Guide to the Human Genome
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Search of human proteins with 22219467

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|22219467 nudix-type motif 2 [Homo sapiens]
         (147 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|22219467 nudix-type motif 2 [Homo sapiens]                         303   3e-83
gi|22219465 nudix-type motif 2 [Homo sapiens]                         303   3e-83
gi|4502125 nudix-type motif 2 [Homo sapiens]                          303   3e-83
gi|5729804 nudix-type motif 3 [Homo sapiens]                           41   3e-04
gi|40317634 nudix-type motif 4 isoform beta [Homo sapiens]             39   0.001
gi|37221177 nudix-type motif 11 [Homo sapiens]                         39   0.002
gi|40317632 nudix-type motif 4 isoform alpha [Homo sapiens]            39   0.002
gi|41393549 nudix-type motif 10 [Homo sapiens]                         38   0.003
gi|62543567 nudix (nucleoside diphosphate linked moiety X)-type ...    35   0.017
gi|20149583 nudix-type motif 6 isoform a [Homo sapiens]                35   0.023
gi|118026927 nudix (nucleoside diphosphate linked moiety X)-type...    35   0.023
gi|37594461 nudix-type motif 6 isoform b [Homo sapiens]                34   0.038
gi|126012571 heparan sulfate proteoglycan 2 [Homo sapiens]             31   0.33 
gi|8922792 nudix-type motif 15 [Homo sapiens]                          31   0.33 
gi|67782311 superkiller viralicidic activity 2-like homolog [Hom...    31   0.42 
gi|157785656 nudix motif 7 [Homo sapiens]                              31   0.42 
gi|13899267 nudix-type motif 12 [Homo sapiens]                         30   0.95 
gi|37594457 nudix-type motif 9 isoform b [Homo sapiens]                28   2.1  
gi|13129010 nudix-type motif 9 isoform a [Homo sapiens]                28   2.1  
gi|209364550 suppressor of S. cerevisiae gcr2 isoform 3 [Homo sa...    28   2.8  
gi|209364547 suppressor of S. cerevisiae gcr2 isoform 2 [Homo sa...    28   2.8  
gi|6005784 suppressor of S. cerevisiae gcr2 isoform 1 [Homo sapi...    28   2.8  
gi|32469515 nudix-type motif 8 [Homo sapiens]                          28   2.8  
gi|55770834 centromere protein F [Homo sapiens]                        28   3.6  
gi|154277118 spectrin repeat containing, nuclear envelope 1 isof...    27   4.7  
gi|23097308 spectrin repeat containing, nuclear envelope 1 isofo...    27   4.7  
gi|154277116 spectrin repeat containing, nuclear envelope 1 isof...    27   4.7  
gi|121949802 cancer/testis antigen family 47, member A1 [Homo sa...    27   6.1  
gi|121949798 cancer/testis antigen family 47, member A2 [Homo sa...    27   6.1  
gi|121949773 cancer/testis antigen family 47, member A3 [Homo sa...    27   6.1  

>gi|22219467 nudix-type motif 2 [Homo sapiens]
          Length = 147

 Score =  303 bits (777), Expect = 3e-83
 Identities = 147/147 (100%), Positives = 147/147 (100%)

Query: 1   MALRACGLIIFRRCLIPKVDNNAIEFLLLQASDGIHHWTPPKGHVEPGEDDLETALRETQ 60
           MALRACGLIIFRRCLIPKVDNNAIEFLLLQASDGIHHWTPPKGHVEPGEDDLETALRETQ
Sbjct: 1   MALRACGLIIFRRCLIPKVDNNAIEFLLLQASDGIHHWTPPKGHVEPGEDDLETALRETQ 60

Query: 61  EEAGIEAGQLTIIEGFKRELNYVARNKPKTVIYWLAEVKDYDVEIRLSHEHQAYRWLGLE 120
           EEAGIEAGQLTIIEGFKRELNYVARNKPKTVIYWLAEVKDYDVEIRLSHEHQAYRWLGLE
Sbjct: 61  EEAGIEAGQLTIIEGFKRELNYVARNKPKTVIYWLAEVKDYDVEIRLSHEHQAYRWLGLE 120

Query: 121 EACQLAQFKEMKAALQEGHQFLCSIEA 147
           EACQLAQFKEMKAALQEGHQFLCSIEA
Sbjct: 121 EACQLAQFKEMKAALQEGHQFLCSIEA 147


>gi|22219465 nudix-type motif 2 [Homo sapiens]
          Length = 147

 Score =  303 bits (777), Expect = 3e-83
 Identities = 147/147 (100%), Positives = 147/147 (100%)

Query: 1   MALRACGLIIFRRCLIPKVDNNAIEFLLLQASDGIHHWTPPKGHVEPGEDDLETALRETQ 60
           MALRACGLIIFRRCLIPKVDNNAIEFLLLQASDGIHHWTPPKGHVEPGEDDLETALRETQ
Sbjct: 1   MALRACGLIIFRRCLIPKVDNNAIEFLLLQASDGIHHWTPPKGHVEPGEDDLETALRETQ 60

Query: 61  EEAGIEAGQLTIIEGFKRELNYVARNKPKTVIYWLAEVKDYDVEIRLSHEHQAYRWLGLE 120
           EEAGIEAGQLTIIEGFKRELNYVARNKPKTVIYWLAEVKDYDVEIRLSHEHQAYRWLGLE
Sbjct: 61  EEAGIEAGQLTIIEGFKRELNYVARNKPKTVIYWLAEVKDYDVEIRLSHEHQAYRWLGLE 120

Query: 121 EACQLAQFKEMKAALQEGHQFLCSIEA 147
           EACQLAQFKEMKAALQEGHQFLCSIEA
Sbjct: 121 EACQLAQFKEMKAALQEGHQFLCSIEA 147


>gi|4502125 nudix-type motif 2 [Homo sapiens]
          Length = 147

 Score =  303 bits (777), Expect = 3e-83
 Identities = 147/147 (100%), Positives = 147/147 (100%)

Query: 1   MALRACGLIIFRRCLIPKVDNNAIEFLLLQASDGIHHWTPPKGHVEPGEDDLETALRETQ 60
           MALRACGLIIFRRCLIPKVDNNAIEFLLLQASDGIHHWTPPKGHVEPGEDDLETALRETQ
Sbjct: 1   MALRACGLIIFRRCLIPKVDNNAIEFLLLQASDGIHHWTPPKGHVEPGEDDLETALRETQ 60

Query: 61  EEAGIEAGQLTIIEGFKRELNYVARNKPKTVIYWLAEVKDYDVEIRLSHEHQAYRWLGLE 120
           EEAGIEAGQLTIIEGFKRELNYVARNKPKTVIYWLAEVKDYDVEIRLSHEHQAYRWLGLE
Sbjct: 61  EEAGIEAGQLTIIEGFKRELNYVARNKPKTVIYWLAEVKDYDVEIRLSHEHQAYRWLGLE 120

Query: 121 EACQLAQFKEMKAALQEGHQFLCSIEA 147
           EACQLAQFKEMKAALQEGHQFLCSIEA
Sbjct: 121 EACQLAQFKEMKAALQEGHQFLCSIEA 147


>gi|5729804 nudix-type motif 3 [Homo sapiens]
          Length = 172

 Score = 41.2 bits (95), Expect = 3e-04
 Identities = 27/107 (25%), Positives = 53/107 (49%), Gaps = 11/107 (10%)

Query: 25  EFLLLQASDGIHHWTPPKGHVEPGEDDLETALRETQEEAGIEAGQLTIIEGFKRELNYVA 84
           E LL+ +S     W  P G +EP E+    A+RE  EEAG++     ++  F+ +     
Sbjct: 33  EVLLVSSSRHPDRWIVPGGGMEPEEEPSVAAVREVCEEAGVKGTLGRLVGIFENQ----- 87

Query: 85  RNKPKTVIYWL---AEVKDYDVEIRLSHEHQAYRWLGLEEACQLAQF 128
             K +T +Y L     ++D++  + +  + +   W  +E+A ++ Q+
Sbjct: 88  ERKHRTYVYVLIVTEVLEDWEDSVNIGRKRE---WFKIEDAIKVLQY 131


>gi|40317634 nudix-type motif 4 isoform beta [Homo sapiens]
          Length = 181

 Score = 39.3 bits (90), Expect = 0.001
 Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 11/124 (8%)

Query: 25  EFLLLQASDGIHHWTPPKGHVEPGEDDLETALRETQEEAGIEAGQLTIIEGFKRELNYVA 84
           E LL+ +S     W  P G +EP E+    A+RE  EEAG++     ++  F++  +   
Sbjct: 33  EVLLVSSSRYPDQWIVPGGGMEPEEEPGGAAVREVYEEAGVKGKLGRLLGIFEQNQD--- 89

Query: 85  RNKPKTVIYWLAE---VKDYDVEIRLSHEHQAYRWLGLEEACQLAQ-FKEMKAALQEGHQ 140
             K +T +Y L     ++D++  + +  + +   W  +E+A ++ Q  K + A   E  +
Sbjct: 90  -RKHRTYVYVLTVTEILEDWEDSVNIGRKRE---WFKVEDAIKVLQCHKPVHAEYLEKLK 145

Query: 141 FLCS 144
             CS
Sbjct: 146 LGCS 149


>gi|37221177 nudix-type motif 11 [Homo sapiens]
          Length = 164

 Score = 38.9 bits (89), Expect = 0.002
 Identities = 27/106 (25%), Positives = 53/106 (50%), Gaps = 10/106 (9%)

Query: 25  EFLLLQASDGIHHWTPPKGHVEPGEDDLETALRETQEEAGIEAGQLTIIEGFKRELNYVA 84
           E LL+ +S     W  P G +EP E+    A+RE  EEAG++     ++  F++  +   
Sbjct: 32  EVLLVSSSRYPDRWIVPGGGMEPEEEPGGAAVREVYEEAGVKGKLGRLLGVFEQNQD--- 88

Query: 85  RNKPKTVIYWLAE---VKDYDVEIRLSHEHQAYRWLGLEEACQLAQ 127
             K +T +Y L     ++D++  + +  + +   W  +E+A ++ Q
Sbjct: 89  -RKHRTYVYVLTVTELLEDWEDSVSIGRKRE---WFKVEDAIKVLQ 130


>gi|40317632 nudix-type motif 4 isoform alpha [Homo sapiens]
          Length = 180

 Score = 38.9 bits (89), Expect = 0.002
 Identities = 32/124 (25%), Positives = 59/124 (47%), Gaps = 12/124 (9%)

Query: 25  EFLLLQASDGIHHWTPPKGHVEPGEDDLETALRETQEEAGIEAGQLTIIEGFKRELNYVA 84
           E LL+ +S     W  P G +EP E+    A+RE  EEAG++     ++  F+ +     
Sbjct: 33  EVLLVSSSRYPDQWIVPGGGMEPEEEPGGAAVREVYEEAGVKGKLGRLLGIFENQ----- 87

Query: 85  RNKPKTVIYWLAE---VKDYDVEIRLSHEHQAYRWLGLEEACQLAQ-FKEMKAALQEGHQ 140
             K +T +Y L     ++D++  + +  + +   W  +E+A ++ Q  K + A   E  +
Sbjct: 88  DRKHRTYVYVLTVTEILEDWEDSVNIGRKRE---WFKVEDAIKVLQCHKPVHAEYLEKLK 144

Query: 141 FLCS 144
             CS
Sbjct: 145 LGCS 148


>gi|41393549 nudix-type motif 10 [Homo sapiens]
          Length = 164

 Score = 38.1 bits (87), Expect = 0.003
 Identities = 27/106 (25%), Positives = 53/106 (50%), Gaps = 10/106 (9%)

Query: 25  EFLLLQASDGIHHWTPPKGHVEPGEDDLETALRETQEEAGIEAGQLTIIEGFKRELNYVA 84
           E LL+ +S     W  P G +EP E+    A+RE  EEAG++     ++  F++  +   
Sbjct: 32  EVLLVSSSRYPDRWIVPGGGMEPEEEPGGAAVREVYEEAGVKGKLGRLLGVFEQNQD--- 88

Query: 85  RNKPKTVIYWLAE---VKDYDVEIRLSHEHQAYRWLGLEEACQLAQ 127
             K +T +Y L     ++D++  + +  + +   W  +E+A ++ Q
Sbjct: 89  -PKHRTYVYVLTVTELLEDWEDSVSIGRKRE---WFKVEDAIKVLQ 130


>gi|62543567 nudix (nucleoside diphosphate linked moiety X)-type
           motif 17 [Homo sapiens]
          Length = 328

 Score = 35.4 bits (80), Expect = 0.017
 Identities = 16/32 (50%), Positives = 20/32 (62%)

Query: 38  WTPPKGHVEPGEDDLETALRETQEEAGIEAGQ 69
           W PP GHVE  E+ L+  LRE  EE+G+   Q
Sbjct: 122 WVPPGGHVELEEELLDGGLRELWEESGLHLPQ 153


>gi|20149583 nudix-type motif 6 isoform a [Homo sapiens]
          Length = 316

 Score = 35.0 bits (79), Expect = 0.023
 Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 4/104 (3%)

Query: 20  DNNAIEFLLLQASDGIHH-WTPPKGHVEPGEDDLETALRETQEEAGIEAGQLTIIEGFKR 78
           D +  + L++Q  + + + W  P G  EP ED  +TA+RE  EE GI++   +++   ++
Sbjct: 152 DESTRKILVVQDRNKLKNMWKFPGGLSEPEEDIGDTAVREVFEETGIKSEFRSVLSIRQQ 211

Query: 79  ELNYVARNKPKTVIYWLAEVKDYDVEIRLSHEH-QAYRWLGLEE 121
             N  A    K+ +Y +  +K Y   I    E      W+ L +
Sbjct: 212 HTNPGAFG--KSDMYIICRLKPYSFTINFCQEECLRCEWMDLND 253


>gi|118026927 nudix (nucleoside diphosphate linked moiety X)-type
           motif 18 [Homo sapiens]
          Length = 323

 Score = 35.0 bits (79), Expect = 0.023
 Identities = 17/46 (36%), Positives = 26/46 (56%)

Query: 38  WTPPKGHVEPGEDDLETALRETQEEAGIEAGQLTIIEGFKRELNYV 83
           W  P G +EPGE  +E   RE +EEAG+     T++   +R  ++V
Sbjct: 71  WYLPAGRMEPGETIVEALQREVKEEAGLHCEPETLLSVEERGPSWV 116


>gi|37594461 nudix-type motif 6 isoform b [Homo sapiens]
          Length = 147

 Score = 34.3 bits (77), Expect = 0.038
 Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 3/85 (3%)

Query: 38  WTPPKGHVEPGEDDLETALRETQEEAGIEAGQLTIIEGFKRELNYVARNKPKTVIYWLAE 97
           W  P G  EP ED  +TA+RE  EE GI++   +++   ++  N  A    K+ +Y +  
Sbjct: 2   WKFPGGLSEPEEDIGDTAVREVFEETGIKSEFRSVLSIRQQHTNPGAFG--KSDMYIICR 59

Query: 98  VKDYDVEIRLSHEH-QAYRWLGLEE 121
           +K Y   I    E      W+ L +
Sbjct: 60  LKPYSFTINFCQEECLRCEWMDLND 84


>gi|126012571 heparan sulfate proteoglycan 2 [Homo sapiens]
          Length = 4391

 Score = 31.2 bits (69), Expect = 0.33
 Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 12/63 (19%)

Query: 44   HVEPGEDDLETALRETQEEAG------------IEAGQLTIIEGFKRELNYVARNKPKTV 91
            HV  G    ET+L  T + +G            IE+   T++EG   +LN V   +P+ +
Sbjct: 2601 HVSNGAGSRETSLIVTIQGSGSSHVPSVSPPIRIESSSPTVVEGQTLDLNCVVARQPQAI 2660

Query: 92   IYW 94
            I W
Sbjct: 2661 ITW 2663


>gi|8922792 nudix-type motif 15 [Homo sapiens]
          Length = 164

 Score = 31.2 bits (69), Expect = 0.33
 Identities = 30/117 (25%), Positives = 55/117 (47%), Gaps = 12/117 (10%)

Query: 30  QASDGIHHWTPPKGHVEPGEDDLETALRETQEEAGIEAGQL---TIIEGFKRELNY---V 83
           + S G   +  P GH+E GE   E A RET EEA +    +   +++  F  + NY    
Sbjct: 35  KGSVGAGSFQLPGGHLEFGETWEECAQRETWEEAALHLKNVHFASVVNSFIEKENYHYVT 94

Query: 84  ARNKPKTVIYWLAEVKDYDVEIRLSHEHQAYRWLGLEEACQLAQ-FKEMKAALQEGH 139
              K +  +   +E K+ + E     +++++ W+  EE   L Q F  ++   ++G+
Sbjct: 95  ILMKGEVDVTHDSEPKNVEPE-----KNESWEWVPWEELPPLDQLFWGLRCLKEQGY 146


>gi|67782311 superkiller viralicidic activity 2-like homolog [Homo
           sapiens]
          Length = 1246

 Score = 30.8 bits (68), Expect = 0.42
 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)

Query: 41  PKGHVEPGEDDLETALRETQEEAGIEAGQLTIIEGFKRELNYVARNKP 88
           P G  EP   DL T   E +EE   E   LTI  GFK+ +++  ++ P
Sbjct: 156 PGGMDEPTITDLNTR-EEAEEEIDFEKDLLTIPPGFKKGMDFAPKDCP 202


>gi|157785656 nudix motif 7 [Homo sapiens]
          Length = 238

 Score = 30.8 bits (68), Expect = 0.42
 Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)

Query: 41  PKGHVEPGE-DDLETALRETQEEAGIEAGQLTII 73
           P G  +P + DD  TALRE QEE G+   Q+ ++
Sbjct: 74  PGGKRDPTDMDDAATALREAQEEVGLRPHQVEVV 107


>gi|13899267 nudix-type motif 12 [Homo sapiens]
          Length = 462

 Score = 29.6 bits (65), Expect = 0.95
 Identities = 11/31 (35%), Positives = 19/31 (61%)

Query: 43  GHVEPGEDDLETALRETQEEAGIEAGQLTII 73
           G +EPGE   +   RE +EE+G++ G +  +
Sbjct: 355 GFIEPGETIEDAVRREVEEESGVKVGHVQYV 385


>gi|37594457 nudix-type motif 9 isoform b [Homo sapiens]
          Length = 300

 Score = 28.5 bits (62), Expect = 2.1
 Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 4/64 (6%)

Query: 17  PKVDNNAIEFLLLQASDGIHHWTPPKGHVEPGEDDLETALRETQEEAGIEAGQLTIIEGF 76
           P    + ++F+ ++  D    W  P G V+PGE    T  RE  EEA + + Q T  E  
Sbjct: 140 PVSGKHILQFVAIKRKD-CGEWAIPGGMVDPGEKISATLKREFGEEA-LNSLQKTSAE-- 195

Query: 77  KREL 80
           KRE+
Sbjct: 196 KREI 199


>gi|13129010 nudix-type motif 9 isoform a [Homo sapiens]
          Length = 350

 Score = 28.5 bits (62), Expect = 2.1
 Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 4/64 (6%)

Query: 17  PKVDNNAIEFLLLQASDGIHHWTPPKGHVEPGEDDLETALRETQEEAGIEAGQLTIIEGF 76
           P    + ++F+ ++  D    W  P G V+PGE    T  RE  EEA + + Q T  E  
Sbjct: 190 PVSGKHILQFVAIKRKD-CGEWAIPGGMVDPGEKISATLKREFGEEA-LNSLQKTSAE-- 245

Query: 77  KREL 80
           KRE+
Sbjct: 246 KREI 249


>gi|209364550 suppressor of S. cerevisiae gcr2 isoform 3 [Homo
           sapiens]
          Length = 601

 Score = 28.1 bits (61), Expect = 2.8
 Identities = 10/28 (35%), Positives = 20/28 (71%)

Query: 15  LIPKVDNNAIEFLLLQASDGIHHWTPPK 42
           L+ ++++N  EFLL++A+D +  W  P+
Sbjct: 105 LVARIEDNDGEFLLIEAADFLPKWLDPE 132


>gi|209364547 suppressor of S. cerevisiae gcr2 isoform 2 [Homo
           sapiens]
          Length = 677

 Score = 28.1 bits (61), Expect = 2.8
 Identities = 10/28 (35%), Positives = 20/28 (71%)

Query: 15  LIPKVDNNAIEFLLLQASDGIHHWTPPK 42
           L+ ++++N  EFLL++A+D +  W  P+
Sbjct: 105 LVARIEDNDGEFLLIEAADFLPKWLDPE 132


>gi|6005784 suppressor of S. cerevisiae gcr2 isoform 1 [Homo
           sapiens]
          Length = 644

 Score = 28.1 bits (61), Expect = 2.8
 Identities = 10/28 (35%), Positives = 20/28 (71%)

Query: 15  LIPKVDNNAIEFLLLQASDGIHHWTPPK 42
           L+ ++++N  EFLL++A+D +  W  P+
Sbjct: 105 LVARIEDNDGEFLLIEAADFLPKWLDPE 132


>gi|32469515 nudix-type motif 8 [Homo sapiens]
          Length = 140

 Score = 28.1 bits (61), Expect = 2.8
 Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 1/26 (3%)

Query: 41 PKGHVEPGEDDL-ETALRETQEEAGI 65
          P G  +P + D+  TALRET+EE G+
Sbjct: 67 PGGKCDPADQDVVHTALRETREELGL 92


>gi|55770834 centromere protein F [Homo sapiens]
          Length = 3114

 Score = 27.7 bits (60), Expect = 3.6
 Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 1/41 (2%)

Query: 27   LLLQASDGIHHWTPPKGHVEPGEDDLETALRETQEEAGIEA 67
            +L Q  +  HH    KG VE  E +LE A R  QE A +EA
Sbjct: 2320 VLQQLKESEHHADLLKGRVENLERELEIA-RTNQEHAALEA 2359


>gi|154277118 spectrin repeat containing, nuclear envelope 1 isoform
           4 [Homo sapiens]
          Length = 3321

 Score = 27.3 bits (59), Expect = 4.7
 Identities = 23/94 (24%), Positives = 39/94 (41%), Gaps = 7/94 (7%)

Query: 59  TQEEAGIEAGQLTIIEGFKRELNYVARNKPKTVIYWLAEVKDYDVEIRLSHEHQAYRWLG 118
           T++EA   AG+L  ++G   EL     +K   +     E ++ DV++  +       WL 
Sbjct: 682 TKDEAEQLAGKLRRLKGSLLELQRALHDKQLNMQGTAQEKEESDVDLTATQSPGVQEWLA 741

Query: 119 -------LEEACQLAQFKEMKAALQEGHQFLCSI 145
                   +    L Q KE++  L E    L S+
Sbjct: 742 QARTTWTQQRQSSLQQQKELEQELAEQKSLLRSV 775


>gi|23097308 spectrin repeat containing, nuclear envelope 1 isoform 2
            [Homo sapiens]
          Length = 8749

 Score = 27.3 bits (59), Expect = 4.7
 Identities = 23/94 (24%), Positives = 39/94 (41%), Gaps = 7/94 (7%)

Query: 59   TQEEAGIEAGQLTIIEGFKRELNYVARNKPKTVIYWLAEVKDYDVEIRLSHEHQAYRWLG 118
            T++EA   AG+L  ++G   EL     +K   +     E ++ DV++  +       WL 
Sbjct: 6087 TKDEAEQLAGKLRRLKGSLLELQRALHDKQLNMQGTAQEKEESDVDLTATQSPGVQEWLA 6146

Query: 119  -------LEEACQLAQFKEMKAALQEGHQFLCSI 145
                    +    L Q KE++  L E    L S+
Sbjct: 6147 QARTTWTQQRQSSLQQQKELEQELAEQKSLLRSV 6180


>gi|154277116 spectrin repeat containing, nuclear envelope 1 isoform 1
            [Homo sapiens]
          Length = 8797

 Score = 27.3 bits (59), Expect = 4.7
 Identities = 23/94 (24%), Positives = 39/94 (41%), Gaps = 7/94 (7%)

Query: 59   TQEEAGIEAGQLTIIEGFKRELNYVARNKPKTVIYWLAEVKDYDVEIRLSHEHQAYRWLG 118
            T++EA   AG+L  ++G   EL     +K   +     E ++ DV++  +       WL 
Sbjct: 6158 TKDEAEQLAGKLRRLKGSLLELQRALHDKQLNMQGTAQEKEESDVDLTATQSPGVQEWLA 6217

Query: 119  -------LEEACQLAQFKEMKAALQEGHQFLCSI 145
                    +    L Q KE++  L E    L S+
Sbjct: 6218 QARTTWTQQRQSSLQQQKELEQELAEQKSLLRSV 6251


>gi|121949802 cancer/testis antigen family 47, member A1 [Homo
           sapiens]
          Length = 288

 Score = 26.9 bits (58), Expect = 6.1
 Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 8/69 (11%)

Query: 41  PKGHVEPGEDDLETALRETQEEAGIEAGQLTIIEGFKRELNYVARNKPKTVIYWLAEVKD 100
           P+G     + D+  A  E +EE G EA           +L  VAR  P + I+++     
Sbjct: 76  PRGGSAEEDSDIGPATEEEEEEEGNEAANF--------DLAVVARRYPASGIHFVLLDMV 127

Query: 101 YDVEIRLSH 109
           + +  RLSH
Sbjct: 128 HSLLHRLSH 136


>gi|121949798 cancer/testis antigen family 47, member A2 [Homo
           sapiens]
          Length = 288

 Score = 26.9 bits (58), Expect = 6.1
 Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 8/69 (11%)

Query: 41  PKGHVEPGEDDLETALRETQEEAGIEAGQLTIIEGFKRELNYVARNKPKTVIYWLAEVKD 100
           P+G     + D+  A  E +EE G EA           +L  VAR  P + I+++     
Sbjct: 76  PRGGSAEEDSDIGPATEEEEEEEGNEAANF--------DLAVVARRYPASGIHFVLLDMV 127

Query: 101 YDVEIRLSH 109
           + +  RLSH
Sbjct: 128 HSLLHRLSH 136


>gi|121949773 cancer/testis antigen family 47, member A3 [Homo
           sapiens]
          Length = 288

 Score = 26.9 bits (58), Expect = 6.1
 Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 8/69 (11%)

Query: 41  PKGHVEPGEDDLETALRETQEEAGIEAGQLTIIEGFKRELNYVARNKPKTVIYWLAEVKD 100
           P+G     + D+  A  E +EE G EA           +L  VAR  P + I+++     
Sbjct: 76  PRGGSAEEDSDIGPATEEEEEEEGNEAANF--------DLAVVARRYPASGIHFVLLDMV 127

Query: 101 YDVEIRLSH 109
           + +  RLSH
Sbjct: 128 HSLLHRLSH 136


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.137    0.419 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,697,761
Number of Sequences: 37866
Number of extensions: 229407
Number of successful extensions: 711
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 691
Number of HSP's gapped (non-prelim): 46
length of query: 147
length of database: 18,247,518
effective HSP length: 93
effective length of query: 54
effective length of database: 14,725,980
effective search space: 795202920
effective search space used: 795202920
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
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