
Score = 565 bits (1455), Expect = e-161
Identities = 300/367 (81%), Positives = 323/367 (88%), Gaps = 16/367 (4%)
Query: 1 MDAGVTESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIIT 60
MD GV E GLNVTLTIRLLMHGKEVGSIIGKKGESVK++REESGARINISEGNCPERIIT
Sbjct: 1 MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIIT 60
Query: 61 LTGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKI 120
L GPTNAIFKAFAMIIDKLEEDI+SSMTNSTAASRPPVTLRLVVPA+QCGSLIGKGGCKI
Sbjct: 61 LAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKI 120
Query: 121 KEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMT 180
KEIRESTGAQVQVAGDMLPNSTERAITIAG+PQS+ ECVKQIC+VMLE+ P+G +T
Sbjct: 121 KEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLES---PPKG--VT 175
Query: 181 IPYQPMPASSPVICAGGQDRC---SDAAGYPHAT------HDLEGPPLDAYSIQGQHTIS 231
IPY+P P+SSPVI AGGQDR SD+A +PH T DLEGPPL+AY+IQGQ+ I
Sbjct: 176 IPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIP 235
Query: 232 PLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTT-HELTIPNNL 290
DL KL+Q+A QQSHF M HG TGF+GI+SSSPEVKGYWA LDAS QTT HELTIPN+L
Sbjct: 236 QPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDL 295
Query: 291 IGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINARLSSE 350
IGCIIGRQGA INEIRQMSGAQIKIANPVEGS+ RQVTITGSAASISLAQYLIN RLSSE
Sbjct: 296 IGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRLSSE 355
Query: 351 K-GMGCS 356
GMG S
Sbjct: 356 TGGMGSS 362
>gi|193083110 poly(rC) binding protein 2 isoform e [Homo sapiens]
Length = 361
Score = 558 bits (1439), Expect = e-159
Identities = 299/367 (81%), Positives = 322/367 (87%), Gaps = 17/367 (4%)
Query: 1 MDAGVTESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIIT 60
MD GV E GLNVTLTIRLLMHGKEVGSIIGKKGESVK++REESGARINISEGNCPERIIT
Sbjct: 1 MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIIT 60
Query: 61 LTGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKI 120
L GPTNAIFKAFAMIIDKLEEDI+SSMTNSTAASRPPVTLRLVVPA+QCGSLIGKGGCKI
Sbjct: 61 LAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKI 120
Query: 121 KEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMT 180
KEIRESTGAQVQVAGDMLPNSTERAITIAG+PQS+ ECVKQIC+VMLE+ P+G +T
Sbjct: 121 KEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLES---PPKG--VT 175
Query: 181 IPYQPMPASSPVICAGGQDRC---SDAAGYPHAT------HDLEGPPLDAYSIQGQHTIS 231
IPY+P P+SSPVI AGGQDR SD+A +PH T DLEGPPL+AY+IQGQ+ I
Sbjct: 176 IPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIP 235
Query: 232 PLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTT-HELTIPNNL 290
DL KL+Q+A QQSHF M HG TGF+GI+SSSPEVKGYW LDAS QTT HELTIPN+L
Sbjct: 236 QPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYW-GLDASAQTTSHELTIPNDL 294
Query: 291 IGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINARLSSE 350
IGCIIGRQGA INEIRQMSGAQIKIANPVEGS+ RQVTITGSAASISLAQYLIN RLSSE
Sbjct: 295 IGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRLSSE 354
Query: 351 K-GMGCS 356
GMG S
Sbjct: 355 TGGMGSS 361
>gi|193083112 poly(rC) binding protein 2 isoform f [Homo sapiens]
Length = 335
Score = 541 bits (1395), Expect = e-154
Identities = 289/358 (80%), Positives = 308/358 (86%), Gaps = 25/358 (6%)
Query: 1 MDAGVTESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIIT 60
MD GV E GLNVTLTIRLLMHGKEVGSIIGKKGESVK++REESGARINISEGNCPERIIT
Sbjct: 1 MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIIT 60
Query: 61 LTGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKI 120
L GPTNAIFKAFAMIIDKLEEDI+SSMTNSTAASRPPVTLRLVVPA+QCGSLIGKGGCKI
Sbjct: 61 LAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKI 120
Query: 121 KEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMT 180
KEIRESTGAQVQVAGDMLPNSTERAITIAG+PQS+ ECVKQIC+VMLETLSQSP + +T
Sbjct: 121 KEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPP-KGVT 179
Query: 181 IPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKLNQ 240
IPY+P P+SSPVI AGGQ AY+IQGQ+ I DL KL+Q
Sbjct: 180 IPYRPKPSSSPVIFAGGQ----------------------AYTIQGQYAIPQPDLTKLHQ 217
Query: 241 VARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTT-HELTIPNNLIGCIIGRQG 299
+A QQSHF M HG TGF+GI+SSSPEVKGYWA LDAS QTT HELTIPN+LIGCIIGRQG
Sbjct: 218 LAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQG 277
Query: 300 ANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINARLSSEK-GMGCS 356
A INEIRQMSGAQIKIANPVEGS+ RQVTITGSAASISLAQYLIN RLSSE GMG S
Sbjct: 278 AKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRLSSETGGMGSS 335
>gi|148833484 poly(rC) binding protein 2 isoform c [Homo sapiens]
Length = 331
Score = 531 bits (1367), Expect = e-151
Identities = 285/358 (79%), Positives = 305/358 (85%), Gaps = 29/358 (8%)
Query: 1 MDAGVTESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIIT 60
MD GV E GLNVTLTIRLLMHGKEVGSIIGKKGESVK++REESGARINISEGNCPERIIT
Sbjct: 1 MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIIT 60
Query: 61 LTGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKI 120
L GPTNAIFKAFAMIIDKLEEDI+SSMTNSTAASRPPVTLRLVVPA+QCGSLIGKGGCKI
Sbjct: 61 LAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKI 120
Query: 121 KEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMT 180
KEIRESTGAQVQVAGDMLPNSTERAITIAG+PQS+ ECVKQIC+VMLE+ P+G +T
Sbjct: 121 KEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLES---PPKG--VT 175
Query: 181 IPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKLNQ 240
IPY+P P+SSPVI AGGQ AY+IQGQ+ I DL KL+Q
Sbjct: 176 IPYRPKPSSSPVIFAGGQ----------------------AYTIQGQYAIPQPDLTKLHQ 213
Query: 241 VARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTT-HELTIPNNLIGCIIGRQG 299
+A QQSHF M HG TGF+GI+SSSPEVKGYWA LDAS QTT HELTIPN+LIGCIIGRQG
Sbjct: 214 LAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQG 273
Query: 300 ANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINARLSSEK-GMGCS 356
A INEIRQMSGAQIKIANPVEGS+ RQVTITGSAASISLAQYLIN RLSSE GMG S
Sbjct: 274 AKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRLSSETGGMGSS 331
>gi|193083114 poly(rC) binding protein 2 isoform g [Homo sapiens]
Length = 318
Score = 495 bits (1274), Expect = e-140
Identities = 273/358 (76%), Positives = 292/358 (81%), Gaps = 42/358 (11%)
Query: 1 MDAGVTESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIIT 60
MD GV E GLNVTLTIRLLMHGKEVGSIIGKKGESVK++REESGARINISEGNCPERIIT
Sbjct: 1 MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIIT 60
Query: 61 LTGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKI 120
L GPTNAIFKAFAMIIDKLEEDI+SSMTNSTAASRPPVTLRLVVPA+QCGSLIGKGGCKI
Sbjct: 61 LAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKI 120
Query: 121 KEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMT 180
KEIRESTGAQVQVAGDMLPNSTERAITIAG+PQS+ ECVKQIC+VMLE+ P+G +T
Sbjct: 121 KEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLES---PPKG--VT 175
Query: 181 IPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKLNQ 240
IPY+P P+SSPVI AGGQ AY+IQGQ+ I DL KL+Q
Sbjct: 176 IPYRPKPSSSPVIFAGGQ----------------------AYTIQGQYAIPQPDLTKLHQ 213
Query: 241 VARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTT-HELTIPNNLIGCIIGRQG 299
+A QQSHF M HG TGF+ A LDAS QTT HELTIPN+LIGCIIGRQG
Sbjct: 214 LAMQQSHFPMTHGNTGFS-------------AGLDASAQTTSHELTIPNDLIGCIIGRQG 260
Query: 300 ANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINARLSSEK-GMGCS 356
A INEIRQMSGAQIKIANPVEGS+ RQVTITGSAASISLAQYLIN RLSSE GMG S
Sbjct: 261 AKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRLSSETGGMGSS 318
>gi|194306631 poly(rC) binding protein 3 isoform 1 [Homo sapiens]
Length = 371
Score = 423 bits (1088), Expect = e-118
Identities = 239/364 (65%), Positives = 277/364 (76%), Gaps = 37/364 (10%)
Query: 1 MDAGVTESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIIT 60
M++ V+E GLNVTLTIRLLMHGKEVGSIIGKKGE+VK++REESGARINISEGNCPERI+T
Sbjct: 33 MESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVT 92
Query: 61 LTGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKI 120
+TGPT+AIFKAFAMI K EEDI +SM+NS A S+PPVTLRLVVPA+QCGSLIGKGG KI
Sbjct: 93 ITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKI 152
Query: 121 KEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMT 180
KEIRESTGAQVQVAGDMLPNSTERA+TI+G P ++ +CVKQIC+VMLE+ P+G T
Sbjct: 153 KEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLES---PPKG--AT 207
Query: 181 IPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTI-SPLDLAKLN 239
IPY+P PAS+PVI AGGQ AY+IQGQ+ I P L KL+
Sbjct: 208 IPYRPKPASTPVIFAGGQ----------------------AYTIQGQYAIPHPDQLTKLH 245
Query: 240 QVARQQSHFAMM-HGGTGFAG------IDSSSPEVKGYWASLDAS-TQTTHELTIPNNLI 291
Q+A QQ+ F + F G + + G + LDAS +THELTIPN+LI
Sbjct: 246 QLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLI 305
Query: 292 GCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINARLSSE- 350
GCIIGRQG INEIRQMSGAQIKIAN EGSS RQ+TITG+ A+ISLAQYLINARL+SE
Sbjct: 306 GCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARLTSEV 365
Query: 351 KGMG 354
GMG
Sbjct: 366 TGMG 369
>gi|194306633 poly(rC) binding protein 3 isoform 2 [Homo sapiens]
Length = 345
Score = 390 bits (1002), Expect = e-108
Identities = 222/363 (61%), Positives = 256/363 (70%), Gaps = 61/363 (16%)
Query: 1 MDAGVTESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIIT 60
M++ V+E GLNVTLTIRLLMHGKEVGSIIGKKGE+VK++REESGARINISEGNCPERI+T
Sbjct: 33 MESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVT 92
Query: 61 LTGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKI 120
+TGPT+AIFKAFAMI K EEDI +SM+NS A S+PPVTLRLVVPA+QCGSLIGKGG KI
Sbjct: 93 ITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKI 152
Query: 121 KEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMT 180
KEIRESTGAQVQVAGDMLPNSTERA+TI+G P ++ +CVKQIC+VMLE
Sbjct: 153 KEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLE------------ 200
Query: 181 IPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKLNQ 240
AY+IQGQ+ I DL KL+Q
Sbjct: 201 ----------------------------------------AYTIQGQYAIPHPDLTKLHQ 220
Query: 241 VARQQSHFAMM-HGGTGFAG------IDSSSPEVKGYWASLDAS-TQTTHELTIPNNLIG 292
+A QQ+ F + F G + + G + LDAS +THELTIPN+LIG
Sbjct: 221 LAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIG 280
Query: 293 CIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINARLSSE-K 351
CIIGRQG INEIRQMSGAQIKIAN EGSS RQ+TITG+ A+ISLAQYLINARL+SE
Sbjct: 281 CIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARLTSEVT 340
Query: 352 GMG 354
GMG
Sbjct: 341 GMG 343
Score = 37.7 bits (86), Expect = 0.016
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Query: 25 VGSIIGKKGESVKRIREESGARI---NISEGNCPERIITLTGPTNAIFKAFAMIIDKLEE 81
+G IIG++G + IR+ SGA+I N +EG+ ER IT+TG I A +I +L
Sbjct: 279 IGCIIGRQGTKINEIRQMSGAQIKIANATEGS-SERQITITGTPANISLAQYLINARLTS 337
Query: 82 DINSSMT 88
++ T
Sbjct: 338 EVTGMGT 344
>gi|14670373 poly(rC) binding protein 4 isoform c [Homo sapiens]
Length = 403
Score = 325 bits (833), Expect = 4e-89
Identities = 186/353 (52%), Positives = 236/353 (66%), Gaps = 47/353 (13%)
Query: 2 DAGVTESG-LNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIIT 60
D G+ E L++TLT+R+LMHGKEVGSIIGKKGE+VKRIRE+S ARI ISEG+CPERI T
Sbjct: 5 DGGLEEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITT 64
Query: 61 LTGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKI 120
+TG T A+F A +MI KL+ED+ ++ N SRPPVTLRLV+PA+QCGSLIGK G KI
Sbjct: 65 ITGSTAAVFHAVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKI 124
Query: 121 KEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMT 180
KEIRE+TGAQVQVAGD+LPNSTERA+T++GVP ++ CV+QIC V+LE+ P+G T
Sbjct: 125 KEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQICAVILES---PPKG--AT 179
Query: 181 IPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQH-TISPLDLAKLN 239
IPY P + V+ + Q +S+QGQ+ ++P ++ KL
Sbjct: 180 IPYHPSLSLGTVLLSANQ----------------------GFSVQGQYGAVTPAEVTKLQ 217
Query: 240 QVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQT-THELTIPNNLIGCIIGRQ 298
Q++ FA +P V LD TQT + E +PN+LIGC+IGRQ
Sbjct: 218 QLSSHAVPFA--------------TPSVV---PGLDPGTQTSSQEFLVPNDLIGCVIGRQ 260
Query: 299 GANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINARLSSEK 351
G+ I+EIRQMSGA IKI N EG+ R VTITGS SI+LAQYLI A L + K
Sbjct: 261 GSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYLITACLETAK 313
>gi|14670369 poly(rC) binding protein 4 isoform c [Homo sapiens]
Length = 403
Score = 325 bits (833), Expect = 4e-89
Identities = 186/353 (52%), Positives = 236/353 (66%), Gaps = 47/353 (13%)
Query: 2 DAGVTESG-LNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIIT 60
D G+ E L++TLT+R+LMHGKEVGSIIGKKGE+VKRIRE+S ARI ISEG+CPERI T
Sbjct: 5 DGGLEEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITT 64
Query: 61 LTGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKI 120
+TG T A+F A +MI KL+ED+ ++ N SRPPVTLRLV+PA+QCGSLIGK G KI
Sbjct: 65 ITGSTAAVFHAVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKI 124
Query: 121 KEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMT 180
KEIRE+TGAQVQVAGD+LPNSTERA+T++GVP ++ CV+QIC V+LE+ P+G T
Sbjct: 125 KEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQICAVILES---PPKG--AT 179
Query: 181 IPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQH-TISPLDLAKLN 239
IPY P + V+ + Q +S+QGQ+ ++P ++ KL
Sbjct: 180 IPYHPSLSLGTVLLSANQ----------------------GFSVQGQYGAVTPAEVTKLQ 217
Query: 240 QVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQT-THELTIPNNLIGCIIGRQ 298
Q++ FA +P V LD TQT + E +PN+LIGC+IGRQ
Sbjct: 218 QLSSHAVPFA--------------TPSVV---PGLDPGTQTSSQEFLVPNDLIGCVIGRQ 260
Query: 299 GANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINARLSSEK 351
G+ I+EIRQMSGA IKI N EG+ R VTITGS SI+LAQYLI A L + K
Sbjct: 261 GSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYLITACLETAK 313
>gi|9966803 poly(rC) binding protein 4 isoform a [Homo sapiens]
Length = 424
Score = 238 bits (607), Expect = 6e-63
Identities = 154/367 (41%), Positives = 200/367 (54%), Gaps = 101/367 (27%)
Query: 42 ESGARINISEGNCPERIITLTGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLR 101
+S ARI ISEG+CPERI T+TG T A+F A +MI KL+ED+ ++ N SRPPVTLR
Sbjct: 12 QSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKLDEDLCAAPANGGNVSRPPVTLR 71
Query: 102 LVVPATQCGSLIGKGGCKIK---EIR---------------------------------- 124
LV+PA+QCGSLIGK G KIK E+R
Sbjct: 72 LVIPASQCGSLIGKAGTKIKEIREVRGEIYHPQGIRGKGAVVRGVLGLWRPPHLESSEPG 131
Query: 125 ------------------ESTGAQVQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVM 166
++TGAQVQVAGD+LPNSTERA+T++GVP ++ CV+QIC V+
Sbjct: 132 QPFSGLWEQPEVAPVLCLQTTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQICAVI 191
Query: 167 LETLSQSPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQG 226
LE+ P+G TIPY P + V+ + Q +S+QG
Sbjct: 192 LES---PPKGA--TIPYHPSLSLGTVLLSANQ----------------------GFSVQG 224
Query: 227 QH-TISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTT-HEL 284
Q+ ++P ++ KL Q++ FA +P V LD TQT+ E
Sbjct: 225 QYGAVTPAEVTKLQQLSSHAVPFA--------------TPSVV---PGLDPGTQTSSQEF 267
Query: 285 TIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLIN 344
+PN+LIGC+IGRQG+ I+EIRQMSGA IKI N EG+ R VTITGS SI+LAQYLI
Sbjct: 268 LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYLIT 327
Query: 345 ARLSSEK 351
A L + K
Sbjct: 328 ACLETAK 334
Score = 47.4 bits (111), Expect = 2e-05
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 103 VVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTECVKQI 162
+VP G +IG+ G KI EIR+ +GA +++ G+ + ER +TI G P S+ + +
Sbjct: 268 LVPNDLIGCVIGRQGSKISEIRQMSGAHIKI-GNQAEGAGERHVTITGSPVSIA-LAQYL 325
Query: 163 CLVMLETLSQSPQGRVMTIPYQ-PMPASSPV 192
LET + G + P P P S P+
Sbjct: 326 ITACLETAKSTSGGTPSSAPADLPAPFSPPL 356
Score = 36.6 bits (83), Expect = 0.035
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 25 VGSIIGKKGESVKRIREESGARINI---SEGNCPERIITLTGPTNAIFKAFAMIIDKLEE 81
+G +IG++G + IR+ SGA I I +EG ER +T+TG +I A +I LE
Sbjct: 274 IGCVIGRQGSKISEIRQMSGAHIKIGNQAEG-AGERHVTITGSPVSIALAQYLITACLE- 331
Query: 82 DINSSMTNSTAASRP 96
S + T +S P
Sbjct: 332 -TAKSTSGGTPSSAP 345
>gi|14165435 heterogeneous nuclear ribonucleoprotein K isoform b
[Homo sapiens]
Length = 463
Score = 139 bits (349), Expect = 5e-33
Identities = 121/425 (28%), Positives = 187/425 (44%), Gaps = 97/425 (22%)
Query: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKAFAMI 75
+R+L+ K G++IGK G+++K +R + A +++ + + PERI++++ I + I
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKI 104
Query: 76 IDKLEEDINSSMTNSTAASRPPVT--------------------LRLVVPATQCGSLIGK 115
I LEE + + + TA S+ P+ LRL++ + G +IG
Sbjct: 105 IPTLEEGLQ--LPSPTATSQLPLESDAVECLNYQHYKGSDFDCELRLLIHQSLAGGIIGV 162
Query: 116 GGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSP- 174
G KIKE+RE+T +++ + P+ST+R + I G P V EC+K ++L+ +S+SP
Sbjct: 163 KGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIK----IILDLISESPI 218
Query: 175 QGRVMTIPYQP---------------------MPASSPVICAGGQDRCSDAAG---YPHA 210
+GR PY P P P+ GG DR G P +
Sbjct: 219 KGRAQ--PYDPNFYDETYDYGGFTMMFDDRRGRPVGFPMRGRGGFDRMPPGRGGRPMPPS 276
Query: 211 THDLE------GPPLDAYSIQGQHTIS----PL---------DLAKLNQVARQQSHFAMM 251
D + GPP G+ PL DL ++ R + M
Sbjct: 277 RRDYDDMSPRRGPPPPPPGRGGRGGSRARNLPLPPPPPPRGGDLMAYDRRGRPGDRYDGM 336
Query: 252 HG----GTGFAGIDSSSPEV--------------------KGYWASLDASTQTTHELTIP 287
G T + ID+ SP +G + L TT ++TIP
Sbjct: 337 VGFSADETWDSAIDTWSPSEWQMAYEPQGGSGYDYSYAGGRGSYGDLGGPIITT-QVTIP 395
Query: 288 NNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINARL 347
+L G IIG+ G I +IR SGA IKI P+EGS R +TITG+ I AQYL+ +
Sbjct: 396 KDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSV 455
Query: 348 SSEKG 352
G
Sbjct: 456 KQYSG 460
Score = 45.1 bits (105), Expect = 1e-04
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 9 GLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCP---ERIITLTGPT 65
G + +RLL+H G IIG KG +K +RE + I + + CP +R++ + G
Sbjct: 140 GSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKP 199
Query: 66 NAIFKAFAMIIDKLEE 81
+ + + +I+D + E
Sbjct: 200 DRVVECIKIILDLISE 215
Score = 38.9 bits (89), Expect = 0.007
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 98 VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTE 157
V LR+++ + G++IGKGG IK +R A V V P ER ++I+ +++ E
Sbjct: 43 VELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGP---ERILSISADIETIGE 99
Query: 158 CVKQICLVMLETL 170
+K+I + E L
Sbjct: 100 ILKKIIPTLEEGL 112
>gi|14165439 heterogeneous nuclear ribonucleoprotein K isoform a
[Homo sapiens]
Length = 464
Score = 138 bits (347), Expect = 9e-33
Identities = 120/416 (28%), Positives = 185/416 (44%), Gaps = 97/416 (23%)
Query: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKAFAMI 75
+R+L+ K G++IGK G+++K +R + A +++ + + PERI++++ I + I
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKI 104
Query: 76 IDKLEEDINSSMTNSTAASRPPVT--------------------LRLVVPATQCGSLIGK 115
I LEE + + + TA S+ P+ LRL++ + G +IG
Sbjct: 105 IPTLEEGLQ--LPSPTATSQLPLESDAVECLNYQHYKGSDFDCELRLLIHQSLAGGIIGV 162
Query: 116 GGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSP- 174
G KIKE+RE+T +++ + P+ST+R + I G P V EC+K ++L+ +S+SP
Sbjct: 163 KGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIK----IILDLISESPI 218
Query: 175 QGRVMTIPYQP---------------------MPASSPVICAGGQDRCSDAAG---YPHA 210
+GR PY P P P+ GG DR G P +
Sbjct: 219 KGRAQ--PYDPNFYDETYDYGGFTMMFDDRRGRPVGFPMRGRGGFDRMPPGRGGRPMPPS 276
Query: 211 THDLE------GPPLDAYSIQGQHTIS----PL---------DLAKLNQVARQQSHFAMM 251
D + GPP G+ PL DL ++ R + M
Sbjct: 277 RRDYDDMSPRRGPPPPPPGRGGRGGSRARNLPLPPPPPPRGGDLMAYDRRGRPGDRYDGM 336
Query: 252 HG----GTGFAGIDSSSPEV--------------------KGYWASLDASTQTTHELTIP 287
G T + ID+ SP +G + L TT ++TIP
Sbjct: 337 VGFSADETWDSAIDTWSPSEWQMAYEPQGGSGYDYSYAGGRGSYGDLGGPIITT-QVTIP 395
Query: 288 NNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLI 343
+L G IIG+ G I +IR SGA IKI P+EGS R +TITG+ I AQYL+
Sbjct: 396 KDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLL 451
Score = 45.1 bits (105), Expect = 1e-04
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 9 GLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCP---ERIITLTGPT 65
G + +RLL+H G IIG KG +K +RE + I + + CP +R++ + G
Sbjct: 140 GSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKP 199
Query: 66 NAIFKAFAMIIDKLEE 81
+ + + +I+D + E
Sbjct: 200 DRVVECIKIILDLISE 215
Score = 44.3 bits (103), Expect = 2e-04
Identities = 25/58 (43%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Query: 26 GSIIGKKGESVKRIREESGARINISE--GNCPERIITLTGPTNAIFKAFAMIIDKLEE 81
GSIIGK G+ +K+IR ESGA I I E +RIIT+TG + I A ++ + +++
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQ 457
Score = 38.9 bits (89), Expect = 0.007
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 98 VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTE 157
V LR+++ + G++IGKGG IK +R A V V P ER ++I+ +++ E
Sbjct: 43 VELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGP---ERILSISADIETIGE 99
Query: 158 CVKQICLVMLETL 170
+K+I + E L
Sbjct: 100 ILKKIIPTLEEGL 112
>gi|14165437 heterogeneous nuclear ribonucleoprotein K isoform a
[Homo sapiens]
Length = 464
Score = 138 bits (347), Expect = 9e-33
Identities = 120/416 (28%), Positives = 185/416 (44%), Gaps = 97/416 (23%)
Query: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKAFAMI 75
+R+L+ K G++IGK G+++K +R + A +++ + + PERI++++ I + I
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGEILKKI 104
Query: 76 IDKLEEDINSSMTNSTAASRPPVT--------------------LRLVVPATQCGSLIGK 115
I LEE + + + TA S+ P+ LRL++ + G +IG
Sbjct: 105 IPTLEEGLQ--LPSPTATSQLPLESDAVECLNYQHYKGSDFDCELRLLIHQSLAGGIIGV 162
Query: 116 GGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSP- 174
G KIKE+RE+T +++ + P+ST+R + I G P V EC+K ++L+ +S+SP
Sbjct: 163 KGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIK----IILDLISESPI 218
Query: 175 QGRVMTIPYQP---------------------MPASSPVICAGGQDRCSDAAG---YPHA 210
+GR PY P P P+ GG DR G P +
Sbjct: 219 KGRAQ--PYDPNFYDETYDYGGFTMMFDDRRGRPVGFPMRGRGGFDRMPPGRGGRPMPPS 276
Query: 211 THDLE------GPPLDAYSIQGQHTIS----PL---------DLAKLNQVARQQSHFAMM 251
D + GPP G+ PL DL ++ R + M
Sbjct: 277 RRDYDDMSPRRGPPPPPPGRGGRGGSRARNLPLPPPPPPRGGDLMAYDRRGRPGDRYDGM 336
Query: 252 HG----GTGFAGIDSSSPEV--------------------KGYWASLDASTQTTHELTIP 287
G T + ID+ SP +G + L TT ++TIP
Sbjct: 337 VGFSADETWDSAIDTWSPSEWQMAYEPQGGSGYDYSYAGGRGSYGDLGGPIITT-QVTIP 395
Query: 288 NNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLI 343
+L G IIG+ G I +IR SGA IKI P+EGS R +TITG+ I AQYL+
Sbjct: 396 KDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLL 451
Score = 45.1 bits (105), Expect = 1e-04
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 9 GLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCP---ERIITLTGPT 65
G + +RLL+H G IIG KG +K +RE + I + + CP +R++ + G
Sbjct: 140 GSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKP 199
Query: 66 NAIFKAFAMIIDKLEE 81
+ + + +I+D + E
Sbjct: 200 DRVVECIKIILDLISE 215
Score = 44.3 bits (103), Expect = 2e-04
Identities = 25/58 (43%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Query: 26 GSIIGKKGESVKRIREESGARINISE--GNCPERIITLTGPTNAIFKAFAMIIDKLEE 81
GSIIGK G+ +K+IR ESGA I I E +RIIT+TG + I A ++ + +++
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQ 457
Score = 38.9 bits (89), Expect = 0.007
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 98 VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTE 157
V LR+++ + G++IGKGG IK +R A V V P ER ++I+ +++ E
Sbjct: 43 VELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGP---ERILSISADIETIGE 99
Query: 158 CVKQICLVMLETL 170
+K+I + E L
Sbjct: 100 ILKKIIPTLEEGL 112
>gi|56549653 neuro-oncological ventral antigen 1 isoform 1 [Homo
sapiens]
Length = 507
Score = 82.0 bits (201), Expect = 7e-16
Identities = 87/360 (24%), Positives = 147/360 (40%), Gaps = 57/360 (15%)
Query: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG----NCPERIITLTGPTNAIFKA 71
+++++ G IIGK G +VK + E+SGA + +S+ N ER++T++G KA
Sbjct: 174 VKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKA 233
Query: 72 FAMIIDKLEE-------------DINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGC 118
+II K++E ++ + NS P V+P + + G
Sbjct: 234 VELIIQKIQEDPQSGSCLNISYANVTGPVANSNPTGSPYANTAEVLPTAAAAAGL-LGHA 292
Query: 119 KIKEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRV 178
+ + G+ L T T+A + L TL
Sbjct: 293 NLAGVAAFPAVLSGFTGNDLVAITSALNTLASYGYN------------LNTLG------- 333
Query: 179 MTIPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKL 238
+ A+ + A + AA AT+ E S G L
Sbjct: 334 --LGLSQAAATGALAAAAASANPAAAAANLLATYASEA------SASGSTAGGTAGTFAL 385
Query: 239 NQVARQQSHFAMMHGGTGFAGIDS--SSPEVKGYWASLDASTQTTHELTIPNNLIGCIIG 296
+A A G+ G S ++ + G S D S E+ +P NL+G I+G
Sbjct: 386 GSLA------AATAATNGYFGAASPLAASAILGTEKSTDGSKDVV-EIAVPENLVGAILG 438
Query: 297 RQGANINEIRQMSGAQIKIANP---VEGSSGRQVTITGSAASISLAQYLINARLSSEKGM 353
+ G + E ++++GA+I+I+ V G+ R+VTITG+ A+ AQYLI R++ E+G+
Sbjct: 439 KGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQAAQYLITQRITYEQGV 498
Score = 70.9 bits (172), Expect = 2e-12
Identities = 57/231 (24%), Positives = 110/231 (47%), Gaps = 50/231 (21%)
Query: 6 TESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGN-----CPERIIT 60
T +G + +++L+ GSIIGK G+++ ++++E+GA I +S+ ER+
Sbjct: 42 TNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCL 101
Query: 61 LTGPTNAIFKAFAMIIDKLEE---------------------------DINSSMTNSTAA 93
+ G A+ I +K+ E + SS T + ++
Sbjct: 102 IQGTVEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSS 161
Query: 94 SRPPVT------LRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVA--GDMLPNSTERA 145
P+T ++++VP + G +IGKGG +K + E +GA VQ++ D + N ER
Sbjct: 162 PSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGI-NLQERV 220
Query: 146 ITIAGVPQSVTECVKQICLVMLETLSQSPQ-GRVMTIPYQ----PMPASSP 191
+T++G P+ + V+ ++++ + + PQ G + I Y P+ S+P
Sbjct: 221 VTVSGEPEQNRKAVE----LIIQKIQEDPQSGSCLNISYANVTGPVANSNP 267
Score = 57.0 bits (136), Expect = 3e-08
Identities = 56/259 (21%), Positives = 102/259 (39%), Gaps = 66/259 (25%)
Query: 100 LRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAG--DMLPNSTERAITIAGVPQSVTE 157
L++++P+ GS+IGKGG I ++++ TGA ++++ D P +TER I G E
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGT----VE 107
Query: 158 CVKQICLVMLETLSQSPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGP 217
+ + + E + + PQ T P + + V DR P + +
Sbjct: 108 ALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTV----NPDRIKQTL--PSSPTTTKSS 161
Query: 218 PLDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDAS 277
P D P+ ++ NQV
Sbjct: 162 PSD-----------PMTTSRANQV------------------------------------ 174
Query: 278 TQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSS--GRQVTITGSAAS 335
++ +PN+ G IIG+ GA + + + SGA ++++ +G + R VT++G
Sbjct: 175 -----KIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQ 229
Query: 336 ISLAQYLINARLSSEKGMG 354
A LI ++ + G
Sbjct: 230 NRKAVELIIQKIQEDPQSG 248
>gi|56549651 neuro-oncological ventral antigen 1 isoform 2 [Homo
sapiens]
Length = 483
Score = 82.0 bits (201), Expect = 7e-16
Identities = 87/360 (24%), Positives = 147/360 (40%), Gaps = 57/360 (15%)
Query: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG----NCPERIITLTGPTNAIFKA 71
+++++ G IIGK G +VK + E+SGA + +S+ N ER++T++G KA
Sbjct: 150 VKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKA 209
Query: 72 FAMIIDKLEE-------------DINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGC 118
+II K++E ++ + NS P V+P + + G
Sbjct: 210 VELIIQKIQEDPQSGSCLNISYANVTGPVANSNPTGSPYANTAEVLPTAAAAAGL-LGHA 268
Query: 119 KIKEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRV 178
+ + G+ L T T+A + L TL
Sbjct: 269 NLAGVAAFPAVLSGFTGNDLVAITSALNTLASYGYN------------LNTLG------- 309
Query: 179 MTIPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKL 238
+ A+ + A + AA AT+ E S G L
Sbjct: 310 --LGLSQAAATGALAAAAASANPAAAAANLLATYASEA------SASGSTAGGTAGTFAL 361
Query: 239 NQVARQQSHFAMMHGGTGFAGIDS--SSPEVKGYWASLDASTQTTHELTIPNNLIGCIIG 296
+A A G+ G S ++ + G S D S E+ +P NL+G I+G
Sbjct: 362 GSLA------AATAATNGYFGAASPLAASAILGTEKSTDGSKDVV-EIAVPENLVGAILG 414
Query: 297 RQGANINEIRQMSGAQIKIANP---VEGSSGRQVTITGSAASISLAQYLINARLSSEKGM 353
+ G + E ++++GA+I+I+ V G+ R+VTITG+ A+ AQYLI R++ E+G+
Sbjct: 415 KGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQAAQYLITQRITYEQGV 474
Score = 77.0 bits (188), Expect = 2e-14
Identities = 56/207 (27%), Positives = 107/207 (51%), Gaps = 26/207 (12%)
Query: 6 TESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGN-----CPERIIT 60
T +G + +++L+ GSIIGK G+++ ++++E+GA I +S+ ER+
Sbjct: 42 TNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCL 101
Query: 61 LTGPTNAIFKAFAMIIDKLEE-DINSSMTNSTAASRPPVTL--------RLVVPATQCGS 111
+ G A+ I +K+ E N + T + +P T+ +++VP + G
Sbjct: 102 IQGTVEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGL 161
Query: 112 LIGKGGCKIKEIRESTGAQVQVA--GDMLPNSTERAITIAGVPQSVTECVKQICLVMLET 169
+IGKGG +K + E +GA VQ++ D + N ER +T++G P+ + V+ ++++
Sbjct: 162 IIGKGGATVKAVMEQSGAWVQLSQKPDGI-NLQERVVTVSGEPEQNRKAVE----LIIQK 216
Query: 170 LSQSPQ-GRVMTIPYQ----PMPASSP 191
+ + PQ G + I Y P+ S+P
Sbjct: 217 IQEDPQSGSCLNISYANVTGPVANSNP 243
Score = 37.7 bits (86), Expect = 0.016
Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 283 ELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSS--GRQVTITGSAASISLAQ 340
++ +PN+ G IIG+ GA + + + SGA ++++ +G + R VT++G A
Sbjct: 151 KIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKAV 210
Query: 341 YLINARLSSEKGMG 354
LI ++ + G
Sbjct: 211 ELIIQKIQEDPQSG 224
Score = 30.0 bits (66), Expect = 3.3
Identities = 17/68 (25%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 283 ELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVE---GSSGRQVTITGSAASISLA 339
++ IP+ G IIG+ G I ++++ +GA IK++ + G++ R I G+ +++
Sbjct: 53 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNAV 112
Query: 340 QYLINARL 347
I ++
Sbjct: 113 HGFIAEKI 120
>gi|154355000 KH-type splicing regulatory protein [Homo sapiens]
Length = 711
Score = 82.0 bits (201), Expect = 7e-16
Identities = 89/350 (25%), Positives = 149/350 (42%), Gaps = 37/350 (10%)
Query: 25 VGSIIGKKGESVKRIREESGARINIS--EGNCPERIITLTGPTNAIFKAFAMIIDKLEED 82
VG IIG+ GE + +I+++SG ++ IS G PER ++LTG ++ KA M+ D +
Sbjct: 156 VGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQKAKMMLDDIVSRG 215
Query: 83 INS---SMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP 139
++ + +++PA + G +IGKGG IK+++E G ++ + D
Sbjct: 216 RGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQ 275
Query: 140 N-STERAITIAGVPQSVTECVKQICLVMLETLSQSPQG----------RVMTIPYQPMPA 188
N + ++ + I G P V+Q C ++++ L + QG R+ P+P
Sbjct: 276 NTNVDKPLRIIGDPYK----VQQACEMVMDILRERDQGGFGDRNEYGSRIGGGIDVPVPR 331
Query: 189 SSPVICAGGQ----DRCSDAAG--YPHATHDLEGPPLDAYSIQGQHTISPLDLAKLNQVA 242
S + G + + AG D GP A H + P D +
Sbjct: 332 HSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPEKIA------HIMGPPDRCEHAARI 385
Query: 243 RQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELT--IPNNLIGCIIGRQGA 300
++ G G G P +G E+T IP + G +IGR G
Sbjct: 386 INDLLQSLRSGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGE 445
Query: 301 NINEIRQMSGAQIKIAN--PVEGSSG-RQVTITGSAASISLAQYLINARL 347
N+ I Q +GA ++I+ P G + I GS I A+ LI ++
Sbjct: 446 NVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKI 495
Score = 67.8 bits (164), Expect = 1e-11
Identities = 59/222 (26%), Positives = 90/222 (40%), Gaps = 29/222 (13%)
Query: 25 VGSIIGKKGESVKRIREESGARINISE--GNCPERIITLTGPTNAIFKAFAMIIDKLEED 82
VG +IG+ GE +K+I+ ++G RI + G PE+I + GP + A +I D L+
Sbjct: 334 VGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPDRCEHAARIINDLLQSL 393
Query: 83 INSSMTNSTAASRPPV----------------TLRLVVPATQCGSLIGKGGCKIKEIRES 126
+ PP + +P +CG +IG+GG +K I +
Sbjct: 394 RSGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQ 453
Query: 127 TGAQVQVAGDMLPNSTE--RAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQ 184
TGA V+++ + PN + I G PQ + + ++E + P V P
Sbjct: 454 TGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQ-----LIEEKIEGPLCPVGPGPGG 508
Query: 185 PMPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQG 226
P PA G PHA GPP Y QG
Sbjct: 509 PGPAGPMGPFNPGPFNQGPPGAPPHA----GGPPPHQYPPQG 546
Score = 53.9 bits (128), Expect = 2e-07
Identities = 26/75 (34%), Positives = 46/75 (61%)
Query: 278 TQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASIS 337
T T E +P+ ++G IIGR G IN+I+Q SG +++I+ G R V++TG+ S+
Sbjct: 143 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQ 202
Query: 338 LAQYLINARLSSEKG 352
A+ +++ +S +G
Sbjct: 203 KAKMMLDDIVSRGRG 217
Score = 52.8 bits (125), Expect = 5e-07
Identities = 51/197 (25%), Positives = 89/197 (45%), Gaps = 18/197 (9%)
Query: 9 GLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI----SEGNCPERIITLTGP 64
G N T+ ++ GK G +IGK GE++K+++E +G ++ + S+ ++ + + G
Sbjct: 230 GQNGTVQEIMIPAGK-AGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGD 288
Query: 65 TNAIFKAFAMIIDKL-EEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEI 123
+ +A M++D L E D + SR + + VP G +IG+ G IK+I
Sbjct: 289 PYKVQQACEMVMDILRERDQGGFGDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKI 348
Query: 124 RESTGAQVQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPY 183
+ G ++Q D E+ I G P E +I +L++L P G
Sbjct: 349 QNDAGVRIQFKQDD-GTGPEKIAHIMGPPDR-CEHAARIINDLLQSLRSGPPG------- 399
Query: 184 QPMPASSPVICAGGQDR 200
P P + GG+ R
Sbjct: 400 ---PPGGPGMPPGGRGR 413
Score = 43.1 bits (100), Expect = 4e-04
Identities = 63/287 (21%), Positives = 109/287 (37%), Gaps = 40/287 (13%)
Query: 81 EDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDM--L 138
+ I+S + R +T VP G +IG+GG +I +I++ +G +VQ++ D L
Sbjct: 128 DSISSQLGPIHPPPRTSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGL 187
Query: 139 PNSTERAITIAGVPQSVTECVKQICLVMLETLSQSP--------QGRVMTIPYQPMPASS 190
P ER++++ G P+SV + + ++ P G+ T+ +PA
Sbjct: 188 P---ERSVSLTGAPESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGK 244
Query: 191 P--VICAGGQ--DRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPL----DLAKLNQVA 242
VI GG+ + + AG L Q + PL D K+ Q
Sbjct: 245 AGLVIGKGGETIKQLQERAGVKMI--------LIQDGSQNTNVDKPLRIIGDPYKVQQAC 296
Query: 243 RQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANI 302
GF + + G ++ +P + +G +IGR G I
Sbjct: 297 EMVMDILRERDQGGFGDRNEYGSRIGG-----------GIDVPVPRHSVGVVIGRSGEMI 345
Query: 303 NEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINARLSS 349
+I+ +G +I+ + I G A +IN L S
Sbjct: 346 KKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPDRCEHAARIINDLLQS 392
>gi|100816392 far upstream element (FUSE) binding protein 3 [Homo
sapiens]
Length = 572
Score = 81.6 bits (200), Expect = 1e-15
Identities = 91/354 (25%), Positives = 144/354 (40%), Gaps = 44/354 (12%)
Query: 23 KEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITLTGPTNAIFKAFAMIIDKLE 80
K VG IIG+ GE + RI+ ESG +I I+ PER LTG +I +A ++ ++
Sbjct: 87 KMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQAKRLLGQIVD 146
Query: 81 EDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQ-VQVAGDMLP 139
N ++ S + +++PA++ G +IG+GG IK+++E TG + V + LP
Sbjct: 147 RCRNGPGFHNDIDSNSTIQ-EILIPASKVGLVIGRGGETIKQLQERTGVKMVMIQDGPLP 205
Query: 140 NSTERAITIAGVPQSVTECVKQICLVMLETLS----------QSPQGRVMTIPYQPMPAS 189
++ + I G V + + + ++ E S G P A
Sbjct: 206 TGADKPLRITGDAFKVQQAREMVLEIIREKDQADFRGVRGDFNSRMGGGSIEVSVPRFAV 265
Query: 190 SPVICAGGQ--DRCSDAAGY-----------PHATHDLEGPPLDAYSIQGQHTISPLDLA 236
VI G+ + + AG P + GPP H IS L L
Sbjct: 266 GIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAAQVMGPPDRCQ--HAAHIISELILT 323
Query: 237 KLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIG 296
A G G +G W+ T+P + G +IG
Sbjct: 324 ------------AQERDGFGGLAAARGRGRGRGDWSVGAPGGVQEITYTVPADKCGLVIG 371
Query: 297 RQGANINEIRQMSGAQIKI-ANPVEGSSG--RQVTITGSAASISLAQYLINARL 347
+ G NI I Q SGA +++ NP S R+ TI G I +A+ LI+ ++
Sbjct: 372 KGGENIKSINQQSGAHVELQRNPPPNSDPNLRRFTIRGVPQQIEVARQLIDEKV 425
Score = 73.9 bits (180), Expect = 2e-13
Identities = 74/248 (29%), Positives = 106/248 (42%), Gaps = 31/248 (12%)
Query: 25 VGSIIGKKGESVKRIREESGARINIS--EGNCPERIITLTGPTNAIFKAFAMIIDKL--- 79
VG +IG+ GE +K+I+ ++G RI +G PER + GP + A A II +L
Sbjct: 265 VGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAAQVMGPPDRCQHA-AHIISELILT 323
Query: 80 --EEDINSSMTN-----------STAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRES 126
E D + S A + VPA +CG +IGKGG IK I +
Sbjct: 324 AQERDGFGGLAAARGRGRGRGDWSVGAPGGVQEITYTVPADKCGLVIGKGGENIKSINQQ 383
Query: 127 TGAQVQVAGDMLPNSTE--RAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQ 184
+GA V++ + PNS R TI GVPQ + E +Q+ + + G P+
Sbjct: 384 SGAHVELQRNPPPNSDPNLRRFTIRGVPQQI-EVARQLIDEKVGGTNLGAPGAFGQSPFS 442
Query: 185 PMPAS------SPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKL 238
PA P + + G PH+T + GPP A+ QG +
Sbjct: 443 QPPAPPHQNTFPPRSSGCFPNMAAKVNGNPHST-PVSGPP--AFLTQGWGSTYQAWQQPT 499
Query: 239 NQVARQQS 246
QV QQS
Sbjct: 500 QQVPSQQS 507
Score = 53.5 bits (127), Expect = 3e-07
Identities = 43/169 (25%), Positives = 80/169 (47%), Gaps = 27/169 (15%)
Query: 18 LLMHGKEVGSIIGKKGESVKRIREESGAR-INISEGNCP---ERIITLTGPTNAIFKAFA 73
+L+ +VG +IG+ GE++K+++E +G + + I +G P ++ + +TG + +A
Sbjct: 167 ILIPASKVGLVIGRGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDAFKVQQARE 226
Query: 74 MIIDKLEE-----------DINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKE 122
M+++ + E D NS M ++ + VP G +IG+ G IK+
Sbjct: 227 MVLEIIREKDQADFRGVRGDFNSRMGGG--------SIEVSVPRFAVGIVIGRNGEMIKK 278
Query: 123 IRESTGAQVQVAGDMLPNSTERAITIAGVP---QSVTECVKQICLVMLE 168
I+ G ++Q D S ERA + G P Q + ++ L E
Sbjct: 279 IQNDAGVRIQFKPDD-GISPERAAQVMGPPDRCQHAAHIISELILTAQE 326
Score = 48.1 bits (113), Expect = 1e-05
Identities = 25/66 (37%), Positives = 38/66 (57%)
Query: 278 TQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASIS 337
T T E +P+ ++G IIGR G I+ I+ SG +I+IA+ G R +TG+ SI
Sbjct: 76 TVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIE 135
Query: 338 LAQYLI 343
A+ L+
Sbjct: 136 QAKRLL 141
Score = 40.4 bits (93), Expect = 0.002
Identities = 58/260 (22%), Positives = 102/260 (39%), Gaps = 26/260 (10%)
Query: 95 RPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVPQS 154
R +T VP G +IG+GG +I I+ +G ++Q+A + ER + G P+S
Sbjct: 75 RTVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASES-SGIPERPCVLTGTPES 133
Query: 155 VTECVKQICLVMLETLSQSPQ-----GRVMTIPYQPMPASSP--VICAGGQ--DRCSDAA 205
+ E K++ +++ P TI +PAS VI GG+ + +
Sbjct: 134 I-EQAKRLLGQIVDRCRNGPGFHNDIDSNSTIQEILIPASKVGLVIGRGGETIKQLQERT 192
Query: 206 GYPHATHDLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSP 265
G ++ PL + + D K+ Q F G+
Sbjct: 193 GVKMVM--IQDGPLPTGADKPLRITG--DAFKVQQAREMVLEIIREKDQADFRGVRGDFN 248
Query: 266 EVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEG-SSG 324
G + E+++P +G +IGR G I +I+ +G +I+ P +G S
Sbjct: 249 SRMG---------GGSIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQF-KPDDGISPE 298
Query: 325 RQVTITGSAASISLAQYLIN 344
R + G A ++I+
Sbjct: 299 RAAQVMGPPDRCQHAAHIIS 318
>gi|64085377 insulin-like growth factor 2 mRNA binding protein 2
isoform a [Homo sapiens]
Length = 599
Score = 79.0 bits (193), Expect = 6e-15
Identities = 86/359 (23%), Positives = 155/359 (43%), Gaps = 55/359 (15%)
Query: 4 GVTESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI---SEGNCPERIIT 60
G T + +R+L+ + VG+IIGK+G ++K I +++ +R++I E+ +T
Sbjct: 184 GGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVT 243
Query: 61 LTGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKI 120
+ +A MI++ ++++ + + + L+++ G LIGK G +
Sbjct: 244 IHATPEGTSEACRMILEIMQKEADETKL------AEEIPLKILAHNGLVGRLIGKEGRNL 297
Query: 121 KEIRESTGAQVQVAG--DMLPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRV 178
K+I TG ++ ++ D+ + ER IT+ G ++ +I ++ L ++ + +
Sbjct: 298 KKIEHETGTKITISSLQDLSIYNPERTITVKGTVEACASAEIEI----MKKLREAFENDM 353
Query: 179 MTIPYQP-----MPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPL 233
+ + Q + S+ I + G S AG A PP Y H+
Sbjct: 354 LAVNQQANLIPGLNLSALGIFSTGLSVLSPPAGPRGA------PPAAPYHPFTTHS---- 403
Query: 234 DLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGC 293
+F+ ++ F P Y Q L IP +G
Sbjct: 404 ------------GYFSSLYPHHQFGPF----PHHHSY------PEQEIVNLFIPTQAVGA 441
Query: 294 IIGRQGANINEIRQMSGAQIKIANPVEGS--SGRQVTITGSAASISLAQYLINARLSSE 350
IIG++GA+I ++ + +GA IKIA P EG S R V ITG + AQ I +L E
Sbjct: 442 IIGKKGAHIKQLARFAGASIKIA-PAEGPDVSERMVIITGPPEAQFKAQGRIFGKLKEE 499
Score = 76.3 bits (186), Expect = 4e-14
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 12/168 (7%)
Query: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCP---ERIITLTGPTNAIFKAF 72
+ L + + VG+IIGKKG +K++ +GA I I+ P ER++ +TGP A FKA
Sbjct: 430 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQ 489
Query: 73 AMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQ 132
I KL+E+ + N + +R VP++ G +IGKGG + E++ T A+V
Sbjct: 490 GRIFGKLKEE---NFFNPKEEVKLEAHIR--VPSSTAGRVIGKGGKTVNELQNLTSAEVI 544
Query: 133 VAGDMLPNSTERAIT-IAG---VPQSVTECVKQICLVMLETLSQSPQG 176
V D P+ E I I G Q+ +++I + + + PQG
Sbjct: 545 VPRDQTPDENEEVIVRIIGHFFASQTAQRKIREIVQQVKQQEQKYPQG 592
Score = 49.7 bits (117), Expect = 4e-06
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
Query: 1 MDAGVTESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGN-----CP 55
M E+ L + +++L H VG +IGK+G ++K+I E+G +I IS P
Sbjct: 262 MQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNP 321
Query: 56 ERIITLTGPTNAIFKAFAMIIDKLEEDINSSM 87
ER IT+ G A A I+ KL E + M
Sbjct: 322 ERTITVKGTVEACASAEIEIMKKLREAFENDM 353
Score = 43.1 bits (100), Expect = 4e-04
Identities = 28/101 (27%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Query: 100 LRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTECV 159
+ L +P G++IGK G IK++ GA +++A P+ +ER + I G P++ +
Sbjct: 430 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQ 489
Query: 160 KQICLVMLETLSQSPQGRVMTIPYQPMPASSP--VICAGGQ 198
+I + E +P+ V + +P+S+ VI GG+
Sbjct: 490 GRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGK 530
Score = 28.5 bits (62), Expect = 9.6
Identities = 9/46 (19%), Positives = 25/46 (54%)
Query: 284 LTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTI 329
+ +P++ G +IG+ G +NE++ ++ A++ + +V +
Sbjct: 514 IRVPSSTAGRVIGKGGKTVNELQNLTSAEVIVPRDQTPDENEEVIV 559
>gi|56118219 insulin-like growth factor 2 mRNA binding protein 2
isoform b [Homo sapiens]
Length = 556
Score = 76.3 bits (186), Expect = 4e-14
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 12/168 (7%)
Query: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCP---ERIITLTGPTNAIFKAF 72
+ L + + VG+IIGKKG +K++ +GA I I+ P ER++ +TGP A FKA
Sbjct: 387 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQ 446
Query: 73 AMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQ 132
I KL+E+ + N + +R VP++ G +IGKGG + E++ T A+V
Sbjct: 447 GRIFGKLKEE---NFFNPKEEVKLEAHIR--VPSSTAGRVIGKGGKTVNELQNLTSAEVI 501
Query: 133 VAGDMLPNSTERAIT-IAG---VPQSVTECVKQICLVMLETLSQSPQG 176
V D P+ E I I G Q+ +++I + + + PQG
Sbjct: 502 VPRDQTPDENEEVIVRIIGHFFASQTAQRKIREIVQQVKQQEQKYPQG 549
Score = 72.4 bits (176), Expect = 6e-13
Identities = 62/226 (27%), Positives = 102/226 (45%), Gaps = 28/226 (12%)
Query: 1 MDAGVTESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNC-----P 55
M E+ L + +++L H VG +IGK+G ++K+I E+G +I IS P
Sbjct: 262 MQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNP 321
Query: 56 ERIITLTGPTNAIFKAFAMIIDKLEEDINSSM----TNSTAASR---------------- 95
ER IT+ G A A I+ KL E + M T+S S
Sbjct: 322 ERTITVKGTVEACASAEIEIMKKLREAFENDMLAVNTHSGYFSSLYPHHQFGPFPHHHSY 381
Query: 96 -PPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVPQS 154
+ L +P G++IGK G IK++ GA +++A P+ +ER + I G P++
Sbjct: 382 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEA 441
Query: 155 VTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASSP--VICAGGQ 198
+ +I + E +P+ V + +P+S+ VI GG+
Sbjct: 442 QFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGK 487
Score = 60.5 bits (145), Expect = 2e-09
Identities = 69/275 (25%), Positives = 117/275 (42%), Gaps = 38/275 (13%)
Query: 100 LRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTECV 159
LR++VP G++IGK G IK I + T ++V + + E+ +TI P+ +E
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSEAC 255
Query: 160 KQICLVMLETLSQSPQGRVMTIPYQPMPASSPVICAGGQD-----RCSDAAGYPHATHDL 214
+ I +M + ++ IP + + + V G++ + G L
Sbjct: 256 RMILEIMQKEADETKLAE--EIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSL 313
Query: 215 EGPPLDAYS----IQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGY 270
+ L Y+ I + T+ A++ + + + F +++ S GY
Sbjct: 314 QD--LSIYNPERTITVKGTVEACASAEIEIMKKLREAFE-----NDMLAVNTHS----GY 362
Query: 271 WASL-------------DASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIAN 317
++SL Q L IP +G IIG++GA+I ++ + +GA IKIA
Sbjct: 363 FSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIA- 421
Query: 318 PVEGS--SGRQVTITGSAASISLAQYLINARLSSE 350
P EG S R V ITG + AQ I +L E
Sbjct: 422 PAEGPDVSERMVIITGPPEAQFKAQGRIFGKLKEE 456
Score = 58.5 bits (140), Expect = 9e-09
Identities = 37/156 (23%), Positives = 79/156 (50%), Gaps = 11/156 (7%)
Query: 4 GVTESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI---SEGNCPERIIT 60
G T + +R+L+ + VG+IIGK+G ++K I +++ +R++I E+ +T
Sbjct: 184 GGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVT 243
Query: 61 LTGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKI 120
+ +A MI++ ++++ + + + L+++ G LIGK G +
Sbjct: 244 IHATPEGTSEACRMILEIMQKEADETKL------AEEIPLKILAHNGLVGRLIGKEGRNL 297
Query: 121 KEIRESTGAQVQVAG--DMLPNSTERAITIAGVPQS 154
K+I TG ++ ++ D+ + ER IT+ G ++
Sbjct: 298 KKIEHETGTKITISSLQDLSIYNPERTITVKGTVEA 333
Score = 28.5 bits (62), Expect = 9.6
Identities = 9/46 (19%), Positives = 25/46 (54%)
Query: 284 LTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTI 329
+ +P++ G +IG+ G +NE++ ++ A++ + +V +
Sbjct: 471 IRVPSSTAGRVIGKGGKTVNELQNLTSAEVIVPRDQTPDENEEVIV 516
>gi|17402900 far upstream element-binding protein [Homo sapiens]
Length = 644
Score = 75.9 bits (185), Expect = 5e-14
Identities = 90/354 (25%), Positives = 146/354 (41%), Gaps = 49/354 (13%)
Query: 25 VGSIIGKKGESVKRIREESGARINIS--EGNCPERIITLTGPTNAIFKAFAMIIDKLEED 82
VG IIG+ GE + RI++ESG +I I+ G PER LTG ++ A ++D++ E
Sbjct: 112 VGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSA-KRLLDQIVEK 170
Query: 83 INSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNS- 141
+ +++PA++ G +IGKGG IK+++E G ++ + D N+
Sbjct: 171 GRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTG 230
Query: 142 TERAITIAGVPQSVTECVKQICLVML-----------ETLSQSPQGRVMTIPYQPMPASS 190
++ + I G P V + K++ L ++ E S+ + +P P A
Sbjct: 231 ADKPLRITGDPYKVQQ-AKEMVLELIRDQGGFREVRNEYGSRIGGNEGIDVPI-PRFAVG 288
Query: 191 PVICAGGQ--DRCSDAAGY-----------PHATHDLEGPPLDAYSIQGQHTISPL-DLA 236
VI G+ + + AG P + GPP + QH + DL
Sbjct: 289 IVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPERIAQITGPP-----DRCQHAAEIITDLL 343
Query: 237 KLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIG 296
+ Q GG G G +G W +P G IIG
Sbjct: 344 RSVQAGNP--------GGPGPGG--RGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIG 393
Query: 297 RQGANINEIRQMSGAQIKIAN---PVEGSSGRQVTITGSAASISLAQYLINARL 347
+ G I I Q SGA+I++ P + + TI G+ I A+ LI ++
Sbjct: 394 KGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKI 447
Score = 47.8 bits (112), Expect = 2e-05
Identities = 70/272 (25%), Positives = 114/272 (41%), Gaps = 39/272 (14%)
Query: 94 SRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDM--LPNSTERAITIAGV 151
SR +T VP G +IG+GG +I I++ +G ++Q+A D LP ER+ + G
Sbjct: 97 SRSVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP---ERSCMLTGT 153
Query: 152 PQSVTECVKQICLVMLETLSQSP-----QGRVMTIPYQPMPASSP--VICAGGQ--DRCS 202
P+SV + K++ ++E +P G + +PAS VI GG+ +
Sbjct: 154 PESV-QSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQ 212
Query: 203 DAAGYPHATHDLEGPPLDAYSIQGQHTISPL----DLAKLNQVARQQSHFAMMHGGTGFA 258
+ AG +GP Q PL D K+ Q GG
Sbjct: 213 ERAGVKMVMIQ-DGP-------QNTGADKPLRITGDPYKVQQAKEMVLELIRDQGG---- 260
Query: 259 GIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANP 318
EV+ + S + ++ IP +G +IGR G I +I+ +G +I+ P
Sbjct: 261 -----FREVRNEYGSRIGGNEGI-DVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQF-KP 313
Query: 319 VEGSSGRQVT-ITGSAASISLAQYLINARLSS 349
+G++ ++ ITG A +I L S
Sbjct: 314 DDGTTPERIAQITGPPDRCQHAAEIITDLLRS 345
Score = 47.0 bits (110), Expect = 3e-05
Identities = 36/165 (21%), Positives = 77/165 (46%), Gaps = 7/165 (4%)
Query: 18 LLMHGKEVGSIIGKKGESVKRIREESGAR-INISEG---NCPERIITLTGPTNAIFKAFA 73
+++ + G +IGK GE++K+++E +G + + I +G ++ + +TG + +A
Sbjct: 190 IMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQAKE 249
Query: 74 MIIDKLEEDINSSMTNSTAASR--PPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQV 131
M+++ + + + SR + + +P G +IG+ G IK+I+ G ++
Sbjct: 250 MVLELIRDQGGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRI 309
Query: 132 QVAGDMLPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQG 176
Q D + ER I G P + I ++ + +P G
Sbjct: 310 QFKPDD-GTTPERIAQITGPPDRCQHAAEIITDLLRSVQAGNPGG 353
Score = 38.1 bits (87), Expect = 0.012
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 24 EVGSIIGKKGESVKRIREESGARINISEGNCPE-----RIITLTGPTNAIFKAFAMIIDK 78
+ G IIGK GE++K I ++SGARI + P ++ T+ G I A +I +K
Sbjct: 387 KTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEK 446
Query: 79 LEEDIN 84
+ +N
Sbjct: 447 IGGPVN 452
>gi|5902724 neuro-oncological ventral antigen 2 [Homo sapiens]
Length = 492
Score = 75.1 bits (183), Expect = 9e-14
Identities = 52/178 (29%), Positives = 94/178 (52%), Gaps = 25/178 (14%)
Query: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGN-----CPERIITLTGPTNAIFK 70
+++L+ GSIIGK G+++ ++++E+GA I +S+ ER+ + G A+
Sbjct: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 94
Query: 71 AFAMIIDKLEEDINSSMTNSTAAS--RPPVTL--------RLVVPATQCGSLIGKGGCKI 120
+ I +K+ E I +MT + +P T+ +L+VP + G +IGKGG +
Sbjct: 95 VHSFIAEKVRE-IPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATV 153
Query: 121 KEIRESTGAQVQVAGDMLP---NSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQ 175
K + E +GA VQ++ P N ER +T++G P+ V + V I ++ + + PQ
Sbjct: 154 KAVMEQSGAWVQLS--QKPEGINLQERVVTVSGEPEQVHKAVSAI----VQKVQEDPQ 205
Score = 64.7 bits (156), Expect = 1e-10
Identities = 32/77 (41%), Positives = 53/77 (68%), Gaps = 3/77 (3%)
Query: 283 ELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVE---GSSGRQVTITGSAASISLA 339
E+ +P NL+G I+G+ G + E ++++GA+I+I+ E G+ R+VTITGS A+ A
Sbjct: 410 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAA 469
Query: 340 QYLINARLSSEKGMGCS 356
QYLI+ R++ E+G+ S
Sbjct: 470 QYLISQRVTYEQGVRAS 486
Score = 54.7 bits (130), Expect = 1e-07
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 17/118 (14%)
Query: 17 RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG----NCPERIITLTGPTNAIFKAF 72
+L++ G IIGK G +VK + E+SGA + +S+ N ER++T++G + KA
Sbjct: 134 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAV 193
Query: 73 AMIIDKLEEDINSS-------------MTNSTAASRPPVTLRLVVPATQCGSLIGKGG 117
+ I+ K++ED SS + NS P + V+PA S G
Sbjct: 194 SAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGSPYASPADVLPAAAAASAAAASG 251
Score = 47.4 bits (111), Expect = 2e-05
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 92 AASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVA--GDMLPNSTERAITIA 149
AA + + VP G+++GKGG + E +E TGA++Q++ G+ LP + R +TI
Sbjct: 401 AAESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTIT 460
Query: 150 GVP 152
G P
Sbjct: 461 GSP 463
Score = 38.9 bits (89), Expect = 0.007
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 283 ELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSS--GRQVTITGSAASISLA 339
+L +PN+ G IIG+ GA + + + SGA ++++ EG + R VT++G + A
Sbjct: 134 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKA 192
Score = 31.2 bits (69), Expect = 1.5
Identities = 17/64 (26%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 283 ELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVE---GSSGRQVTITGSAASISLA 339
++ IP+ G IIG+ G I ++++ +GA IK++ + G++ R + G+A +++
Sbjct: 36 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 95
Query: 340 QYLI 343
I
Sbjct: 96 HSFI 99
Score = 30.8 bits (68), Expect = 1.9
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 7/69 (10%)
Query: 25 VGSIIGKKGESVKRIREESGARINISE-----GNCPERIITLTGPTNAIFKAFAMIIDKL 79
VG+I+GK G+++ +E +GARI IS+ R +T+TG A A +I ++
Sbjct: 418 VGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQYLISQRV 477
Query: 80 --EEDINSS 86
E+ + +S
Sbjct: 478 TYEQGVRAS 486
>gi|56237027 insulin-like growth factor 2 mRNA binding protein 1
isoform 1 [Homo sapiens]
Length = 577
Score = 73.2 bits (178), Expect = 3e-13
Identities = 81/358 (22%), Positives = 143/358 (39%), Gaps = 67/358 (18%)
Query: 3 AGVTESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI---SEGNCPERII 59
AG V + +RLL+ + VG+IIGK+G +++ I +++ ++I++ E+ I
Sbjct: 185 AGAPAKQQQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAI 244
Query: 60 TLTGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCK 119
++ A MI++ + ++ + T V L+++ G LIGK G
Sbjct: 245 SVHSTPEGCSSACKMILEIMHKEAKDTKT------ADEVPLKILAHNNFVGRLIGKEGRN 298
Query: 120 IKEIRESTGAQVQVAG--DMLPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGR 177
+K++ + T ++ ++ D+ + ER IT+ G ++ ++I + E
Sbjct: 299 LKKVEQDTETKITISSLQDLTLYNPERTITVKGAIENCCRAEQEIMKKVREAYE------ 352
Query: 178 VMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAK 237
+D A A S+Q H I L+LA
Sbjct: 353 ------------------------NDVA---------------AMSLQ-SHLIPGLNLAA 372
Query: 238 LNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGR 297
+ S SS Y + + A Q ++ IP +G IIG+
Sbjct: 373 VGLFPASSS---------AVPPPPSSVTGAAPYSSFMQAPEQEMVQVFIPAQAVGAIIGK 423
Query: 298 QGANINEIRQMSGAQIKIANP-VEGSSGRQVTITGSAASISLAQYLINARLSSEKGMG 354
+G +I ++ + + A IKIA P S R V ITG + AQ I +L E G
Sbjct: 424 KGQHIKQLSRFASASIKIAPPETPDSKVRMVIITGPPEAQFKAQGRIYGKLKEENFFG 481
Score = 71.2 bits (173), Expect = 1e-12
Identities = 44/136 (32%), Positives = 74/136 (54%), Gaps = 12/136 (8%)
Query: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPE---RIITLTGPTNAIFKAF 72
+++ + + VG+IIGKKG+ +K++ + A I I+ P+ R++ +TGP A FKA
Sbjct: 408 VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITGPPEAQFKAQ 467
Query: 73 AMIIDKLEEDINSSMTNSTAASRPPVTLR--LVVPATQCGSLIGKGGCKIKEIRESTGAQ 130
I KL+E+ + + V L + VPA+ G +IGKGG + E++ T A+
Sbjct: 468 GRIYGKLKEE-------NFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAE 520
Query: 131 VQVAGDMLPNSTERAI 146
V V D P+ ++ I
Sbjct: 521 VVVPRDQTPDENDQVI 536
Score = 60.5 bits (145), Expect = 2e-09
Identities = 54/230 (23%), Positives = 99/230 (43%), Gaps = 47/230 (20%)
Query: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNC-----PERIITLTGPTNAIFK 70
+++L H VG +IGK+G ++K++ +++ +I IS PER IT+ G +
Sbjct: 279 LKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYNPERTITVKGAIENCCR 338
Query: 71 AFAMIIDKLEEDINSSMT----------------------NSTAASRPPVTL-------- 100
A I+ K+ E + + +S+A PP ++
Sbjct: 339 AEQEIMKKVREAYENDVAAMSLQSHLIPGLNLAAVGLFPASSSAVPPPPSSVTGAAPYSS 398
Query: 101 ----------RLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAG 150
++ +PA G++IGK G IK++ A +++A P+S R + I G
Sbjct: 399 FMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITG 458
Query: 151 VPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASSP--VICAGGQ 198
P++ + +I + E P+ V + +PAS+ VI GG+
Sbjct: 459 PPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGK 508
Score = 29.6 bits (65), Expect = 4.3
Identities = 16/63 (25%), Positives = 26/63 (41%)
Query: 253 GGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQ 312
GG G G V + L +P +G IIG++GA I I + + ++
Sbjct: 169 GGFGSRGQPRQGSPVAAGAPAKQQQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSK 228
Query: 313 IKI 315
I +
Sbjct: 229 IDV 231
>gi|30795212 insulin-like growth factor 2 mRNA binding protein 3
[Homo sapiens]
Length = 579
Score = 72.0 bits (175), Expect = 8e-13
Identities = 42/137 (30%), Positives = 72/137 (52%), Gaps = 8/137 (5%)
Query: 13 TLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPE---RIITLTGPTNAIF 69
T T+ L + VG+IIGK+G+ +K++ +GA I I+ P+ R++ +TGP A F
Sbjct: 405 TETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQF 464
Query: 70 KAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGA 129
KA I K++E+ S + + VP+ G +IGKGG + E++ + A
Sbjct: 465 KAQGRIYGKIKEENFVSPKEEV-----KLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSA 519
Query: 130 QVQVAGDMLPNSTERAI 146
+V V D P+ ++ +
Sbjct: 520 EVVVPRDQTPDENDQVV 536
Score = 58.5 bits (140), Expect = 9e-09
Identities = 80/388 (20%), Positives = 157/388 (40%), Gaps = 72/388 (18%)
Query: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI----SEGNCPERIITLTGP--TNA 67
L +RLL+ + VG+IIGK+G +++ I +++ ++I++ + G + I L+ P T+A
Sbjct: 196 LPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEGTSA 255
Query: 68 IFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIREST 127
K+ I+ K +DI + + L+++ G LIGK G +K+I + T
Sbjct: 256 ACKSILEIMHKEAQDIKFT---------EEIPLKILAHNNFVGRLIGKEGRNLKKIEQDT 306
Query: 128 GAQVQVA--GDMLPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQP 185
++ ++ ++ + ER IT+ G ++ + ++I ++ + +S + + ++ Q
Sbjct: 307 DTKITISPLQELTLYNPERTITVKGNVETCAKAEEEI----MKKIRESYENDIASMNLQ- 361
Query: 186 MPASSPVICAGGQDRCSDAAGYPHATHDLEGPP---------LDAYSIQGQHTISP---- 232
P + +G P T GPP + + H P
Sbjct: 362 -AHLIPGLNLNALGLFPPTSGMPPPT---SGPPSAMTPPYPQFEQSETETVHLFIPALSV 417
Query: 233 -LDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVK----------------------- 268
+ K Q +Q S FA G + +P+ K
Sbjct: 418 GAIIGKQGQHIKQLSRFA----GASIKIAPAEAPDAKVRMVIITGPPEAQFKAQGRIYGK 473
Query: 269 ---GYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGR 325
+ S + + +P+ G +IG+ G +NE++ +S A++ +
Sbjct: 474 IKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVVPRDQTPDEND 533
Query: 326 QVT--ITGSAASISLAQYLINARLSSEK 351
QV ITG + +AQ I L+ K
Sbjct: 534 QVVVKITGHFYACQVAQRKIQEILTQVK 561
Score = 33.5 bits (75), Expect = 0.30
Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 2/102 (1%)
Query: 239 NQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQ 298
+++A QQ+ G G SS G S L +P +G IIG++
Sbjct: 156 DEMAAQQNPLQQPRGRRGLGQRGSSRQGSPGS-VSKQKPCDLPLRLLVPTQFVGAIIGKE 214
Query: 299 GANINEIRQMSGAQIKIANPVE-GSSGRQVTITGSAASISLA 339
GA I I + + ++I + G++ + +TI + S A
Sbjct: 215 GATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEGTSAA 256
>gi|238624257 insulin-like growth factor 2 mRNA binding protein 1
isoform 2 [Homo sapiens]
Length = 438
Score = 71.2 bits (173), Expect = 1e-12
Identities = 44/136 (32%), Positives = 74/136 (54%), Gaps = 12/136 (8%)
Query: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPE---RIITLTGPTNAIFKAF 72
+++ + + VG+IIGKKG+ +K++ + A I I+ P+ R++ +TGP A FKA
Sbjct: 269 VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITGPPEAQFKAQ 328
Query: 73 AMIIDKLEEDINSSMTNSTAASRPPVTLR--LVVPATQCGSLIGKGGCKIKEIRESTGAQ 130
I KL+E+ + + V L + VPA+ G +IGKGG + E++ T A+
Sbjct: 329 GRIYGKLKEE-------NFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAE 381
Query: 131 VQVAGDMLPNSTERAI 146
V V D P+ ++ I
Sbjct: 382 VVVPRDQTPDENDQVI 397
Score = 60.5 bits (145), Expect = 2e-09
Identities = 54/230 (23%), Positives = 99/230 (43%), Gaps = 47/230 (20%)
Query: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNC-----PERIITLTGPTNAIFK 70
+++L H VG +IGK+G ++K++ +++ +I IS PER IT+ G +
Sbjct: 140 LKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYNPERTITVKGAIENCCR 199
Query: 71 AFAMIIDKLEEDINSSMT----------------------NSTAASRPPVTL-------- 100
A I+ K+ E + + +S+A PP ++
Sbjct: 200 AEQEIMKKVREAYENDVAAMSLQSHLIPGLNLAAVGLFPASSSAVPPPPSSVTGAAPYSS 259
Query: 101 ----------RLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAG 150
++ +PA G++IGK G IK++ A +++A P+S R + I G
Sbjct: 260 FMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITG 319
Query: 151 VPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASSP--VICAGGQ 198
P++ + +I + E P+ V + +PAS+ VI GG+
Sbjct: 320 PPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGK 369
Score = 47.8 bits (112), Expect = 2e-05
Identities = 63/287 (21%), Positives = 109/287 (37%), Gaps = 64/287 (22%)
Query: 77 DKLEEDINSSMTNSTAASRPP------VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQ 130
+++ + +++ N T ++R V L+++ G LIGK G +K++ + T +
Sbjct: 111 EQVNTESETAVVNVTYSNREQTRQADEVPLKILAHNNFVGRLIGKEGRNLKKVEQDTETK 170
Query: 131 VQVAG--DMLPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPA 188
+ ++ D+ + ER IT+ G ++ ++I + E
Sbjct: 171 ITISSLQDLTLYNPERTITVKGAIENCCRAEQEIMKKVREAYE----------------- 213
Query: 189 SSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQSHF 248
+D A A S+Q H I L+LA + S
Sbjct: 214 -------------NDVA---------------AMSLQS-HLIPGLNLAAVGLFPASSS-- 242
Query: 249 AMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQM 308
SS Y + + A Q ++ IP +G IIG++G +I ++ +
Sbjct: 243 -------AVPPPPSSVTGAAPYSSFMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRF 295
Query: 309 SGAQIKIANP-VEGSSGRQVTITGSAASISLAQYLINARLSSEKGMG 354
+ A IKIA P S R V ITG + AQ I +L E G
Sbjct: 296 ASASIKIAPPETPDSKVRMVIITGPPEAQFKAQGRIYGKLKEENFFG 342
>gi|145312259 tudor and KH domain containing isoform a [Homo
sapiens]
Length = 561
Score = 56.6 bits (135), Expect = 3e-08
Identities = 42/147 (28%), Positives = 82/147 (55%), Gaps = 21/147 (14%)
Query: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCPERIITLTGPTNAIFKAF 72
+ I + + + V IIG++G ++K++R+++GARI++ +E ER++ ++G F
Sbjct: 53 IEIEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDTEDVGDERVLLISG--------F 104
Query: 73 AMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQV- 131
+ + K + I+ +T +T PV+ +L VP G +IG+GG I+ I +++GA++
Sbjct: 105 PVQVCKAKAAIHQILTENT-----PVSEQLSVPQRSVGRIIGRGGETIRSICKASGAKIT 159
Query: 132 ---QVAGDMLPNSTERAITIAGVPQSV 155
+ G +L R I I+G + V
Sbjct: 160 CDKESEGTLL---LSRLIKISGTQKEV 183
Score = 44.7 bits (104), Expect = 1e-04
Identities = 25/80 (31%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 274 LDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGS--SGRQVTITG 331
L +T + +L++P +G IIGR G I I + SGA+I EG+ R + I+G
Sbjct: 119 LTENTPVSEQLSVPQRSVGRIIGRGGETIRSICKASGAKITCDKESEGTLLLSRLIKISG 178
Query: 332 SAASISLAQYLINARLSSEK 351
+ ++ A++LI ++S ++
Sbjct: 179 TQKEVAAAKHLILEKVSEDE 198
Score = 40.0 bits (92), Expect = 0.003
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 283 ELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYL 342
E+ +P + IIGRQGANI ++R+ +GA+I + G R + I+G + A+
Sbjct: 56 EMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDTEDVGDE-RVLLISGFPVQVCKAKAA 114
Query: 343 INARLS 348
I+ L+
Sbjct: 115 IHQILT 120
Score = 40.0 bits (92), Expect = 0.003
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 4/76 (5%)
Query: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI---SEGN-CPERIITLTGPTN 66
N ++ +L + + VG IIG+ GE+++ I + SGA+I SEG R+I ++G
Sbjct: 122 NTPVSEQLSVPQRSVGRIIGRGGETIRSICKASGAKITCDKESEGTLLLSRLIKISGTQK 181
Query: 67 AIFKAFAMIIDKLEED 82
+ A +I++K+ ED
Sbjct: 182 EVAAAKHLILEKVSED 197
Score = 39.3 bits (90), Expect = 0.005
Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 8/108 (7%)
Query: 91 TAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAG 150
T + + + VP +IG+ G IK++R+ TGA++ V D ER + I+G
Sbjct: 46 TFVGEDDIEIEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDV--DTEDVGDERVLLISG 103
Query: 151 VPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASSPVICAGGQ 198
P V + I ++ E S Q V P + +I GG+
Sbjct: 104 FPVQVCKAKAAIHQILTENTPVSEQLSV------PQRSVGRIIGRGGE 145
>gi|145312270 tudor and KH domain containing isoform a [Homo
sapiens]
Length = 561
Score = 56.6 bits (135), Expect = 3e-08
Identities = 42/147 (28%), Positives = 82/147 (55%), Gaps = 21/147 (14%)
Query: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCPERIITLTGPTNAIFKAF 72
+ I + + + V IIG++G ++K++R+++GARI++ +E ER++ ++G F
Sbjct: 53 IEIEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDTEDVGDERVLLISG--------F 104
Query: 73 AMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQV- 131
+ + K + I+ +T +T PV+ +L VP G +IG+GG I+ I +++GA++
Sbjct: 105 PVQVCKAKAAIHQILTENT-----PVSEQLSVPQRSVGRIIGRGGETIRSICKASGAKIT 159
Query: 132 ---QVAGDMLPNSTERAITIAGVPQSV 155
+ G +L R I I+G + V
Sbjct: 160 CDKESEGTLL---LSRLIKISGTQKEV 183
Score = 44.7 bits (104), Expect = 1e-04
Identities = 25/80 (31%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 274 LDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGS--SGRQVTITG 331
L +T + +L++P +G IIGR G I I + SGA+I EG+ R + I+G
Sbjct: 119 LTENTPVSEQLSVPQRSVGRIIGRGGETIRSICKASGAKITCDKESEGTLLLSRLIKISG 178
Query: 332 SAASISLAQYLINARLSSEK 351
+ ++ A++LI ++S ++
Sbjct: 179 TQKEVAAAKHLILEKVSEDE 198
Score = 40.0 bits (92), Expect = 0.003
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 283 ELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYL 342
E+ +P + IIGRQGANI ++R+ +GA+I + G R + I+G + A+
Sbjct: 56 EMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDTEDVGDE-RVLLISGFPVQVCKAKAA 114
Query: 343 INARLS 348
I+ L+
Sbjct: 115 IHQILT 120
Score = 40.0 bits (92), Expect = 0.003
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 4/76 (5%)
Query: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI---SEGN-CPERIITLTGPTN 66
N ++ +L + + VG IIG+ GE+++ I + SGA+I SEG R+I ++G
Sbjct: 122 NTPVSEQLSVPQRSVGRIIGRGGETIRSICKASGAKITCDKESEGTLLLSRLIKISGTQK 181
Query: 67 AIFKAFAMIIDKLEED 82
+ A +I++K+ ED
Sbjct: 182 EVAAAKHLILEKVSED 197
Score = 39.3 bits (90), Expect = 0.005
Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 8/108 (7%)
Query: 91 TAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAG 150
T + + + VP +IG+ G IK++R+ TGA++ V D ER + I+G
Sbjct: 46 TFVGEDDIEIEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDV--DTEDVGDERVLLISG 103
Query: 151 VPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASSPVICAGGQ 198
P V + I ++ E S Q V P + +I GG+
Sbjct: 104 FPVQVCKAKAAIHQILTENTPVSEQLSV------PQRSVGRIIGRGGE 145
>gi|145312256 tudor and KH domain containing isoform a [Homo
sapiens]
Length = 561
Score = 56.6 bits (135), Expect = 3e-08
Identities = 42/147 (28%), Positives = 82/147 (55%), Gaps = 21/147 (14%)
Query: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCPERIITLTGPTNAIFKAF 72
+ I + + + V IIG++G ++K++R+++GARI++ +E ER++ ++G F
Sbjct: 53 IEIEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDTEDVGDERVLLISG--------F 104
Query: 73 AMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQV- 131
+ + K + I+ +T +T PV+ +L VP G +IG+GG I+ I +++GA++
Sbjct: 105 PVQVCKAKAAIHQILTENT-----PVSEQLSVPQRSVGRIIGRGGETIRSICKASGAKIT 159
Query: 132 ---QVAGDMLPNSTERAITIAGVPQSV 155
+ G +L R I I+G + V
Sbjct: 160 CDKESEGTLL---LSRLIKISGTQKEV 183
Score = 44.7 bits (104), Expect = 1e-04
Identities = 25/80 (31%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 274 LDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGS--SGRQVTITG 331
L +T + +L++P +G IIGR G I I + SGA+I EG+ R + I+G
Sbjct: 119 LTENTPVSEQLSVPQRSVGRIIGRGGETIRSICKASGAKITCDKESEGTLLLSRLIKISG 178
Query: 332 SAASISLAQYLINARLSSEK 351
+ ++ A++LI ++S ++
Sbjct: 179 TQKEVAAAKHLILEKVSEDE 198
Score = 40.0 bits (92), Expect = 0.003
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 283 ELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYL 342
E+ +P + IIGRQGANI ++R+ +GA+I + G R + I+G + A+
Sbjct: 56 EMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDTEDVGDE-RVLLISGFPVQVCKAKAA 114
Query: 343 INARLS 348
I+ L+
Sbjct: 115 IHQILT 120
Score = 40.0 bits (92), Expect = 0.003
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 4/76 (5%)
Query: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI---SEGN-CPERIITLTGPTN 66
N ++ +L + + VG IIG+ GE+++ I + SGA+I SEG R+I ++G
Sbjct: 122 NTPVSEQLSVPQRSVGRIIGRGGETIRSICKASGAKITCDKESEGTLLLSRLIKISGTQK 181
Query: 67 AIFKAFAMIIDKLEED 82
+ A +I++K+ ED
Sbjct: 182 EVAAAKHLILEKVSED 197
Score = 39.3 bits (90), Expect = 0.005
Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 8/108 (7%)
Query: 91 TAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAG 150
T + + + VP +IG+ G IK++R+ TGA++ V D ER + I+G
Sbjct: 46 TFVGEDDIEIEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDV--DTEDVGDERVLLISG 103
Query: 151 VPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASSPVICAGGQ 198
P V + I ++ E S Q V P + +I GG+
Sbjct: 104 FPVQVCKAKAAIHQILTENTPVSEQLSV------PQRSVGRIIGRGGE 145
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.130 0.372
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,386,173
Number of Sequences: 37866
Number of extensions: 610013
Number of successful extensions: 1457
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 1035
Number of HSP's gapped (non-prelim): 270
length of query: 356
length of database: 18,247,518
effective HSP length: 103
effective length of query: 253
effective length of database: 14,347,320
effective search space: 3629871960
effective search space used: 3629871960
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.