Guide to the Human Genome
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Name: DTNBP1 Sequence: fasta or formatted (351aa) NCBI GI: 19549327
Description:

dystrobrevin binding protein 1 isoform a

Referenced in:

Lysosomes and Related Organelles

Other entries for this name:
alt prot [303aa] dystrobrevin binding protein 1 isoform b
alt prot [270aa] dystrobrevin binding protein 1 isoform c
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         24           2
 C cysteine            1.7          6           1
 D aspartate           6.3         22           1
 E glutamate          13.1         46           3
 F phenylalanine       2.3          8           2
 G glycine             3.7         13           2
 H histidine           2.3          8           1
 I isoleucine          1.7          6           1
 K lysine              6.0         21           3
 L leucine            12.0         42           2
 M methionine          3.4         12           1
 N asparagine          2.8         10           2
 P proline             3.7         13           2
 Q glutamine           6.8         24           2
 R arginine            4.3         15           2
 S serine             10.0         35           4
 T threonine           6.0         21           1
 V valine              5.1         18           2
 W tryptophan          0.6          2           1
 Y tyrosine            1.4          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   dystrobrevin binding protein 1 isoform a 
DTNBP1                0.767   dystrobrevin binding protein 1 isoform c 
DTNBP1                0.762   dystrobrevin binding protein 1 isoform b 
DBNDD2                0.117   SCF apoptosis response protein 1 isoform a 
DBNDD2                0.117   SCF apoptosis response protein 1 isoform a 
DBNDD2                0.117   SCF apoptosis response protein 1 isoform a 
DBNDD2                0.081   SCF apoptosis response protein 1 isoform b 
DBNDD2                0.081   SCF apoptosis response protein 1 isoform b 
DBNDD2                0.081   SCF apoptosis response protein 1 isoform b 
DBNDD1                0.048   dysbindin (dystrobrevin binding protein 1) domain c...
DBNDD1                0.048   dysbindin (dystrobrevin binding protein 1) domain c...
ERC2                  0.041   cytomatrix protein p110 
MYH14                 0.039   myosin, heavy chain 14 isoform 1 
MYH14                 0.039   myosin, heavy chain 14 isoform 2 
MYH14                 0.039   myosin, heavy chain 14 isoform 3 
MYH9                  0.036   myosin, heavy polypeptide 9, non-muscle 
IVL                   0.036   involucrin 
ERC1                  0.035   RAB6-interacting protein 2 isoform epsilon 
ERC1                  0.035   RAB6-interacting protein 2 isoform delta 
MYH15                 0.033   myosin, heavy polypeptide 15 
EEA1                  0.032   early endosome antigen 1, 162kD 
C6orf97               0.029   hypothetical protein LOC80129 
ANKRD18A              0.029   PREDICTED: ankyrin repeat domain 18A 
ANKRD18A              0.029   PREDICTED: ankyrin repeat domain 18A 
ANKRD18A              0.029   PREDICTED: ankyrin repeat domain 18A 
GOLGB1                0.029   golgi autoantigen, golgin subfamily b, macrogolgin ...
MYH10                 0.029   myosin, heavy polypeptide 10, non-muscle 
TPR                   0.029   nuclear pore complex-associated protein TPR 
CIT                   0.029   citron 
GOLGA3                0.029   Golgi autoantigen, golgin subfamily a, 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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