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Search of human proteins with 22202633
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|22202633 prefoldin subunit 5 isoform alpha [Homo sapiens]
(154 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|22202633 prefoldin subunit 5 isoform alpha [Homo sapiens] 298 1e-81
gi|22202637 prefoldin subunit 5 isoform gamma [Homo sapiens] 192 7e-50
gi|19924159 RPB5-mediating protein isoform a [Homo sapiens] 35 0.025
gi|4758648 kinesin family member 5B [Homo sapiens] 35 0.033
gi|38044112 restin isoform b [Homo sapiens] 32 0.22
gi|4506751 restin isoform a [Homo sapiens] 32 0.22
gi|34577114 cytomatrix protein p110 [Homo sapiens] 31 0.48
gi|216548091 leucine zipper protein 1 [Homo sapiens] 30 0.63
gi|216548085 leucine zipper protein 1 [Homo sapiens] 30 0.63
gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin ... 30 0.82
gi|55749932 desmin [Homo sapiens] 30 1.1
gi|98991769 taspase 1 precursor [Homo sapiens] 29 1.4
gi|19924161 RPB5-mediating protein isoform b [Homo sapiens] 29 1.4
gi|201860300 aryl hydrocarbon receptor interacting protein [Homo... 29 1.8
gi|239753269 PREDICTED: upstream binding transcription factor, R... 29 1.8
gi|239747816 PREDICTED: upstream binding transcription factor, R... 29 1.8
gi|239741686 PREDICTED: upstream binding transcription factor, R... 29 1.8
gi|4557701 keratin 17 [Homo sapiens] 29 1.8
gi|38202205 zinc finger, FYVE domain containing 26 [Homo sapiens] 29 1.8
gi|218083800 Rho GTPase-activating protein isoform 1 [Homo sapiens] 28 2.4
gi|112789550 poly (ADP-ribose) polymerase family, member 4 [Homo... 28 2.4
gi|148762940 DVL-binding protein DAPLE [Homo sapiens] 28 2.4
gi|64085252 hypothetical protein LOC145508 [Homo sapiens] 28 3.1
gi|4758906 serpin peptidase inhibitor, clade B, member 9 [Homo s... 28 4.1
gi|169218211 PREDICTED: similar to plectin 1, partial [Homo sapi... 28 4.1
gi|119964721 fer (fps/fes related) tyrosine kinase [Homo sapiens] 28 4.1
gi|31377468 dedicator of cytokinesis 2 [Homo sapiens] 28 4.1
gi|41322923 plectin 1 isoform 11 [Homo sapiens] 28 4.1
gi|41322914 plectin 1 isoform 10 [Homo sapiens] 28 4.1
gi|41322919 plectin 1 isoform 8 [Homo sapiens] 28 4.1
>gi|22202633 prefoldin subunit 5 isoform alpha [Homo sapiens]
Length = 154
Score = 298 bits (763), Expect = 1e-81
Identities = 154/154 (100%), Positives = 154/154 (100%)
Query: 1 MAQSINITELNLPQLEMLKNQLDQEVEFLSTSIAQLKVVQTKYVEAKDCLNVLNKSNEGK 60
MAQSINITELNLPQLEMLKNQLDQEVEFLSTSIAQLKVVQTKYVEAKDCLNVLNKSNEGK
Sbjct: 1 MAQSINITELNLPQLEMLKNQLDQEVEFLSTSIAQLKVVQTKYVEAKDCLNVLNKSNEGK 60
Query: 61 ELLVPLTSSMYVPGKLHDVEHVLIDVGTGYYVEKTAEDAKDFFKRKIDFLTKQMEKIQPA 120
ELLVPLTSSMYVPGKLHDVEHVLIDVGTGYYVEKTAEDAKDFFKRKIDFLTKQMEKIQPA
Sbjct: 61 ELLVPLTSSMYVPGKLHDVEHVLIDVGTGYYVEKTAEDAKDFFKRKIDFLTKQMEKIQPA 120
Query: 121 LQEKHAMKQAVMEMMSQKIQQLTALGAAQATAKA 154
LQEKHAMKQAVMEMMSQKIQQLTALGAAQATAKA
Sbjct: 121 LQEKHAMKQAVMEMMSQKIQQLTALGAAQATAKA 154
>gi|22202637 prefoldin subunit 5 isoform gamma [Homo sapiens]
Length = 109
Score = 192 bits (489), Expect = 7e-50
Identities = 109/154 (70%), Positives = 109/154 (70%), Gaps = 45/154 (29%)
Query: 1 MAQSINITELNLPQLEMLKNQLDQEVEFLSTSIAQLKVVQTKYVEAKDCLNVLNKSNEGK 60
MAQSINITELNLPQLEMLKNQLDQ
Sbjct: 1 MAQSINITELNLPQLEMLKNQLDQ------------------------------------ 24
Query: 61 ELLVPLTSSMYVPGKLHDVEHVLIDVGTGYYVEKTAEDAKDFFKRKIDFLTKQMEKIQPA 120
MYVPGKLHDVEHVLIDVGTGYYVEKTAEDAKDFFKRKIDFLTKQMEKIQPA
Sbjct: 25 ---------MYVPGKLHDVEHVLIDVGTGYYVEKTAEDAKDFFKRKIDFLTKQMEKIQPA 75
Query: 121 LQEKHAMKQAVMEMMSQKIQQLTALGAAQATAKA 154
LQEKHAMKQAVMEMMSQKIQQLTALGAAQATAKA
Sbjct: 76 LQEKHAMKQAVMEMMSQKIQQLTALGAAQATAKA 109
>gi|19924159 RPB5-mediating protein isoform a [Homo sapiens]
Length = 535
Score = 35.0 bits (79), Expect = 0.025
Identities = 26/123 (21%), Positives = 53/123 (43%), Gaps = 8/123 (6%)
Query: 7 ITELNLPQLEMLKNQLDQEVEFLSTSIAQLKVVQTKYVEAKDCLNVLNKSNEGKELLVPL 66
+ L P + L+ + ++ V I K V Y ++ L+ L ++VP
Sbjct: 22 LVPLRAPDVARLREEQEKVVTNCQERIQHWKKVDNDYNALRERLSTL-PDKLSYNIMVPF 80
Query: 67 TSSMYVPGKLHDVEHVLIDVGTGYYVEKTAEDA-------KDFFKRKIDFLTKQMEKIQP 119
++PGKL V + +G ++ + +A+ A K+ ++ ID L K M+ +
Sbjct: 81 GPFAFMPGKLVHTNEVTVLLGDNWFAKCSAKQAVGLVEHRKEHVRKTIDDLKKVMKNFES 140
Query: 120 ALQ 122
++
Sbjct: 141 RVE 143
>gi|4758648 kinesin family member 5B [Homo sapiens]
Length = 963
Score = 34.7 bits (78), Expect = 0.033
Identities = 32/140 (22%), Positives = 59/140 (42%), Gaps = 24/140 (17%)
Query: 12 LPQLEMLKNQLDQEVEFLSTSIAQLKVVQTKYVEAKDCLNVLNKSNEGKELLVPLTSSMY 71
L +E K QL++ V+ LS + QL+ + + K+ LN + +NE K+ + S
Sbjct: 650 LQNVEQKKRQLEESVDALSEELVQLRAQEKVHEMEKEHLNKVQTANEVKQAVEQQIQS-- 707
Query: 72 VPGKLHDVEHVLIDVGTGYYVEKTAEDAKDFFKRKIDFLT------KQMEKIQPALQEKH 125
H H +K +D + K +T ++M Q L+ +H
Sbjct: 708 -----HRETH-----------QKQISSLRDEVEAKAKLITDLQDQNQKMMLEQERLRVEH 751
Query: 126 AMKQAVMEMMSQKIQQLTAL 145
+A + S+K+ +LT +
Sbjct: 752 EKLKATDQEKSRKLHELTVM 771
>gi|38044112 restin isoform b [Homo sapiens]
Length = 1392
Score = 32.0 bits (71), Expect = 0.22
Identities = 29/138 (21%), Positives = 67/138 (48%), Gaps = 19/138 (13%)
Query: 9 ELNLPQLEMLKNQLDQEVEFLSTSIAQLKVVQTKYVEAKDCLNVLNK-SNEGKELLVPLT 67
E+ + +LE+L+ + +++ + + +QLK + K ++ L+ L K S+EGK + L
Sbjct: 693 EIKVKELEVLQAKCNEQTKVIDNFTSQLKATEEKLLD----LDALRKASSEGKSEMKKLR 748
Query: 68 SSMYVPGKLHDVEHVLIDVGTGYYVEKTAEDAK-DFFKRKIDFLTKQMEKIQPALQEKHA 126
+ K ++H+ +EK AE +K R++ ++ +Q L E
Sbjct: 749 QQLEAAEK--QIKHL--------EIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQ 798
Query: 127 MKQAV---MEMMSQKIQQ 141
+K+ + ++++ +K +
Sbjct: 799 VKETLEKELQILKEKFAE 816
>gi|4506751 restin isoform a [Homo sapiens]
Length = 1427
Score = 32.0 bits (71), Expect = 0.22
Identities = 29/138 (21%), Positives = 67/138 (48%), Gaps = 19/138 (13%)
Query: 9 ELNLPQLEMLKNQLDQEVEFLSTSIAQLKVVQTKYVEAKDCLNVLNK-SNEGKELLVPLT 67
E+ + +LE+L+ + +++ + + +QLK + K ++ L+ L K S+EGK + L
Sbjct: 728 EIKVKELEVLQAKCNEQTKVIDNFTSQLKATEEKLLD----LDALRKASSEGKSEMKKLR 783
Query: 68 SSMYVPGKLHDVEHVLIDVGTGYYVEKTAEDAK-DFFKRKIDFLTKQMEKIQPALQEKHA 126
+ K ++H+ +EK AE +K R++ ++ +Q L E
Sbjct: 784 QQLEAAEK--QIKHL--------EIEKNAESSKASSITRELQGRELKLTNLQENLSEVSQ 833
Query: 127 MKQAV---MEMMSQKIQQ 141
+K+ + ++++ +K +
Sbjct: 834 VKETLEKELQILKEKFAE 851
>gi|34577114 cytomatrix protein p110 [Homo sapiens]
Length = 957
Score = 30.8 bits (68), Expect = 0.48
Identities = 35/171 (20%), Positives = 70/171 (40%), Gaps = 24/171 (14%)
Query: 3 QSINITELNLPQLEMLKNQLDQEVEFLSTSIAQLKVVQTKY-------VEAKDCLNVLNK 55
+ I E+ + +K ++DQ + LS ++L +QTK + K + VL +
Sbjct: 417 EEIKQIEVYKSHSKFMKTKIDQLKQELSKKESELLALQTKLETLSNQNSDCKQHIEVLKE 476
Query: 56 SNEGKELLVPLTSS-------------MYVPGKLHDVEHVLIDVGTGYYVEKTAEDAKDF 102
S KE + + ++ K ++ + + GT + +D +
Sbjct: 477 SLTAKEQRAAILQTEVDALRLRLEEKESFLNKKTKQLQDLTEEKGTLAGEIRDMKDMLEV 536
Query: 103 FKRKIDFLTKQMEKIQPALQEKHA----MKQAVMEMMSQKIQQLTALGAAQ 149
+RKI+ L K++E +Q L++K +K V + + TAL +
Sbjct: 537 KERKINVLQKKIENLQEQLRDKDKQLTNLKDRVKSLQTDSSNTDTALATLE 587
>gi|216548091 leucine zipper protein 1 [Homo sapiens]
Length = 1076
Score = 30.4 bits (67), Expect = 0.63
Identities = 16/70 (22%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 1 MAQSINITELNLPQLEMLKNQLDQEVEFLSTSIAQLKVVQTKYVEAKDCLNVLNKSNEGK 60
++ + + + + +LE +++LD+ + L++ + +LK + +V + LN K NE
Sbjct: 151 ISSELEMLRVKVKELESSEDRLDKTEQSLASELEKLKSLTLSFVSERKYLNEKEKENE-- 208
Query: 61 ELLVPLTSSM 70
+L+ LT +
Sbjct: 209 KLIKELTQKL 218
>gi|216548085 leucine zipper protein 1 [Homo sapiens]
Length = 1076
Score = 30.4 bits (67), Expect = 0.63
Identities = 16/70 (22%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 1 MAQSINITELNLPQLEMLKNQLDQEVEFLSTSIAQLKVVQTKYVEAKDCLNVLNKSNEGK 60
++ + + + + +LE +++LD+ + L++ + +LK + +V + LN K NE
Sbjct: 151 ISSELEMLRVKVKELESSEDRLDKTEQSLASELEKLKSLTLSFVSERKYLNEKEKENE-- 208
Query: 61 ELLVPLTSSM 70
+L+ LT +
Sbjct: 209 KLIKELTQKL 218
>gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin
(with transmembrane signal), 1 [Homo sapiens]
Length = 3259
Score = 30.0 bits (66), Expect = 0.82
Identities = 31/136 (22%), Positives = 63/136 (46%), Gaps = 19/136 (13%)
Query: 12 LPQLEMLKNQLDQEVEFLSTSIAQLKVVQTKYVEAKDCLNVLNKSNEGKELLVPLTSSMY 71
+ + M+K QL ++ EF+ST AQL Q + + V+ + + E V
Sbjct: 182 MEEFVMMKQQLQEKEEFISTLQAQLSQTQAEQAAQQ----VVREKDARFETQV------- 230
Query: 72 VPGKLHDVEHVLIDVGTGYYVEKTAEDAKDFFKRKIDFLTKQM---EKIQPALQEKHAMK 128
+LH+ E L+ + T VE + +RK++ + + ++ LQ++
Sbjct: 231 ---RLHEDE--LLQLVTQADVETEMQQKLRVLQRKLEEHEESLVGRAQVVDLLQQELTAA 285
Query: 129 QAVMEMMSQKIQQLTA 144
+ +++SQ++QQ+ A
Sbjct: 286 EQRNQILSQQLQQMEA 301
>gi|55749932 desmin [Homo sapiens]
Length = 470
Score = 29.6 bits (65), Expect = 1.1
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 20/121 (16%)
Query: 22 LDQEVEFLSTSIAQLKVVQTKYVEAKDCLNVLNKSNEGKELLVPLTSSMYVPGKLHDVEH 81
L++ +E L+ IA LK V + + + +E V + M P D+
Sbjct: 225 LERRIESLNEEIAFLKKVHEEEIRELQA--------QLQEQQVQVEMDMSKP----DLTA 272
Query: 82 VLIDVGTGY--YVEKTAEDAKDFFKRKIDFLTKQMEKIQPALQEKHAMKQAVMEMMSQKI 139
L D+ Y K +A++++K K+ LT Q A + A++QA EMM +
Sbjct: 273 ALRDIRAQYETIAAKNISEAEEWYKSKVSDLT------QAANKNNDALRQAKQEMMEYRH 326
Query: 140 Q 140
Q
Sbjct: 327 Q 327
>gi|98991769 taspase 1 precursor [Homo sapiens]
Length = 420
Score = 29.3 bits (64), Expect = 1.4
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 82 VLIDVGTGYYVEKTAEDAKDFFKRKIDFLTKQMEKIQPALQEKHAMKQAVMEM 134
VL+ G GY+ E A++ K KR K +EK+Q A+ A++E+
Sbjct: 44 VLVHAGAGYHSESKAKEYKHVCKRACQ---KAIEKLQAGALATDAVTAALVEL 93
>gi|19924161 RPB5-mediating protein isoform b [Homo sapiens]
Length = 495
Score = 29.3 bits (64), Expect = 1.4
Identities = 16/68 (23%), Positives = 34/68 (50%), Gaps = 7/68 (10%)
Query: 62 LLVPLTSSMYVPGKLHDVEHVLIDVGTGYYVEKTAEDA-------KDFFKRKIDFLTKQM 114
++VP ++PGKL V + +G ++ + +A+ A K+ ++ ID L K M
Sbjct: 36 IMVPFGPFAFMPGKLVHTNEVTVLLGDNWFAKCSAKQAVGLVEHRKEHVRKTIDDLKKVM 95
Query: 115 EKIQPALQ 122
+ + ++
Sbjct: 96 KNFESRVE 103
>gi|201860300 aryl hydrocarbon receptor interacting protein [Homo
sapiens]
Length = 330
Score = 28.9 bits (63), Expect = 1.8
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 21 QLDQEVEFLSTSIAQLKVVQTKYVEAKD-CLNVLNKSNE 58
QLDQ++ L + Q K+V +Y E D C ++LNK ++
Sbjct: 225 QLDQQITPLLLNYCQCKLVVEEYYEVLDHCSSILNKYDD 263
>gi|239753269 PREDICTED: upstream binding transcription factor, RNA
polymerase I-like 6 [Homo sapiens]
Length = 400
Score = 28.9 bits (63), Expect = 1.8
Identities = 31/132 (23%), Positives = 54/132 (40%), Gaps = 20/132 (15%)
Query: 29 LSTSIAQLKVVQTKYVEAKDCLNVLNKSNEG-------KELLV----------PLTSSMY 71
+S S+ + ++ +EAK C+ NKS +G K LL P S MY
Sbjct: 70 ISCSLRKFSTLKKLVLEAKKCVKNTNKSQKGRNHPDFPKRLLTAYIRFFKENWPQYSQMY 129
Query: 72 VPGKLHDVEHVLIDVGTGYYVEKTAEDAKDFFKRKIDFLTK--QMEKIQPALQEKHAMKQ 129
+ +V +L + + +DF K K +F K + + P L +K K
Sbjct: 130 PGMRSQEVTKILSKKYKELPEQMKQKHIQDFRKEKQEFEEKLARFREEHPDLDQK-GKKS 188
Query: 130 AVMEMMSQKIQQ 141
+ + + K+Q+
Sbjct: 189 DICKRVQTKVQK 200
>gi|239747816 PREDICTED: upstream binding transcription factor, RNA
polymerase I-like 6 [Homo sapiens]
Length = 400
Score = 28.9 bits (63), Expect = 1.8
Identities = 31/132 (23%), Positives = 54/132 (40%), Gaps = 20/132 (15%)
Query: 29 LSTSIAQLKVVQTKYVEAKDCLNVLNKSNEG-------KELLV----------PLTSSMY 71
+S S+ + ++ +EAK C+ NKS +G K LL P S MY
Sbjct: 70 ISCSLRKFSTLKKLVLEAKKCVKNTNKSQKGRNHPDFPKRLLTAYIRFFKENWPQYSQMY 129
Query: 72 VPGKLHDVEHVLIDVGTGYYVEKTAEDAKDFFKRKIDFLTK--QMEKIQPALQEKHAMKQ 129
+ +V +L + + +DF K K +F K + + P L +K K
Sbjct: 130 PGMRSQEVTKILSKKYKELPEQMKQKHIQDFRKEKQEFEEKLARFREEHPDLDQK-GKKS 188
Query: 130 AVMEMMSQKIQQ 141
+ + + K+Q+
Sbjct: 189 DICKRVQTKVQK 200
>gi|239741686 PREDICTED: upstream binding transcription factor, RNA
polymerase I-like 6 [Homo sapiens]
Length = 400
Score = 28.9 bits (63), Expect = 1.8
Identities = 31/132 (23%), Positives = 54/132 (40%), Gaps = 20/132 (15%)
Query: 29 LSTSIAQLKVVQTKYVEAKDCLNVLNKSNEG-------KELLV----------PLTSSMY 71
+S S+ + ++ +EAK C+ NKS +G K LL P S MY
Sbjct: 70 ISCSLRKFSTLKKLVLEAKKCVKNTNKSQKGRNHPDFPKRLLTAYIRFFKENWPQYSQMY 129
Query: 72 VPGKLHDVEHVLIDVGTGYYVEKTAEDAKDFFKRKIDFLTK--QMEKIQPALQEKHAMKQ 129
+ +V +L + + +DF K K +F K + + P L +K K
Sbjct: 130 PGMRSQEVTKILSKKYKELPEQMKQKHIQDFRKEKQEFEEKLARFREEHPDLDQK-GKKS 188
Query: 130 AVMEMMSQKIQQ 141
+ + + K+Q+
Sbjct: 189 DICKRVQTKVQK 200
>gi|4557701 keratin 17 [Homo sapiens]
Length = 432
Score = 28.9 bits (63), Expect = 1.8
Identities = 32/136 (23%), Positives = 62/136 (45%), Gaps = 22/136 (16%)
Query: 12 LPQLEMLKNQLDQEVEFLSTSIAQLKVVQTKYVEAKDCLNVLNKSNEGKELLVPLTSSMY 71
L +L + + L+ ++E L +A LK + + A + G E+ V + ++
Sbjct: 194 LDELTLARADLEMQIENLKEELAYLKKNHEEEMNAL-------RGQVGGEINVEMDAA-- 244
Query: 72 VPGKLHDVEHVLIDVGTGY--YVEKTAEDAKDFFKRKIDFLTKQM----EKIQPALQE-- 123
PG D+ +L ++ Y EK +DA+D+F K + L +++ E +Q E
Sbjct: 245 -PGV--DLSRILNEMRDQYEKMAEKNRKDAEDWFFSKTEELNREVATNSELVQSGKSEIS 301
Query: 124 --KHAMKQAVMEMMSQ 137
+ M+ +E+ SQ
Sbjct: 302 ELRRTMQALEIELQSQ 317
>gi|38202205 zinc finger, FYVE domain containing 26 [Homo sapiens]
Length = 2539
Score = 28.9 bits (63), Expect = 1.8
Identities = 29/144 (20%), Positives = 60/144 (41%), Gaps = 15/144 (10%)
Query: 12 LPQLEMLKNQLDQEVEFL----STSIAQLKVVQTKYVEAKDCLNVLNKSNEGKELLVPLT 67
+P+ +++ N QE F ST++A + + L++LNK + + + +
Sbjct: 2149 IPEGKIMNNTYYQECLFYLHNYSTNLAIISFYVRHSCLREALLHLLNKESPPEVFIEGIF 2208
Query: 68 SSMYVPGKLHDVEHVLIDVGTGYYVEKTAEDAKDFFKRKIDFLTKQ-----MEKIQPALQ 122
Y GKLH +E++L ++ T E + L K+ + ++Q ++
Sbjct: 2209 QPSYKSGKLHTLENLLES------IDPTLESWGKYLIAACQHLQKKNYYHILYELQQFMK 2262
Query: 123 EKHAMKQAVMEMMSQKIQQLTALG 146
++ + S K + T LG
Sbjct: 2263 DQVRAAMTCIRFFSHKAKSYTELG 2286
>gi|218083800 Rho GTPase-activating protein isoform 1 [Homo sapiens]
Length = 2087
Score = 28.5 bits (62), Expect = 2.4
Identities = 26/139 (18%), Positives = 56/139 (40%), Gaps = 20/139 (14%)
Query: 12 LPQLEMLKNQLDQEVEFLSTSIAQLKVVQTKYVEAKDCLNVLNKSNEGKELLVPLTSSMY 71
LP+ + LK+ + + L +++L + + L + N+G LLV SS+
Sbjct: 198 LPRSDTLKDSPESVTQMLMAYLSRLSAIAGNKINCGPALTWMEIDNKGNHLLVHEESSIN 257
Query: 72 VPGKLHDVEHVLIDVGTGYYVEKTAEDAKDFFKRKIDFLTKQMEKIQPAL----QEKHAM 127
P VG + +++ A D ++ + ++ L + KH
Sbjct: 258 TPA-----------VGAAHVIKRYTARAPDELTLEVGDIVSVIDMPPKVLSTWWRGKHGF 306
Query: 128 KQAV-----MEMMSQKIQQ 141
+ + +E+++QK+ Q
Sbjct: 307 QVGLFPGHCVELINQKVPQ 325
>gi|112789550 poly (ADP-ribose) polymerase family, member 4 [Homo
sapiens]
Length = 1724
Score = 28.5 bits (62), Expect = 2.4
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 10/66 (15%)
Query: 81 HVLIDVGTG----YYVEKTAEDAKDFFKRKIDFLTKQMEKIQPALQEKHAMKQAVMEMMS 136
H L+D G + ++KT+EDA ++F+ I+ L K Q L +H +A ++ S
Sbjct: 189 HFLLDDGMETRRQFAIKKTSEDASEYFENYIEELKK-----QGFLLREHFTPEAT-QLAS 242
Query: 137 QKIQQL 142
+++Q L
Sbjct: 243 EQLQAL 248
>gi|148762940 DVL-binding protein DAPLE [Homo sapiens]
Length = 2028
Score = 28.5 bits (62), Expect = 2.4
Identities = 30/138 (21%), Positives = 61/138 (44%), Gaps = 15/138 (10%)
Query: 1 MAQSINITELNLPQLEMLKNQLDQEVEFLSTSIAQLKVVQTKYVEAKDCLNVLNKSNEGK 60
+ +++ T L Q+E QL++E E L ++ LK + K + L+ + S E
Sbjct: 712 LVETMRFTSTKLAQMERENQQLEREKEELRKNVDLLKALGKKSERLE--LSYQSVSAENL 769
Query: 61 ELLVPLTSSMYVPGKLHDVEHVLIDVGTGYYVEKTAEDAKDFFKRKIDFLTKQMEKIQPA 120
L L SS + K +E L ++ E + +R ++ L +++ A
Sbjct: 770 RLQQSLESSSH---KTQTLESELGEL----------EAERQALRRDLEALRLANAQLEGA 816
Query: 121 LQEKHAMKQAVMEMMSQK 138
+++ A++Q V ++ K
Sbjct: 817 EKDRKALEQEVAQLEKDK 834
>gi|64085252 hypothetical protein LOC145508 [Homo sapiens]
Length = 1094
Score = 28.1 bits (61), Expect = 3.1
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 6 NITELNLPQLEMLKNQLDQEVEFLSTSIAQLKVVQTKYVEAKDCLNVLNK 55
N+ +++ QLE LK+Q D+ E L+ + + K ++ KY KD L K
Sbjct: 745 NMAKIHRGQLEKLKSQCDRLTEELTQNENENKKLKLKYQCLKDQLEEREK 794
>gi|4758906 serpin peptidase inhibitor, clade B, member 9 [Homo
sapiens]
Length = 376
Score = 27.7 bits (60), Expect = 4.1
Identities = 29/119 (24%), Positives = 49/119 (41%), Gaps = 13/119 (10%)
Query: 26 VEFLSTSIAQLKVVQTKYVEAKDCLNVLNKSNEGK--ELLVPLTSSMYVPGKLHDVEHVL 83
++F + +L ++ K ++K EGK ELL PG D E L
Sbjct: 109 LQFYHAELKELSFIRAAEESRKHINTWVSKKTEGKIEELL---------PGSSIDAETRL 159
Query: 84 IDVGTGYYVEKTAEDAKDFFKRKIDFLTKQMEK--IQPALQEKHAMKQAVMEMMSQKIQ 140
+ V Y+ K E + + R++ F Q E+ +Q QE V E+ +Q ++
Sbjct: 160 VLVNAIYFKGKWNEPFDETYTREMPFKINQEEQRPVQMMYQEATFKLAHVGEVRAQLLE 218
>gi|169218211 PREDICTED: similar to plectin 1, partial [Homo sapiens]
Length = 1369
Score = 27.7 bits (60), Expect = 4.1
Identities = 27/138 (19%), Positives = 59/138 (42%), Gaps = 9/138 (6%)
Query: 10 LNLPQLEMLKNQLDQEVEFLSTSIAQLKVVQTKYVEAKDCLNVLNKSNEGKELLV----- 64
L LP+ L E+E + Q++ + Y+E ++++ + +G E ++
Sbjct: 1184 LALPEPSPAAPTLRSELELTLGKLEQVRSLSAIYLEKLKTISLVIRGTQGAEEVLRAHEE 1243
Query: 65 PLTSSMYVPGKLHDVEHVLIDVGTGYYVEKTAEDAKDFFKRKIDFLTKQMEKIQPALQEK 124
L + VP L ++E + + AE + F D L + +++ LQ++
Sbjct: 1244 QLKEAQAVPATLPELEATKASLKK---LRAQAEAQQPTFDALRDEL-RGAQEVGERLQQR 1299
Query: 125 HAMKQAVMEMMSQKIQQL 142
H + +E +++ QL
Sbjct: 1300 HGERDVEVERWRERVAQL 1317
>gi|119964721 fer (fps/fes related) tyrosine kinase [Homo sapiens]
Length = 822
Score = 27.7 bits (60), Expect = 4.1
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 24 QEVEFLSTSIAQLKVVQTKYVEAKDCLNVLNKSNEGKE 61
Q +E L S+ QL+ + K+ K+ L + N+GKE
Sbjct: 358 QALEELKQSVQQLRCTEAKFSAQKELLEQKVQENDGKE 395
>gi|31377468 dedicator of cytokinesis 2 [Homo sapiens]
Length = 1830
Score = 27.7 bits (60), Expect = 4.1
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 48 DCLNVLNKSNEGKELLVPLTSSMYVPGKLHDVEHV 82
+ +N L KS +L+ + + Y+P LHDVE V
Sbjct: 775 ESINNLMKSQYKTTILLQVAALKYIPSVLHDVEMV 809
>gi|41322923 plectin 1 isoform 11 [Homo sapiens]
Length = 4547
Score = 27.7 bits (60), Expect = 4.1
Identities = 27/138 (19%), Positives = 59/138 (42%), Gaps = 9/138 (6%)
Query: 10 LNLPQLEMLKNQLDQEVEFLSTSIAQLKVVQTKYVEAKDCLNVLNKSNEGKELLV----- 64
L LP+ L E+E + Q++ + Y+E ++++ + +G E ++
Sbjct: 1051 LALPEPSPAAPTLRSELELTLGKLEQVRSLSAIYLEKLKTISLVIRGTQGAEEVLRAHEE 1110
Query: 65 PLTSSMYVPGKLHDVEHVLIDVGTGYYVEKTAEDAKDFFKRKIDFLTKQMEKIQPALQEK 124
L + VP L ++E + + AE + F D L + +++ LQ++
Sbjct: 1111 QLKEAQAVPATLPELEATKASLKK---LRAQAEAQQPTFDALRDEL-RGAQEVGERLQQR 1166
Query: 125 HAMKQAVMEMMSQKIQQL 142
H + +E +++ QL
Sbjct: 1167 HGERDVEVERWRERVAQL 1184
>gi|41322914 plectin 1 isoform 10 [Homo sapiens]
Length = 4551
Score = 27.7 bits (60), Expect = 4.1
Identities = 27/138 (19%), Positives = 59/138 (42%), Gaps = 9/138 (6%)
Query: 10 LNLPQLEMLKNQLDQEVEFLSTSIAQLKVVQTKYVEAKDCLNVLNKSNEGKELLV----- 64
L LP+ L E+E + Q++ + Y+E ++++ + +G E ++
Sbjct: 1055 LALPEPSPAAPTLRSELELTLGKLEQVRSLSAIYLEKLKTISLVIRGTQGAEEVLRAHEE 1114
Query: 65 PLTSSMYVPGKLHDVEHVLIDVGTGYYVEKTAEDAKDFFKRKIDFLTKQMEKIQPALQEK 124
L + VP L ++E + + AE + F D L + +++ LQ++
Sbjct: 1115 QLKEAQAVPATLPELEATKASLKK---LRAQAEAQQPTFDALRDEL-RGAQEVGERLQQR 1170
Query: 125 HAMKQAVMEMMSQKIQQL 142
H + +E +++ QL
Sbjct: 1171 HGERDVEVERWRERVAQL 1188
>gi|41322919 plectin 1 isoform 8 [Homo sapiens]
Length = 4547
Score = 27.7 bits (60), Expect = 4.1
Identities = 27/138 (19%), Positives = 59/138 (42%), Gaps = 9/138 (6%)
Query: 10 LNLPQLEMLKNQLDQEVEFLSTSIAQLKVVQTKYVEAKDCLNVLNKSNEGKELLV----- 64
L LP+ L E+E + Q++ + Y+E ++++ + +G E ++
Sbjct: 1051 LALPEPSPAAPTLRSELELTLGKLEQVRSLSAIYLEKLKTISLVIRGTQGAEEVLRAHEE 1110
Query: 65 PLTSSMYVPGKLHDVEHVLIDVGTGYYVEKTAEDAKDFFKRKIDFLTKQMEKIQPALQEK 124
L + VP L ++E + + AE + F D L + +++ LQ++
Sbjct: 1111 QLKEAQAVPATLPELEATKASLKK---LRAQAEAQQPTFDALRDEL-RGAQEVGERLQQR 1166
Query: 125 HAMKQAVMEMMSQKIQQL 142
H + +E +++ QL
Sbjct: 1167 HGERDVEVERWRERVAQL 1184
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.127 0.335
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,497,071
Number of Sequences: 37866
Number of extensions: 168293
Number of successful extensions: 686
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 665
Number of HSP's gapped (non-prelim): 55
length of query: 154
length of database: 18,247,518
effective HSP length: 93
effective length of query: 61
effective length of database: 14,725,980
effective search space: 898284780
effective search space used: 898284780
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.