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Search of human proteins with 221139804
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|221139804 RNA binding motif protein 24 isoform 3 [Homo
sapiens]
(178 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|221139804 RNA binding motif protein 24 isoform 3 [Homo sapiens] 356 5e-99
gi|23308561 RNA binding motif protein 24 isoform 2 [Homo sapiens] 356 5e-99
gi|221139802 RNA binding motif protein 24 isoform 1 [Homo sapiens] 356 5e-99
gi|34577107 RNA-binding region containing protein 1 isoform a [H... 190 5e-49
gi|34577105 RNA-binding region containing protein 1 isoform b [H... 79 3e-15
gi|210032509 hypothetical protein LOC100130302 [Homo sapiens] 51 6e-07
gi|24497554 homeobox A13 [Homo sapiens] 45 3e-05
gi|24497589 aristaless related homeobox [Homo sapiens] 45 3e-05
gi|19111150 angiomotin isoform 2 [Homo sapiens] 45 4e-05
gi|166064029 angiomotin isoform 1 [Homo sapiens] 45 4e-05
gi|149408126 nemo like kinase [Homo sapiens] 44 7e-05
gi|13540521 basic helix-loop-helix domain containing, class B, 3... 43 2e-04
gi|4758392 forkhead box D1 [Homo sapiens] 43 2e-04
gi|110347459 MYC-associated zinc finger protein isoform 2 [Homo ... 42 4e-04
gi|110347461 MYC-associated zinc finger protein isoform 1 [Homo ... 42 4e-04
gi|122937319 even-skipped homeobox 2 [Homo sapiens] 42 4e-04
gi|13491166 pumilio 1 isoform 2 [Homo sapiens] 41 5e-04
gi|66932909 pumilio 1 isoform 1 [Homo sapiens] 41 5e-04
gi|126352608 elastin isoform e precursor [Homo sapiens] 41 5e-04
gi|126352446 elastin isoform d precursor [Homo sapiens] 41 5e-04
gi|126352322 elastin isoform c precursor [Homo sapiens] 41 5e-04
gi|126352700 elastin isoform b precursor [Homo sapiens] 41 5e-04
gi|126352440 elastin isoform a precursor [Homo sapiens] 41 5e-04
gi|5902108 SRY-box 21 [Homo sapiens] 41 5e-04
gi|73476377 LBXCOR1 homolog [Homo sapiens] 41 6e-04
gi|6912372 forkhead box D3 [Homo sapiens] 40 8e-04
gi|148762982 hypothetical protein LOC387640 [Homo sapiens] 40 8e-04
gi|5454064 RNA binding motif protein 14 [Homo sapiens] 39 0.002
gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo sap... 39 0.002
gi|148746211 NK2 transcription factor related, locus 3 [Homo sap... 39 0.003
>gi|221139804 RNA binding motif protein 24 isoform 3 [Homo sapiens]
Length = 178
Score = 356 bits (914), Expect = 5e-99
Identities = 178/178 (100%), Positives = 178/178 (100%)
Query: 1 MADRAAAERACKDPNPIIDGRKANVNLAYLGAKPRIMQPGFAFGVQQLHPALIQRPFGIP 60
MADRAAAERACKDPNPIIDGRKANVNLAYLGAKPRIMQPGFAFGVQQLHPALIQRPFGIP
Sbjct: 1 MADRAAAERACKDPNPIIDGRKANVNLAYLGAKPRIMQPGFAFGVQQLHPALIQRPFGIP 60
Query: 61 AHYVYPQAFVQPGVVIPHVQPTAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQYPY 120
AHYVYPQAFVQPGVVIPHVQPTAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQYPY
Sbjct: 61 AHYVYPQAFVQPGVVIPHVQPTAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQYPY 120
Query: 121 AASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAAAAAAAFGQYQPQQLQTDRMQ 178
AASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAAAAAAAFGQYQPQQLQTDRMQ
Sbjct: 121 AASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAAAAAAAFGQYQPQQLQTDRMQ 178
>gi|23308561 RNA binding motif protein 24 isoform 2 [Homo sapiens]
Length = 191
Score = 356 bits (914), Expect = 5e-99
Identities = 178/178 (100%), Positives = 178/178 (100%)
Query: 1 MADRAAAERACKDPNPIIDGRKANVNLAYLGAKPRIMQPGFAFGVQQLHPALIQRPFGIP 60
MADRAAAERACKDPNPIIDGRKANVNLAYLGAKPRIMQPGFAFGVQQLHPALIQRPFGIP
Sbjct: 14 MADRAAAERACKDPNPIIDGRKANVNLAYLGAKPRIMQPGFAFGVQQLHPALIQRPFGIP 73
Query: 61 AHYVYPQAFVQPGVVIPHVQPTAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQYPY 120
AHYVYPQAFVQPGVVIPHVQPTAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQYPY
Sbjct: 74 AHYVYPQAFVQPGVVIPHVQPTAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQYPY 133
Query: 121 AASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAAAAAAAFGQYQPQQLQTDRMQ 178
AASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAAAAAAAFGQYQPQQLQTDRMQ
Sbjct: 134 AASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAAAAAAAFGQYQPQQLQTDRMQ 191
>gi|221139802 RNA binding motif protein 24 isoform 1 [Homo sapiens]
Length = 236
Score = 356 bits (914), Expect = 5e-99
Identities = 178/178 (100%), Positives = 178/178 (100%)
Query: 1 MADRAAAERACKDPNPIIDGRKANVNLAYLGAKPRIMQPGFAFGVQQLHPALIQRPFGIP 60
MADRAAAERACKDPNPIIDGRKANVNLAYLGAKPRIMQPGFAFGVQQLHPALIQRPFGIP
Sbjct: 59 MADRAAAERACKDPNPIIDGRKANVNLAYLGAKPRIMQPGFAFGVQQLHPALIQRPFGIP 118
Query: 61 AHYVYPQAFVQPGVVIPHVQPTAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQYPY 120
AHYVYPQAFVQPGVVIPHVQPTAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQYPY
Sbjct: 119 AHYVYPQAFVQPGVVIPHVQPTAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQYPY 178
Query: 121 AASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAAAAAAAFGQYQPQQLQTDRMQ 178
AASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAAAAAAAFGQYQPQQLQTDRMQ
Sbjct: 179 AASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAAAAAAAFGQYQPQQLQTDRMQ 236
>gi|34577107 RNA-binding region containing protein 1 isoform a [Homo
sapiens]
Length = 239
Score = 190 bits (483), Expect = 5e-49
Identities = 109/180 (60%), Positives = 118/180 (65%), Gaps = 24/180 (13%)
Query: 1 MADRAAAERACKDPNPIIDGRKANVNLAYLGAKPRIMQPGFAFGVQQLHPALIQRPFGIP 60
MADRAAAERACKDPNPIIDGRKANVNLAYLGAKPR +Q GFA GVQQLHP LIQR +G+
Sbjct: 82 MADRAAAERACKDPNPIIDGRKANVNLAYLGAKPRSLQTGFAIGVQQLHPTLIQRTYGLT 141
Query: 61 AHYVYPQAFVQPGVVIPHVQPTAAAASTTPYIDYTGA--AYAQYSAAAAAAAAAAAYDQY 118
HY+YP A VQP VVIP P + +S PYI+YT A AYAQY A YDQY
Sbjct: 142 PHYIYPPAIVQPSVVIP-AAPVPSLSS--PYIEYTPASPAYAQY--------PPATYDQY 190
Query: 119 PYAASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAAAAAAAFGQYQPQQLQTDRMQ 178
PYAASPA A Y AV Q ++AAAP A F QYQ QLQ DRMQ
Sbjct: 191 PYAASPATAASFVGYSYPAAVPQALSAAAP-----------AGTTFVQYQAPQLQPDRMQ 239
>gi|34577105 RNA-binding region containing protein 1 isoform b [Homo
sapiens]
Length = 121
Score = 78.6 bits (192), Expect = 3e-15
Identities = 37/40 (92%), Positives = 38/40 (95%)
Query: 1 MADRAAAERACKDPNPIIDGRKANVNLAYLGAKPRIMQPG 40
MADRAAAERACKDPNPIIDGRKANVNLAYLGAKPR +Q G
Sbjct: 82 MADRAAAERACKDPNPIIDGRKANVNLAYLGAKPRSLQTG 121
>gi|210032509 hypothetical protein LOC100130302 [Homo sapiens]
Length = 887
Score = 50.8 bits (120), Expect = 6e-07
Identities = 39/90 (43%), Positives = 46/90 (51%), Gaps = 7/90 (7%)
Query: 77 PHVQPTAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYG 136
P +P +AAA+ AA A +AAAAAAAAAA AA+PA A
Sbjct: 488 PLKRPFSAAAAIA-------AAAAAAAAAAAAAAAAAPAPALAAAAAPALAAAAAPALAA 540
Query: 137 YAVQQPITAAAPGTAAAAAAAAAAAAAFGQ 166
A P AAAP AAA AAAA+AA + Q
Sbjct: 541 AAAPAPAPAAAPAVAAAPAAAASAAPSHSQ 570
Score = 35.8 bits (81), Expect = 0.020
Identities = 22/51 (43%), Positives = 32/51 (62%), Gaps = 6/51 (11%)
Query: 119 PYAASPAAAGYVTAGGY------GYAVQQPITAAAPGTAAAAAAAAAAAAA 163
P P+++G +++G G +++P +AAA AAAAAAAAAAAAA
Sbjct: 463 PRTQLPSSSGKISSGNSFPPQQAGSPLKRPFSAAAAIAAAAAAAAAAAAAA 513
Score = 27.7 bits (60), Expect = 5.4
Identities = 18/43 (41%), Positives = 19/43 (44%)
Query: 121 AASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAAAAAAA 163
A SP + A A AAA AAA A A AAAAA
Sbjct: 485 AGSPLKRPFSAAAAIAAAAAAAAAAAAAAAAAAPAPALAAAAA 527
>gi|24497554 homeobox A13 [Homo sapiens]
Length = 388
Score = 45.4 bits (106), Expect = 3e-05
Identities = 32/61 (52%), Positives = 35/61 (57%)
Query: 103 SAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAAAAAA 162
+AAAAAAAAAAA A PA A Y A + +AA AAAAAAAAAAAA
Sbjct: 73 AAAAAAAAAAAANQCRNLMAHPAPLAPGAASAYSSAPGEAPPSAAAAAAAAAAAAAAAAA 132
Query: 163 A 163
A
Sbjct: 133 A 133
Score = 41.6 bits (96), Expect = 4e-04
Identities = 34/60 (56%), Positives = 36/60 (60%), Gaps = 15/60 (25%)
Query: 104 AAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAAAAAAA 163
AAAAAAAAAAA AAAG AGG G+ P AAA G + AAAAAAAAAA
Sbjct: 38 AAAAAAAAAAA----------AAAG---AGGGGFP--HPAAAAAGGNFSVAAAAAAAAAA 82
Score = 40.0 bits (92), Expect = 0.001
Identities = 38/92 (41%), Positives = 43/92 (46%), Gaps = 24/92 (26%)
Query: 96 GAAYAQYSAAAAAA-----------AAAAAYDQYPYAASPAAAGYVTAGGYGYAVQQPIT 144
GAA A +AAAAAA AAAAA + AA+ AAA A + P
Sbjct: 37 GAAAAAAAAAAAAAAGAGGGGFPHPAAAAAGGNFSVAAAAAAAAAAAANQCRNLMAHPAP 96
Query: 145 AA-------------APGTAAAAAAAAAAAAA 163
A AP +AAAAAAAAAAAAA
Sbjct: 97 LAPGAASAYSSAPGEAPPSAAAAAAAAAAAAA 128
Score = 39.3 bits (90), Expect = 0.002
Identities = 37/91 (40%), Positives = 48/91 (52%), Gaps = 15/91 (16%)
Query: 83 AAAASTTPYIDYTGAAYAQYSAAAAAAAAAAA---------YDQYPYAASP-AAAGYVTA 132
AAA + + AA A + + AAAAAAAA +P +P AA+ Y +A
Sbjct: 49 AAAGAGGGGFPHPAAAAAGGNFSVAAAAAAAAAAAANQCRNLMAHPAPLAPGAASAYSSA 108
Query: 133 GGYGYAVQQPITAAAPGTAAAAAAAAAAAAA 163
G + P +AAA AAAAAAAAAAAA+
Sbjct: 109 PG-----EAPPSAAAAAAAAAAAAAAAAAAS 134
Score = 37.7 bits (86), Expect = 0.005
Identities = 29/72 (40%), Positives = 37/72 (51%), Gaps = 6/72 (8%)
Query: 104 AAAAAAAAAAAYDQ------YPYAASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAA 157
AAAAAAAAAAA +Q +P +P AA ++ AAA AAAAAAA
Sbjct: 73 AAAAAAAAAAAANQCRNLMAHPAPLAPGAASAYSSAPGEAPPSAAAAAAAAAAAAAAAAA 132
Query: 158 AAAAAAFGQYQP 169
A+++ G P
Sbjct: 133 ASSSGGPGPAGP 144
Score = 37.4 bits (85), Expect = 0.007
Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 14/96 (14%)
Query: 75 VIPHVQPTAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTAGG 134
++ H P A A++ Y G A +AAAAAAAAAAA AAA ++GG
Sbjct: 90 LMAHPAPLAPGAASA-YSSAPGEAPPSAAAAAAAAAAAAA----------AAAAASSSGG 138
Query: 135 YGYAVQQPITAA---APGTAAAAAAAAAAAAAFGQY 167
G A AA +P +AAA +++ AA +G +
Sbjct: 139 PGPAGPAGAEAAKQCSPCSAAAQSSSGPAALPYGYF 174
Score = 36.2 bits (82), Expect = 0.015
Identities = 39/112 (34%), Positives = 46/112 (41%), Gaps = 25/112 (22%)
Query: 77 PHVQPTAAAASTTP-YIDYTGAAYAQYSAAAAAAAAAAAYDQYPYAASPAAA-------- 127
P A+A S+ P + AA A +AAAAAAAAAA+ P A PA A
Sbjct: 96 PLAPGAASAYSSAPGEAPPSAAAAAAAAAAAAAAAAAASSSGGPGPAGPAGAEAAKQCSP 155
Query: 128 ----------------GYVTAGGYGYAVQQPITAAAPGTAAAAAAAAAAAAA 163
GY +G Y A P A A A+AAAAAA A
Sbjct: 156 CSAAAQSSSGPAALPYGYFGSGYYPCARMGPHPNAIKSCAQPASAAAAAAFA 207
Score = 27.7 bits (60), Expect = 5.4
Identities = 34/113 (30%), Positives = 40/113 (35%), Gaps = 19/113 (16%)
Query: 77 PHVQPTAAAASTTPYIDYTGAAYAQYSA----------AAAAAAAAAAYDQYPYAASP-- 124
PH P AAAA + AA A +A A A AA+AY P A P
Sbjct: 59 PH--PAAAAAGGNFSVAAAAAAAAAAAANQCRNLMAHPAPLAPGAASAYSSAPGEAPPSA 116
Query: 125 -----AAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAAAAAAAFGQYQPQQL 172
AAA A + P A G AA + +AAA P L
Sbjct: 117 AAAAAAAAAAAAAAAAASSSGGPGPAGPAGAEAAKQCSPCSAAAQSSSGPAAL 169
Score = 27.3 bits (59), Expect = 7.1
Identities = 16/28 (57%), Positives = 17/28 (60%)
Query: 136 GYAVQQPITAAAPGTAAAAAAAAAAAAA 163
G V + G AAAAAAAAAAAAA
Sbjct: 24 GGLVADELNKNMEGAAAAAAAAAAAAAA 51
>gi|24497589 aristaless related homeobox [Homo sapiens]
Length = 562
Score = 45.4 bits (106), Expect = 3e-05
Identities = 37/74 (50%), Positives = 39/74 (52%), Gaps = 15/74 (20%)
Query: 96 GAAYAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAVQQPITAAAPG-----T 150
G Q +AAAAAAAAAAA AAA TAG G A P A PG
Sbjct: 93 GGRLLQGAAAAAAAAAAAA----------AAAATATAGPRGEAPPPPPPTARPGERPDGA 142
Query: 151 AAAAAAAAAAAAAF 164
AAAAAAAAAAAA+
Sbjct: 143 GAAAAAAAAAAAAW 156
Score = 29.6 bits (65), Expect = 1.4
Identities = 19/43 (44%), Positives = 21/43 (48%)
Query: 134 GYGYAVQQPITAAAPGTAAAAAAAAAAAAAFGQYQPQQLQTDR 176
G G +Q AAA AAAAAAA A A G+ P T R
Sbjct: 92 GGGRLLQGAAAAAAAAAAAAAAAATATAGPRGEAPPPPPPTAR 134
Score = 27.3 bits (59), Expect = 7.1
Identities = 16/29 (55%), Positives = 18/29 (62%)
Query: 135 YGYAVQQPITAAAPGTAAAAAAAAAAAAA 163
YG + + AA AAAAAAAAAAA A
Sbjct: 89 YGPGGGRLLQGAAAAAAAAAAAAAAAATA 117
Score = 26.9 bits (58), Expect = 9.2
Identities = 34/128 (26%), Positives = 48/128 (37%), Gaps = 40/128 (31%)
Query: 76 IPHVQPTAAAASTTPYID------YTGAAYAQYSAAAAAAAAA----------------- 112
+P P +A +PY+D + A + ++AAAAAAAAA
Sbjct: 398 LPFPGPLSATHPLSPYLDASPFPPHHPALDSAWTAAAAAAAAAFPSLPPPPGSASLPPSG 457
Query: 113 ----------AAYDQYPYAASPA-------AAGYVTAGGYGYAVQQPITAAAPGTAAAAA 155
AA ++P SPA A +A ++QP A A+ A
Sbjct: 458 APLGLSTFLGAAVFRHPAFISPAFGRLFSTMAPLTSASTAAALLRQPTPAVEGAVASGAL 517
Query: 156 AAAAAAAA 163
A A AAA
Sbjct: 518 ADPATAAA 525
>gi|19111150 angiomotin isoform 2 [Homo sapiens]
Length = 675
Score = 44.7 bits (104), Expect = 4e-05
Identities = 39/87 (44%), Positives = 43/87 (49%), Gaps = 7/87 (8%)
Query: 83 AAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAVQQP 142
AA +T I T A A + AAAAA AAAA A SPA A TA A
Sbjct: 485 AAITATAATITTTMVAAAPVAVAAAAAPAAAA------APSPATAA-ATAAAVSPAAAGQ 537
Query: 143 ITAAAPGTAAAAAAAAAAAAAFGQYQP 169
I AAA +AAA A +AAAAA Q P
Sbjct: 538 IPAAASVASAAAVAPSAAAAAAVQVAP 564
Score = 39.7 bits (91), Expect = 0.001
Identities = 39/96 (40%), Positives = 42/96 (43%), Gaps = 13/96 (13%)
Query: 81 PTAAAASTTPYIDYTGAAYAQYSAAAAAAAAA---AAYDQYPYAASPAAAGYVTAGGYGY 137
P A AA+ P AA A A AAA AAA AA Q P AAS A+A V
Sbjct: 503 PVAVAAAAAP-----AAAAAPSPATAAATAAAVSPAAAGQIPAAASVASAAAVAPSAAAA 557
Query: 138 AVQQPITAA-----APGTAAAAAAAAAAAAAFGQYQ 168
A Q AA AP A AAA A+A Q Q
Sbjct: 558 AAVQVAPAAPAPVPAPALVPVPAPAAAQASAPAQTQ 593
Score = 32.3 bits (72), Expect = 0.22
Identities = 33/87 (37%), Positives = 37/87 (42%), Gaps = 20/87 (22%)
Query: 79 VQPTAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYA 138
V AAA+T I T A AAA A AAA A+PAAA A
Sbjct: 474 VPAPVAAAATAAAITATAATITTTMVAAAPVAVAAA-------AAPAAA----------A 516
Query: 139 VQQPITAAAPGTAAAAAAA---AAAAA 162
P TAAA A + AAA AAA+
Sbjct: 517 APSPATAAATAAAVSPAAAGQIPAAAS 543
Score = 30.4 bits (67), Expect = 0.84
Identities = 28/80 (35%), Positives = 35/80 (43%), Gaps = 12/80 (15%)
Query: 84 AAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAVQQPI 143
AAA P A+ A +A A +AAAAAA P A +P A + V P
Sbjct: 533 AAAGQIP----AAASVASAAAVAPSAAAAAAVQVAPAAPAPVPAPAL--------VPVPA 580
Query: 144 TAAAPGTAAAAAAAAAAAAA 163
AAA +A A A +A A
Sbjct: 581 PAAAQASAPAQTQAPTSAPA 600
Score = 30.0 bits (66), Expect = 1.1
Identities = 29/73 (39%), Positives = 31/73 (42%), Gaps = 7/73 (9%)
Query: 97 AAYAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAA 156
AA A S A AAAA A AA A A +T A AAAP AAAA +
Sbjct: 467 AAVAPISVPAPVAAAATA------AAITATAATITTTMVAAAPVAVAAAAAPA-AAAAPS 519
Query: 157 AAAAAAAFGQYQP 169
A AAA P
Sbjct: 520 PATAAATAAAVSP 532
>gi|166064029 angiomotin isoform 1 [Homo sapiens]
Length = 1084
Score = 44.7 bits (104), Expect = 4e-05
Identities = 39/87 (44%), Positives = 43/87 (49%), Gaps = 7/87 (8%)
Query: 83 AAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAVQQP 142
AA +T I T A A + AAAAA AAAA A SPA A TA A
Sbjct: 894 AAITATAATITTTMVAAAPVAVAAAAAPAAAA------APSPATAA-ATAAAVSPAAAGQ 946
Query: 143 ITAAAPGTAAAAAAAAAAAAAFGQYQP 169
I AAA +AAA A +AAAAA Q P
Sbjct: 947 IPAAASVASAAAVAPSAAAAAAVQVAP 973
Score = 39.7 bits (91), Expect = 0.001
Identities = 39/96 (40%), Positives = 42/96 (43%), Gaps = 13/96 (13%)
Query: 81 PTAAAASTTPYIDYTGAAYAQYSAAAAAAAAA---AAYDQYPYAASPAAAGYVTAGGYGY 137
P A AA+ P AA A A AAA AAA AA Q P AAS A+A V
Sbjct: 912 PVAVAAAAAP-----AAAAAPSPATAAATAAAVSPAAAGQIPAAASVASAAAVAPSAAAA 966
Query: 138 AVQQPITAA-----APGTAAAAAAAAAAAAAFGQYQ 168
A Q AA AP A AAA A+A Q Q
Sbjct: 967 AAVQVAPAAPAPVPAPALVPVPAPAAAQASAPAQTQ 1002
Score = 32.3 bits (72), Expect = 0.22
Identities = 33/87 (37%), Positives = 37/87 (42%), Gaps = 20/87 (22%)
Query: 79 VQPTAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYA 138
V AAA+T I T A AAA A AAA A+PAAA A
Sbjct: 883 VPAPVAAAATAAAITATAATITTTMVAAAPVAVAAA-------AAPAAA----------A 925
Query: 139 VQQPITAAAPGTAAAAAAA---AAAAA 162
P TAAA A + AAA AAA+
Sbjct: 926 APSPATAAATAAAVSPAAAGQIPAAAS 952
Score = 30.4 bits (67), Expect = 0.84
Identities = 28/80 (35%), Positives = 35/80 (43%), Gaps = 12/80 (15%)
Query: 84 AAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAVQQPI 143
AAA P A+ A +A A +AAAAAA P A +P A + V P
Sbjct: 942 AAAGQIP----AAASVASAAAVAPSAAAAAAVQVAPAAPAPVPAPAL--------VPVPA 989
Query: 144 TAAAPGTAAAAAAAAAAAAA 163
AAA +A A A +A A
Sbjct: 990 PAAAQASAPAQTQAPTSAPA 1009
Score = 30.0 bits (66), Expect = 1.1
Identities = 29/73 (39%), Positives = 31/73 (42%), Gaps = 7/73 (9%)
Query: 97 AAYAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAA 156
AA A S A AAAA A AA A A +T A AAAP AAAA +
Sbjct: 876 AAVAPISVPAPVAAAATA------AAITATAATITTTMVAAAPVAVAAAAAPA-AAAAPS 928
Query: 157 AAAAAAAFGQYQP 169
A AAA P
Sbjct: 929 PATAAATAAAVSP 941
>gi|149408126 nemo like kinase [Homo sapiens]
Length = 527
Score = 43.9 bits (102), Expect = 7e-05
Identities = 36/102 (35%), Positives = 44/102 (43%), Gaps = 28/102 (27%)
Query: 62 HYVYPQAFVQPGVVIPHVQPTAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQYPYA 121
H+ +PQ + PG +AA+ P +T +A A +AAAAAAA Q PY
Sbjct: 45 HHHHPQHHLHPG----------SAAAVHPVQQHTSSAAAAAAAAAAAAAMLNPGQQQPYF 94
Query: 122 ASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAAAAAAA 163
SPA APG AAAA A AAAA
Sbjct: 95 PSPA------------------PGQAPGPAAAAPAQVQAAAA 118
Score = 28.9 bits (63), Expect = 2.4
Identities = 18/34 (52%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Query: 138 AVQQPITAAAPGTAAAAAAAAAAAAAF--GQYQP 169
A P+ AAAAAAAAAAAA GQ QP
Sbjct: 59 AAVHPVQQHTSSAAAAAAAAAAAAAMLNPGQQQP 92
Score = 28.1 bits (61), Expect = 4.1
Identities = 15/24 (62%), Positives = 17/24 (70%)
Query: 150 TAAAAAAAAAAAAAFGQYQPQQLQ 173
T++AAAAAAAAAAA P Q Q
Sbjct: 68 TSSAAAAAAAAAAAAAMLNPGQQQ 91
>gi|13540521 basic helix-loop-helix domain containing, class B, 3
[Homo sapiens]
Length = 482
Score = 42.7 bits (99), Expect = 2e-04
Identities = 49/160 (30%), Positives = 62/160 (38%), Gaps = 45/160 (28%)
Query: 5 AAAERACKDPNPIIDGRKANVNLAYLGAKPRIMQPGFAFGVQQLHPALIQRPFGIPAHYV 64
AAA A P+P + A L + ++ G G PA PF +P ++
Sbjct: 298 AAAAAALLGPDPAAAAALLRPDAALLSS---LVAFGGGGGAPFPQPAAAAAPFCLPFCFL 354
Query: 65 YPQAFVQPGVVIPHVQPTAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQYPYAASP 124
P+AAAA P++D +G Y AAAAA YP +P
Sbjct: 355 ---------------SPSAAAAYVQPFLDKSGLEKYLYPAAAAAPFPLL----YPGIPAP 395
Query: 125 AAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAAAAAAAF 164
AAA AAAAAAAAAAAAAF
Sbjct: 396 AAA-----------------------AAAAAAAAAAAAAF 412
Score = 30.0 bits (66), Expect = 1.1
Identities = 29/83 (34%), Positives = 35/83 (42%), Gaps = 8/83 (9%)
Query: 92 IDYTGAAYAQYSAAAAAAAAAAAYDQYPYAAS----PAAAGYVT----AGGYGYAVQQPI 143
+D G AAAAAAA P AA+ P AA + GG G QP
Sbjct: 282 LDSRGGGSGGGPGGGAAAAAAALLGPDPAAAAALLRPDAALLSSLVAFGGGGGAPFPQPA 341
Query: 144 TAAAPGTAAAAAAAAAAAAAFGQ 166
AAAP + +AAAA+ Q
Sbjct: 342 AAAAPFCLPFCFLSPSAAAAYVQ 364
>gi|4758392 forkhead box D1 [Homo sapiens]
Length = 465
Score = 42.7 bits (99), Expect = 2e-04
Identities = 40/93 (43%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Query: 77 PHVQPTAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYG 136
P + P AAAA + + GAA A AAAAA + P P A GY G G
Sbjct: 225 PLLPPNAAAAESL-LLRGAGAA----GGAGDPAAAAALFPPAP-PPPPHAYGYGPYG-CG 277
Query: 137 YAVQQPITAAAPGTAAAAAAAAAAAAAFGQYQP 169
Y +Q P A P AAAAAAAAAAAF + P
Sbjct: 278 YGLQLP-PYAPPSALFAAAAAAAAAAAFHPHSP 309
Score = 42.4 bits (98), Expect = 2e-04
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 81 PTAAAASTTPYI--DYTGAAYAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYA 138
P A+A + +P+ G + +AAAAAA AAAA P + AA + G G A
Sbjct: 352 PGASALARSPFSIESIIGGSLGPAAAAAAAAQAAAAAQASPSPSPVAAPPAPGSSGGGCA 411
Query: 139 VQQPITAAAPGTAAAAAAAAAAAAA 163
Q + AA T + AAAAAAA++
Sbjct: 412 AQAAVGPAAALTRSLVAAAAAAASS 436
Score = 35.4 bits (80), Expect = 0.026
Identities = 34/112 (30%), Positives = 46/112 (41%), Gaps = 13/112 (11%)
Query: 69 FVQPGVVIPHVQPTAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQYPYAAS---PA 125
+ P + AAAA+ P+ + AAA A A Y +P A+ P
Sbjct: 285 YAPPSALFAAAAAAAAAAAFHPHSPPPPPP--PHGAAAELARTAFGYRPHPLGAALPGPL 342
Query: 126 AAGYVTAGGYG--------YAVQQPITAAAPGTAAAAAAAAAAAAAFGQYQP 169
A AGG G ++++ I + AAAAAAA AAAAA P
Sbjct: 343 PASAAKAGGPGASALARSPFSIESIIGGSLGPAAAAAAAAQAAAAAQASPSP 394
>gi|110347459 MYC-associated zinc finger protein isoform 2 [Homo
sapiens]
Length = 493
Score = 41.6 bits (96), Expect = 4e-04
Identities = 40/102 (39%), Positives = 44/102 (43%), Gaps = 11/102 (10%)
Query: 72 PGVVIPHVQPTAAAASTTPY-IDYTGA-AYAQYSAAAAAAAAAAAYDQYPYAASPAAAGY 129
P P PT A + P +D A AQ SAAAAAAAAAAA +PAAA
Sbjct: 62 PFQAAPAPPPTPQAPAAEPLQVDLLPVLAAAQESAAAAAAAAAAAAAVAAAPPAPAAAST 121
Query: 130 VTAGGYGY---------AVQQPITAAAPGTAAAAAAAAAAAA 162
V V P AAP +AA AAAAA A
Sbjct: 122 VDTAALKQPPAPPPPPPPVSAPAAEAAPPASAATIAAAAATA 163
Score = 32.7 bits (73), Expect = 0.17
Identities = 18/28 (64%), Positives = 20/28 (71%)
Query: 142 PITAAAPGTAAAAAAAAAAAAAFGQYQP 169
P+ AAA +AAAAAAAAAAAAA P
Sbjct: 87 PVLAAAQESAAAAAAAAAAAAAVAAAPP 114
>gi|110347461 MYC-associated zinc finger protein isoform 1 [Homo
sapiens]
Length = 477
Score = 41.6 bits (96), Expect = 4e-04
Identities = 40/102 (39%), Positives = 44/102 (43%), Gaps = 11/102 (10%)
Query: 72 PGVVIPHVQPTAAAASTTPY-IDYTGA-AYAQYSAAAAAAAAAAAYDQYPYAASPAAAGY 129
P P PT A + P +D A AQ SAAAAAAAAAAA +PAAA
Sbjct: 62 PFQAAPAPPPTPQAPAAEPLQVDLLPVLAAAQESAAAAAAAAAAAAAVAAAPPAPAAAST 121
Query: 130 VTAGGYGY---------AVQQPITAAAPGTAAAAAAAAAAAA 162
V V P AAP +AA AAAAA A
Sbjct: 122 VDTAALKQPPAPPPPPPPVSAPAAEAAPPASAATIAAAAATA 163
Score = 32.7 bits (73), Expect = 0.17
Identities = 18/28 (64%), Positives = 20/28 (71%)
Query: 142 PITAAAPGTAAAAAAAAAAAAAFGQYQP 169
P+ AAA +AAAAAAAAAAAAA P
Sbjct: 87 PVLAAAQESAAAAAAAAAAAAAVAAAPP 114
Score = 27.3 bits (59), Expect = 7.1
Identities = 23/50 (46%), Positives = 27/50 (54%), Gaps = 6/50 (12%)
Query: 95 TGAAYAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAV-QQPI 143
TG +AAAAAAAAAAA AA P A G + +G G V QP+
Sbjct: 428 TGEVCPMAAAAAAAAAAAAA----AVAAPPTAVGSL-SGAEGVPVSSQPL 472
>gi|122937319 even-skipped homeobox 2 [Homo sapiens]
Length = 476
Score = 41.6 bits (96), Expect = 4e-04
Identities = 34/87 (39%), Positives = 48/87 (55%), Gaps = 7/87 (8%)
Query: 77 PHVQPTAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYG 136
P+ +P + P + AA A ++AA+AAAAAAA A+S AAAG +GG
Sbjct: 328 PYSRPELLCSFRHPGLYQAPAAAAGLNSAASAAAAAAA--AAAAASSAAAAGAPPSGG-- 383
Query: 137 YAVQQPITAAAPGTAAAAAAAAAAAAA 163
P + + ++ +AAAAAAAAAA
Sbjct: 384 ---SAPCSCLSCHSSQSAAAAAAAAAA 407
Score = 40.4 bits (93), Expect = 8e-04
Identities = 33/64 (51%), Positives = 39/64 (60%), Gaps = 12/64 (18%)
Query: 103 SAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAVQQPITA-AAPGTAAAAAAAAAAA 161
SAAAAAAAAAAA A+S AAAG +GG P + + + +AAAAAAAAA
Sbjct: 358 SAAAAAAAAAAA------ASSAAAAGAPPSGG-----SAPCSCLSCHSSQSAAAAAAAAA 406
Query: 162 AAFG 165
AA G
Sbjct: 407 AALG 410
Score = 35.4 bits (80), Expect = 0.026
Identities = 37/121 (30%), Positives = 49/121 (40%), Gaps = 23/121 (19%)
Query: 60 PAHYVYPQAFVQPGVVIPHVQPTAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQYP 119
P+ Y Y +P+ + P++ T AA AAAAA+ AAA P
Sbjct: 258 PSFYTYMMTHAAATGSLPYPFHSHVPLHYYPHVGVTAAA------AAAAASGAAAAASSP 311
Query: 120 YAASPAAAGYVTAGGYGYA-------------VQQPITAA----APGTAAAAAAAAAAAA 162
+A S A + Y+ Q P AA A AAAAAAAAAAA+
Sbjct: 312 FATSIRPLDTFRALSHPYSRPELLCSFRHPGLYQAPAAAAGLNSAASAAAAAAAAAAAAS 371
Query: 163 A 163
+
Sbjct: 372 S 372
Score = 29.6 bits (65), Expect = 1.4
Identities = 31/103 (30%), Positives = 41/103 (39%), Gaps = 14/103 (13%)
Query: 77 PHVQPTAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYD--QYPYAASPAAAGYVTAGG 134
PHV TAAAA+ +GAA A S A + + +PY+ + G
Sbjct: 288 PHVGVTAAAAAAAA----SGAAAAASSPFATSIRPLDTFRALSHPYSRPELLCSFRHPGL 343
Query: 135 YGY--------AVQQPITAAAPGTAAAAAAAAAAAAAFGQYQP 169
Y + AAA AAA++AAAA A G P
Sbjct: 344 YQAPAAAAGLNSAASAAAAAAAAAAAASSAAAAGAPPSGGSAP 386
>gi|13491166 pumilio 1 isoform 2 [Homo sapiens]
Length = 1186
Score = 41.2 bits (95), Expect = 5e-04
Identities = 53/178 (29%), Positives = 71/178 (39%), Gaps = 34/178 (19%)
Query: 18 IDGRKANVNLAYLGAKPRIMQPGFAFGVQQLHPALIQRPFGIPAHYVY----PQAFVQPG 73
+D A V L ++ ++ Q A VQQL A Q+ AH + P AFV
Sbjct: 369 VDSAAATVGLFDYNSQQQLFQRPNALAVQQLTAAQQQQYALAAAHQPHIGLAPAAFVPNP 428
Query: 74 VVI--------PHVQPTAAAAS------------TTPYIDYTGAAYAQYSAAAAAAAAAA 113
+I P+ AAAA+ TP+ Y + + Q +AAAAAA +A
Sbjct: 429 YIISAAPPGTDPYTAGLAAAATLGPAVVPHQYYGVTPWGVYPASLFQQQAAAAAAATNSA 488
Query: 114 AYDQYPYAASPAAAGYVTAGGYGYAVQQPIT-----AAAPGTAAAAAAAAAAAAAFGQ 166
P A V GG A Q+P+T AAAA +A AFGQ
Sbjct: 489 NQQTTPQAQQ--GQQQVLRGG---ASQRPLTPNQNQQGQQTDPLVAAAAVNSALAFGQ 541
Score = 30.8 bits (68), Expect = 0.64
Identities = 28/93 (30%), Positives = 35/93 (37%), Gaps = 3/93 (3%)
Query: 81 PTAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAVQ 140
P +AA+T DY A A A Q YA + A ++ + V
Sbjct: 368 PVDSAAATVGLFDYNSQQQLFQRPNALAVQQLTAAQQQQYALAAAHQPHIGLAPAAF-VP 426
Query: 141 QP--ITAAAPGTAAAAAAAAAAAAAFGQYQPQQ 171
P I+AA PGT A AAAA P Q
Sbjct: 427 NPYIISAAPPGTDPYTAGLAAAATLGPAVVPHQ 459
Score = 28.1 bits (61), Expect = 4.1
Identities = 26/75 (34%), Positives = 31/75 (41%), Gaps = 8/75 (10%)
Query: 97 AAYAQYSAAAAAAAAAAAYDQYPYAASPA----AAGYVTAGGYGYAVQQPITAAAPG--- 149
AA A SA A AA YP A A V G + P+ AP
Sbjct: 529 AAAAVNSALAFGQGLAAGMPGYPVLAPAAYYDQTGALVVNAGARNGLGAPVRLVAPAPVI 588
Query: 150 -TAAAAAAAAAAAAA 163
+++AA AA AAAAA
Sbjct: 589 ISSSAAQAAVAAAAA 603
>gi|66932909 pumilio 1 isoform 1 [Homo sapiens]
Length = 1188
Score = 41.2 bits (95), Expect = 5e-04
Identities = 53/178 (29%), Positives = 71/178 (39%), Gaps = 34/178 (19%)
Query: 18 IDGRKANVNLAYLGAKPRIMQPGFAFGVQQLHPALIQRPFGIPAHYVY----PQAFVQPG 73
+D A V L ++ ++ Q A VQQL A Q+ AH + P AFV
Sbjct: 369 VDSAAATVGLFDYNSQQQLFQRPNALAVQQLTAAQQQQYALAAAHQPHIGLAPAAFVPNP 428
Query: 74 VVI--------PHVQPTAAAAS------------TTPYIDYTGAAYAQYSAAAAAAAAAA 113
+I P+ AAAA+ TP+ Y + + Q +AAAAAA +A
Sbjct: 429 YIISAAPPGTDPYTAGLAAAATLGPAVVPHQYYGVTPWGVYPASLFQQQAAAAAAATNSA 488
Query: 114 AYDQYPYAASPAAAGYVTAGGYGYAVQQPIT-----AAAPGTAAAAAAAAAAAAAFGQ 166
P A V GG A Q+P+T AAAA +A AFGQ
Sbjct: 489 NQQTTPQAQQ--GQQQVLRGG---ASQRPLTPNQNQQGQQTDPLVAAAAVNSALAFGQ 541
Score = 30.8 bits (68), Expect = 0.64
Identities = 28/93 (30%), Positives = 35/93 (37%), Gaps = 3/93 (3%)
Query: 81 PTAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAVQ 140
P +AA+T DY A A A Q YA + A ++ + V
Sbjct: 368 PVDSAAATVGLFDYNSQQQLFQRPNALAVQQLTAAQQQQYALAAAHQPHIGLAPAAF-VP 426
Query: 141 QP--ITAAAPGTAAAAAAAAAAAAAFGQYQPQQ 171
P I+AA PGT A AAAA P Q
Sbjct: 427 NPYIISAAPPGTDPYTAGLAAAATLGPAVVPHQ 459
Score = 28.1 bits (61), Expect = 4.1
Identities = 26/75 (34%), Positives = 31/75 (41%), Gaps = 8/75 (10%)
Query: 97 AAYAQYSAAAAAAAAAAAYDQYPYAASPA----AAGYVTAGGYGYAVQQPITAAAPG--- 149
AA A SA A AA YP A A V G + P+ AP
Sbjct: 529 AAAAVNSALAFGQGLAAGMPGYPVLAPAAYYDQTGALVVNAGARNGLGAPVRLVAPAPVI 588
Query: 150 -TAAAAAAAAAAAAA 163
+++AA AA AAAAA
Sbjct: 589 ISSSAAQAAVAAAAA 603
>gi|126352608 elastin isoform e precursor [Homo sapiens]
Length = 705
Score = 41.2 bits (95), Expect = 5e-04
Identities = 48/144 (33%), Positives = 59/144 (40%), Gaps = 15/144 (10%)
Query: 31 GAKPRIMQPGFAF-GVQQLHPALIQRPFGIPAHYVYPQAFVQPGVVIPHVQP-------- 81
G KP+ G AF G+ + P +P G+P Y + G +P+
Sbjct: 174 GVKPKAPGVGGAFAGIPGVGPFGGPQP-GVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGP 232
Query: 82 --TAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAV 139
A AA Y TG +AAAAAA AAA + P G G G A+
Sbjct: 233 GGVAGAAGKAGYP--TGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPG-AI 289
Query: 140 QQPITAAAPGTAAAAAAAAAAAAA 163
A GT AAAAAAAAAA A
Sbjct: 290 PGIGGIAGVGTPAAAAAAAAAAKA 313
Score = 37.7 bits (86), Expect = 0.005
Identities = 28/60 (46%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 106 AAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAAAAAAAFG 165
A AAA AA Y AA P G + A G G + + A P AAAAA AAA AA FG
Sbjct: 567 ALAAAKAAKYG----AAVPGVLGGLGALG-GVGIPGGVVGAGPAAAAAAAKAAAKAAQFG 621
Score = 32.7 bits (73), Expect = 0.17
Identities = 40/128 (31%), Positives = 44/128 (34%), Gaps = 12/128 (9%)
Query: 39 PGFAFGVQQLHPALIQRPFGIPAHYVYPQAFVQPGVVIPHVQPTAAAASTTPYIDYTGAA 98
PGF GV + P + G+P P PGV I AAAA Y G
Sbjct: 405 PGFGVGVGGI-PGVA----GVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVG 459
Query: 99 YAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAA 158
A A A P A G A G G A PG AAAA +A
Sbjct: 460 VAPGVGVAPGVGVAPGVGLAPGVG--VAPGVGVAPGVGVA-----PGIGPGGVAAAAKSA 512
Query: 159 AAAAAFGQ 166
A AA Q
Sbjct: 513 AKVAAKAQ 520
Score = 32.3 bits (72), Expect = 0.22
Identities = 36/116 (31%), Positives = 41/116 (35%), Gaps = 20/116 (17%)
Query: 72 PGVVIPHVQPTAAAASTTPYIDYTGAAY---AQYSAAAAAAAAAAAYDQYPYAASPAAAG 128
PG +P V A P GAA AAA AAA AA Y P
Sbjct: 337 PGAGVPGVGVPGAGIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPT 396
Query: 129 Y-VTAGGY-GYAVQQ---------------PITAAAPGTAAAAAAAAAAAAAFGQY 167
Y V AGG+ G+ V P PG + A AAAAA +Y
Sbjct: 397 YGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKY 452
Score = 32.0 bits (71), Expect = 0.29
Identities = 53/183 (28%), Positives = 63/183 (34%), Gaps = 34/183 (18%)
Query: 14 PNPIIDGRKANVNLAY--------LGAKPRIMQPGFAFGVQQLHPALIQRPFGIPA---H 62
P ++ G A+ AY LG P + G + G P +P +P
Sbjct: 88 PGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAGAVVPQPGAGVKPGKVPGVGLP 147
Query: 63 YVYPQAFVQ----PGV-VIPHVQPTAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQ 117
VYP + PGV V+P V PT A P G A+A
Sbjct: 148 GVYPGGVLPGARFPGVGVLPGV-PTGAGVK--PKAPGVGGAFAGIPGVGPFGGPQPGVPL 204
Query: 118 -YPYAASPAAAGY---VTAGGYGYAVQQPITAAAPGTA-----------AAAAAAAAAAA 162
YP A GY T G Y A A G A AAAAAAA AAA
Sbjct: 205 GYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAA 264
Query: 163 AFG 165
FG
Sbjct: 265 KFG 267
Score = 32.0 bits (71), Expect = 0.29
Identities = 35/91 (38%), Positives = 39/91 (42%), Gaps = 21/91 (23%)
Query: 96 GAAYAQYSAAAAAAAAAAAYDQYPYAA---------SPAAAGYVTAGGYGYAVQQ---PI 143
G A AAAAAAAAAA +Y AA P G AG G V P+
Sbjct: 294 GIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPV 353
Query: 144 T-------AAAPGTAA--AAAAAAAAAAAFG 165
AA PG + AAA AAA AA +G
Sbjct: 354 VPGAGIPGAAVPGVVSPEAAAKAAAKAAKYG 384
Score = 30.4 bits (67), Expect = 0.84
Identities = 38/109 (34%), Positives = 41/109 (37%), Gaps = 9/109 (8%)
Query: 60 PAHYVYPQAFVQPGV-VIPHVQP--TAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYD 116
P V P V PGV V P + P AAAA + + AA AQ AAA A
Sbjct: 480 PGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKV----AAKAQLRAAAGLGAGIPGLG 535
Query: 117 QYPYAASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAAAAAAAFG 165
V G G V P A PG AAA AA AA G
Sbjct: 536 VGVGVPGLGVGAGVPGLGVGAGV--PGFGAVPGALAAAKAAKYGAAVPG 582
Score = 29.3 bits (64), Expect = 1.9
Identities = 27/70 (38%), Positives = 31/70 (44%), Gaps = 5/70 (7%)
Query: 96 GAAYAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAA 155
G A +AAAAAA AAA Q+ + A G + GG G P G AAA
Sbjct: 598 GVVGAGPAAAAAAAKAAAKAAQFGLVGA-AGLGGLGVGGLGV----PGVGGLGGIPPAAA 652
Query: 156 AAAAAAAAFG 165
A AA A G
Sbjct: 653 AKAAKYGAAG 662
>gi|126352446 elastin isoform d precursor [Homo sapiens]
Length = 711
Score = 41.2 bits (95), Expect = 5e-04
Identities = 48/144 (33%), Positives = 59/144 (40%), Gaps = 15/144 (10%)
Query: 31 GAKPRIMQPGFAF-GVQQLHPALIQRPFGIPAHYVYPQAFVQPGVVIPHVQP-------- 81
G KP+ G AF G+ + P +P G+P Y + G +P+
Sbjct: 179 GVKPKAPGVGGAFAGIPGVGPFGGPQP-GVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGP 237
Query: 82 --TAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAV 139
A AA Y TG +AAAAAA AAA + P G G G A+
Sbjct: 238 GGVAGAAGKAGYP--TGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPG-AI 294
Query: 140 QQPITAAAPGTAAAAAAAAAAAAA 163
A GT AAAAAAAAAA A
Sbjct: 295 PGIGGIAGVGTPAAAAAAAAAAKA 318
Score = 37.7 bits (86), Expect = 0.005
Identities = 28/60 (46%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 106 AAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAAAAAAAFG 165
A AAA AA Y AA P G + A G G + + A P AAAAA AAA AA FG
Sbjct: 591 ALAAAKAAKYG----AAVPGVLGGLGALG-GVGIPGGVVGAGPAAAAAAAKAAAKAAQFG 645
Score = 35.8 bits (81), Expect = 0.020
Identities = 47/138 (34%), Positives = 53/138 (38%), Gaps = 23/138 (16%)
Query: 39 PGFAFGVQQLHPALIQRPFGIPAHYVYPQAFVQPGVVIPHVQPTAAAASTTPYIDYTGAA 98
PGF GV + P + G+P P PGV I AAAA Y T AA
Sbjct: 410 PGFGVGVGGI-PGVA----GVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAA 464
Query: 99 YAQYSAAAAAAAAAAAYDQYP-YAASP---AAAGYVTAGGYGYAV---------QQPITA 145
AAA AAA AA + P +P A G A G G A P
Sbjct: 465 -----AAAKAAAKAAQFGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVG 519
Query: 146 AAPGTAAAAAAAAAAAAA 163
APG AAAA +AA
Sbjct: 520 VAPGIGPGGVAAAAKSAA 537
Score = 34.3 bits (77), Expect = 0.058
Identities = 55/170 (32%), Positives = 62/170 (36%), Gaps = 15/170 (8%)
Query: 2 ADRAAAERACKDP--NPIIDGRKANVNLAYLGAKPRIMQPGFAFGVQQLHPALIQRPFGI 59
A AAA +A K P KA A G P + G A GV + G+
Sbjct: 446 AQAAAAAKAAKYGVGTPAAAAAKAAAKAAQFGLVPGV---GVAPGVGVAPGVGVAPGVGL 502
Query: 60 -PAHYVYPQAFVQPGV-VIPHVQP--TAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAY 115
P V P V PGV V P + P AAAA + + AA AQ AAA A
Sbjct: 503 APGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKV----AAKAQLRAAAGLGAGIPGL 558
Query: 116 DQYPYAASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAAAAAAAFG 165
V G G V P A PG AAA AA AA G
Sbjct: 559 GVGVGVPGLGVGAGVPGLGVGAGV--PGFGAVPGALAAAKAAKYGAAVPG 606
Score = 32.3 bits (72), Expect = 0.22
Identities = 36/121 (29%), Positives = 41/121 (33%), Gaps = 23/121 (19%)
Query: 72 PGVVIPHVQPTAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVT 131
PG +P V A P GAA + AAA AAA +Y G T
Sbjct: 342 PGAGVPGVGVPGAGIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPT 401
Query: 132 AG-------GYGYAVQQ-PITAAAPGTAA---------------AAAAAAAAAAAFGQYQ 168
G G+G V P A PG A AAAAA AA +G
Sbjct: 402 YGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGT 461
Query: 169 P 169
P
Sbjct: 462 P 462
Score = 32.0 bits (71), Expect = 0.29
Identities = 35/91 (38%), Positives = 39/91 (42%), Gaps = 21/91 (23%)
Query: 96 GAAYAQYSAAAAAAAAAAAYDQYPYAA---------SPAAAGYVTAGGYGYAVQQ---PI 143
G A AAAAAAAAAA +Y AA P G AG G V P+
Sbjct: 299 GIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPV 358
Query: 144 T-------AAAPGTAA--AAAAAAAAAAAFG 165
AA PG + AAA AAA AA +G
Sbjct: 359 VPGAGIPGAAVPGVVSPEAAAKAAAKAAKYG 389
Score = 30.0 bits (66), Expect = 1.1
Identities = 21/48 (43%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Query: 119 PYAASPAAAGYVTAGGYGYAVQQPI-TAAAPGTAAAAAAAAAAAAAFG 165
PY GY G G A + T G AAAAAAA AAA FG
Sbjct: 225 PYTTGKLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFG 272
Score = 28.9 bits (63), Expect = 2.4
Identities = 24/66 (36%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Query: 96 GAAYAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAA 155
G A +AAAAAA AAA Q+ + A G + GG G + P AA AA
Sbjct: 622 GVVGAGPAAAAAAAKAAAKAAQFGLVGA-AGLGGLGVGGLGVPGVGGLGGIPPAAAAKAA 680
Query: 156 AAAAAA 161
AA
Sbjct: 681 KYGVAA 686
>gi|126352322 elastin isoform c precursor [Homo sapiens]
Length = 692
Score = 41.2 bits (95), Expect = 5e-04
Identities = 48/144 (33%), Positives = 59/144 (40%), Gaps = 15/144 (10%)
Query: 31 GAKPRIMQPGFAF-GVQQLHPALIQRPFGIPAHYVYPQAFVQPGVVIPHVQP-------- 81
G KP+ G AF G+ + P +P G+P Y + G +P+
Sbjct: 179 GVKPKAPGVGGAFAGIPGVGPFGGPQP-GVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGP 237
Query: 82 --TAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAV 139
A AA Y TG +AAAAAA AAA + P G G G A+
Sbjct: 238 GGVAGAAGKAGYP--TGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPG-AI 294
Query: 140 QQPITAAAPGTAAAAAAAAAAAAA 163
A GT AAAAAAAAAA A
Sbjct: 295 PGIGGIAGVGTPAAAAAAAAAAKA 318
Score = 37.7 bits (86), Expect = 0.005
Identities = 28/60 (46%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 106 AAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAAAAAAAFG 165
A AAA AA Y AA P G + A G G + + A P AAAAA AAA AA FG
Sbjct: 572 ALAAAKAAKYG----AAVPGVLGGLGALG-GVGIPGGVVGAGPAAAAAAAKAAAKAAQFG 626
Score = 32.7 bits (73), Expect = 0.17
Identities = 40/128 (31%), Positives = 44/128 (34%), Gaps = 12/128 (9%)
Query: 39 PGFAFGVQQLHPALIQRPFGIPAHYVYPQAFVQPGVVIPHVQPTAAAASTTPYIDYTGAA 98
PGF GV + P + G+P P PGV I AAAA Y G
Sbjct: 410 PGFGVGVGGI-PGVA----GVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVG 464
Query: 99 YAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAA 158
A A A P A G A G G A PG AAAA +A
Sbjct: 465 VAPGVGVAPGVGVAPGVGLAPGVG--VAPGVGVAPGVGVA-----PGIGPGGVAAAAKSA 517
Query: 159 AAAAAFGQ 166
A AA Q
Sbjct: 518 AKVAAKAQ 525
Score = 32.3 bits (72), Expect = 0.22
Identities = 36/116 (31%), Positives = 41/116 (35%), Gaps = 20/116 (17%)
Query: 72 PGVVIPHVQPTAAAASTTPYIDYTGAAY---AQYSAAAAAAAAAAAYDQYPYAASPAAAG 128
PG +P V A P GAA AAA AAA AA Y P
Sbjct: 342 PGAGVPGVGVPGAGIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPT 401
Query: 129 Y-VTAGGY-GYAVQQ---------------PITAAAPGTAAAAAAAAAAAAAFGQY 167
Y V AGG+ G+ V P PG + A AAAAA +Y
Sbjct: 402 YGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKY 457
Score = 32.0 bits (71), Expect = 0.29
Identities = 35/91 (38%), Positives = 39/91 (42%), Gaps = 21/91 (23%)
Query: 96 GAAYAQYSAAAAAAAAAAAYDQYPYAA---------SPAAAGYVTAGGYGYAVQQ---PI 143
G A AAAAAAAAAA +Y AA P G AG G V P+
Sbjct: 299 GIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPV 358
Query: 144 T-------AAAPGTAA--AAAAAAAAAAAFG 165
AA PG + AAA AAA AA +G
Sbjct: 359 VPGAGIPGAAVPGVVSPEAAAKAAAKAAKYG 389
Score = 30.4 bits (67), Expect = 0.84
Identities = 38/109 (34%), Positives = 41/109 (37%), Gaps = 9/109 (8%)
Query: 60 PAHYVYPQAFVQPGV-VIPHVQP--TAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYD 116
P V P V PGV V P + P AAAA + + AA AQ AAA A
Sbjct: 485 PGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKV----AAKAQLRAAAGLGAGIPGLG 540
Query: 117 QYPYAASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAAAAAAAFG 165
V G G V P A PG AAA AA AA G
Sbjct: 541 VGVGVPGLGVGAGVPGLGVGAGV--PGFGAVPGALAAAKAAKYGAAVPG 587
Score = 30.0 bits (66), Expect = 1.1
Identities = 21/48 (43%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Query: 119 PYAASPAAAGYVTAGGYGYAVQQPI-TAAAPGTAAAAAAAAAAAAAFG 165
PY GY G G A + T G AAAAAAA AAA FG
Sbjct: 225 PYTTGKLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFG 272
Score = 28.9 bits (63), Expect = 2.4
Identities = 24/66 (36%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Query: 96 GAAYAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAA 155
G A +AAAAAA AAA Q+ + A G + GG G + P AA AA
Sbjct: 603 GVVGAGPAAAAAAAKAAAKAAQFGLVGA-AGLGGLGVGGLGVPGVGGLGGIPPAAAAKAA 661
Query: 156 AAAAAA 161
AA
Sbjct: 662 KYGVAA 667
>gi|126352700 elastin isoform b precursor [Homo sapiens]
Length = 677
Score = 41.2 bits (95), Expect = 5e-04
Identities = 48/144 (33%), Positives = 59/144 (40%), Gaps = 15/144 (10%)
Query: 31 GAKPRIMQPGFAF-GVQQLHPALIQRPFGIPAHYVYPQAFVQPGVVIPHVQP-------- 81
G KP+ G AF G+ + P +P G+P Y + G +P+
Sbjct: 164 GVKPKAPGVGGAFAGIPGVGPFGGPQP-GVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGP 222
Query: 82 --TAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAV 139
A AA Y TG +AAAAAA AAA + P G G G A+
Sbjct: 223 GGVAGAAGKAGYP--TGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPG-AI 279
Query: 140 QQPITAAAPGTAAAAAAAAAAAAA 163
A GT AAAAAAAAAA A
Sbjct: 280 PGIGGIAGVGTPAAAAAAAAAAKA 303
Score = 37.7 bits (86), Expect = 0.005
Identities = 28/60 (46%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 106 AAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAAAAAAAFG 165
A AAA AA Y AA P G + A G G + + A P AAAAA AAA AA FG
Sbjct: 557 ALAAAKAAKYG----AAVPGVLGGLGALG-GVGIPGGVVGAGPAAAAAAAKAAAKAAQFG 611
Score = 32.7 bits (73), Expect = 0.17
Identities = 40/128 (31%), Positives = 44/128 (34%), Gaps = 12/128 (9%)
Query: 39 PGFAFGVQQLHPALIQRPFGIPAHYVYPQAFVQPGVVIPHVQPTAAAASTTPYIDYTGAA 98
PGF GV + P + G+P P PGV I AAAA Y G
Sbjct: 395 PGFGVGVGGI-PGVA----GVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVG 449
Query: 99 YAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAA 158
A A A P A G A G G A PG AAAA +A
Sbjct: 450 VAPGVGVAPGVGVAPGVGLAPGVG--VAPGVGVAPGVGVA-----PGIGPGGVAAAAKSA 502
Query: 159 AAAAAFGQ 166
A AA Q
Sbjct: 503 AKVAAKAQ 510
Score = 32.3 bits (72), Expect = 0.22
Identities = 36/116 (31%), Positives = 41/116 (35%), Gaps = 20/116 (17%)
Query: 72 PGVVIPHVQPTAAAASTTPYIDYTGAAY---AQYSAAAAAAAAAAAYDQYPYAASPAAAG 128
PG +P V A P GAA AAA AAA AA Y P
Sbjct: 327 PGAGVPGVGVPGAGIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPT 386
Query: 129 Y-VTAGGY-GYAVQQ---------------PITAAAPGTAAAAAAAAAAAAAFGQY 167
Y V AGG+ G+ V P PG + A AAAAA +Y
Sbjct: 387 YGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKY 442
Score = 32.0 bits (71), Expect = 0.29
Identities = 53/183 (28%), Positives = 63/183 (34%), Gaps = 34/183 (18%)
Query: 14 PNPIIDGRKANVNLAY--------LGAKPRIMQPGFAFGVQQLHPALIQRPFGIPA---H 62
P ++ G A+ AY LG P + G + G P +P +P
Sbjct: 78 PGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAGAVVPQPGAGVKPGKVPGVGLP 137
Query: 63 YVYPQAFVQ----PGV-VIPHVQPTAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQ 117
VYP + PGV V+P V PT A P G A+A
Sbjct: 138 GVYPGGVLPGARFPGVGVLPGV-PTGAGVK--PKAPGVGGAFAGIPGVGPFGGPQPGVPL 194
Query: 118 -YPYAASPAAAGY---VTAGGYGYAVQQPITAAAPGTA-----------AAAAAAAAAAA 162
YP A GY T G Y A A G A AAAAAAA AAA
Sbjct: 195 GYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAA 254
Query: 163 AFG 165
FG
Sbjct: 255 KFG 257
Score = 32.0 bits (71), Expect = 0.29
Identities = 35/91 (38%), Positives = 39/91 (42%), Gaps = 21/91 (23%)
Query: 96 GAAYAQYSAAAAAAAAAAAYDQYPYAA---------SPAAAGYVTAGGYGYAVQQ---PI 143
G A AAAAAAAAAA +Y AA P G AG G V P+
Sbjct: 284 GIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPV 343
Query: 144 T-------AAAPGTAA--AAAAAAAAAAAFG 165
AA PG + AAA AAA AA +G
Sbjct: 344 VPGAGIPGAAVPGVVSPEAAAKAAAKAAKYG 374
Score = 30.4 bits (67), Expect = 0.84
Identities = 38/109 (34%), Positives = 41/109 (37%), Gaps = 9/109 (8%)
Query: 60 PAHYVYPQAFVQPGV-VIPHVQP--TAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYD 116
P V P V PGV V P + P AAAA + + AA AQ AAA A
Sbjct: 470 PGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKV----AAKAQLRAAAGLGAGIPGLG 525
Query: 117 QYPYAASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAAAAAAAFG 165
V G G V P A PG AAA AA AA G
Sbjct: 526 VGVGVPGLGVGAGVPGLGVGAGV--PGFGAVPGALAAAKAAKYGAAVPG 572
Score = 28.9 bits (63), Expect = 2.4
Identities = 24/66 (36%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Query: 96 GAAYAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAA 155
G A +AAAAAA AAA Q+ + A G + GG G + P AA AA
Sbjct: 588 GVVGAGPAAAAAAAKAAAKAAQFGLVGA-AGLGGLGVGGLGVPGVGGLGGIPPAAAAKAA 646
Query: 156 AAAAAA 161
AA
Sbjct: 647 KYGVAA 652
>gi|126352440 elastin isoform a precursor [Homo sapiens]
Length = 724
Score = 41.2 bits (95), Expect = 5e-04
Identities = 48/144 (33%), Positives = 59/144 (40%), Gaps = 15/144 (10%)
Query: 31 GAKPRIMQPGFAF-GVQQLHPALIQRPFGIPAHYVYPQAFVQPGVVIPHVQP-------- 81
G KP+ G AF G+ + P +P G+P Y + G +P+
Sbjct: 174 GVKPKAPGVGGAFAGIPGVGPFGGPQP-GVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGP 232
Query: 82 --TAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAV 139
A AA Y TG +AAAAAA AAA + P G G G A+
Sbjct: 233 GGVAGAAGKAGYP--TGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPG-AI 289
Query: 140 QQPITAAAPGTAAAAAAAAAAAAA 163
A GT AAAAAAAAAA A
Sbjct: 290 PGIGGIAGVGTPAAAAAAAAAAKA 313
Score = 37.7 bits (86), Expect = 0.005
Identities = 28/60 (46%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 106 AAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAAAAAAAFG 165
A AAA AA Y AA P G + A G G + + A P AAAAA AAA AA FG
Sbjct: 586 ALAAAKAAKYG----AAVPGVLGGLGALG-GVGIPGGVVGAGPAAAAAAAKAAAKAAQFG 640
Score = 35.8 bits (81), Expect = 0.020
Identities = 47/138 (34%), Positives = 53/138 (38%), Gaps = 23/138 (16%)
Query: 39 PGFAFGVQQLHPALIQRPFGIPAHYVYPQAFVQPGVVIPHVQPTAAAASTTPYIDYTGAA 98
PGF GV + P + G+P P PGV I AAAA Y T AA
Sbjct: 405 PGFGVGVGGI-PGVA----GVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAA 459
Query: 99 YAQYSAAAAAAAAAAAYDQYP-YAASP---AAAGYVTAGGYGYAV---------QQPITA 145
AAA AAA AA + P +P A G A G G A P
Sbjct: 460 -----AAAKAAAKAAQFGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVG 514
Query: 146 AAPGTAAAAAAAAAAAAA 163
APG AAAA +AA
Sbjct: 515 VAPGIGPGGVAAAAKSAA 532
Score = 34.3 bits (77), Expect = 0.058
Identities = 55/170 (32%), Positives = 62/170 (36%), Gaps = 15/170 (8%)
Query: 2 ADRAAAERACKDP--NPIIDGRKANVNLAYLGAKPRIMQPGFAFGVQQLHPALIQRPFGI 59
A AAA +A K P KA A G P + G A GV + G+
Sbjct: 441 AQAAAAAKAAKYGVGTPAAAAAKAAAKAAQFGLVPGV---GVAPGVGVAPGVGVAPGVGL 497
Query: 60 -PAHYVYPQAFVQPGV-VIPHVQP--TAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAY 115
P V P V PGV V P + P AAAA + + AA AQ AAA A
Sbjct: 498 APGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKV----AAKAQLRAAAGLGAGIPGL 553
Query: 116 DQYPYAASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAAAAAAAFG 165
V G G V P A PG AAA AA AA G
Sbjct: 554 GVGVGVPGLGVGAGVPGLGVGAGV--PGFGAVPGALAAAKAAKYGAAVPG 601
Score = 32.3 bits (72), Expect = 0.22
Identities = 36/121 (29%), Positives = 41/121 (33%), Gaps = 23/121 (19%)
Query: 72 PGVVIPHVQPTAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVT 131
PG +P V A P GAA + AAA AAA +Y G T
Sbjct: 337 PGAGVPGVGVPGAGIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPT 396
Query: 132 AG-------GYGYAVQQ-PITAAAPGTAA---------------AAAAAAAAAAAFGQYQ 168
G G+G V P A PG A AAAAA AA +G
Sbjct: 397 YGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGT 456
Query: 169 P 169
P
Sbjct: 457 P 457
Score = 32.0 bits (71), Expect = 0.29
Identities = 53/183 (28%), Positives = 63/183 (34%), Gaps = 34/183 (18%)
Query: 14 PNPIIDGRKANVNLAY--------LGAKPRIMQPGFAFGVQQLHPALIQRPFGIPA---H 62
P ++ G A+ AY LG P + G + G P +P +P
Sbjct: 88 PGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAGAVVPQPGAGVKPGKVPGVGLP 147
Query: 63 YVYPQAFVQ----PGV-VIPHVQPTAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQ 117
VYP + PGV V+P V PT A P G A+A
Sbjct: 148 GVYPGGVLPGARFPGVGVLPGV-PTGAGVK--PKAPGVGGAFAGIPGVGPFGGPQPGVPL 204
Query: 118 -YPYAASPAAAGY---VTAGGYGYAVQQPITAAAPGTA-----------AAAAAAAAAAA 162
YP A GY T G Y A A G A AAAAAAA AAA
Sbjct: 205 GYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAA 264
Query: 163 AFG 165
FG
Sbjct: 265 KFG 267
Score = 32.0 bits (71), Expect = 0.29
Identities = 35/91 (38%), Positives = 39/91 (42%), Gaps = 21/91 (23%)
Query: 96 GAAYAQYSAAAAAAAAAAAYDQYPYAA---------SPAAAGYVTAGGYGYAVQQ---PI 143
G A AAAAAAAAAA +Y AA P G AG G V P+
Sbjct: 294 GIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPV 353
Query: 144 T-------AAAPGTAA--AAAAAAAAAAAFG 165
AA PG + AAA AAA AA +G
Sbjct: 354 VPGAGIPGAAVPGVVSPEAAAKAAAKAAKYG 384
Score = 29.3 bits (64), Expect = 1.9
Identities = 27/70 (38%), Positives = 31/70 (44%), Gaps = 5/70 (7%)
Query: 96 GAAYAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAA 155
G A +AAAAAA AAA Q+ + A G + GG G P G AAA
Sbjct: 617 GVVGAGPAAAAAAAKAAAKAAQFGLVGA-AGLGGLGVGGLGV----PGVGGLGGIPPAAA 671
Query: 156 AAAAAAAAFG 165
A AA A G
Sbjct: 672 AKAAKYGAAG 681
>gi|5902108 SRY-box 21 [Homo sapiens]
Length = 276
Score = 41.2 bits (95), Expect = 5e-04
Identities = 38/108 (35%), Positives = 48/108 (44%), Gaps = 17/108 (15%)
Query: 72 PGVVIPHVQPTAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQYPYAA--------- 122
P ++ + + AAAA+ + SAAAAAAAAAAA PY+
Sbjct: 127 PESLLANPEKAAAAAAAA-----AARVFFPQSAAAAAAAAAAAAAGSPYSLLDLGSKMAE 181
Query: 123 -SPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAAAAAAAFGQYQP 169
S +++G A GY A G AAAAAAAAAAA P
Sbjct: 182 ISSSSSGLPYASSLGYPTAG--AGAFHGAAAAAAAAAAAAGGHTHSHP 227
Score = 40.8 bits (94), Expect = 6e-04
Identities = 44/125 (35%), Positives = 55/125 (44%), Gaps = 19/125 (15%)
Query: 49 HPALIQRPFGIPAHYVYPQAFVQPGVVIPHVQPTAAAASTTPYIDYTGAAYAQYSAAAAA 108
HPAL G H V ++ + AAAA+ + + +A +AAAAA
Sbjct: 108 HPAL---KAGAGLHAGAGGGLVPESLLANPEKAAAAAAAAAARVFFPQSA----AAAAAA 160
Query: 109 AAAAAAYDQYPY--------AASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAAAA 160
AAAAAA Y S +++G A GY P A AAAAAAAAA
Sbjct: 161 AAAAAAGSPYSLLDLGSKMAEISSSSSGLPYASSLGY----PTAGAGAFHGAAAAAAAAA 216
Query: 161 AAAFG 165
AAA G
Sbjct: 217 AAAGG 221
Score = 26.9 bits (58), Expect = 9.2
Identities = 20/47 (42%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Query: 120 YAASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAAAAAAAFGQ 166
+ A A AG G G + + A P AAAAAAAAAA F Q
Sbjct: 108 HPALKAGAGLHAGAGGGLVPESLL--ANPEKAAAAAAAAAARVFFPQ 152
>gi|73476377 LBXCOR1 homolog [Homo sapiens]
Length = 921
Score = 40.8 bits (94), Expect = 6e-04
Identities = 51/168 (30%), Positives = 61/168 (36%), Gaps = 33/168 (19%)
Query: 34 PRIMQPGFAFGV-QQLHPALIQRPFGIPAHYVYPQAFVQP-------------------- 72
P I P FG+ Q+L P L P+G P + P
Sbjct: 329 PVIPVPSKGFGLLQKLPPPLFPHPYGFPTAFGLCPKKDDPVLGAGEPKGGPGTGSGGGGA 388
Query: 73 -------GVVIPHVQPTAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQYP-YAASP 124
G H+ P A A + + AAA AAAAAA YP +
Sbjct: 389 GTGGGAGGPGASHLPPGAGAGPGGGAMFWGHQPSGAAKDAAAVAAAAAAATVYPTFPMFW 448
Query: 125 AAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAAAAAAAFGQYQPQQL 172
AAG + Y A Q AA A AAAAAAAAAA G P+ L
Sbjct: 449 PAAGSLPVPSYPAAQSQAKAVAA----AVAAAAAAAAAAAGSGAPEPL 492
Score = 26.9 bits (58), Expect = 9.2
Identities = 26/82 (31%), Positives = 34/82 (41%), Gaps = 16/82 (19%)
Query: 85 AASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAVQQPIT 144
AA + P Y AA +Q A AAA AAAAA AA+ AA G +P+
Sbjct: 450 AAGSLPVPSYP-AAQSQAKAVAAAVAAAAA------AAAAAA---------GSGAPEPLD 493
Query: 145 AAAPGTAAAAAAAAAAAAAFGQ 166
A P + A +A +
Sbjct: 494 GAEPAKESGLGAEERCPSALSR 515
>gi|6912372 forkhead box D3 [Homo sapiens]
Length = 478
Score = 40.4 bits (93), Expect = 8e-04
Identities = 38/96 (39%), Positives = 43/96 (44%), Gaps = 13/96 (13%)
Query: 83 AAAASTTPYIDYTGAAYAQYS-AAAAAAAAAAAYDQYPYAASPA------AAGYVTAGGY 135
AA PY + AA YS AAAAAAAAAA QYPYA P A + +G
Sbjct: 267 AAGPYGRPYGLHPAAAAGAYSHPAAAAAAAAAAALQYPYALPPVAPVLPPAVPLLPSGEL 326
Query: 136 GYAVQQPITAAAPG------TAAAAAAAAAAAAAFG 165
G + PG + AAAAAA A A G
Sbjct: 327 GRKAAAFGSQLGPGLQLQLNSLGAAAAAAGTAGAAG 362
Score = 32.7 bits (73), Expect = 0.17
Identities = 30/70 (42%), Positives = 34/70 (48%), Gaps = 21/70 (30%)
Query: 98 AYAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAA 157
++ YS AAAA AA Y + PY PAAA AG Y + AAAA
Sbjct: 255 SFGAYSLAAAAGAAGP-YGR-PYGLHPAAA----AGAYSHP---------------AAAA 293
Query: 158 AAAAAAFGQY 167
AAAAAA QY
Sbjct: 294 AAAAAAALQY 303
Score = 27.3 bits (59), Expect = 7.1
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Query: 63 YVYPQAFVQPGVVIPHVQPTAAAASTT---PYIDYT-GAAYAQYSAAAAAAAAAAAYDQY 118
++ P VQ ++ QP + + +T P + + Q +A+AAAAAAAAA ++
Sbjct: 416 FLRPPGTVQSAALMATHQPLSLSRTTATIAPILSVPLSGQFLQPAASAAAAAAAAAQAKW 475
Query: 119 P 119
P
Sbjct: 476 P 476
Score = 26.9 bits (58), Expect = 9.2
Identities = 31/93 (33%), Positives = 39/93 (41%), Gaps = 15/93 (16%)
Query: 83 AAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAVQQP 142
AAA + PY G Y + AAAA A + +P AA+ AAA A Y YA+ P
Sbjct: 263 AAAGAAGPY----GRPYGLHPAAAAGAYS------HPAAAAAAAA--AAALQYPYAL-PP 309
Query: 143 ITAAAPGTA--AAAAAAAAAAAAFGQYQPQQLQ 173
+ P + AAAFG LQ
Sbjct: 310 VAPVLPPAVPLLPSGELGRKAAAFGSQLGPGLQ 342
>gi|148762982 hypothetical protein LOC387640 [Homo sapiens]
Length = 908
Score = 40.4 bits (93), Expect = 8e-04
Identities = 38/98 (38%), Positives = 45/98 (45%), Gaps = 26/98 (26%)
Query: 94 YTGAAYAQYSAAAAAAAAAAAYDQYPYAAS----PAAAGYVTAGGYGYAVQQ-------- 141
+ AA A +AAAAAAAAAAA Y +A+ AAAG G Y ++
Sbjct: 222 HPAAAAAAAAAAAAAAAAAAAAAYYQVSAAGPQPKAAAGAGGPGSLSYRCKRKRGGAKDC 281
Query: 142 --------------PITAAAPGTAAAAAAAAAAAAAFG 165
P + A AAAAAAAAAAAAA G
Sbjct: 282 LLAPHAGARRLLLLPRSYKAKAAAAAAAAAAAAAAAAG 319
Score = 37.4 bits (85), Expect = 0.007
Identities = 39/95 (41%), Positives = 42/95 (44%), Gaps = 30/95 (31%)
Query: 97 AAYAQYSAAAAAAAAAAAYDQYPYAASP---AAAGYVTAGGYGYAVQQP----------- 142
AA A +AAAAAAAAAAAY Q AA P AAAG G Y ++
Sbjct: 227 AAAAAAAAAAAAAAAAAAYYQVS-AAGPQPKAAAGAGGPGSLSYRCKRKRGGAKDCLLAP 285
Query: 143 ---------------ITAAAPGTAAAAAAAAAAAA 162
AAA AAAAAAAAAA A
Sbjct: 286 HAGARRLLLLPRSYKAKAAAAAAAAAAAAAAAAGA 320
Score = 34.7 bits (78), Expect = 0.044
Identities = 44/142 (30%), Positives = 56/142 (39%), Gaps = 26/142 (18%)
Query: 32 AKPRIMQPGFAFGVQQLHPAL--IQRPFGIPAHYVYP-QAFVQPGVVIPHVQPTAAAAST 88
A PR PGF QL L RP I A P A +P +P +
Sbjct: 125 ASPR---PGFWKDKHQLWRGLSGAARPLPISAQSQRPGAAAARPAAHLPQI--------- 172
Query: 89 TPYIDYTGAAYAQYSAAAAAAAAAAAYDQYP----YAASPAAAGYVTAGGYGYAVQQPIT 144
+ Y G+ Y + + Y+ P Y A P+ Y + + P
Sbjct: 173 --FSKYPGSHYPEI--VRSPCKPPLNYETAPLQGNYVAFPSDPAYFRSL---LCSKHPAA 225
Query: 145 AAAPGTAAAAAAAAAAAAAFGQ 166
AAA AAAAAAAAAAAAA+ Q
Sbjct: 226 AAAAAAAAAAAAAAAAAAAYYQ 247
Score = 32.3 bits (72), Expect = 0.22
Identities = 18/24 (75%), Positives = 18/24 (75%)
Query: 145 AAAPGTAAAAAAAAAAAAAFGQYQ 168
AAA AAAAAAAAAAAAA YQ
Sbjct: 224 AAAAAAAAAAAAAAAAAAAAAYYQ 247
>gi|5454064 RNA binding motif protein 14 [Homo sapiens]
Length = 669
Score = 39.3 bits (90), Expect = 0.002
Identities = 32/85 (37%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 82 TAAAASTTPYIDYTGAAYAQYSAAAAAA--AAAAAYDQYPYAASPA-AAGYVTAGGYGYA 138
T AAS+ A+Y SAA++ A A AA+Y+ P A+ A +A Y Y+
Sbjct: 367 TQGAASSLGSYGAQAASYGAQSAASSLAYGAQAASYNAQPSASYNAQSAPYAAQQAASYS 426
Query: 139 VQQPITAAAPGTAAAAAAAAAAAAA 163
Q A P TAAA A+ AA AA
Sbjct: 427 SQPAAYVAQPATAAAYASQPAAYAA 451
Score = 37.4 bits (85), Expect = 0.007
Identities = 36/100 (36%), Positives = 46/100 (46%), Gaps = 14/100 (14%)
Query: 78 HVQPTAAA-ASTTPYIDYTGAAYAQYSAA-AAAAAAAAAYDQYPYAASPAAAGYVTAGGY 135
+ QP+A+ A + PY A+Y+ AA A A AAAY P AA A A AG Y
Sbjct: 403 NAQPSASYNAQSAPYAAQQAASYSSQPAAYVAQPATAAAYASQP-AAYAAQATTPMAGSY 461
Query: 136 GYAVQQPITAAAPGTAAAAAA--------AAAAAAAFGQY 167
G QP+ + A A+ A +AAAA G Y
Sbjct: 462 G---AQPVVQTQLNSYGAQASMGLSGSYGAQSAAAATGSY 498
Score = 36.6 bits (83), Expect = 0.012
Identities = 41/120 (34%), Positives = 52/120 (43%), Gaps = 12/120 (10%)
Query: 66 PQAFV-QPGVVIPHV-QPTA-AAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQYPYAA 122
P A+V QP + QP A AA +TTP GA + + A A+ Y A
Sbjct: 429 PAAYVAQPATAAAYASQPAAYAAQATTPMAGSYGAQPVVQTQLNSYGAQASMGLSGSYGA 488
Query: 123 SPAAAGYVTAGGYG----YAVQQPITAAAPGTAAAAAAAAAAAAAFGQYQPQQLQTDRMQ 178
AAA G YG Y Q T AAP ++A+ AA+ AA Q PQ + R Q
Sbjct: 489 QSAAAA---TGSYGAAAAYGAQPSATLAAPYRTQSSASLAASYAA--QQHPQAAASYRGQ 543
Score = 31.2 bits (69), Expect = 0.49
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 18/96 (18%)
Query: 82 TAAAASTTPY--IDYTGAAYAQYSAAAAAAAAAAAYDQY-----PYAASPAAAGYVTAGG 134
+AAA+S PY + +A + Y AAAA++ +Y Y P++ G A
Sbjct: 296 SAAASSLGPYGGAQPSASALSSYGGQAAAASSLNSYGAQGSSLASYGNQPSSYGAQAASS 355
Query: 135 YGYAVQQPITAAA-----PGTAAAAAAAAAAAAAFG 165
YG + AAA G A++ + A AA++G
Sbjct: 356 YG------VRAAASSYNTQGAASSLGSYGAQAASYG 385
Score = 30.8 bits (68), Expect = 0.64
Identities = 47/174 (27%), Positives = 68/174 (39%), Gaps = 29/174 (16%)
Query: 18 IDGRKANVNLAYLGAKPRIMQPGFAF--GVQQLHPALIQRPF----GIPAHYVYPQAFVQ 71
+ G++ NV L+ G K PG A G + P F G A + Y QAF
Sbjct: 137 VKGKRINVELSTKGQKKG---PGLAVQSGDKTKKPGAGDTAFPGTGGFSATFDYQQAFGN 193
Query: 72 P--GVVIPHVQPT--------AAAASTTPYIDYTGAAYAQYSA--AAAAAAAAAAYDQYP 119
G QPT + + P Y AQ + A + + AAY P
Sbjct: 194 STGGFDGQARQPTPPFFGRDRSPLRRSPPRASYVAPLTAQPATYRAQPSVSLGAAYRAQP 253
Query: 120 YAASPAAAGY----VTAGGYGYAVQQPITAAAP--GTAAAAAAAAAAAAAFGQY 167
A+ GY +TA Y Q ++ AP G A+ ++ +AAA++ G Y
Sbjct: 254 SAS--LGVGYRTQPMTAQAASYRAQPSVSLGAPYRGQLASPSSQSAAASSLGPY 305
>gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo
sapiens]
Length = 288
Score = 38.9 bits (89), Expect = 0.002
Identities = 38/108 (35%), Positives = 44/108 (40%), Gaps = 4/108 (3%)
Query: 56 PFGIPAHYVYPQAFVQPGVVIPHVQPTAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAY 115
P +PA V P A P + V P AA S + A +A+ AA A AA
Sbjct: 142 PAAVPAA-VRPPAAGPPAAALAAVYPAAADPSAASLCAASPLAAVPAAASPAAVAPAAVC 200
Query: 116 DQYPYAASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAAAAAAA 163
P AA P+AA A AAA A AAAA AAAA
Sbjct: 201 ---PGAAGPSAASLCAASQPAAVPAAASPAAAAPLAVNPAAAARAAAA 245
Score = 36.2 bits (82), Expect = 0.015
Identities = 38/118 (32%), Positives = 46/118 (38%), Gaps = 6/118 (5%)
Query: 51 ALIQRPFGIPAHYVYPQA---FVQPGVVIPHVQPTAAAA--STTPYIDYTGAAYAQYSAA 105
A+ RP PA P A P V P +AA+ + +P A A
Sbjct: 93 AVAWRPAAAPAAVRPPAAGPPAAAPAAVCPAAADPSAASLCAASPPAAVPAAVPAAVRPP 152
Query: 106 AAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAAAAAAA 163
AA AAA YP AA P+AA A AV + AA AA AA +AA
Sbjct: 153 AAGPPAAALAAVYPAAADPSAASLCAASPLA-AVPAAASPAAVAPAAVCPGAAGPSAA 209
Score = 32.7 bits (73), Expect = 0.17
Identities = 39/118 (33%), Positives = 47/118 (39%), Gaps = 20/118 (16%)
Query: 50 PALIQRPF-GIPAHY---VYPQAFVQPGVVIPHVQPTAAAASTTPYIDYTGAAYAQYSAA 105
PA ++ P G PA VYP A + P AA + AA +A
Sbjct: 146 PAAVRPPAAGPPAAALAAVYPAAADPSAASLCAASPLAAVPAAASPAAVAPAAVCPGAAG 205
Query: 106 AAAAAAAAAYDQ--YPYAASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAAAAA 161
+AA+ AA P AASPAAA + A P AA AAAA AAA
Sbjct: 206 PSAASLCAASQPAAVPAAASPAAAAPL--------------AVNPAAAARAAAAPAAA 249
Score = 29.3 bits (64), Expect = 1.9
Identities = 28/87 (32%), Positives = 33/87 (37%), Gaps = 5/87 (5%)
Query: 72 PGVVIPHVQPTAAAASTTPYIDYTGAAYAQYSAA---AAAAAAAAAYDQYPYAASPAAAG 128
P +P AA A G + A AA AA AAA+ P A +PAAA
Sbjct: 181 PLAAVPAAASPAAVAPAAVCPGAAGPSAASLCAASQPAAVPAAASPAAAAPLAVNPAAAA 240
Query: 129 YVTAGGYGYAVQQPITAAAPGTAAAAA 155
A VQ A +P T A A
Sbjct: 241 RAAAAPAAACVQS--VAESPATPLAIA 265
>gi|148746211 NK2 transcription factor related, locus 3 [Homo
sapiens]
Length = 364
Score = 38.5 bits (88), Expect = 0.003
Identities = 29/87 (33%), Positives = 36/87 (41%), Gaps = 1/87 (1%)
Query: 81 PTAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAVQ 140
P + AS Y + Y SAAAAAAAAAAA Y++S A GG G
Sbjct: 249 PYSVGASAYSYNSFPAYGYGN-SAAAAAAAAAAAAAAAAYSSSYGCAYPAGGGGGGGGTS 307
Query: 141 QPITAAAPGTAAAAAAAAAAAAAFGQY 167
TA P +AA + G +
Sbjct: 308 AATTAMQPACSAAGGGPFVNVSNLGGF 334
Score = 35.4 bits (80), Expect = 0.026
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Query: 111 AAAAYDQYPYAASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAAAAAAAFGQYQP 169
+A AY PY+ +A Y + YGY AAA AAAAAAAAA ++++G P
Sbjct: 242 SAQAYGA-PYSVGASAYSYNSFPAYGYGNS---AAAAAAAAAAAAAAAAYSSSYGCAYP 296
Score = 27.3 bits (59), Expect = 7.1
Identities = 23/76 (30%), Positives = 30/76 (39%), Gaps = 12/76 (15%)
Query: 102 YSAAAAAAAAAAAYDQYP---YAASPAAAGYVTA---------GGYGYAVQQPITAAAPG 149
Y A + A+A +Y+ +P Y S AAA A YG A G
Sbjct: 246 YGAPYSVGASAYSYNSFPAYGYGNSAAAAAAAAAAAAAAAAYSSSYGCAYPAGGGGGGGG 305
Query: 150 TAAAAAAAAAAAAAFG 165
T+AA A A +A G
Sbjct: 306 TSAATTAMQPACSAAG 321
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.128 0.378
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,989,254
Number of Sequences: 37866
Number of extensions: 326601
Number of successful extensions: 6891
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 218
Number of HSP's successfully gapped in prelim test: 174
Number of HSP's that attempted gapping in prelim test: 2946
Number of HSP's gapped (non-prelim): 2047
length of query: 178
length of database: 18,247,518
effective HSP length: 96
effective length of query: 82
effective length of database: 14,612,382
effective search space: 1198215324
effective search space used: 1198215324
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.