Guide to the Human Genome
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Name: WRAP53 Sequence: fasta or formatted (548aa) NCBI GI: 221136858
Description:

WD repeat domain 79 isoform 2

Referenced in:

WD Repeat Proteins

Other entries for this name:
alt mRNA [548aa] WD repeat domain 79 isoform 1
alt mRNA [548aa] WD repeat domain 79 isoform 3
alt mRNA [548aa] WD repeat domain 79 isoform 4
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9         38           2
 C cysteine            2.7         15           2
 D aspartate           6.2         34           2
 E glutamate           8.4         46           3
 F phenylalanine       3.6         20           2
 G glycine             9.7         53           2
 H histidine           2.4         13           1
 I isoleucine          2.6         14           2
 K lysine              2.0         11           2
 L leucine             9.9         54           2
 M methionine          1.3          7           1
 N asparagine          3.1         17           1
 P proline             9.1         50           4
 Q glutamine           3.8         21           1
 R arginine            4.4         24           1
 S serine             10.8         59           3
 T threonine           4.9         27           2
 V valine              3.6         20           1
 W tryptophan          2.0         11           2
 Y tyrosine            2.6         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   WD repeat domain 79 isoform 2 
WRAP53                1.000   WD repeat domain 79 isoform 4 
WRAP53                1.000   WD repeat domain 79 isoform 3 
WRAP53                1.000   WD repeat domain 79 isoform 1 
TAF5                  0.044   TBP-associated factor 5 
TAF5L                 0.035   PCAF associated factor 65 beta isoform a 
WDR51B                0.028   WD repeat domain 51B 
KATNB1                0.027   katanin p80 subunit B 1 
NLE1                  0.027   Notchless gene homolog isoform a 
WDR5B                 0.026   WD repeat domain 5B 
WSB1                  0.025   WD repeat and SOCS box-containing 1 isoform 1 
WDR38                 0.024   WD repeat domain 38 
COPB2                 0.024   coatomer protein complex, subunit beta 2 (beta prime)...
GNB1                  0.023   guanine nucleotide-binding protein, beta-1 subunit [...
PAFAH1B1              0.023   platelet-activating factor acetylhydrolase, isoform I...
WDR51A                0.022   WD repeat domain 51A isoform 2 
WDR51A                0.022   WD repeat domain 51A isoform 1 
GNB2                  0.022   guanine nucleotide-binding protein, beta-2 subunit [...
WDR5                  0.022   WD repeat domain 5 
WDR5                  0.022   WD repeat domain 5 
WDR69                 0.022   WD repeat domain 69 
WDSUB1                0.022   WD repeat, sterile alpha motif and U-box domain con...
WDSUB1                0.022   WD repeat, sterile alpha motif and U-box domain con...
WDSUB1                0.022   WD repeat, sterile alpha motif and U-box domain con...
WNK4                  0.021   WNK lysine deficient protein kinase 4 
STRN4                 0.021   zinedin isoform 2 
STRN4                 0.021   zinedin isoform 1 
BRWD1                 0.020   bromodomain and WD repeat domain containing 1 isofor...
BRWD1                 0.020   bromodomain and WD repeat domain containing 1 isofor...
NLE1                  0.020   Notchless gene homolog isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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