Guide to the Human Genome
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Name: ASB18 Sequence: fasta or formatted (466aa) NCBI GI: 157743292
Description:

ankyrin repeat and SOCS box-containing 18

Referenced in:

Ankyrin Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.8         55           3
 C cysteine            3.9         18           1
 D aspartate           6.4         30           2
 E glutamate           5.2         24           2
 F phenylalanine       2.4         11           2
 G glycine             7.5         35           2
 H histidine           4.5         21           1
 I isoleucine          1.7          8           1
 K lysine              3.2         15           1
 L leucine            15.9         74           3
 M methionine          1.3          6           1
 N asparagine          1.9          9           1
 P proline             6.4         30           1
 Q glutamine           3.9         18           1
 R arginine            7.3         34           2
 S serine              5.2         24           1
 T threonine           3.9         18           2
 V valine              4.9         23           2
 W tryptophan          1.1          5           1
 Y tyrosine            1.7          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ankyrin repeat and SOCS box-containing 18 
ASB10                 0.321   ankyrin repeat and SOCS box-containing 10 isoform 3...
ASB10                 0.315   ankyrin repeat and SOCS box-containing 10 isoform 1...
ASB16                 0.279   ankyrin repeat and SOCS box-containing protein 16 [H...
ASB10                 0.273   ankyrin repeat and SOCS box-containing 10 isoform 2...
ASB4                  0.234   ankyrin repeat and SOCS box-containing protein 4 isof...
ASB4                  0.142   ankyrin repeat and SOCS box-containing protein 4 iso...
ANK2                  0.090   ankyrin 2 isoform 3 
ANK2                  0.090   ankyrin 2 isoform 2 
ANK2                  0.090   ankyrin 2 isoform 1 
LOC441869             0.087   hypothetical protein LOC441869 
ASB9                  0.083   ankyrin repeat and SOCS box-containing 9 isoform 2 [...
ASB9                  0.083   ankyrin repeat and SOCS box-containing 9 isoform 1 [...
ANKRD35               0.077   ankyrin repeat domain 35 
ANK1                  0.077   ankyrin 1 isoform 9 
ANK1                  0.077   ankyrin 1 isoform 1 
ANK1                  0.077   ankyrin 1 isoform 3 
ANK1                  0.077   ankyrin 1 isoform 2 
ANK1                  0.077   ankyrin 1 isoform 4 
TNKS2                 0.076   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
ANKRD17               0.075   ankyrin repeat domain protein 17 isoform a 
ANKRD17               0.075   ankyrin repeat domain protein 17 isoform b 
ANK3                  0.074   ankyrin 3 isoform 1 
TNKS                  0.074   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
ANKRD50               0.073   ankyrin repeat domain 50 
ANKK1                 0.072   ankyrin repeat and kinase domain containing 1 
ANKRD28               0.067   ankyrin repeat domain 28 
ANKRD44               0.067   ankyrin repeat domain 44 
ASB7                  0.064   ankyrin repeat and SOCS box-containing protein 7 iso...
ASB7                  0.064   ankyrin repeat and SOCS box-containing protein 7 iso...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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