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Search of human proteins with 115299745
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|115299745 SCF apoptosis response protein 1 isoform a [Homo
sapiens]
(161 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|115299762 SCF apoptosis response protein 1 isoform a [Homo sa... 327 2e-90
gi|115299750 SCF apoptosis response protein 1 isoform a [Homo sa... 327 2e-90
gi|115299745 SCF apoptosis response protein 1 isoform a [Homo sa... 327 2e-90
gi|115299756 SCF apoptosis response protein 1 isoform b [Homo sa... 195 2e-50
gi|115299754 SCF apoptosis response protein 1 isoform b [Homo sa... 195 2e-50
gi|115299760 SCF apoptosis response protein 1 isoform b [Homo sa... 195 2e-50
gi|34304370 dystrobrevin binding protein 1 isoform c [Homo sapiens] 103 8e-23
gi|19549327 dystrobrevin binding protein 1 isoform a [Homo sapiens] 103 8e-23
gi|34304368 dystrobrevin binding protein 1 isoform b [Homo sapiens] 80 1e-15
gi|110815838 dysbindin (dystrobrevin binding protein 1) domain c... 42 3e-04
gi|110815842 dysbindin (dystrobrevin binding protein 1) domain c... 42 3e-04
gi|91208420 bassoon protein [Homo sapiens] 38 0.004
gi|20270337 Leo1, Paf1/RNA polymerase II complex component, homo... 37 0.007
gi|239757409 PREDICTED: similar to zinc finger protein 208 [Homo... 37 0.010
gi|239746371 PREDICTED: similar to zinc finger protein 208 [Homo... 37 0.010
gi|210032580 SET domain containing 1B [Homo sapiens] 36 0.013
gi|46519147 ankyrin repeat and KH domain containing 1 isoform 1 ... 36 0.016
gi|37620163 ANKHD1-EIF4EBP3 protein [Homo sapiens] 36 0.016
gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens] 35 0.036
gi|32189362 PTPRF interacting protein alpha 3 [Homo sapiens] 35 0.036
gi|163965366 nascent polypeptide-associated complex alpha subuni... 35 0.036
gi|5174573 myeloid/lymphoid or mixed-lineage leukemia trithorax ... 34 0.048
gi|16445033 ACRC protein [Homo sapiens] 34 0.048
gi|11342676 thyroid hormone receptor interactor 10 [Homo sapiens] 34 0.048
gi|53832007 calcium channel, voltage-dependent, L type, alpha 1F... 34 0.062
gi|32140760 collagen, type XXVII, alpha 1 [Homo sapiens] 33 0.081
gi|83367077 mucin 16 [Homo sapiens] 33 0.11
gi|55741677 SET domain containing 1A [Homo sapiens] 33 0.11
gi|7662238 apoptotic chromatin condensation inducer 1 [Homo sapi... 33 0.14
gi|206597445 alpha 1 type XVIII collagen isoform 3 precursor [Ho... 33 0.14
>gi|115299762 SCF apoptosis response protein 1 isoform a [Homo
sapiens]
Length = 161
Score = 327 bits (839), Expect = 2e-90
Identities = 161/161 (100%), Positives = 161/161 (100%)
Query: 1 MDPNPRAALERQQLRLRERQKFFEDILQPETEFVFPLSHLHLESQRPPIGSISSMEVNVD 60
MDPNPRAALERQQLRLRERQKFFEDILQPETEFVFPLSHLHLESQRPPIGSISSMEVNVD
Sbjct: 1 MDPNPRAALERQQLRLRERQKFFEDILQPETEFVFPLSHLHLESQRPPIGSISSMEVNVD 60
Query: 61 TLEQVELIDLGDPDAADVFLPCEDPPPTPQSSGMDNHLEELSLPVPTSDRTTSRTSSSSS 120
TLEQVELIDLGDPDAADVFLPCEDPPPTPQSSGMDNHLEELSLPVPTSDRTTSRTSSSSS
Sbjct: 61 TLEQVELIDLGDPDAADVFLPCEDPPPTPQSSGMDNHLEELSLPVPTSDRTTSRTSSSSS 120
Query: 121 SDSSTNLHSPNPSDDGADTPLAQSDEEEERGDGGAEPGACS 161
SDSSTNLHSPNPSDDGADTPLAQSDEEEERGDGGAEPGACS
Sbjct: 121 SDSSTNLHSPNPSDDGADTPLAQSDEEEERGDGGAEPGACS 161
>gi|115299750 SCF apoptosis response protein 1 isoform a [Homo
sapiens]
Length = 161
Score = 327 bits (839), Expect = 2e-90
Identities = 161/161 (100%), Positives = 161/161 (100%)
Query: 1 MDPNPRAALERQQLRLRERQKFFEDILQPETEFVFPLSHLHLESQRPPIGSISSMEVNVD 60
MDPNPRAALERQQLRLRERQKFFEDILQPETEFVFPLSHLHLESQRPPIGSISSMEVNVD
Sbjct: 1 MDPNPRAALERQQLRLRERQKFFEDILQPETEFVFPLSHLHLESQRPPIGSISSMEVNVD 60
Query: 61 TLEQVELIDLGDPDAADVFLPCEDPPPTPQSSGMDNHLEELSLPVPTSDRTTSRTSSSSS 120
TLEQVELIDLGDPDAADVFLPCEDPPPTPQSSGMDNHLEELSLPVPTSDRTTSRTSSSSS
Sbjct: 61 TLEQVELIDLGDPDAADVFLPCEDPPPTPQSSGMDNHLEELSLPVPTSDRTTSRTSSSSS 120
Query: 121 SDSSTNLHSPNPSDDGADTPLAQSDEEEERGDGGAEPGACS 161
SDSSTNLHSPNPSDDGADTPLAQSDEEEERGDGGAEPGACS
Sbjct: 121 SDSSTNLHSPNPSDDGADTPLAQSDEEEERGDGGAEPGACS 161
>gi|115299745 SCF apoptosis response protein 1 isoform a [Homo
sapiens]
Length = 161
Score = 327 bits (839), Expect = 2e-90
Identities = 161/161 (100%), Positives = 161/161 (100%)
Query: 1 MDPNPRAALERQQLRLRERQKFFEDILQPETEFVFPLSHLHLESQRPPIGSISSMEVNVD 60
MDPNPRAALERQQLRLRERQKFFEDILQPETEFVFPLSHLHLESQRPPIGSISSMEVNVD
Sbjct: 1 MDPNPRAALERQQLRLRERQKFFEDILQPETEFVFPLSHLHLESQRPPIGSISSMEVNVD 60
Query: 61 TLEQVELIDLGDPDAADVFLPCEDPPPTPQSSGMDNHLEELSLPVPTSDRTTSRTSSSSS 120
TLEQVELIDLGDPDAADVFLPCEDPPPTPQSSGMDNHLEELSLPVPTSDRTTSRTSSSSS
Sbjct: 61 TLEQVELIDLGDPDAADVFLPCEDPPPTPQSSGMDNHLEELSLPVPTSDRTTSRTSSSSS 120
Query: 121 SDSSTNLHSPNPSDDGADTPLAQSDEEEERGDGGAEPGACS 161
SDSSTNLHSPNPSDDGADTPLAQSDEEEERGDGGAEPGACS
Sbjct: 121 SDSSTNLHSPNPSDDGADTPLAQSDEEEERGDGGAEPGACS 161
>gi|115299756 SCF apoptosis response protein 1 isoform b [Homo
sapiens]
Length = 112
Score = 195 bits (495), Expect = 2e-50
Identities = 97/109 (88%), Positives = 98/109 (89%)
Query: 1 MDPNPRAALERQQLRLRERQKFFEDILQPETEFVFPLSHLHLESQRPPIGSISSMEVNVD 60
MDPNPRAALERQQLRLRERQKFFEDILQPETEFVFPLSHLHLESQRPPIGSISSMEVNVD
Sbjct: 1 MDPNPRAALERQQLRLRERQKFFEDILQPETEFVFPLSHLHLESQRPPIGSISSMEVNVD 60
Query: 61 TLEQVELIDLGDPDAADVFLPCEDPPPTPQSSGMDNHLEELSLPVPTSD 109
TLEQVELIDLGDPDAADVFLPCEDPPPTPQSSGM + S P D
Sbjct: 61 TLEQVELIDLGDPDAADVFLPCEDPPPTPQSSGMPLCFGDFSASQPEPD 109
>gi|115299754 SCF apoptosis response protein 1 isoform b [Homo
sapiens]
Length = 112
Score = 195 bits (495), Expect = 2e-50
Identities = 97/109 (88%), Positives = 98/109 (89%)
Query: 1 MDPNPRAALERQQLRLRERQKFFEDILQPETEFVFPLSHLHLESQRPPIGSISSMEVNVD 60
MDPNPRAALERQQLRLRERQKFFEDILQPETEFVFPLSHLHLESQRPPIGSISSMEVNVD
Sbjct: 1 MDPNPRAALERQQLRLRERQKFFEDILQPETEFVFPLSHLHLESQRPPIGSISSMEVNVD 60
Query: 61 TLEQVELIDLGDPDAADVFLPCEDPPPTPQSSGMDNHLEELSLPVPTSD 109
TLEQVELIDLGDPDAADVFLPCEDPPPTPQSSGM + S P D
Sbjct: 61 TLEQVELIDLGDPDAADVFLPCEDPPPTPQSSGMPLCFGDFSASQPEPD 109
>gi|115299760 SCF apoptosis response protein 1 isoform b [Homo
sapiens]
Length = 112
Score = 195 bits (495), Expect = 2e-50
Identities = 97/109 (88%), Positives = 98/109 (89%)
Query: 1 MDPNPRAALERQQLRLRERQKFFEDILQPETEFVFPLSHLHLESQRPPIGSISSMEVNVD 60
MDPNPRAALERQQLRLRERQKFFEDILQPETEFVFPLSHLHLESQRPPIGSISSMEVNVD
Sbjct: 1 MDPNPRAALERQQLRLRERQKFFEDILQPETEFVFPLSHLHLESQRPPIGSISSMEVNVD 60
Query: 61 TLEQVELIDLGDPDAADVFLPCEDPPPTPQSSGMDNHLEELSLPVPTSD 109
TLEQVELIDLGDPDAADVFLPCEDPPPTPQSSGM + S P D
Sbjct: 61 TLEQVELIDLGDPDAADVFLPCEDPPPTPQSSGMPLCFGDFSASQPEPD 109
>gi|34304370 dystrobrevin binding protein 1 isoform c [Homo sapiens]
Length = 270
Score = 103 bits (256), Expect = 8e-23
Identities = 61/148 (41%), Positives = 88/148 (59%), Gaps = 13/148 (8%)
Query: 12 QQLRLRERQKFFEDILQPETEFVFPLSHLHLESQRPPIGSISSMEVNVDTLEQVELIDLG 71
QQ++L+ERQKFFE+ Q + E +L + +R PIGS+SSMEVNVD LEQ++L+D+
Sbjct: 107 QQMKLKERQKFFEEAFQQDMEQYLSTGYLQIAERREPIGSMSSMEVNVDMLEQMDLMDIS 166
Query: 72 DPDAADVFL-------PCEDPPPTPQSSGMDNHLEELSLPVPTSDRTTSRTSSSSSSDSS 124
D +A DVFL P P+SS N + L +P P+ R +SSS+ +DS+
Sbjct: 167 DQEALDVFLNSGGEENTVLSPALGPESSTCQNEI-TLQVPNPSELRAKPPSSSSTCTDSA 225
Query: 125 TNLHSPNPSDDGADTPLAQSDEEEERGD 152
T +G ++P+ QSDEEE + D
Sbjct: 226 T-----RDISEGGESPVVQSDEEEVQVD 248
>gi|19549327 dystrobrevin binding protein 1 isoform a [Homo sapiens]
Length = 351
Score = 103 bits (256), Expect = 8e-23
Identities = 61/148 (41%), Positives = 88/148 (59%), Gaps = 13/148 (8%)
Query: 12 QQLRLRERQKFFEDILQPETEFVFPLSHLHLESQRPPIGSISSMEVNVDTLEQVELIDLG 71
QQ++L+ERQKFFE+ Q + E +L + +R PIGS+SSMEVNVD LEQ++L+D+
Sbjct: 188 QQMKLKERQKFFEEAFQQDMEQYLSTGYLQIAERREPIGSMSSMEVNVDMLEQMDLMDIS 247
Query: 72 DPDAADVFL-------PCEDPPPTPQSSGMDNHLEELSLPVPTSDRTTSRTSSSSSSDSS 124
D +A DVFL P P+SS N + L +P P+ R +SSS+ +DS+
Sbjct: 248 DQEALDVFLNSGGEENTVLSPALGPESSTCQNEI-TLQVPNPSELRAKPPSSSSTCTDSA 306
Query: 125 TNLHSPNPSDDGADTPLAQSDEEEERGD 152
T +G ++P+ QSDEEE + D
Sbjct: 307 T-----RDISEGGESPVVQSDEEEVQVD 329
>gi|34304368 dystrobrevin binding protein 1 isoform b [Homo sapiens]
Length = 303
Score = 79.7 bits (195), Expect = 1e-15
Identities = 44/102 (43%), Positives = 63/102 (61%), Gaps = 1/102 (0%)
Query: 12 QQLRLRERQKFFEDILQPETEFVFPLSHLHLESQRPPIGSISSMEVNVDTLEQVELIDLG 71
QQ++L+ERQKFFE+ Q + E +L + +R PIGS+SSMEVNVD LEQ++L+D+
Sbjct: 188 QQMKLKERQKFFEEAFQQDMEQYLSTGYLQIAERREPIGSMSSMEVNVDMLEQMDLMDIS 247
Query: 72 DPDAADVFLPCEDPPPTPQSSGMDNHLEELSLPVPTSDRTTS 113
D +A DVFL T S + +++L+L P R S
Sbjct: 248 DQEALDVFLNSGGEENTVLSPAL-GRVDKLALAEPGQYRCHS 288
>gi|110815838 dysbindin (dystrobrevin binding protein 1) domain
containing 1 isoform 1 [Homo sapiens]
Length = 158
Score = 41.6 bits (96), Expect = 3e-04
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 40 LHLESQRPPIGSISSMEVNVDTLEQVELIDLGDPDAADVFLPCED 84
L + +R P+ S+SS+EV+ D L+ EL D+ D + A+VF +D
Sbjct: 53 LQVTERRQPLSSVSSLEVHFDLLDLTELTDMSDQELAEVFADSDD 97
>gi|110815842 dysbindin (dystrobrevin binding protein 1) domain
containing 1 isoform 2 [Homo sapiens]
Length = 178
Score = 41.6 bits (96), Expect = 3e-04
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 40 LHLESQRPPIGSISSMEVNVDTLEQVELIDLGDPDAADVFLPCED 84
L + +R P+ S+SS+EV+ D L+ EL D+ D + A+VF +D
Sbjct: 73 LQVTERRQPLSSVSSLEVHFDLLDLTELTDMSDQELAEVFADSDD 117
>gi|91208420 bassoon protein [Homo sapiens]
Length = 3926
Score = 37.7 bits (86), Expect = 0.004
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 116 SSSSSSDSSTNLHSP--NPSDDGADTPLAQSDEEEERGDGGAEPGA 159
+++ S S LHSP +P+ A PL + D+E RG GG +PG+
Sbjct: 231 TTAPRSKSQQQLHSPALSPAHSPAKQPLGKPDQERSRGPGGPQPGS 276
>gi|20270337 Leo1, Paf1/RNA polymerase II complex component, homolog
[Homo sapiens]
Length = 666
Score = 37.0 bits (84), Expect = 0.007
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 15/95 (15%)
Query: 63 EQVELIDLGDPDAADVFLPCEDPPPTPQSSGMDNHLEELSLPVPTSDRTTSRTSSSSSSD 122
+Q E D G P ++F + SG DNH S+R+ +R+ +S SD
Sbjct: 46 DQDERGDSGQPSNKELFGDDSEDEGASHHSGSDNH----------SERSDNRSEASERSD 95
Query: 123 SSTNLHSPNPSDDGADTPLAQSDEEEE--RGDGGA 155
N S G++ P +D+E+E R DGG+
Sbjct: 96 HEDNDPSDVDQHSGSEAP---NDDEDEGHRSDGGS 127
>gi|239757409 PREDICTED: similar to zinc finger protein 208 [Homo
sapiens]
Length = 1059
Score = 36.6 bits (83), Expect = 0.010
Identities = 26/80 (32%), Positives = 31/80 (38%), Gaps = 6/80 (7%)
Query: 81 PCEDPPPTPQSSGMDNHLEELSLPVPTSDRTTSRTSSSSSSDSSTNLHSPNPSDDGADTP 140
P PP P HL L LP P + T+ S+ SS +P PS DG+ P
Sbjct: 279 PAAGGPPQPGP-----HLPPLGLPAPAASAATAAAPSTVSSGPPATPVAPAPSADGSAAP 333
Query: 141 LAQSDEEEERGDGGAEPGAC 160
G GG P AC
Sbjct: 334 AGVGVPPPATG-GGDGPFAC 352
Score = 32.3 bits (72), Expect = 0.18
Identities = 31/93 (33%), Positives = 42/93 (45%), Gaps = 11/93 (11%)
Query: 57 VNVDTLEQVELIDLGDPDAADVFLPCE-----DPPPTPQSSGMDNHLEELSLP---VPTS 108
+N E +EL G+ A LPC PPP P D + P VP+S
Sbjct: 37 LNHQRFEPMELY--GEHAKAVAALPCAPGPPPQPPPQPPPPQYDYPPQSTFKPKAEVPSS 94
Query: 109 DRTTSRTSSSSSSDSSTNLHSPNPSDDGADTPL 141
++S +SSSSSS SS++ S + D PL
Sbjct: 95 SSSSS-SSSSSSSSSSSSSSSSSSQAKKPDPPL 126
>gi|239746371 PREDICTED: similar to zinc finger protein 208 [Homo
sapiens]
Length = 1059
Score = 36.6 bits (83), Expect = 0.010
Identities = 26/80 (32%), Positives = 31/80 (38%), Gaps = 6/80 (7%)
Query: 81 PCEDPPPTPQSSGMDNHLEELSLPVPTSDRTTSRTSSSSSSDSSTNLHSPNPSDDGADTP 140
P PP P HL L LP P + T+ S+ SS +P PS DG+ P
Sbjct: 279 PAAGGPPQPGP-----HLPPLGLPAPAASAATAAAPSTVSSGPPATPVAPAPSADGSAAP 333
Query: 141 LAQSDEEEERGDGGAEPGAC 160
G GG P AC
Sbjct: 334 AGVGVPPPATG-GGDGPFAC 352
Score = 32.3 bits (72), Expect = 0.18
Identities = 31/93 (33%), Positives = 42/93 (45%), Gaps = 11/93 (11%)
Query: 57 VNVDTLEQVELIDLGDPDAADVFLPCE-----DPPPTPQSSGMDNHLEELSLP---VPTS 108
+N E +EL G+ A LPC PPP P D + P VP+S
Sbjct: 37 LNHQRFEPMELY--GEHAKAVAALPCAPGPPPQPPPQPPPPQYDYPPQSTFKPKAEVPSS 94
Query: 109 DRTTSRTSSSSSSDSSTNLHSPNPSDDGADTPL 141
++S +SSSSSS SS++ S + D PL
Sbjct: 95 SSSSS-SSSSSSSSSSSSSSSSSSQAKKPDPPL 126
>gi|210032580 SET domain containing 1B [Homo sapiens]
Length = 1923
Score = 36.2 bits (82), Expect = 0.013
Identities = 32/114 (28%), Positives = 49/114 (42%), Gaps = 6/114 (5%)
Query: 54 SMEVNVDTLEQVELIDLGDPDAADVFLPCEDPPPTPQSS------GMDNHLEELSLPVPT 107
S E + E+ E D D D+ D D T S G + E +S+
Sbjct: 1047 STEEEEEAEEEEEEEDDDDDDSDDRDESENDDEDTALSEASEKDEGDSDEEETVSIVTSK 1106
Query: 108 SDRTTSRTSSSSSSDSSTNLHSPNPSDDGADTPLAQSDEEEERGDGGAEPGACS 161
++ T+S SS SS S++ SP+ S+D + + +EEEE + AE S
Sbjct: 1107 AEATSSSESSESSEFESSSESSPSSSEDEEEVVAREEEEEEEEEEMVAEESMAS 1160
Score = 29.3 bits (64), Expect = 1.5
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 13/88 (14%)
Query: 63 EQVELIDLGDPDAADVFLPCEDPPPTPQSSGMDNHLEELSLPVPTSDRTTSR-TSSSSSS 121
++ +L+ L +PD+ D L E P + SS L L+ P T+ + R + SS
Sbjct: 510 QRTKLLFLREPDS-DTELQMEGSPISSSSS----QLSPLA-PFGTNSQPGFRGPTPPSSR 563
Query: 122 DSSTNLHSPNPSDDGADTPLAQSDEEEE 149
SST L +P TPL SDE+EE
Sbjct: 564 PSSTGLEDISP------TPLPDSDEDEE 585
>gi|46519147 ankyrin repeat and KH domain containing 1 isoform 1 [Homo
sapiens]
Length = 2542
Score = 35.8 bits (81), Expect = 0.016
Identities = 29/114 (25%), Positives = 44/114 (38%), Gaps = 16/114 (14%)
Query: 47 PPIGSISSMEVNVDTLEQVELIDLGDPDAADVFLPCEDPPPTPQSSGMDNHLEELSLPVP 106
PP ISS+ +L V + A FLP T Q+ +E S P
Sbjct: 1971 PPATVISSVTSTCSSLPSVSSAPITSGQAPTTFLPAS----TSQAQLSSQKMESFSAVPP 2026
Query: 107 TSDR------------TTSRTSSSSSSDSSTNLHSPNPSDDGADTPLAQSDEEE 148
T ++ T S T++S SS +S +P + TP + + +EE
Sbjct: 2027 TKEKVSTQDQPMANLCTPSSTANSCSSSASNTPGAPETHPSSSPTPTSSNTQEE 2080
>gi|37620163 ANKHD1-EIF4EBP3 protein [Homo sapiens]
Length = 2617
Score = 35.8 bits (81), Expect = 0.016
Identities = 29/114 (25%), Positives = 44/114 (38%), Gaps = 16/114 (14%)
Query: 47 PPIGSISSMEVNVDTLEQVELIDLGDPDAADVFLPCEDPPPTPQSSGMDNHLEELSLPVP 106
PP ISS+ +L V + A FLP T Q+ +E S P
Sbjct: 1971 PPATVISSVTSTCSSLPSVSSAPITSGQAPTTFLPAS----TSQAQLSSQKMESFSAVPP 2026
Query: 107 TSDR------------TTSRTSSSSSSDSSTNLHSPNPSDDGADTPLAQSDEEE 148
T ++ T S T++S SS +S +P + TP + + +EE
Sbjct: 2027 TKEKVSTQDQPMANLCTPSSTANSCSSSASNTPGAPETHPSSSPTPTSSNTQEE 2080
>gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens]
Length = 1682
Score = 34.7 bits (78), Expect = 0.036
Identities = 24/92 (26%), Positives = 38/92 (41%), Gaps = 6/92 (6%)
Query: 71 GDPDAADVFLPCEDPPPT--PQSSGMDNHLEELSLPVPTSDRTTSRTSSSSSSDSSTNLH 128
G+ P + PPP P + LEE+S T R S++D + +
Sbjct: 885 GEEPVPGPMTPTQPPPPLSLPPARSESEVLEEISRACETLVERVGR----SATDPADPVD 940
Query: 129 SPNPSDDGADTPLAQSDEEEERGDGGAEPGAC 160
+ P+D G + L + +EE G A G+C
Sbjct: 941 TAEPADSGTERLLPPAQAKEEAGGVAAVSGSC 972
Score = 28.1 bits (61), Expect = 3.4
Identities = 14/28 (50%), Positives = 18/28 (64%)
Query: 111 TTSRTSSSSSSDSSTNLHSPNPSDDGAD 138
TT+ +SSSSSS++ PNP GAD
Sbjct: 396 TTTSSSSSSSSNTGLRGVEPNPGIPGAD 423
>gi|32189362 PTPRF interacting protein alpha 3 [Homo sapiens]
Length = 1194
Score = 34.7 bits (78), Expect = 0.036
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Query: 91 SSGMDN---HLEELSLPVPTSDRTTSRTSSSSSSDSSTNLHSPNPSDDGADTPLAQSDEE 147
SSG+D+ + SLP + T + S SS S+ L P+P+ +G D EE
Sbjct: 640 SSGLDSLGRYRSSCSLPPSLTTSTLASPSPPSSGHSTPRLAPPSPAREGTDKANHVPKEE 699
Query: 148 --EERGDGGAEPG 158
RG+G A PG
Sbjct: 700 AGAPRGEGPAIPG 712
Score = 30.0 bits (66), Expect = 0.90
Identities = 18/77 (23%), Positives = 31/77 (40%)
Query: 47 PPIGSISSMEVNVDTLEQVELIDLGDPDAADVFLPCEDPPPTPQSSGMDNHLEELSLPVP 106
P + S D V + G P +P + PPPTP+S+ ++ + L+L
Sbjct: 677 PRLAPPSPAREGTDKANHVPKEEAGAPRGEGPAIPGDTPPPTPRSARLERMTQALALQAG 736
Query: 107 TSDRTTSRTSSSSSSDS 123
+ + S + DS
Sbjct: 737 SLEDGGPPRGSEGTPDS 753
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 34.7 bits (78), Expect = 0.036
Identities = 28/80 (35%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Query: 67 LIDLGDPDAADVFLPCEDPPPTPQSSGMDNHLEELSLPVPTSDRTTSRTSSSS---SSDS 123
L D P V + PP S+G D + LS PV + + +S S S DS
Sbjct: 790 LADSPSPLGVSVSPQTKRPPTKKGSAGPDTPIGNLSSPVSPVEASFLPENSLSFQGSKDS 849
Query: 124 STNLHSPN-PSDDGADTPLA 142
HSP PS GA TP A
Sbjct: 850 PATTHSPTPPSPKGAPTPSA 869
Score = 26.6 bits (57), Expect = 9.9
Identities = 26/134 (19%), Positives = 54/134 (40%), Gaps = 20/134 (14%)
Query: 27 LQPETEFVFPLSHLHLESQRPPIGSISSMEVNVDTLEQVELIDLGDPDAADVFLPCEDP- 85
L P+ +F+ L LES P+ ++ EL+ L P+ +P +
Sbjct: 1810 LPPKQQFLPSSPGLVLESPSKPLAPA----------DEDELLPLIPPEPISGGVPFQSVL 1859
Query: 86 --PPTPQSSGMDNHLEELSLPVPTSDRTTSRTSSSSSSDSSTNLHSPNPSDDGADTPLAQ 143
PTP+S+G + +P P++ + ++ + S ++S ++ P + + Q
Sbjct: 1860 VNMPTPKSAG-------IPVPTPSAKQPVTKNNKGSGTESDSDESVPELEEQDSTQATTQ 1912
Query: 144 SDEEEERGDGGAEP 157
+ + EP
Sbjct: 1913 QAQLAAAAEIDEEP 1926
>gi|5174573 myeloid/lymphoid or mixed-lineage leukemia trithorax
homolog 2 [Homo sapiens]
Length = 1210
Score = 34.3 bits (77), Expect = 0.048
Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 16/113 (14%)
Query: 38 SHLHLESQRPPIGSISSMEVNVDTLEQVELIDLGDPDAADVFLPCEDPPPTPQSSGMDNH 97
S H SQ+ G+ S +E + ++L D D D+ + P P SS +
Sbjct: 409 SKTHSNSQQ---GTSSMLE------DDLQLSDSEDSDSE------QTPEKPPSSSAPPSA 453
Query: 98 LEELSLPVPTSDRTTSRTSSSSSSDSSTNLHSPNPSDDGADT-PLAQSDEEEE 149
+ L PV ++ +++ + S+S SDSS++ S + S D + PL E E
Sbjct: 454 PQSLPEPVASAHSSSAESESTSDSDSSSDSESESSSSDSEENEPLETPAPEPE 506
Score = 27.3 bits (59), Expect = 5.8
Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 6/58 (10%)
Query: 83 EDPPPTPQSSGMDNHLEELSLPV--PTSDRTTS----RTSSSSSSDSSTNLHSPNPSD 134
E PPT +DN L ++S P P R+T S SSDS+T+ D
Sbjct: 504 EPEPPTTNKWQLDNWLTKVSQPAAPPEGPRSTEPPRRHPESKGSSDSATSQEHSESKD 561
>gi|16445033 ACRC protein [Homo sapiens]
Length = 691
Score = 34.3 bits (77), Expect = 0.048
Identities = 32/134 (23%), Positives = 54/134 (40%), Gaps = 13/134 (9%)
Query: 39 HLHLESQRPPI---------GSISSMEVNVDTLEQVELID--LGDPDAADVFLPCEDPPP 87
H+ Q PPI + + +EV D + E D D +A D + P
Sbjct: 111 HVKPAIQEPPIVISDDDNDDDNGNDLEVPDDNSDDSEAPDDNSDDSEAPDDNSDDSEAPD 170
Query: 88 --TPQSSGMDNHLEELSLPVPTSDRTTSRTSSSSSSDSSTNLHSPNPSDDGADTPLAQSD 145
+ S D++ ++ +P SD ++ S SS D+S + P+ D +D P SD
Sbjct: 171 DNSDDSEAPDDNSDDSDVPDDNSDDSSDDNSDDSSDDNSDDSDVPDDKSDDSDVPDDSSD 230
Query: 146 EEEERGDGGAEPGA 159
+ + D + A
Sbjct: 231 DSDVPDDSSDDSEA 244
Score = 31.2 bits (69), Expect = 0.40
Identities = 24/95 (25%), Positives = 43/95 (45%), Gaps = 7/95 (7%)
Query: 69 DLGDPDAADVFLPCEDPPPTPQSSGMDNHLEELSLPVPTSDRTTSRTSSSSSS----DSS 124
D D ++ D +P + + S D+ ++ +P +SD + + SS S DSS
Sbjct: 203 DSSDDNSDDSDVPDDK---SDDSDVPDDSSDDSDVPDDSSDDSEAPDDSSDDSEAPDDSS 259
Query: 125 TNLHSPNPSDDGADTPLAQSDEEEERGDGGAEPGA 159
+ +P+ S D ++ P SD+ E D + A
Sbjct: 260 DDSEAPDDSSDDSEAPDDSSDDSEASDDSSDDSEA 294
Score = 30.0 bits (66), Expect = 0.90
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Query: 91 SSGMDNHLEELSLPVPTSDRTTSRTSSS----SSSDSSTNLHSPNPSDDGADTPLAQSDE 146
S D+ ++ P +SD + + SS +S DSS + +P+ D +D P +SD+
Sbjct: 262 SEAPDDSSDDSEAPDDSSDDSEASDDSSDDSEASDDSSDDSEAPDDKSDDSDVPEDKSDD 321
Query: 147 EEERGD 152
+ D
Sbjct: 322 SDVPDD 327
>gi|11342676 thyroid hormone receptor interactor 10 [Homo sapiens]
Length = 545
Score = 34.3 bits (77), Expect = 0.048
Identities = 33/153 (21%), Positives = 66/153 (43%), Gaps = 6/153 (3%)
Query: 10 ERQQLRLRERQKFFEDILQPETEFVFPLSHLH-LESQRPPIGSISSMEVNV-DTLEQVEL 67
E+Q+ RL+++ + LQ E + L + + + P +G +S+E + +TL +E
Sbjct: 341 EQQRKRLQQQLEERSRELQKEVDQREALKKMKDVYEKTPQMGDPASLEPQIAETLSNIER 400
Query: 68 IDLGDPDAADVFLPCEDPPPTPQSSGMDNHLEELSLPVPTSDRTTSRTSSSSSSDSSTNL 127
+ L E + + + H P P + +S+S+S D+ +
Sbjct: 401 LKLEVQKYEAWLAEAESRVLSNRGDSLSRHARP---PDPPASAPPDSSSNSASQDTKESS 457
Query: 128 HSPNPSDDGADTPLAQSDEEEERGDGGAEPGAC 160
P PS++ DTP+ +E+ + + G C
Sbjct: 458 EEP-PSEESQDTPIYTEFDEDFEEEPTSPIGHC 489
>gi|53832007 calcium channel, voltage-dependent, L type, alpha 1F
subunit [Homo sapiens]
Length = 1977
Score = 33.9 bits (76), Expect = 0.062
Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 13/96 (13%)
Query: 59 VDTLEQVELIDLGDPDAADVFLPCEDPPPTPQSSGMDNHLEELSLPVPTSDRTTSRT--- 115
+D + Q E +D+ DP A +D + G H +L+ ++R R
Sbjct: 405 LDWITQAEELDMEDPSA-------DDNLGSMAEEGRAGHRPQLA---ELTNRRRGRLRWF 454
Query: 116 SSSSSSDSSTNLHSPNPSDDGADTPLAQSDEEEERG 151
S S+ S ST+ H+ P+ D Q DE+EE G
Sbjct: 455 SHSTRSTHSTSSHASLPASDTGSMTETQGDEDEEEG 490
>gi|32140760 collagen, type XXVII, alpha 1 [Homo sapiens]
Length = 1860
Score = 33.5 bits (75), Expect = 0.081
Identities = 38/153 (24%), Positives = 56/153 (36%), Gaps = 20/153 (13%)
Query: 3 PNPRAALERQQLRLRERQKFFEDILQPETEFVFPLSHLHLESQRPPIGSISSMEVNVDTL 62
P P AA Q++ + K + + P+ H + P S + T
Sbjct: 348 PRPAAAQPSQKITATKIPKSLPTKPSAPSTSIVPIKSPHPTQKTAPSSFTKSA---LPTQ 404
Query: 63 EQVELIDLGDPDAADVFLPCEDP---------PPTPQSSGMDNHLEELSLPVPTSDRTTS 113
+QV P A V P E P PP P + + P+PT RT +
Sbjct: 405 KQVP--PTSRPVPARVSRPAEKPIQRNPGMPRPPPPSTRPLPPTTSSSKKPIPTLARTEA 462
Query: 114 RTSSSSSSDSS--TNLHSPNP----SDDGADTP 140
+ +S +S +S T+ H P P S A TP
Sbjct: 463 KITSHASKPASARTSTHKPPPFTALSSSPAPTP 495
>gi|83367077 mucin 16 [Homo sapiens]
Length = 14507
Score = 33.1 bits (74), Expect = 0.11
Identities = 29/131 (22%), Positives = 50/131 (38%), Gaps = 8/131 (6%)
Query: 27 LQPETEFVFPLSHLHLESQRPP-IGSISSMEVNVDTLEQVELIDLGDPDAADVFLPCEDP 85
LQ + P S L++ + PP + S ++ T + + + + LP P
Sbjct: 3071 LQTSALTLSPTSTLNMSQEEPPELTSSQTIAEEEGTTAETQTLTFTPSETPTSLLPVSSP 3130
Query: 86 --PPTPQSSGMDNHLEELSLP-----VPTSDRTTSRTSSSSSSDSSTNLHSPNPSDDGAD 138
P + S + +S+P V T+D T T SS + N P P+++
Sbjct: 3131 TEPTARRKSSPETWASSISVPAKTSLVETTDGTLVTTIKMSSQAAQGNSTWPAPAEETGS 3190
Query: 139 TPLAQSDEEEE 149
+P S E
Sbjct: 3191 SPAGTSPGSPE 3201
Score = 26.6 bits (57), Expect = 9.9
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Query: 98 LEELSLP------VPTSDRTTSRTSSSSSSDSSTNLHSPNPSDDGADTPLA 142
L+ +S P + TS T S +S+ +++ST+ + +PSD A TP++
Sbjct: 3625 LDSMSTPHGRITVIGTSLVTPSSDASAVKTETSTSERTLSPSDTTASTPIS 3675
>gi|55741677 SET domain containing 1A [Homo sapiens]
Length = 1707
Score = 33.1 bits (74), Expect = 0.11
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 108 SDRTTSRTSSSSSSDSSTNLHSPNPSDDGADTPLAQSDEEEE 149
+D T+ SSSSSS SS++ S + S + + + DEEEE
Sbjct: 1027 NDSTSDSESSSSSSSSSSSSSSSSSSSSSSSSESSSEDEEEE 1068
Score = 32.0 bits (71), Expect = 0.24
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 111 TTSRTSSSSSSDSSTNLHSPNPSDDGADTPLAQSDEEEERGDGGAEPGA 159
+TS + SSSSS SS++ S + S + + + S++EEE A P A
Sbjct: 1029 STSDSESSSSSSSSSSSSSSSSSSSSSSSSESSSEDEEEEERPAALPSA 1077
Score = 28.5 bits (62), Expect = 2.6
Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Query: 107 TSDRTTSRTSSSSSSDSSTNLHSPNPSDDGADTPLAQSDEEEER 150
TSD +S +SSSSSS SS++ S + S + ++ +EEEER
Sbjct: 1030 TSDSESS-SSSSSSSSSSSS--SSSSSSSSSSESSSEDEEEEER 1070
Score = 27.3 bits (59), Expect = 5.8
Identities = 22/93 (23%), Positives = 38/93 (40%)
Query: 56 EVNVDTLEQVELIDLGDPDAADVFLPCEDPPPTPQSSGMDNHLEELSLPVPTSDRTTSRT 115
E VDT ++ + G+ + +D C + + + E S +S ++S +
Sbjct: 991 EEAVDTTKKETEVSDGEDEESDSSSKCSLYADSDGENDSTSDSESSSSSSSSSSSSSSSS 1050
Query: 116 SSSSSSDSSTNLHSPNPSDDGADTPLAQSDEEE 148
SSSSSS S ++ + A P A E
Sbjct: 1051 SSSSSSSSESSSEDEEEEERPAALPSASPPPRE 1083
Score = 26.6 bits (57), Expect = 9.9
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Query: 88 TPQSSGMDNHLE---ELSLPVPTSDRTTSRTSSSSSSDSSTNLHSPNPSDDGADTPLAQS 144
T S G D + + SL + S + S SSS SS++ S + S + + ++S
Sbjct: 1001 TEVSDGEDEESDSSSKCSLYADSDGENDSTSDSESSSSSSSSSSSSSSSSSSSSSSSSES 1060
Query: 145 DEEEE 149
E+E
Sbjct: 1061 SSEDE 1065
>gi|7662238 apoptotic chromatin condensation inducer 1 [Homo
sapiens]
Length = 1341
Score = 32.7 bits (73), Expect = 0.14
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 107 TSDRTTSRTSSSSSSDSSTNLHSPNPSDDGADTPLAQSDEEEERGDGGAEP 157
++D ++SR+SSSSSS S + SP+ S + +PL + + A P
Sbjct: 573 SADSSSSRSSSSSSSSSRSRSRSPDSSGSRSHSPLRSKQRDVAQARTHANP 623
>gi|206597445 alpha 1 type XVIII collagen isoform 3 precursor [Homo
sapiens]
Length = 1751
Score = 32.7 bits (73), Expect = 0.14
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
Query: 103 LPV-PTSDRTTSRTSSSSSSDSSTNLHSPNPS----DDGADTPL-AQSDEEEERGDGG 154
LPV PT+D TT T + S++ +T SP P +DG DTP A+S + E G
Sbjct: 52 LPVQPTADTTTHVTPRNGSTEPATAPGSPEPPSELLEDGQDTPTSAESPDAPEENIAG 109
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.307 0.128 0.365
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,212,572
Number of Sequences: 37866
Number of extensions: 418863
Number of successful extensions: 3810
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 170
Number of HSP's successfully gapped in prelim test: 235
Number of HSP's that attempted gapping in prelim test: 2719
Number of HSP's gapped (non-prelim): 962
length of query: 161
length of database: 18,247,518
effective HSP length: 94
effective length of query: 67
effective length of database: 14,688,114
effective search space: 984103638
effective search space used: 984103638
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.