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Search of human proteins with 221139840
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|221139840 transmembrane protein 25 isoform 5 [Homo sapiens]
(306 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|221139840 transmembrane protein 25 isoform 5 [Homo sapiens] 615 e-176
gi|221139830 transmembrane protein 25 isoform 2 [Homo sapiens] 595 e-170
gi|221219039 transmembrane protein 25 isoform 2 [Homo sapiens] 595 e-170
gi|221139838 transmembrane protein 25 isoform 4 [Homo sapiens] 590 e-169
gi|31377650 transmembrane protein 25 isoform 1 [Homo sapiens] 573 e-164
gi|221139834 transmembrane protein 25 isoform 3 [Homo sapiens] 337 8e-93
gi|118572606 hemicentin 1 [Homo sapiens] 47 2e-05
gi|13489095 sialoadhesin precursor [Homo sapiens] 41 0.002
gi|4758822 nephrin precursor [Homo sapiens] 40 0.003
gi|145275174 kin of IRRE-like 2 isoform c [Homo sapiens] 40 0.003
gi|145275172 kin of IRRE-like 2 isoform b [Homo sapiens] 40 0.003
gi|145275170 kin of IRRE-like 2 isoform a [Homo sapiens] 40 0.003
gi|166295173 kin of IRRE like [Homo sapiens] 39 0.008
gi|169214048 PREDICTED: hypothetical protein [Homo sapiens] 37 0.017
gi|89057602 PREDICTED: hypothetical protein [Homo sapiens] 37 0.017
gi|37551995 PREDICTED: hypothetical protein [Homo sapiens] 37 0.017
gi|68161541 carcinoembryonic antigen-related cell adhesion molec... 37 0.022
gi|19923195 carcinoembryonic antigen-related cell adhesion molec... 37 0.022
gi|169178458 PREDICTED: hemicentin 2 [Homo sapiens] 37 0.029
gi|239749684 PREDICTED: hemicentin 2 [Homo sapiens] 37 0.029
gi|169177000 PREDICTED: hemicentin 2 [Homo sapiens] 37 0.029
gi|98986445 carcinoembryonic antigen-related cell adhesion molec... 36 0.049
gi|59889562 neurotrophic tyrosine kinase, receptor, type 3 isofo... 35 0.083
gi|59889560 neurotrophic tyrosine kinase, receptor, type 3 isofo... 35 0.083
gi|55956794 neurotrophic tyrosine kinase, receptor, type 3 isofo... 35 0.083
gi|169168671 PREDICTED: similar to MHC class II antigen [Homo sa... 33 0.24
gi|54607118 leucine-rich repeats and immunoglobulin-like domains... 33 0.24
gi|157785645 SPEG complex locus [Homo sapiens] 33 0.32
gi|10835203 advanced glycosylation end product-specific receptor... 33 0.41
gi|116008194 myosin light chain kinase isoform 3A [Homo sapiens] 33 0.41
>gi|221139840 transmembrane protein 25 isoform 5 [Homo sapiens]
Length = 306
Score = 615 bits (1587), Expect = e-176
Identities = 306/306 (100%), Positives = 306/306 (100%)
Query: 1 MALPPGPAALRHTLLLLPALLSSGWGELEPQIDGQTWAERALRENERHAFTCRVAGGPGT 60
MALPPGPAALRHTLLLLPALLSSGWGELEPQIDGQTWAERALRENERHAFTCRVAGGPGT
Sbjct: 1 MALPPGPAALRHTLLLLPALLSSGWGELEPQIDGQTWAERALRENERHAFTCRVAGGPGT 60
Query: 61 PRLAWYLDGQLQEASTSRLLSVGGEAFSGGTSTFTVTAHRAQHELNCSLQDPRSGRSANA 120
PRLAWYLDGQLQEASTSRLLSVGGEAFSGGTSTFTVTAHRAQHELNCSLQDPRSGRSANA
Sbjct: 61 PRLAWYLDGQLQEASTSRLLSVGGEAFSGGTSTFTVTAHRAQHELNCSLQDPRSGRSANA 120
Query: 121 SVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPPANVTWIDQDGPVTVNTSDFL 180
SVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPPANVTWIDQDGPVTVNTSDFL
Sbjct: 121 SVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPPANVTWIDQDGPVTVNTSDFL 180
Query: 181 VLDAQNYPWLTNHTVQLQLRSLAHNLSVVATNDVGVTSASLPAPGPSRHPSLISSDSNNL 240
VLDAQNYPWLTNHTVQLQLRSLAHNLSVVATNDVGVTSASLPAPGPSRHPSLISSDSNNL
Sbjct: 181 VLDAQNYPWLTNHTVQLQLRSLAHNLSVVATNDVGVTSASLPAPGPSRHPSLISSDSNNL 240
Query: 241 KLNNVRLPRENMSLPSNLQLNDLTPDSRVKPADRQMAQNNSRPELLDPEPGGLLTSQGRR 300
KLNNVRLPRENMSLPSNLQLNDLTPDSRVKPADRQMAQNNSRPELLDPEPGGLLTSQGRR
Sbjct: 241 KLNNVRLPRENMSLPSNLQLNDLTPDSRVKPADRQMAQNNSRPELLDPEPGGLLTSQGRR 300
Query: 301 NQDKDA 306
NQDKDA
Sbjct: 301 NQDKDA 306
>gi|221139830 transmembrane protein 25 isoform 2 [Homo sapiens]
Length = 322
Score = 595 bits (1533), Expect = e-170
Identities = 298/299 (99%), Positives = 298/299 (99%), Gaps = 1/299 (0%)
Query: 1 MALPPGPAALRHTLLLLPALLSSGWGELEPQIDGQTWAERALRENERHAFTCRVAGGPGT 60
MALPPGPAALRHTLLLLPALLSSGWGELEPQIDGQTWAERALRENERHAFTCRVAGGPGT
Sbjct: 1 MALPPGPAALRHTLLLLPALLSSGWGELEPQIDGQTWAERALRENERHAFTCRVAGGPGT 60
Query: 61 PRLAWYLDGQLQEASTSRLLSVGGEAFSGGTSTFTVTAHRAQHELNCSLQDPRSGRSANA 120
PRLAWYLDGQLQEASTSRLLSVGGEAFSGGTSTFTVTAHRAQHELNCSLQDPRSGRSANA
Sbjct: 61 PRLAWYLDGQLQEASTSRLLSVGGEAFSGGTSTFTVTAHRAQHELNCSLQDPRSGRSANA 120
Query: 121 SVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPPANVTWIDQDGPVTVNTSDFL 180
SVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPPANVTWIDQDGPVTVNTSDFL
Sbjct: 121 SVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPPANVTWIDQDGPVTVNTSDFL 180
Query: 181 VLDAQNYPWLTNHTVQLQLRSLAHNLSVVATNDVGVTSASLPAPGPSRHPSLISSDSNNL 240
VLDAQNYPWLTNHTVQLQLRSLAHNLSVVATNDVGVTSASLPAPGPSRHPSLISSDSNNL
Sbjct: 181 VLDAQNYPWLTNHTVQLQLRSLAHNLSVVATNDVGVTSASLPAPGPSRHPSLISSDSNNL 240
Query: 241 KLNNVRLPRENMSLPSNLQLNDLTPDSR-VKPADRQMAQNNSRPELLDPEPGGLLTSQG 298
KLNNVRLPRENMSLPSNLQLNDLTPDSR VKPADRQMAQNNSRPELLDPEPGGLLTSQG
Sbjct: 241 KLNNVRLPRENMSLPSNLQLNDLTPDSRAVKPADRQMAQNNSRPELLDPEPGGLLTSQG 299
>gi|221219039 transmembrane protein 25 isoform 2 [Homo sapiens]
Length = 322
Score = 595 bits (1533), Expect = e-170
Identities = 298/299 (99%), Positives = 298/299 (99%), Gaps = 1/299 (0%)
Query: 1 MALPPGPAALRHTLLLLPALLSSGWGELEPQIDGQTWAERALRENERHAFTCRVAGGPGT 60
MALPPGPAALRHTLLLLPALLSSGWGELEPQIDGQTWAERALRENERHAFTCRVAGGPGT
Sbjct: 1 MALPPGPAALRHTLLLLPALLSSGWGELEPQIDGQTWAERALRENERHAFTCRVAGGPGT 60
Query: 61 PRLAWYLDGQLQEASTSRLLSVGGEAFSGGTSTFTVTAHRAQHELNCSLQDPRSGRSANA 120
PRLAWYLDGQLQEASTSRLLSVGGEAFSGGTSTFTVTAHRAQHELNCSLQDPRSGRSANA
Sbjct: 61 PRLAWYLDGQLQEASTSRLLSVGGEAFSGGTSTFTVTAHRAQHELNCSLQDPRSGRSANA 120
Query: 121 SVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPPANVTWIDQDGPVTVNTSDFL 180
SVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPPANVTWIDQDGPVTVNTSDFL
Sbjct: 121 SVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPPANVTWIDQDGPVTVNTSDFL 180
Query: 181 VLDAQNYPWLTNHTVQLQLRSLAHNLSVVATNDVGVTSASLPAPGPSRHPSLISSDSNNL 240
VLDAQNYPWLTNHTVQLQLRSLAHNLSVVATNDVGVTSASLPAPGPSRHPSLISSDSNNL
Sbjct: 181 VLDAQNYPWLTNHTVQLQLRSLAHNLSVVATNDVGVTSASLPAPGPSRHPSLISSDSNNL 240
Query: 241 KLNNVRLPRENMSLPSNLQLNDLTPDSR-VKPADRQMAQNNSRPELLDPEPGGLLTSQG 298
KLNNVRLPRENMSLPSNLQLNDLTPDSR VKPADRQMAQNNSRPELLDPEPGGLLTSQG
Sbjct: 241 KLNNVRLPRENMSLPSNLQLNDLTPDSRAVKPADRQMAQNNSRPELLDPEPGGLLTSQG 299
>gi|221139838 transmembrane protein 25 isoform 4 [Homo sapiens]
Length = 351
Score = 590 bits (1520), Expect = e-169
Identities = 306/351 (87%), Positives = 306/351 (87%), Gaps = 45/351 (12%)
Query: 1 MALPPGPAALRHTLLLLPALLSSGWGELEPQIDGQTWAERALRENERHAFTCRVAGGPGT 60
MALPPGPAALRHTLLLLPALLSSGWGELEPQIDGQTWAERALRENERHAFTCRVAGGPGT
Sbjct: 1 MALPPGPAALRHTLLLLPALLSSGWGELEPQIDGQTWAERALRENERHAFTCRVAGGPGT 60
Query: 61 PRLAWYLDGQLQEASTSRLLSVGGEAFSGGTSTFTVTAHRAQHELNCSLQDPRSGRSANA 120
PRLAWYLDGQLQEASTSRLLSVGGEAFSGGTSTFTVTAHRAQHELNCSLQDPRSGRSANA
Sbjct: 61 PRLAWYLDGQLQEASTSRLLSVGGEAFSGGTSTFTVTAHRAQHELNCSLQDPRSGRSANA 120
Query: 121 SVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPPANVTWIDQDGPVTVNTSDFL 180
SVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPPANVTWIDQDGPVTVNTSDFL
Sbjct: 121 SVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPPANVTWIDQDGPVTVNTSDFL 180
Query: 181 VLDAQNYPWLTNHTVQLQLRSLAHNLSVVATNDVGVTSASLPAP---------------- 224
VLDAQNYPWLTNHTVQLQLRSLAHNLSVVATNDVGVTSASLPAP
Sbjct: 181 VLDAQNYPWLTNHTVQLQLRSLAHNLSVVATNDVGVTSASLPAPGLLATRVEVPLLGIVV 240
Query: 225 ----------------------------GPSRHPSLISSDSNNLKLNNVRLPRENMSLPS 256
GPSRHPSLISSDSNNLKLNNVRLPRENMSLPS
Sbjct: 241 AAGLALGTLVGFSTLVACLVCRKEKKTKGPSRHPSLISSDSNNLKLNNVRLPRENMSLPS 300
Query: 257 NLQLNDLTPDSR-VKPADRQMAQNNSRPELLDPEPGGLLTSQGRRNQDKDA 306
NLQLNDLTPDSR VKPADRQMAQNNSRPELLDPEPGGLLTSQGRRNQDKDA
Sbjct: 301 NLQLNDLTPDSRAVKPADRQMAQNNSRPELLDPEPGGLLTSQGRRNQDKDA 351
>gi|31377650 transmembrane protein 25 isoform 1 [Homo sapiens]
Length = 366
Score = 573 bits (1478), Expect = e-164
Identities = 298/343 (86%), Positives = 298/343 (86%), Gaps = 45/343 (13%)
Query: 1 MALPPGPAALRHTLLLLPALLSSGWGELEPQIDGQTWAERALRENERHAFTCRVAGGPGT 60
MALPPGPAALRHTLLLLPALLSSGWGELEPQIDGQTWAERALRENERHAFTCRVAGGPGT
Sbjct: 1 MALPPGPAALRHTLLLLPALLSSGWGELEPQIDGQTWAERALRENERHAFTCRVAGGPGT 60
Query: 61 PRLAWYLDGQLQEASTSRLLSVGGEAFSGGTSTFTVTAHRAQHELNCSLQDPRSGRSANA 120
PRLAWYLDGQLQEASTSRLLSVGGEAFSGGTSTFTVTAHRAQHELNCSLQDPRSGRSANA
Sbjct: 61 PRLAWYLDGQLQEASTSRLLSVGGEAFSGGTSTFTVTAHRAQHELNCSLQDPRSGRSANA 120
Query: 121 SVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPPANVTWIDQDGPVTVNTSDFL 180
SVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPPANVTWIDQDGPVTVNTSDFL
Sbjct: 121 SVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPPANVTWIDQDGPVTVNTSDFL 180
Query: 181 VLDAQNYPWLTNHTVQLQLRSLAHNLSVVATNDVGVTSASLPAP---------------- 224
VLDAQNYPWLTNHTVQLQLRSLAHNLSVVATNDVGVTSASLPAP
Sbjct: 181 VLDAQNYPWLTNHTVQLQLRSLAHNLSVVATNDVGVTSASLPAPGLLATRVEVPLLGIVV 240
Query: 225 ----------------------------GPSRHPSLISSDSNNLKLNNVRLPRENMSLPS 256
GPSRHPSLISSDSNNLKLNNVRLPRENMSLPS
Sbjct: 241 AAGLALGTLVGFSTLVACLVCRKEKKTKGPSRHPSLISSDSNNLKLNNVRLPRENMSLPS 300
Query: 257 NLQLNDLTPDSR-VKPADRQMAQNNSRPELLDPEPGGLLTSQG 298
NLQLNDLTPDSR VKPADRQMAQNNSRPELLDPEPGGLLTSQG
Sbjct: 301 NLQLNDLTPDSRAVKPADRQMAQNNSRPELLDPEPGGLLTSQG 343
>gi|221139834 transmembrane protein 25 isoform 3 [Homo sapiens]
Length = 218
Score = 337 bits (864), Expect = 8e-93
Identities = 170/171 (99%), Positives = 170/171 (99%), Gaps = 1/171 (0%)
Query: 129 KPEIAQVGAKYQEAQGPGLLVVLFALVRANPPANVTWIDQDGPVTVNTSDFLVLDAQNYP 188
KPEIAQVGAKYQEAQGPGLLVVLFALVRANPPANVTWIDQDGPVTVNTSDFLVLDAQNYP
Sbjct: 25 KPEIAQVGAKYQEAQGPGLLVVLFALVRANPPANVTWIDQDGPVTVNTSDFLVLDAQNYP 84
Query: 189 WLTNHTVQLQLRSLAHNLSVVATNDVGVTSASLPAPGPSRHPSLISSDSNNLKLNNVRLP 248
WLTNHTVQLQLRSLAHNLSVVATNDVGVTSASLPAPGPSRHPSLISSDSNNLKLNNVRLP
Sbjct: 85 WLTNHTVQLQLRSLAHNLSVVATNDVGVTSASLPAPGPSRHPSLISSDSNNLKLNNVRLP 144
Query: 249 RENMSLPSNLQLNDLTPDSR-VKPADRQMAQNNSRPELLDPEPGGLLTSQG 298
RENMSLPSNLQLNDLTPDSR VKPADRQMAQNNSRPELLDPEPGGLLTSQG
Sbjct: 145 RENMSLPSNLQLNDLTPDSRAVKPADRQMAQNNSRPELLDPEPGGLLTSQG 195
Score = 48.1 bits (113), Expect = 9e-06
Identities = 23/23 (100%), Positives = 23/23 (100%)
Query: 1 MALPPGPAALRHTLLLLPALLSS 23
MALPPGPAALRHTLLLLPALLSS
Sbjct: 1 MALPPGPAALRHTLLLLPALLSS 23
>gi|118572606 hemicentin 1 [Homo sapiens]
Length = 5635
Score = 47.0 bits (110), Expect = 2e-05
Identities = 52/193 (26%), Positives = 75/193 (38%), Gaps = 24/193 (12%)
Query: 30 PQIDGQTWAERA-LRENERHAFTCRVAGGPGTPRLAWYLDGQ-LQEASTSRLLSVGGEAF 87
P I G+ E ++E + TC V G P P + W+ DGQ LQE ++S
Sbjct: 2478 PHIVGENTLEDVKVKEKQSVTLTCEVTGNP-VPEITWHKDGQPLQEDEAHHIIS------ 2530
Query: 88 SGGTSTFTVTAHRAQH--ELNCSLQDPRSGRSANASVILNVQFKPEIAQVGAKYQEAQGP 145
G +T + H C P +S + S LNV P IA VG+
Sbjct: 2531 --GGRFLQITNVQVPHTGRYTCLASSPAGHKSRSFS--LNVFVSPTIAGVGSDGNPEDVT 2586
Query: 146 GLLVVLFALV---RANPPANVTWIDQDGPVTVNTSDFLVLDAQNYPWLTNHTVQLQLRSL 202
+L +LV + PPA +TW P+ N + ++ + L
Sbjct: 2587 VILNSPTSLVCEAYSYPPATITWFKDGTPLESNRNIRILPGGRTLQILNAQ------EDN 2640
Query: 203 AHNLSVVATNDVG 215
A S VATN+ G
Sbjct: 2641 AGRYSCVATNEAG 2653
Score = 35.0 bits (79), Expect = 0.083
Identities = 59/254 (23%), Positives = 97/254 (38%), Gaps = 43/254 (16%)
Query: 45 NERHAFTCRVAGGPGTPRLAWYLDGQ-LQEASTSRLLSVGGEAFSGGTSTFTVTAHRAQH 103
N+ C +G P PR +W DGQ L E + LS G R
Sbjct: 2887 NKSALIECLSSGSPA-PRNSWQKDGQPLLEDDHHKFLSNG----------------RILQ 2929
Query: 104 ELNCSLQD--------PRSGRSANASVILNVQFKPEIAQVGAKYQEAQGP-GLLVVLFAL 154
LN + D + SA LNV P + +G K + + L
Sbjct: 2930 ILNTQITDIGRYVCVAENTAGSAKKYFNLNVHVPPSV--IGPKSENLTVVVNNFISLTCE 2987
Query: 155 VRANPPANVTWIDQDGPVTVNTSDFLVLDAQNYPWLTNHTVQLQLRSLAHNLSVVATNDV 214
V PP +++W+ + P+ +NT+ +V + T ++ ++ S + +A N
Sbjct: 2988 VSGFPPPDLSWLKNEQPIKLNTNTLIVPGGR-----TLQIIRAKV-SDGGEYTCIAINQA 3041
Query: 215 GVTSA--SLPAPGPSRHPSLISSDSNNLKLNNVRLPRENMSLPSNLQLNDLTPDSRVKPA 272
G + SL P PS+ DS +L + NV RE S+ + N + P
Sbjct: 3042 GESKKKFSLTVYVP---PSIKDHDSESLSVVNV---REGTSVSLECESNAVPPPVITWYK 3095
Query: 273 DRQMAQNNSRPELL 286
+ +M ++ E+L
Sbjct: 3096 NGRMITESTHVEIL 3109
Score = 30.4 bits (67), Expect = 2.0
Identities = 30/131 (22%), Positives = 49/131 (37%), Gaps = 29/131 (22%)
Query: 52 CRVAGGPGTPRLAWYLDGQLQEASTSRLLSVGG------EAFSGGTSTFTV----TAHRA 101
C V G P P + W DGQL + + + G +A T + TA
Sbjct: 1756 CHVTGSP-PPTIMWLKDGQLIDERDGFKILLNGRKLVIAQAQVSNTGLYRCMAANTAGDH 1814
Query: 102 QHELNCSLQDPRSGRSANASVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPPA 161
+ E ++ P + +S+ S + V++KP V L + P
Sbjct: 1815 KKEFEVTVHVPPTIKSSGLSERVVVKYKP------------------VALQCIANGIPNP 1856
Query: 162 NVTWIDQDGPV 172
++TW+ D PV
Sbjct: 1857 SITWLKDDQPV 1867
Score = 28.9 bits (63), Expect = 6.0
Identities = 33/141 (23%), Positives = 51/141 (36%), Gaps = 10/141 (7%)
Query: 52 CRVAGGPGTPRLAWYLDGQLQEASTSRLLSVGGEAFSGGTSTFTVTAHRAQHELNCSLQD 111
C+ AG P P + WY D +L STS G+ ++ + +N
Sbjct: 1942 CKAAGNP-VPVITWYKDNRLLSGSTSMTFLNRGQIIDIESAQISDAGIYKCVAIN----- 1995
Query: 112 PRSGRSANASVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPPANVTWIDQDGP 171
S + L V P I+ G+ A V L R P ++TW+ P
Sbjct: 1996 --SAGATELFYSLQVHVAPSIS--GSNNMVAVVVNNPVRLECEARGIPAPSLTWLKDGSP 2051
Query: 172 VTVNTSDFLVLDAQNYPWLTN 192
V+ ++ VL LT+
Sbjct: 2052 VSSFSNGLQVLSGGRILALTS 2072
>gi|13489095 sialoadhesin precursor [Homo sapiens]
Length = 1709
Score = 40.8 bits (94), Expect = 0.002
Identities = 39/130 (30%), Positives = 56/130 (43%), Gaps = 16/130 (12%)
Query: 42 LRENERHAFTCRV-AGGPGTPRLAWYLDGQLQEASTSRLLSVGGEAFSGGTSTFTVTAHR 100
L+E + +C+V G P WY DGQ + STS L + T+T
Sbjct: 906 LQEGQAVVLSCQVHTGVPEGTSYRWYRDGQPLQESTSATLRF---------AAITLTQAG 956
Query: 101 AQHELNCSLQDPRSGRSANASVI-LNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANP 159
A H C Q P S ++ A+ I L+V + P V GPG L +L V ++P
Sbjct: 957 AYH---CQAQAPGSATTSLAAPISLHVSYAPR--HVTLTTLMDTGPGRLGLLLCRVDSDP 1011
Query: 160 PANVTWIDQD 169
PA + + D
Sbjct: 1012 PAQLRLLHGD 1021
>gi|4758822 nephrin precursor [Homo sapiens]
Length = 1241
Score = 39.7 bits (91), Expect = 0.003
Identities = 37/133 (27%), Positives = 56/133 (42%), Gaps = 7/133 (5%)
Query: 42 LRENERHAFTCRVAGGPGTPRLAWYLDGQLQEAST----SRLLSVGGEAFSGGTSTFTVT 97
LR R C GG P L WY D + S SR + +G SG T + +
Sbjct: 455 LRAGTRVRLVCLAIGGNPEPSLMWYKDSRTVTESRLPQESRRVHLGSVEKSGSTFSRELV 514
Query: 98 AHRAQHELNCSLQDPRSGRSANASVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRA 157
+ N + ++G+ +AS L VQF P + A + L + V +
Sbjct: 515 LVTGPSD-NQAKFTCKAGQ-LSASTQLAVQFPPTNVTILANASALRPGDALNLTCVSVSS 572
Query: 158 NPPANVTWIDQDG 170
NPP N++W D++G
Sbjct: 573 NPPVNLSW-DKEG 584
>gi|145275174 kin of IRRE-like 2 isoform c [Homo sapiens]
Length = 708
Score = 39.7 bits (91), Expect = 0.003
Identities = 32/126 (25%), Positives = 48/126 (38%), Gaps = 6/126 (4%)
Query: 51 TCRVAGGPG-TPRLAWYLDGQLQEAST--SRLLSVGGEAFSGGTSTFTVTAHRAQHELNC 107
TCR G TP L W+ DG L + +T LL G T T T +H C
Sbjct: 145 TCRSRGDARPTPELLWFRDGVLLDGATFHQTLLKEGTPGSVESTLTLTPFSHDDGATFVC 204
Query: 108 SLQDPRSGRSANASVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPP-ANVTWI 166
+ + ++ L++Q+ PE+ + + +G V+ A PP W
Sbjct: 205 RARSQALPTGRDTAITLSLQYPPEVTLSASPHTVQEGE--KVIFLCQATAQPPVTGYRWA 262
Query: 167 DQDGPV 172
PV
Sbjct: 263 KGGSPV 268
>gi|145275172 kin of IRRE-like 2 isoform b [Homo sapiens]
Length = 583
Score = 39.7 bits (91), Expect = 0.003
Identities = 32/126 (25%), Positives = 48/126 (38%), Gaps = 6/126 (4%)
Query: 51 TCRVAGGPG-TPRLAWYLDGQLQEAST--SRLLSVGGEAFSGGTSTFTVTAHRAQHELNC 107
TCR G TP L W+ DG L + +T LL G T T T +H C
Sbjct: 95 TCRSRGDARPTPELLWFRDGVLLDGATFHQTLLKEGTPGSVESTLTLTPFSHDDGATFVC 154
Query: 108 SLQDPRSGRSANASVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPP-ANVTWI 166
+ + ++ L++Q+ PE+ + + +G V+ A PP W
Sbjct: 155 RARSQALPTGRDTAITLSLQYPPEVTLSASPHTVQEGE--KVIFLCQATAQPPVTGYRWA 212
Query: 167 DQDGPV 172
PV
Sbjct: 213 KGGSPV 218
>gi|145275170 kin of IRRE-like 2 isoform a [Homo sapiens]
Length = 633
Score = 39.7 bits (91), Expect = 0.003
Identities = 32/126 (25%), Positives = 48/126 (38%), Gaps = 6/126 (4%)
Query: 51 TCRVAGGPG-TPRLAWYLDGQLQEAST--SRLLSVGGEAFSGGTSTFTVTAHRAQHELNC 107
TCR G TP L W+ DG L + +T LL G T T T +H C
Sbjct: 145 TCRSRGDARPTPELLWFRDGVLLDGATFHQTLLKEGTPGSVESTLTLTPFSHDDGATFVC 204
Query: 108 SLQDPRSGRSANASVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPP-ANVTWI 166
+ + ++ L++Q+ PE+ + + +G V+ A PP W
Sbjct: 205 RARSQALPTGRDTAITLSLQYPPEVTLSASPHTVQEGE--KVIFLCQATAQPPVTGYRWA 262
Query: 167 DQDGPV 172
PV
Sbjct: 263 KGGSPV 268
>gi|166295173 kin of IRRE like [Homo sapiens]
Length = 757
Score = 38.5 bits (88), Expect = 0.008
Identities = 39/144 (27%), Positives = 61/144 (42%), Gaps = 18/144 (12%)
Query: 40 RALRENERHAFTCRVAGGPGTPRLAWYLDGQL-QEASTSRLLSVGGEAFSGGTSTFTVTA 98
+ ++E ER FTC+ P W G L ++A SR + +F FT
Sbjct: 232 QTVQEGERVVFTCQATANPEILGYRWAKGGFLIEDAHESRYETNVDYSF------FT--- 282
Query: 99 HRAQHELNCSLQDPRSGRSANASVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRAN 158
++C + + S N S ++NV F P I V K G V L + N
Sbjct: 283 ----EPVSCEVHNKVG--STNVSTLVNVHFAPRIV-VDPK-PTTTDIGSDVTLTCVWVGN 334
Query: 159 PPANVTWIDQDGPVTVNTSDFLVL 182
PP +TW +D + ++ S+ L+L
Sbjct: 335 PPLTLTWTKKDSNMVLSNSNQLLL 358
>gi|169214048 PREDICTED: hypothetical protein [Homo sapiens]
Length = 881
Score = 37.4 bits (85), Expect = 0.017
Identities = 34/119 (28%), Positives = 47/119 (39%), Gaps = 16/119 (13%)
Query: 57 GPGTPRLAWYLDGQLQEASTSRLLSVGGEA---FSGGTSTFTVTAHRAQH-ELNCSLQDP 112
GPG L+W DG+ EA+ S G E S G V R+ H C ++ P
Sbjct: 328 GPGRGELSWSRDGRALEAAESE----GAETPRMRSEGDQLLIVRPVRSDHARYTCRVRSP 383
Query: 113 RSGRSANASVILNVQFKPEIAQVGAKYQEAQGP------GLLVVLFALVRANPPANVTW 165
R A A V +V + P+ + P G V L + PPA++TW
Sbjct: 384 FGHREAAADV--SVFYGPDPPTITVSSDRDAAPARFVTAGSNVTLRCAAASRPPADITW 440
>gi|89057602 PREDICTED: hypothetical protein [Homo sapiens]
Length = 881
Score = 37.4 bits (85), Expect = 0.017
Identities = 34/119 (28%), Positives = 47/119 (39%), Gaps = 16/119 (13%)
Query: 57 GPGTPRLAWYLDGQLQEASTSRLLSVGGEA---FSGGTSTFTVTAHRAQH-ELNCSLQDP 112
GPG L+W DG+ EA+ S G E S G V R+ H C ++ P
Sbjct: 328 GPGRGELSWSRDGRALEAAESE----GAETPRMRSEGDQLLIVRPVRSDHARYTCRVRSP 383
Query: 113 RSGRSANASVILNVQFKPEIAQVGAKYQEAQGP------GLLVVLFALVRANPPANVTW 165
R A A V +V + P+ + P G V L + PPA++TW
Sbjct: 384 FGHREAAADV--SVFYGPDPPTITVSSDRDAAPARFVTAGSNVTLRCAAASRPPADITW 440
>gi|37551995 PREDICTED: hypothetical protein [Homo sapiens]
Length = 867
Score = 37.4 bits (85), Expect = 0.017
Identities = 34/119 (28%), Positives = 47/119 (39%), Gaps = 16/119 (13%)
Query: 57 GPGTPRLAWYLDGQLQEASTSRLLSVGGEA---FSGGTSTFTVTAHRAQH-ELNCSLQDP 112
GPG L+W DG+ EA+ S G E S G V R+ H C ++ P
Sbjct: 328 GPGRGELSWSRDGRALEAAESE----GAETPRMRSEGDQLLIVRPVRSDHARYTCRVRSP 383
Query: 113 RSGRSANASVILNVQFKPEIAQVGAKYQEAQGP------GLLVVLFALVRANPPANVTW 165
R A A V +V + P+ + P G V L + PPA++TW
Sbjct: 384 FGHREAAADV--SVFYGPDPPTITVSSDRDAAPARFVTAGSNVTLRCAAASRPPADITW 440
>gi|68161541 carcinoembryonic antigen-related cell adhesion molecule
1 isoform 2 precursor [Homo sapiens]
Length = 464
Score = 37.0 bits (84), Expect = 0.022
Identities = 53/250 (21%), Positives = 94/250 (37%), Gaps = 29/250 (11%)
Query: 42 LRENERHAFTCRVAGGPGTPRLAWYLDGQLQEASTSRLLSVGGEAFSGGTSTFTVTAHRA 101
+ + + AFTC T W+++ Q S LS G T T
Sbjct: 157 VEDKDAVAFTCEPETQDTT--YLWWINNQSLPVSPRLQLSNGNR-----TLTLLSVTRND 209
Query: 102 QHELNCSLQDPRSGRSANASVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPPA 161
C +Q+P S ++ V LNV + P+ + PG + L +NPPA
Sbjct: 210 TGPYECEIQNPVSANRSDP-VTLNVTYGPDTPTISPS-DTYYRPGANLSLSCYAASNPPA 267
Query: 162 NVTWI----DQDGPVTVNTSDFLVLDAQNYPWLTNHTVQLQLRSLAHNLSVVATNDVGVT 217
+W+ Q + + V ++ +Y N++V N + V T V
Sbjct: 268 QYSWLINGTFQQSTQELFIPNITVNNSGSYTCHANNSV------TGCNRTTVKTIIVTEL 321
Query: 218 SASLPAPGPSRHPSLISSDSNNLKLN--------NVRLPRENMSLPSN--LQLNDLTPDS 267
S + P + ++ D +++ L ++R +N SLPS+ ++L+
Sbjct: 322 SPVVAKPQIKASKTTVTGDKDSVNLTCSTNDTGISIRWFFKNQSLPSSERMKLSQGNTTL 381
Query: 268 RVKPADRQMA 277
+ P R+ A
Sbjct: 382 SINPVKREDA 391
>gi|19923195 carcinoembryonic antigen-related cell adhesion molecule
1 isoform 1 precursor [Homo sapiens]
Length = 526
Score = 37.0 bits (84), Expect = 0.022
Identities = 53/250 (21%), Positives = 94/250 (37%), Gaps = 29/250 (11%)
Query: 42 LRENERHAFTCRVAGGPGTPRLAWYLDGQLQEASTSRLLSVGGEAFSGGTSTFTVTAHRA 101
+ + + AFTC T W+++ Q S LS G T T
Sbjct: 157 VEDKDAVAFTCEPETQDTT--YLWWINNQSLPVSPRLQLSNGNR-----TLTLLSVTRND 209
Query: 102 QHELNCSLQDPRSGRSANASVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPPA 161
C +Q+P S ++ V LNV + P+ + PG + L +NPPA
Sbjct: 210 TGPYECEIQNPVSANRSDP-VTLNVTYGPDTPTISPS-DTYYRPGANLSLSCYAASNPPA 267
Query: 162 NVTWI----DQDGPVTVNTSDFLVLDAQNYPWLTNHTVQLQLRSLAHNLSVVATNDVGVT 217
+W+ Q + + V ++ +Y N++V N + V T V
Sbjct: 268 QYSWLINGTFQQSTQELFIPNITVNNSGSYTCHANNSV------TGCNRTTVKTIIVTEL 321
Query: 218 SASLPAPGPSRHPSLISSDSNNLKLN--------NVRLPRENMSLPSN--LQLNDLTPDS 267
S + P + ++ D +++ L ++R +N SLPS+ ++L+
Sbjct: 322 SPVVAKPQIKASKTTVTGDKDSVNLTCSTNDTGISIRWFFKNQSLPSSERMKLSQGNTTL 381
Query: 268 RVKPADRQMA 277
+ P R+ A
Sbjct: 382 SINPVKREDA 391
>gi|169178458 PREDICTED: hemicentin 2 [Homo sapiens]
Length = 3874
Score = 36.6 bits (83), Expect = 0.029
Identities = 38/152 (25%), Positives = 55/152 (36%), Gaps = 21/152 (13%)
Query: 39 ERALRENERHAFTCRVAGGPGTPRLAWYLDGQLQEASTSRLLSVG------GEAFSGGTS 92
E A+ E+ C G P TP + W+ DG L ST + + G G A S
Sbjct: 320 EVAVMEDHLVQLLCEARGVP-TPNITWFKDGALLPTSTKVVYTRGGRQLQLGRAQSSDAG 378
Query: 93 TFTVTAHRAQHELNCSLQDPRSGRSANASVILNVQFKPEIAQVGAK-YQEAQGPGLLVVL 151
+T A A +A + L+V P I G + Y G V L
Sbjct: 379 VYTCKASNAV-------------GAAEKATRLDVYVPPTIEGAGGRPYVVKAVAGRPVAL 425
Query: 152 FALVRANPPANVTWIDQDGPVTVNTSDFLVLD 183
+ R +P ++W + PV + L D
Sbjct: 426 ECVARGHPSPTLSWHHEGLPVAESNESRLETD 457
Score = 32.7 bits (73), Expect = 0.41
Identities = 52/226 (23%), Positives = 79/226 (34%), Gaps = 26/226 (11%)
Query: 39 ERALRENERHAFTCRVAGGPGTPRLAWYLDGQLQEASTS---RLLSVGGEAFSGGTSTFT 95
E + E + C G P P +AW DG R GG G
Sbjct: 2035 EHHVLEGQEVRLDCEADGQP-PPDVAWLKDGSPLGQDMGPHLRFYLDGGSLVLKGLRASD 2093
Query: 96 VTAHRAQHELNCSLQDPRSGRSANASVILNVQFKPEIAQ-VGAKYQEAQGPGLLVVLFAL 154
A+ C +P +G A + NV P I Q PG LV +
Sbjct: 2094 AGAY------TCVAHNP-AGEDARLHTV-NVLVPPTIKQGADGSGTLVSRPGELVTMVCP 2145
Query: 155 VRANPPANVTWIDQDGPVTVNTSDFLVLDAQNYPWLTNHTVQLQLRSLAHN--LSVVATN 212
VR +PP +V+W+ P+ ++ L + HT+++ LA + VA +
Sbjct: 2146 VRGSPPIHVSWLKDGLPLPLSQRTLL--------HGSGHTLRISKVQLADAGIFTCVAAS 2197
Query: 213 DVGVTSASLPAP---GPSRHPSLISSDSNNLKLNNVRLPRENMSLP 255
GV + P P +D ++ + V LP E +P
Sbjct: 2198 PAGVADRNFTLQVQVPPVLEPVEFQNDVVVVRGSLVELPCEARGVP 2243
Score = 30.0 bits (66), Expect = 2.7
Identities = 29/124 (23%), Positives = 45/124 (36%), Gaps = 11/124 (8%)
Query: 61 PRLAWYLDGQ-------LQEASTSRLLSVGGEAFSGGTSTFTVTAHRA---QHELNCSLQ 110
P + WY DGQ LQ RLL + S V + A + N +Q
Sbjct: 1478 PTIRWYKDGQPVTPSSRLQVLGEGRLLQIQPTQVSDSGRYLCVATNVAGEDDQDFNVLIQ 1537
Query: 111 -DPRSGRSANASVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPPANVTWIDQD 169
P + + S + + E A+ G L+ A PP ++TW +D
Sbjct: 1538 VPPMFQKVGDFSAAFEILSREEEARGGVTEYREIVENNPAYLYCDTNAIPPPDLTWYRED 1597
Query: 170 GPVT 173
P++
Sbjct: 1598 QPLS 1601
Score = 28.5 bits (62), Expect = 7.8
Identities = 28/122 (22%), Positives = 43/122 (35%), Gaps = 8/122 (6%)
Query: 51 TCRVAGGPGTPRLAWYLDGQLQEASTSRLLSVGGEAFSGGTSTFTVTAHRAQHELNCSLQ 110
TC V+G P P + W D E+S +V G GG + C +
Sbjct: 1954 TCDVSGVPA-PTVTWLKDRMPVESS-----AVHGVVSRGGRLQLSRLQPAQAGTYTCVAE 2007
Query: 111 DPRSGRSANASVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPPANVTWIDQDG 170
+ ++ A ++ V P I G + G V L PP +V W+
Sbjct: 2008 NTQA--EARKDFVVAVLVAPRIRSSGVAREHHVLEGQEVRLDCEADGQPPPDVAWLKDGS 2065
Query: 171 PV 172
P+
Sbjct: 2066 PL 2067
Score = 28.5 bits (62), Expect = 7.8
Identities = 28/120 (23%), Positives = 45/120 (37%), Gaps = 24/120 (20%)
Query: 52 CRVAGGPGTPRLAWYLDGQ------LQEASTSRLLSVGGEAFSGGTSTFTVTAHRAQHEL 105
C G P P ++W DG+ L++ + +L +VG +G + T++ A E
Sbjct: 2237 CEARGVP-LPLVSWMKDGEPLLSQSLEQGPSLQLEAVG----AGDSGTYSCVAVSEAGEA 2291
Query: 106 NCSLQDPRSGRSANASVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPPANVTW 165
Q L V P I G + + PG + L + P N+TW
Sbjct: 2292 RRHFQ-------------LTVMEPPHIEDSGQPTELSLTPGAPMELLCDAQGTPQPNITW 2338
>gi|239749684 PREDICTED: hemicentin 2 [Homo sapiens]
Length = 5065
Score = 36.6 bits (83), Expect = 0.029
Identities = 38/152 (25%), Positives = 55/152 (36%), Gaps = 21/152 (13%)
Query: 39 ERALRENERHAFTCRVAGGPGTPRLAWYLDGQLQEASTSRLLSVG------GEAFSGGTS 92
E A+ E+ C G P TP + W+ DG L ST + + G G A S
Sbjct: 1511 EVAVMEDHLVQLLCEARGVP-TPNITWFKDGALLPTSTKVVYTRGGRQLQLGRAQSSDAG 1569
Query: 93 TFTVTAHRAQHELNCSLQDPRSGRSANASVILNVQFKPEIAQVGAK-YQEAQGPGLLVVL 151
+T A A +A + L+V P I G + Y G V L
Sbjct: 1570 VYTCKASNAV-------------GAAEKATRLDVYVPPTIEGAGGRPYVVKAVAGRPVAL 1616
Query: 152 FALVRANPPANVTWIDQDGPVTVNTSDFLVLD 183
+ R +P ++W + PV + L D
Sbjct: 1617 ECVARGHPSPTLSWHHEGLPVAESNESRLETD 1648
Score = 32.7 bits (73), Expect = 0.41
Identities = 52/226 (23%), Positives = 79/226 (34%), Gaps = 26/226 (11%)
Query: 39 ERALRENERHAFTCRVAGGPGTPRLAWYLDGQLQEASTS---RLLSVGGEAFSGGTSTFT 95
E + E + C G P P +AW DG R GG G
Sbjct: 3226 EHHVLEGQEVRLDCEADGQP-PPDVAWLKDGSPLGQDMGPHLRFYLDGGSLVLKGLRASD 3284
Query: 96 VTAHRAQHELNCSLQDPRSGRSANASVILNVQFKPEIAQ-VGAKYQEAQGPGLLVVLFAL 154
A+ C +P +G A + NV P I Q PG LV +
Sbjct: 3285 AGAY------TCVAHNP-AGEDARLHTV-NVLVPPTIKQGADGSGTLVSRPGELVTMVCP 3336
Query: 155 VRANPPANVTWIDQDGPVTVNTSDFLVLDAQNYPWLTNHTVQLQLRSLAHN--LSVVATN 212
VR +PP +V+W+ P+ ++ L + HT+++ LA + VA +
Sbjct: 3337 VRGSPPIHVSWLKDGLPLPLSQRTLL--------HGSGHTLRISKVQLADAGIFTCVAAS 3388
Query: 213 DVGVTSASLPAP---GPSRHPSLISSDSNNLKLNNVRLPRENMSLP 255
GV + P P +D ++ + V LP E +P
Sbjct: 3389 PAGVADRNFTLQVQVPPVLEPVEFQNDVVVVRGSLVELPCEARGVP 3434
Score = 30.0 bits (66), Expect = 2.7
Identities = 29/124 (23%), Positives = 45/124 (36%), Gaps = 11/124 (8%)
Query: 61 PRLAWYLDGQ-------LQEASTSRLLSVGGEAFSGGTSTFTVTAHRA---QHELNCSLQ 110
P + WY DGQ LQ RLL + S V + A + N +Q
Sbjct: 2669 PTIRWYKDGQPVTPSSRLQVLGEGRLLQIQPTQVSDSGRYLCVATNVAGEDDQDFNVLIQ 2728
Query: 111 -DPRSGRSANASVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPPANVTWIDQD 169
P + + S + + E A+ G L+ A PP ++TW +D
Sbjct: 2729 VPPMFQKVGDFSAAFEILSREEEARGGVTEYREIVENNPAYLYCDTNAIPPPDLTWYRED 2788
Query: 170 GPVT 173
P++
Sbjct: 2789 QPLS 2792
Score = 28.5 bits (62), Expect = 7.8
Identities = 28/122 (22%), Positives = 43/122 (35%), Gaps = 8/122 (6%)
Query: 51 TCRVAGGPGTPRLAWYLDGQLQEASTSRLLSVGGEAFSGGTSTFTVTAHRAQHELNCSLQ 110
TC V+G P P + W D E+S +V G GG + C +
Sbjct: 3145 TCDVSGVPA-PTVTWLKDRMPVESS-----AVHGVVSRGGRLQLSRLQPAQAGTYTCVAE 3198
Query: 111 DPRSGRSANASVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPPANVTWIDQDG 170
+ ++ A ++ V P I G + G V L PP +V W+
Sbjct: 3199 NTQA--EARKDFVVAVLVAPRIRSSGVAREHHVLEGQEVRLDCEADGQPPPDVAWLKDGS 3256
Query: 171 PV 172
P+
Sbjct: 3257 PL 3258
Score = 28.5 bits (62), Expect = 7.8
Identities = 28/120 (23%), Positives = 45/120 (37%), Gaps = 24/120 (20%)
Query: 52 CRVAGGPGTPRLAWYLDGQ------LQEASTSRLLSVGGEAFSGGTSTFTVTAHRAQHEL 105
C G P P ++W DG+ L++ + +L +VG +G + T++ A E
Sbjct: 3428 CEARGVP-LPLVSWMKDGEPLLSQSLEQGPSLQLEAVG----AGDSGTYSCVAVSEAGEA 3482
Query: 106 NCSLQDPRSGRSANASVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPPANVTW 165
Q L V P I G + + PG + L + P N+TW
Sbjct: 3483 RRHFQ-------------LTVMEPPHIEDSGQPTELSLTPGAPMELLCDAQGTPQPNITW 3529
>gi|169177000 PREDICTED: hemicentin 2 [Homo sapiens]
Length = 3783
Score = 36.6 bits (83), Expect = 0.029
Identities = 38/152 (25%), Positives = 55/152 (36%), Gaps = 21/152 (13%)
Query: 39 ERALRENERHAFTCRVAGGPGTPRLAWYLDGQLQEASTSRLLSVG------GEAFSGGTS 92
E A+ E+ C G P TP + W+ DG L ST + + G G A S
Sbjct: 229 EVAVMEDHLVQLLCEARGVP-TPNITWFKDGALLPTSTKVVYTRGGRQLQLGRAQSSDAG 287
Query: 93 TFTVTAHRAQHELNCSLQDPRSGRSANASVILNVQFKPEIAQVGAK-YQEAQGPGLLVVL 151
+T A A +A + L+V P I G + Y G V L
Sbjct: 288 VYTCKASNAV-------------GAAEKATRLDVYVPPTIEGAGGRPYVVKAVAGRPVAL 334
Query: 152 FALVRANPPANVTWIDQDGPVTVNTSDFLVLD 183
+ R +P ++W + PV + L D
Sbjct: 335 ECVARGHPSPTLSWHHEGLPVAESNESRLETD 366
Score = 32.7 bits (73), Expect = 0.41
Identities = 52/226 (23%), Positives = 79/226 (34%), Gaps = 26/226 (11%)
Query: 39 ERALRENERHAFTCRVAGGPGTPRLAWYLDGQLQEASTS---RLLSVGGEAFSGGTSTFT 95
E + E + C G P P +AW DG R GG G
Sbjct: 1944 EHHVLEGQEVRLDCEADGQP-PPDVAWLKDGSPLGQDMGPHLRFYLDGGSLVLKGLRASD 2002
Query: 96 VTAHRAQHELNCSLQDPRSGRSANASVILNVQFKPEIAQ-VGAKYQEAQGPGLLVVLFAL 154
A+ C +P +G A + NV P I Q PG LV +
Sbjct: 2003 AGAY------TCVAHNP-AGEDARLHTV-NVLVPPTIKQGADGSGTLVSRPGELVTMVCP 2054
Query: 155 VRANPPANVTWIDQDGPVTVNTSDFLVLDAQNYPWLTNHTVQLQLRSLAHN--LSVVATN 212
VR +PP +V+W+ P+ ++ L + HT+++ LA + VA +
Sbjct: 2055 VRGSPPIHVSWLKDGLPLPLSQRTLL--------HGSGHTLRISKVQLADAGIFTCVAAS 2106
Query: 213 DVGVTSASLPAP---GPSRHPSLISSDSNNLKLNNVRLPRENMSLP 255
GV + P P +D ++ + V LP E +P
Sbjct: 2107 PAGVADRNFTLQVQVPPVLEPVEFQNDVVVVRGSLVELPCEARGVP 2152
Score = 30.0 bits (66), Expect = 2.7
Identities = 29/124 (23%), Positives = 45/124 (36%), Gaps = 11/124 (8%)
Query: 61 PRLAWYLDGQ-------LQEASTSRLLSVGGEAFSGGTSTFTVTAHRA---QHELNCSLQ 110
P + WY DGQ LQ RLL + S V + A + N +Q
Sbjct: 1387 PTIRWYKDGQPVTPSSRLQVLGEGRLLQIQPTQVSDSGRYLCVATNVAGEDDQDFNVLIQ 1446
Query: 111 -DPRSGRSANASVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPPANVTWIDQD 169
P + + S + + E A+ G L+ A PP ++TW +D
Sbjct: 1447 VPPMFQKVGDFSAAFEILSREEEARGGVTEYREIVENNPAYLYCDTNAIPPPDLTWYRED 1506
Query: 170 GPVT 173
P++
Sbjct: 1507 QPLS 1510
Score = 28.5 bits (62), Expect = 7.8
Identities = 28/122 (22%), Positives = 43/122 (35%), Gaps = 8/122 (6%)
Query: 51 TCRVAGGPGTPRLAWYLDGQLQEASTSRLLSVGGEAFSGGTSTFTVTAHRAQHELNCSLQ 110
TC V+G P P + W D E+S +V G GG + C +
Sbjct: 1863 TCDVSGVPA-PTVTWLKDRMPVESS-----AVHGVVSRGGRLQLSRLQPAQAGTYTCVAE 1916
Query: 111 DPRSGRSANASVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPPANVTWIDQDG 170
+ ++ A ++ V P I G + G V L PP +V W+
Sbjct: 1917 NTQA--EARKDFVVAVLVAPRIRSSGVAREHHVLEGQEVRLDCEADGQPPPDVAWLKDGS 1974
Query: 171 PV 172
P+
Sbjct: 1975 PL 1976
Score = 28.5 bits (62), Expect = 7.8
Identities = 28/120 (23%), Positives = 45/120 (37%), Gaps = 24/120 (20%)
Query: 52 CRVAGGPGTPRLAWYLDGQ------LQEASTSRLLSVGGEAFSGGTSTFTVTAHRAQHEL 105
C G P P ++W DG+ L++ + +L +VG +G + T++ A E
Sbjct: 2146 CEARGVP-LPLVSWMKDGEPLLSQSLEQGPSLQLEAVG----AGDSGTYSCVAVSEAGEA 2200
Query: 106 NCSLQDPRSGRSANASVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPPANVTW 165
Q L V P I G + + PG + L + P N+TW
Sbjct: 2201 RRHFQ-------------LTVMEPPHIEDSGQPTELSLTPGAPMELLCDAQGTPQPNITW 2247
>gi|98986445 carcinoembryonic antigen-related cell adhesion molecule
5 preproprotein [Homo sapiens]
Length = 702
Score = 35.8 bits (81), Expect = 0.049
Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 9/126 (7%)
Query: 107 CSLQDPRSGRSANASVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPPANVTWI 166
C +Q+ S ++ VILNV + P+ + Y + PG+ + L +NPPA +W+
Sbjct: 393 CGIQNKLSVDHSDP-VILNVLYGPDDPTISPSYTYYR-PGVNLSLSCHAASNPPAQYSWL 450
Query: 167 DQDGPVTVNTSDFLVLD-AQNYPWLTNHTVQLQLRSLAHNLSVVATNDVGVTSASLPAPG 225
DG + +T + + + + L +T Q + H+ + V T V SA LP P
Sbjct: 451 -IDGNIQQHTQELFISNITEKNSGL--YTCQANNSASGHSRTTVKTITV---SAELPKPS 504
Query: 226 PSRHPS 231
S + S
Sbjct: 505 ISSNNS 510
>gi|59889562 neurotrophic tyrosine kinase, receptor, type 3 isoform
a precursor [Homo sapiens]
Length = 839
Score = 35.0 bits (79), Expect = 0.083
Identities = 32/131 (24%), Positives = 53/131 (40%), Gaps = 9/131 (6%)
Query: 42 LRENERHAFTCRVAGGPGTPRLAWYLDGQLQEASTSRLLSVGGEAFSGGTSTFTVTAHRA 101
+RE + TC +G P P + W + G LQ +T + + + VT+
Sbjct: 221 VREGDNAVITCNGSGSP-LPDVDWIVTG-LQSINTHQTNLNWTNVHAINLTLVNVTSEDN 278
Query: 102 QHELNCSLQDPRSGRSANASVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPPA 161
L C ++ +NASV L V + P + + E L + +VR NPP
Sbjct: 279 GFTLTCIAENVVG--MSNASVALTVYYPPRVVSL-----EEPELRLEHCIEFVVRGNPPP 331
Query: 162 NVTWIDQDGPV 172
+ W+ P+
Sbjct: 332 TLHWLHNGQPL 342
>gi|59889560 neurotrophic tyrosine kinase, receptor, type 3 isoform
b precursor [Homo sapiens]
Length = 825
Score = 35.0 bits (79), Expect = 0.083
Identities = 32/131 (24%), Positives = 53/131 (40%), Gaps = 9/131 (6%)
Query: 42 LRENERHAFTCRVAGGPGTPRLAWYLDGQLQEASTSRLLSVGGEAFSGGTSTFTVTAHRA 101
+RE + TC +G P P + W + G LQ +T + + + VT+
Sbjct: 221 VREGDNAVITCNGSGSP-LPDVDWIVTG-LQSINTHQTNLNWTNVHAINLTLVNVTSEDN 278
Query: 102 QHELNCSLQDPRSGRSANASVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPPA 161
L C ++ +NASV L V + P + + E L + +VR NPP
Sbjct: 279 GFTLTCIAENVVG--MSNASVALTVYYPPRVVSL-----EEPELRLEHCIEFVVRGNPPP 331
Query: 162 NVTWIDQDGPV 172
+ W+ P+
Sbjct: 332 TLHWLHNGQPL 342
>gi|55956794 neurotrophic tyrosine kinase, receptor, type 3 isoform
c precursor [Homo sapiens]
Length = 612
Score = 35.0 bits (79), Expect = 0.083
Identities = 32/131 (24%), Positives = 53/131 (40%), Gaps = 9/131 (6%)
Query: 42 LRENERHAFTCRVAGGPGTPRLAWYLDGQLQEASTSRLLSVGGEAFSGGTSTFTVTAHRA 101
+RE + TC +G P P + W + G LQ +T + + + VT+
Sbjct: 221 VREGDNAVITCNGSGSP-LPDVDWIVTG-LQSINTHQTNLNWTNVHAINLTLVNVTSEDN 278
Query: 102 QHELNCSLQDPRSGRSANASVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPPA 161
L C ++ +NASV L V + P + + E L + +VR NPP
Sbjct: 279 GFTLTCIAENVVG--MSNASVALTVYYPPRVVSL-----EEPELRLEHCIEFVVRGNPPP 331
Query: 162 NVTWIDQDGPV 172
+ W+ P+
Sbjct: 332 TLHWLHNGQPL 342
>gi|169168671 PREDICTED: similar to MHC class II antigen [Homo
sapiens]
Length = 241
Score = 33.5 bits (75), Expect = 0.24
Identities = 35/151 (23%), Positives = 65/151 (43%), Gaps = 12/151 (7%)
Query: 6 GPAALRHTLLLLPALL---SSGWGELEPQIDGQTWAERALRENERHAFTCRVAGG-PGTP 61
G AA R LLL AL+ + EL+P+ G + + + R+ C V+G PG+
Sbjct: 74 GLAAGRVLKLLLRALIRLHKKRFNELQPK--GTMYPAKTEPLHHRNPLVCSVSGFYPGSI 131
Query: 62 RLAWYLDGQLQEASTSRLLSVGGEAFSGGTSTFTVTAHRAQHELNCSLQDPRSGRSANAS 121
+ W+ +GQ ++A+ + + ++ T T R+ C ++ P + +
Sbjct: 132 EVRWFQNGQEEKAAVVSIGLIQNGDWTFQTLVMLETVPRSGEVYTCQVEHP------SVT 185
Query: 122 VILNVQFKPEIAQVGAKYQEAQGPGLLVVLF 152
L V++ +K G +L +LF
Sbjct: 186 SPLTVEWSARTESAQSKMLSGVGGFVLGLLF 216
>gi|54607118 leucine-rich repeats and immunoglobulin-like domains 1
[Homo sapiens]
Length = 1093
Score = 33.5 bits (75), Expect = 0.24
Identities = 36/137 (26%), Positives = 52/137 (37%), Gaps = 13/137 (9%)
Query: 52 CRVAGGPGTPRLAWYLDGQLQ-EASTSRLLSVGGEAFSGGTSTFTVTAHRAQHE--LNCS 108
C G P P++AW DG A+ R + V + F +T + +C+
Sbjct: 620 CAATGHPN-PQIAWQKDGGTDFPAARERRMHVMPD-----DDVFFITDVKIDDAGVYSCT 673
Query: 109 LQDPRSGRSANASVILNVQFKPEIAQVGAKYQEAQGPGLLVVLFALVRANPPANVTWIDQ 168
Q+ SANA+ L V P + V G V L NPP +TW
Sbjct: 674 AQNSAGSISANAT--LTVLETPSL--VVPLEDRVVSVGETVALQCKATGNPPPRITWFKG 729
Query: 169 DGPVTVNTSDFLVLDAQ 185
D P+++ L D Q
Sbjct: 730 DRPLSLTERHHLTPDNQ 746
>gi|157785645 SPEG complex locus [Homo sapiens]
Length = 3267
Score = 33.1 bits (74), Expect = 0.32
Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 13/103 (12%)
Query: 145 PGLLVVLFALVRANPPANVTWIDQDGPVTVNTSDFLVLDAQNYPWLTNHTVQLQLRSLAH 204
PG V+L ++ ANPP V+W +DG + + L+L A+ HT+ L+ A
Sbjct: 735 PGADVLLKCIITANPPPQVSW-HKDGS-ALRSEGRLLLRAEG----ERHTLLLREARAAD 788
Query: 205 --NLSVVATNDVG--VTSASLPA-PGPSRHP--SLISSDSNNL 240
+ ATN++G +ASL PG S P S I+SD L
Sbjct: 789 AGSYMATATNELGQATCAASLTVRPGGSTSPFSSPITSDEEYL 831
>gi|10835203 advanced glycosylation end product-specific receptor
isoform 1 precursor [Homo sapiens]
Length = 404
Score = 32.7 bits (73), Expect = 0.41
Identities = 23/90 (25%), Positives = 37/90 (41%), Gaps = 6/90 (6%)
Query: 142 AQGPGLLVVLFALVRANPPANVTWIDQDGPVTVNTSDFLVL------DAQNYPWLTNHTV 195
A PG V L V A P + W+ P+ + S L+L D Y + H+
Sbjct: 248 AVAPGGTVTLTCEVPAQPSPQIHWMKDGVPLPLPPSPVLILPEIGPQDQGTYSCVATHSS 307
Query: 196 QLQLRSLAHNLSVVATNDVGVTSASLPAPG 225
S A ++S++ + G T+ S+ G
Sbjct: 308 HGPQESRAVSISIIEPGEEGPTAGSVGGSG 337
>gi|116008194 myosin light chain kinase isoform 3A [Homo sapiens]
Length = 1863
Score = 32.7 bits (73), Expect = 0.41
Identities = 39/151 (25%), Positives = 62/151 (41%), Gaps = 17/151 (11%)
Query: 41 ALRENERHAFTCRVAGGPGTPRLAWYLDGQ-LQEASTSRLLSVG----GEAFSGGTSTFT 95
A+ E + C V G P PR+ W L+GQ +Q A ++ V +A T+T
Sbjct: 524 AVIEGQDFVLQCSVRGTP-VPRITWLLNGQPIQYARSTCEAGVAELHIQDALPEDHGTYT 582
Query: 96 VTAHRAQHELNCS----LQDPRSGRSANASVILNVQFKPEIAQV---GAKYQEAQGPGLL 148
A A +++CS + + +S R + +L V A + G + G
Sbjct: 583 CLAENALGQVSCSAWVTVHEKKSSR--KSEYLLPVAPSKPTAPIFLQGLSDLKVM-DGSQ 639
Query: 149 VVLFALVRANPPANVTWIDQDGPVTVNTSDF 179
V + V NPP V W+ +G + DF
Sbjct: 640 VTMTVQVSGNPPPEVIWL-HNGNEIQESEDF 669
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.130 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,530,707
Number of Sequences: 37866
Number of extensions: 619713
Number of successful extensions: 1757
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 66
Number of HSP's that attempted gapping in prelim test: 1627
Number of HSP's gapped (non-prelim): 185
length of query: 306
length of database: 18,247,518
effective HSP length: 102
effective length of query: 204
effective length of database: 14,385,186
effective search space: 2934577944
effective search space used: 2934577944
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.