Guide to the Human Genome
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Name: DBNDD2 Sequence: fasta or formatted (161aa) NCBI GI: 115299750
Description:

SCF apoptosis response protein 1 isoform a

Not currently referenced in the text

Other entries for this name:
alt mRNA {161aa} SCF apoptosis response protein 1 isoform a
alt prot {112aa} SCF apoptosis response protein 1 isoform b
alt prot {112aa} SCF apoptosis response protein 1 isoform b
alt prot {112aa} SCF apoptosis response protein 1 isoform b
alt mRNA {161aa} SCF apoptosis response protein 1 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.0          8           2
 C cysteine            1.2          2           1
 D aspartate           9.9         16           2
 E glutamate          10.6         17           4
 F phenylalanine       3.1          5           2
 G glycine             5.0          8           2
 H histidine           2.5          4           1
 I isoleucine          2.5          4           1
 K lysine              0.6          1           1
 L leucine             9.9         16           1
 M methionine          1.9          3           1
 N asparagine          3.1          5           1
 P proline            11.2         18           3
 Q glutamine           5.0          8           2
 R arginine            5.6          9           1
 S serine             13.7         22           6
 T threonine           5.6          9           2
 V valine              3.7          6           1
 W tryptophan          0.0          0           0
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   SCF apoptosis response protein 1 isoform a 
DBNDD2                1.000   SCF apoptosis response protein 1 isoform a 
DBNDD2                1.000   SCF apoptosis response protein 1 isoform a 
DBNDD2                0.563   SCF apoptosis response protein 1 isoform b 
DBNDD2                0.563   SCF apoptosis response protein 1 isoform b 
DBNDD2                0.563   SCF apoptosis response protein 1 isoform b 
DTNBP1                0.258   dystrobrevin binding protein 1 isoform c 
DTNBP1                0.258   dystrobrevin binding protein 1 isoform a 
DTNBP1                0.182   dystrobrevin binding protein 1 isoform b 
DBNDD1                0.056   dysbindin (dystrobrevin binding protein 1) domain c...
DBNDD1                0.056   dysbindin (dystrobrevin binding protein 1) domain c...
BSN                   0.043   bassoon protein 
LEO1                  0.040   Leo1, Paf1/RNA polymerase II complex component, homo...
LOC100133142          0.040   PREDICTED: similar to zinc finger protein 208 [Homo...
LOC100133142          0.040   PREDICTED: similar to zinc finger protein 208 [Homo...
SETD1B                0.036   SET domain containing 1B 
ANKHD1                0.036   ankyrin repeat and KH domain containing 1 isoform 1 ...
ANKHD1-EIF4EBP3       0.036   ANKHD1-EIF4EBP3 protein 
KDM6B                 0.033   lysine (K)-specific demethylase 6B 
PPFIA3                0.033   PTPRF interacting protein alpha 3 
NACA                  0.033   nascent polypeptide-associated complex alpha subuni...
AFF1                  0.030   myeloid/lymphoid or mixed-lineage leukemia trithorax ...
ACRC                  0.030   ACRC protein 
TRIP10                0.030   thyroid hormone receptor interactor 10 
CACNA1F               0.030   calcium channel, voltage-dependent, L type, alpha 1F...
COL27A1               0.026   collagen, type XXVII, alpha 1 
MUC16                 0.026   mucin 16 
SETD1A                0.026   SET domain containing 1A 
ACIN1                 0.026   apoptotic chromatin condensation inducer 1 
COL18A1               0.026   alpha 1 type XVIII collagen isoform 3 precursor [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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