Guide to the Human Genome
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Name: SLC26A10 Sequence: fasta or formatted (563aa) NCBI GI: 65506789
Description:

solute carrier family 26, member 10

Referenced in:

Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.6         54           3
 C cysteine            2.0         11           1
 D aspartate           3.0         17           1
 E glutamate           3.4         19           1
 F phenylalanine       5.2         29           2
 G glycine             7.5         42           2
 H histidine           1.2          7           1
 I isoleucine          3.2         18           1
 K lysine              2.3         13           1
 L leucine            17.2         97           3
 M methionine          1.6          9           1
 N asparagine          1.8         10           1
 P proline             6.4         36           2
 Q glutamine           4.1         23           1
 R arginine            5.0         28           1
 S serine             10.3         58           2
 T threonine           5.2         29           2
 V valine              8.7         49           3
 W tryptophan          0.7          4           1
 Y tyrosine            1.8         10           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 26, member 10 
SLC26A7               0.255   solute carrier family 26, member 7 isoform a 
SLC26A7               0.255   solute carrier family 26, member 7 isoform b 
SLC26A6               0.238   solute carrier family 26, member 6 isoform 4 
SLC26A6               0.238   solute carrier family 26, member 6 isoform 3 
SLC26A6               0.238   solute carrier family 26, member 6 isoform 2 
SLC26A6               0.238   solute carrier family 26, member 6 isoform 1 
SLC26A4               0.236   pendrin 
SLC26A3               0.221   solute carrier family 26, member 3 
SLC26A5               0.219   prestin isoform c 
SLC26A5               0.219   prestin isoform b 
SLC26A5               0.219   prestin isoform a 
SLC26A2               0.208   solute carrier family 26 member 2 
SLC26A1               0.201   solute carrier family 26, member 1 isoform a 
SLC26A1               0.201   solute carrier family 26, member 1 isoform a 
SLC26A9               0.191   solute carrier family 26, member 9 isoform a 
SLC26A9               0.191   solute carrier family 26, member 9 isoform b 
SLC26A5               0.132   prestin isoform d 
SLC26A8               0.124   solute carrier family 26, member 8 isoform a 
SLC26A11              0.100   solute carrier family 26, member 11 
SLC26A8               0.062   solute carrier family 26, member 8 isoform b 
SLC26A9               0.052   solute carrier family 26, member 9 isoform c 
SLC26A1               0.039   solute carrier family 26, member 1 isoform b 
SLAIN1                0.005   SLAIN motif family, member 1 A 
SLAIN1                0.005   SLAIN motif family, member 1 B 
FANCI                 0.005   Fanconi anemia, complementation group I isoform 1 [...
FANCI                 0.005   Fanconi anemia, complementation group I isoform 2 [H...
SLC12A9               0.005   solute carrier family 12 (potassium/chloride transpo...
ASTE1                 0.005   asteroid homolog 1 
DNHD1                 0.005   dynein heavy chain domain 1 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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