Guide to the Human Genome
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Name: DTNBP1 Sequence: fasta or formatted (270aa) NCBI GI: 34304370
Description:

dystrobrevin binding protein 1 isoform c

Referenced in:

Lysosomes and Related Organelles

Other entries for this name:
alt prot [351aa] dystrobrevin binding protein 1 isoform a
alt prot [303aa] dystrobrevin binding protein 1 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.3         17           1
 C cysteine            1.9          5           1
 D aspartate           6.3         17           1
 E glutamate          14.4         39           3
 F phenylalanine       2.2          6           2
 G glycine             3.7         10           2
 H histidine           2.6          7           1
 I isoleucine          2.2          6           1
 K lysine              5.2         14           3
 L leucine            11.1         30           2
 M methionine          4.1         11           1
 N asparagine          3.7         10           2
 P proline             3.7         10           2
 Q glutamine           8.1         22           2
 R arginine            3.0          8           2
 S serine              9.6         26           4
 T threonine           5.9         16           1
 V valine              4.4         12           2
 W tryptophan          0.4          1           1
 Y tyrosine            1.1          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   dystrobrevin binding protein 1 isoform c 
DTNBP1                1.000   dystrobrevin binding protein 1 isoform a 
DTNBP1                0.690   dystrobrevin binding protein 1 isoform b 
DBNDD2                0.153   SCF apoptosis response protein 1 isoform a 
DBNDD2                0.153   SCF apoptosis response protein 1 isoform a 
DBNDD2                0.153   SCF apoptosis response protein 1 isoform a 
DBNDD2                0.106   SCF apoptosis response protein 1 isoform b 
DBNDD2                0.106   SCF apoptosis response protein 1 isoform b 
DBNDD2                0.106   SCF apoptosis response protein 1 isoform b 
DBNDD1                0.063   dysbindin (dystrobrevin binding protein 1) domain c...
DBNDD1                0.063   dysbindin (dystrobrevin binding protein 1) domain c...
MYH14                 0.047   myosin, heavy chain 14 isoform 1 
MYH14                 0.047   myosin, heavy chain 14 isoform 2 
MYH14                 0.047   myosin, heavy chain 14 isoform 3 
IVL                   0.047   involucrin 
MYH15                 0.043   myosin, heavy polypeptide 15 
MYH9                  0.039   myosin, heavy polypeptide 9, non-muscle 
ANKRD18A              0.037   PREDICTED: ankyrin repeat domain 18A 
ANKRD18A              0.037   PREDICTED: ankyrin repeat domain 18A 
ANKRD18A              0.037   PREDICTED: ankyrin repeat domain 18A 
MYH10                 0.037   myosin, heavy polypeptide 10, non-muscle 
PELP1                 0.035   proline, glutamic acid and leucine rich protein 1 [...
MYH11                 0.033   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.033   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.033   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.033   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
ERC2                  0.033   cytomatrix protein p110 
CLIP1                 0.031   restin isoform b 
CLIP1                 0.031   restin isoform a 
AKAP9                 0.031   A-kinase anchor protein 9 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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