| Name: C5orf47 | Sequence: fasta or formatted (176aa) | NCBI GI: 222352135 | |
|
Description: hypothetical protein LOC133491
| Not currently referenced in the text | ||
|
Composition:
Amino acid Percentage Count Longest homopolymer A alanine 10.8 19 3 C cysteine 1.7 3 1 D aspartate 1.7 3 1 E glutamate 5.7 10 2 F phenylalanine 1.7 3 1 G glycine 10.8 19 2 H histidine 1.1 2 1 I isoleucine 2.3 4 1 K lysine 7.4 13 5 L leucine 7.4 13 1 M methionine 2.3 4 1 N asparagine 2.3 4 1 P proline 4.0 7 1 Q glutamine 7.4 13 1 R arginine 10.2 18 1 S serine 9.7 17 2 T threonine 2.8 5 2 V valine 6.8 12 1 W tryptophan 1.1 2 1 Y tyrosine 2.8 5 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 hypothetical protein LOC133491 E2F3 0.037 E2F transcription factor 3 AMMECR1 0.037 AMMECR1 protein isoform 2 AMMECR1 0.037 AMMECR1 protein isoform 1 GATA4 0.028 GATA binding protein 4 LOC100292370 0.025 PREDICTED: hypothetical protein NECAP1 0.022 NECAP endocytosis associated 1 CLIC6 0.022 chloride intracellular channel 6 LRRC68 0.018 PREDICTED: leucine rich repeat containing 68 LRRC68 0.018 PREDICTED: leucine rich repeat containing 68 LOC730456 0.018 PREDICTED: hypothetical protein LRRC68 0.018 PREDICTED: leucine rich repeat containing 68 TSPYL4 0.018 TSPY-like 4 IRS4 0.018 insulin receptor substrate 4 CLEC11A 0.015 stem cell growth factor precursor RPAP2 0.015 RNA polymerase II associated protein 2 LOC728650 0.015 PREDICTED: hypothetical protein LOC100288668 0.012 PREDICTED: hypothetical protein XP_002343144 LOC100291673 0.012 PREDICTED: hypothetical protein XP_002344645 LOC100289881 0.012 PREDICTED: hypothetical protein XP_002347282 BSN 0.012 bassoon protein KIAA1462 0.012 hypothetical protein LOC57608 LOC728650 0.009 PREDICTED: hypothetical protein LOC100294236 0.009 PREDICTED: similar to diffuse panbronchiolitis crit... TAL1 0.009 T-cell acute lymphocytic leukemia 1 HMX1 0.009 homeo box (H6 family) 1 LOC100292655 0.009 PREDICTED: similar to armadillo repeat containing, ... GIN1 0.009 zinc finger, H2C2 domain containing LOC100290504 0.009 PREDICTED: hypothetical protein XP_002346416 LOC100287141 0.009 PREDICTED: hypothetical protein XP_002343631Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
