Guide to the Human Genome
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Name: DBNDD2 Sequence: fasta or formatted (112aa) NCBI GI: 115299756
Description:

SCF apoptosis response protein 1 isoform b

Not currently referenced in the text

Other entries for this name:
alt prot {161aa} SCF apoptosis response protein 1 isoform a
alt prot {161aa} SCF apoptosis response protein 1 isoform a
alt mRNA {112aa} SCF apoptosis response protein 1 isoform b
alt mRNA {112aa} SCF apoptosis response protein 1 isoform b
alt prot {161aa} SCF apoptosis response protein 1 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5          5           2
 C cysteine            1.8          2           1
 D aspartate           8.9         10           1
 E glutamate           9.8         11           1
 F phenylalanine       6.2          7           2
 G glycine             3.6          4           1
 H histidine           1.8          2           1
 I isoleucine          3.6          4           1
 K lysine              0.9          1           1
 L leucine            11.6         13           1
 M methionine          2.7          3           1
 N asparagine          1.8          2           1
 P proline            13.4         15           3
 Q glutamine           7.1          8           2
 R arginine            6.2          7           1
 S serine              8.0          9           2
 T threonine           2.7          3           1
 V valine              5.4          6           1
 W tryptophan          0.0          0           0
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   SCF apoptosis response protein 1 isoform b 
DBNDD2                1.000   SCF apoptosis response protein 1 isoform b 
DBNDD2                1.000   SCF apoptosis response protein 1 isoform b 
DBNDD2                0.825   SCF apoptosis response protein 1 isoform a 
DBNDD2                0.825   SCF apoptosis response protein 1 isoform a 
DBNDD2                0.825   SCF apoptosis response protein 1 isoform a 
DTNBP1                0.262   dystrobrevin binding protein 1 isoform c 
DTNBP1                0.262   dystrobrevin binding protein 1 isoform b 
DTNBP1                0.262   dystrobrevin binding protein 1 isoform a 
DBNDD1                0.083   dysbindin (dystrobrevin binding protein 1) domain c...
DBNDD1                0.083   dysbindin (dystrobrevin binding protein 1) domain c...
CDH22                 0.034   cadherin 22 precursor 
GGA3                  0.024   ADP-ribosylation factor binding protein 3 isoform sh...
GGA3                  0.024   ADP-ribosylation factor binding protein 3 isoform lo...
HS3ST3B1              0.019   heparan sulfate D-glucosaminyl 3-O-sulfotransferase 3...
SCRIB                 0.019   scribble isoform b 
SCRIB                 0.019   scribble isoform a 
PNPLA1                0.019   patatin-like phospholipase domain containing 1 isof...
PNPLA1                0.019   patatin-like phospholipase domain containing 1 isof...
PNPLA1                0.019   patatin-like phospholipase domain containing 1 isof...
ATF5                  0.015   activating transcription factor 5 
ZNF839                0.015   zinc finger protein 839 
BARX2                 0.015   BarH-like homeobox 2 
LOC339742             0.010   PREDICTED: hypothetical protein 
LOC100134240          0.010   PREDICTED: hypothetical protein 
LOC100133638          0.010   PREDICTED: hypothetical protein 
LOC339742             0.010   PREDICTED: hypothetical protein 
GJA3                  0.010   connexin 46 
GOLGA8B               0.010   golgi autoantigen, golgin subfamily a, 8B 
GOLGA8A               0.010   golgi autoantigen, golgin subfamily a, 8A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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