BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|115298648 mutY homolog isoform 2 [Homo sapiens] (535 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|115298648 mutY homolog isoform 2 [Homo sapiens] 1084 0.0 gi|6912520 mutY homolog isoform 1 [Homo sapiens] 1075 0.0 gi|190358497 mutY homolog isoform 5 [Homo sapiens] 1074 0.0 gi|115298654 mutY homolog isoform 4 [Homo sapiens] 1057 0.0 gi|115298652 mutY homolog isoform 4 [Homo sapiens] 1057 0.0 gi|115298650 mutY homolog isoform 3 [Homo sapiens] 1052 0.0 gi|4505471 nth endonuclease III-like 1 [Homo sapiens] 47 3e-05 gi|55749678 ninein-like [Homo sapiens] 32 1.5 gi|4506775 membrane-bound transcription factor site-1 protease p... 32 1.5 gi|71773110 apolipoprotein A-IV precursor [Homo sapiens] 32 1.9 gi|40254439 endothelial PAS domain protein 1 [Homo sapiens] 31 3.2 gi|194272142 myosin IXB isoform 2 [Homo sapiens] 31 3.2 gi|33356170 myosin IXB isoform 1 [Homo sapiens] 31 3.2 gi|9951913 G protein-coupled receptor 162 isoform 2 [Homo sapiens] 31 3.2 gi|19913396 smoothelin isoform b [Homo sapiens] 30 4.2 gi|19913394 smoothelin isoform c [Homo sapiens] 30 4.2 gi|19913398 smoothelin isoform a [Homo sapiens] 30 4.2 gi|5729858 nuclear receptor coactivator 2 [Homo sapiens] 30 5.5 gi|89257348 homeo box HB9 [Homo sapiens] 30 5.5 gi|11545739 F-box and WD repeat domain containing 4 [Homo sapiens] 30 5.5 gi|120587029 signal peptide, CUB domain, EGF-like 1 [Homo sapiens] 30 5.5 gi|239754987 PREDICTED: hypothetical protein [Homo sapiens] 30 7.2 gi|59710109 hypothetical protein LOC51300 [Homo sapiens] 30 7.2 gi|239754668 PREDICTED: mucin 12 [Homo sapiens] 29 9.4 gi|239749217 PREDICTED: similar to Mucin-12, partial [Homo sapiens] 29 9.4 gi|239743293 PREDICTED: mucin 12 [Homo sapiens] 29 9.4 gi|239508976 PREDICTED: mucin 12, cell surface associated [Homo ... 29 9.4 gi|34304360 nephrocystin 3 [Homo sapiens] 29 9.4 gi|42741652 RPA-binding trans-activator [Homo sapiens] 29 9.4 gi|15718684 RPA-binding trans-activator [Homo sapiens] 29 9.4 >gi|115298648 mutY homolog isoform 2 [Homo sapiens] Length = 535 Score = 1084 bits (2803), Expect = 0.0 Identities = 535/535 (100%), Positives = 535/535 (100%) Query: 1 MTPLVSRLSRLWAIMRKPRAAVGSGHRKQAASQEGRQKHAKNNSQAKPSACDGLARQPEE 60 MTPLVSRLSRLWAIMRKPRAAVGSGHRKQAASQEGRQKHAKNNSQAKPSACDGLARQPEE Sbjct: 1 MTPLVSRLSRLWAIMRKPRAAVGSGHRKQAASQEGRQKHAKNNSQAKPSACDGLARQPEE 60 Query: 61 VVLQASVSSYHLFRDVAEVTAFRGSLLSWYDQEKRDLPWRRRAEDEMDLDRRAYAVWVSE 120 VVLQASVSSYHLFRDVAEVTAFRGSLLSWYDQEKRDLPWRRRAEDEMDLDRRAYAVWVSE Sbjct: 61 VVLQASVSSYHLFRDVAEVTAFRGSLLSWYDQEKRDLPWRRRAEDEMDLDRRAYAVWVSE 120 Query: 121 VMLQQTQVATVINYYTGWMQKWPTLQDLASASLEEVNQLWAGLGYYSRGRRLQEGARKVV 180 VMLQQTQVATVINYYTGWMQKWPTLQDLASASLEEVNQLWAGLGYYSRGRRLQEGARKVV Sbjct: 121 VMLQQTQVATVINYYTGWMQKWPTLQDLASASLEEVNQLWAGLGYYSRGRRLQEGARKVV 180 Query: 181 EELGGHMPRTAETLQQLLPGVGRYTAGAIASIAFGQATGVVDGNVARVLCRVRAIGADPS 240 EELGGHMPRTAETLQQLLPGVGRYTAGAIASIAFGQATGVVDGNVARVLCRVRAIGADPS Sbjct: 181 EELGGHMPRTAETLQQLLPGVGRYTAGAIASIAFGQATGVVDGNVARVLCRVRAIGADPS 240 Query: 241 STLVSQQLWGLAQQLVDPARPGDFNQAAMELGATVCTPQRPLCSQCPVESLCRARQRVEQ 300 STLVSQQLWGLAQQLVDPARPGDFNQAAMELGATVCTPQRPLCSQCPVESLCRARQRVEQ Sbjct: 241 STLVSQQLWGLAQQLVDPARPGDFNQAAMELGATVCTPQRPLCSQCPVESLCRARQRVEQ 300 Query: 301 EQLLASGSLSGSPDVEECAPNTGQCHLCLPPSEPWDQTLGVVNFPRKASRKPPREESSAT 360 EQLLASGSLSGSPDVEECAPNTGQCHLCLPPSEPWDQTLGVVNFPRKASRKPPREESSAT Sbjct: 301 EQLLASGSLSGSPDVEECAPNTGQCHLCLPPSEPWDQTLGVVNFPRKASRKPPREESSAT 360 Query: 361 CVLEQPGALGAQILLVQRPNSGLLAGLWEFPSVTWEPSEQLQRKALLQELQRWAGPLPAT 420 CVLEQPGALGAQILLVQRPNSGLLAGLWEFPSVTWEPSEQLQRKALLQELQRWAGPLPAT Sbjct: 361 CVLEQPGALGAQILLVQRPNSGLLAGLWEFPSVTWEPSEQLQRKALLQELQRWAGPLPAT 420 Query: 421 HLRHLGEVVHTFSHIKLTYQVYGLALEGQTPVTTVPPGARWLTQEEFHTAAVSTAMKKVF 480 HLRHLGEVVHTFSHIKLTYQVYGLALEGQTPVTTVPPGARWLTQEEFHTAAVSTAMKKVF Sbjct: 421 HLRHLGEVVHTFSHIKLTYQVYGLALEGQTPVTTVPPGARWLTQEEFHTAAVSTAMKKVF 480 Query: 481 RVYQGQQPGTCMGSKRSQVSSPCSRKKPRMGQQVLDNFFRSHISTDAHSLNSAAQ 535 RVYQGQQPGTCMGSKRSQVSSPCSRKKPRMGQQVLDNFFRSHISTDAHSLNSAAQ Sbjct: 481 RVYQGQQPGTCMGSKRSQVSSPCSRKKPRMGQQVLDNFFRSHISTDAHSLNSAAQ 535 >gi|6912520 mutY homolog isoform 1 [Homo sapiens] Length = 546 Score = 1075 bits (2781), Expect = 0.0 Identities = 535/546 (97%), Positives = 535/546 (97%), Gaps = 11/546 (2%) Query: 1 MTPLVSRLSRLWAIMRKPRAAVGSGHRKQAASQEGRQKHAKNNSQAKPSACDG------- 53 MTPLVSRLSRLWAIMRKPRAAVGSGHRKQAASQEGRQKHAKNNSQAKPSACDG Sbjct: 1 MTPLVSRLSRLWAIMRKPRAAVGSGHRKQAASQEGRQKHAKNNSQAKPSACDGMIAECPG 60 Query: 54 ----LARQPEEVVLQASVSSYHLFRDVAEVTAFRGSLLSWYDQEKRDLPWRRRAEDEMDL 109 LARQPEEVVLQASVSSYHLFRDVAEVTAFRGSLLSWYDQEKRDLPWRRRAEDEMDL Sbjct: 61 APAGLARQPEEVVLQASVSSYHLFRDVAEVTAFRGSLLSWYDQEKRDLPWRRRAEDEMDL 120 Query: 110 DRRAYAVWVSEVMLQQTQVATVINYYTGWMQKWPTLQDLASASLEEVNQLWAGLGYYSRG 169 DRRAYAVWVSEVMLQQTQVATVINYYTGWMQKWPTLQDLASASLEEVNQLWAGLGYYSRG Sbjct: 121 DRRAYAVWVSEVMLQQTQVATVINYYTGWMQKWPTLQDLASASLEEVNQLWAGLGYYSRG 180 Query: 170 RRLQEGARKVVEELGGHMPRTAETLQQLLPGVGRYTAGAIASIAFGQATGVVDGNVARVL 229 RRLQEGARKVVEELGGHMPRTAETLQQLLPGVGRYTAGAIASIAFGQATGVVDGNVARVL Sbjct: 181 RRLQEGARKVVEELGGHMPRTAETLQQLLPGVGRYTAGAIASIAFGQATGVVDGNVARVL 240 Query: 230 CRVRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFNQAAMELGATVCTPQRPLCSQCPVE 289 CRVRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFNQAAMELGATVCTPQRPLCSQCPVE Sbjct: 241 CRVRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFNQAAMELGATVCTPQRPLCSQCPVE 300 Query: 290 SLCRARQRVEQEQLLASGSLSGSPDVEECAPNTGQCHLCLPPSEPWDQTLGVVNFPRKAS 349 SLCRARQRVEQEQLLASGSLSGSPDVEECAPNTGQCHLCLPPSEPWDQTLGVVNFPRKAS Sbjct: 301 SLCRARQRVEQEQLLASGSLSGSPDVEECAPNTGQCHLCLPPSEPWDQTLGVVNFPRKAS 360 Query: 350 RKPPREESSATCVLEQPGALGAQILLVQRPNSGLLAGLWEFPSVTWEPSEQLQRKALLQE 409 RKPPREESSATCVLEQPGALGAQILLVQRPNSGLLAGLWEFPSVTWEPSEQLQRKALLQE Sbjct: 361 RKPPREESSATCVLEQPGALGAQILLVQRPNSGLLAGLWEFPSVTWEPSEQLQRKALLQE 420 Query: 410 LQRWAGPLPATHLRHLGEVVHTFSHIKLTYQVYGLALEGQTPVTTVPPGARWLTQEEFHT 469 LQRWAGPLPATHLRHLGEVVHTFSHIKLTYQVYGLALEGQTPVTTVPPGARWLTQEEFHT Sbjct: 421 LQRWAGPLPATHLRHLGEVVHTFSHIKLTYQVYGLALEGQTPVTTVPPGARWLTQEEFHT 480 Query: 470 AAVSTAMKKVFRVYQGQQPGTCMGSKRSQVSSPCSRKKPRMGQQVLDNFFRSHISTDAHS 529 AAVSTAMKKVFRVYQGQQPGTCMGSKRSQVSSPCSRKKPRMGQQVLDNFFRSHISTDAHS Sbjct: 481 AAVSTAMKKVFRVYQGQQPGTCMGSKRSQVSSPCSRKKPRMGQQVLDNFFRSHISTDAHS 540 Query: 530 LNSAAQ 535 LNSAAQ Sbjct: 541 LNSAAQ 546 >gi|190358497 mutY homolog isoform 5 [Homo sapiens] Length = 549 Score = 1074 bits (2778), Expect = 0.0 Identities = 535/549 (97%), Positives = 535/549 (97%), Gaps = 14/549 (2%) Query: 1 MTPLVSRLSRLWAIMRKPRAAVGSGHRKQAASQEGRQKHAKNNSQAKPSACD-------- 52 MTPLVSRLSRLWAIMRKPRAAVGSGHRKQAASQEGRQKHAKNNSQAKPSACD Sbjct: 1 MTPLVSRLSRLWAIMRKPRAAVGSGHRKQAASQEGRQKHAKNNSQAKPSACDACAGMIAE 60 Query: 53 ------GLARQPEEVVLQASVSSYHLFRDVAEVTAFRGSLLSWYDQEKRDLPWRRRAEDE 106 GLARQPEEVVLQASVSSYHLFRDVAEVTAFRGSLLSWYDQEKRDLPWRRRAEDE Sbjct: 61 CPGAPAGLARQPEEVVLQASVSSYHLFRDVAEVTAFRGSLLSWYDQEKRDLPWRRRAEDE 120 Query: 107 MDLDRRAYAVWVSEVMLQQTQVATVINYYTGWMQKWPTLQDLASASLEEVNQLWAGLGYY 166 MDLDRRAYAVWVSEVMLQQTQVATVINYYTGWMQKWPTLQDLASASLEEVNQLWAGLGYY Sbjct: 121 MDLDRRAYAVWVSEVMLQQTQVATVINYYTGWMQKWPTLQDLASASLEEVNQLWAGLGYY 180 Query: 167 SRGRRLQEGARKVVEELGGHMPRTAETLQQLLPGVGRYTAGAIASIAFGQATGVVDGNVA 226 SRGRRLQEGARKVVEELGGHMPRTAETLQQLLPGVGRYTAGAIASIAFGQATGVVDGNVA Sbjct: 181 SRGRRLQEGARKVVEELGGHMPRTAETLQQLLPGVGRYTAGAIASIAFGQATGVVDGNVA 240 Query: 227 RVLCRVRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFNQAAMELGATVCTPQRPLCSQC 286 RVLCRVRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFNQAAMELGATVCTPQRPLCSQC Sbjct: 241 RVLCRVRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFNQAAMELGATVCTPQRPLCSQC 300 Query: 287 PVESLCRARQRVEQEQLLASGSLSGSPDVEECAPNTGQCHLCLPPSEPWDQTLGVVNFPR 346 PVESLCRARQRVEQEQLLASGSLSGSPDVEECAPNTGQCHLCLPPSEPWDQTLGVVNFPR Sbjct: 301 PVESLCRARQRVEQEQLLASGSLSGSPDVEECAPNTGQCHLCLPPSEPWDQTLGVVNFPR 360 Query: 347 KASRKPPREESSATCVLEQPGALGAQILLVQRPNSGLLAGLWEFPSVTWEPSEQLQRKAL 406 KASRKPPREESSATCVLEQPGALGAQILLVQRPNSGLLAGLWEFPSVTWEPSEQLQRKAL Sbjct: 361 KASRKPPREESSATCVLEQPGALGAQILLVQRPNSGLLAGLWEFPSVTWEPSEQLQRKAL 420 Query: 407 LQELQRWAGPLPATHLRHLGEVVHTFSHIKLTYQVYGLALEGQTPVTTVPPGARWLTQEE 466 LQELQRWAGPLPATHLRHLGEVVHTFSHIKLTYQVYGLALEGQTPVTTVPPGARWLTQEE Sbjct: 421 LQELQRWAGPLPATHLRHLGEVVHTFSHIKLTYQVYGLALEGQTPVTTVPPGARWLTQEE 480 Query: 467 FHTAAVSTAMKKVFRVYQGQQPGTCMGSKRSQVSSPCSRKKPRMGQQVLDNFFRSHISTD 526 FHTAAVSTAMKKVFRVYQGQQPGTCMGSKRSQVSSPCSRKKPRMGQQVLDNFFRSHISTD Sbjct: 481 FHTAAVSTAMKKVFRVYQGQQPGTCMGSKRSQVSSPCSRKKPRMGQQVLDNFFRSHISTD 540 Query: 527 AHSLNSAAQ 535 AHSLNSAAQ Sbjct: 541 AHSLNSAAQ 549 >gi|115298654 mutY homolog isoform 4 [Homo sapiens] Length = 521 Score = 1057 bits (2733), Expect = 0.0 Identities = 521/521 (100%), Positives = 521/521 (100%) Query: 15 MRKPRAAVGSGHRKQAASQEGRQKHAKNNSQAKPSACDGLARQPEEVVLQASVSSYHLFR 74 MRKPRAAVGSGHRKQAASQEGRQKHAKNNSQAKPSACDGLARQPEEVVLQASVSSYHLFR Sbjct: 1 MRKPRAAVGSGHRKQAASQEGRQKHAKNNSQAKPSACDGLARQPEEVVLQASVSSYHLFR 60 Query: 75 DVAEVTAFRGSLLSWYDQEKRDLPWRRRAEDEMDLDRRAYAVWVSEVMLQQTQVATVINY 134 DVAEVTAFRGSLLSWYDQEKRDLPWRRRAEDEMDLDRRAYAVWVSEVMLQQTQVATVINY Sbjct: 61 DVAEVTAFRGSLLSWYDQEKRDLPWRRRAEDEMDLDRRAYAVWVSEVMLQQTQVATVINY 120 Query: 135 YTGWMQKWPTLQDLASASLEEVNQLWAGLGYYSRGRRLQEGARKVVEELGGHMPRTAETL 194 YTGWMQKWPTLQDLASASLEEVNQLWAGLGYYSRGRRLQEGARKVVEELGGHMPRTAETL Sbjct: 121 YTGWMQKWPTLQDLASASLEEVNQLWAGLGYYSRGRRLQEGARKVVEELGGHMPRTAETL 180 Query: 195 QQLLPGVGRYTAGAIASIAFGQATGVVDGNVARVLCRVRAIGADPSSTLVSQQLWGLAQQ 254 QQLLPGVGRYTAGAIASIAFGQATGVVDGNVARVLCRVRAIGADPSSTLVSQQLWGLAQQ Sbjct: 181 QQLLPGVGRYTAGAIASIAFGQATGVVDGNVARVLCRVRAIGADPSSTLVSQQLWGLAQQ 240 Query: 255 LVDPARPGDFNQAAMELGATVCTPQRPLCSQCPVESLCRARQRVEQEQLLASGSLSGSPD 314 LVDPARPGDFNQAAMELGATVCTPQRPLCSQCPVESLCRARQRVEQEQLLASGSLSGSPD Sbjct: 241 LVDPARPGDFNQAAMELGATVCTPQRPLCSQCPVESLCRARQRVEQEQLLASGSLSGSPD 300 Query: 315 VEECAPNTGQCHLCLPPSEPWDQTLGVVNFPRKASRKPPREESSATCVLEQPGALGAQIL 374 VEECAPNTGQCHLCLPPSEPWDQTLGVVNFPRKASRKPPREESSATCVLEQPGALGAQIL Sbjct: 301 VEECAPNTGQCHLCLPPSEPWDQTLGVVNFPRKASRKPPREESSATCVLEQPGALGAQIL 360 Query: 375 LVQRPNSGLLAGLWEFPSVTWEPSEQLQRKALLQELQRWAGPLPATHLRHLGEVVHTFSH 434 LVQRPNSGLLAGLWEFPSVTWEPSEQLQRKALLQELQRWAGPLPATHLRHLGEVVHTFSH Sbjct: 361 LVQRPNSGLLAGLWEFPSVTWEPSEQLQRKALLQELQRWAGPLPATHLRHLGEVVHTFSH 420 Query: 435 IKLTYQVYGLALEGQTPVTTVPPGARWLTQEEFHTAAVSTAMKKVFRVYQGQQPGTCMGS 494 IKLTYQVYGLALEGQTPVTTVPPGARWLTQEEFHTAAVSTAMKKVFRVYQGQQPGTCMGS Sbjct: 421 IKLTYQVYGLALEGQTPVTTVPPGARWLTQEEFHTAAVSTAMKKVFRVYQGQQPGTCMGS 480 Query: 495 KRSQVSSPCSRKKPRMGQQVLDNFFRSHISTDAHSLNSAAQ 535 KRSQVSSPCSRKKPRMGQQVLDNFFRSHISTDAHSLNSAAQ Sbjct: 481 KRSQVSSPCSRKKPRMGQQVLDNFFRSHISTDAHSLNSAAQ 521 >gi|115298652 mutY homolog isoform 4 [Homo sapiens] Length = 521 Score = 1057 bits (2733), Expect = 0.0 Identities = 521/521 (100%), Positives = 521/521 (100%) Query: 15 MRKPRAAVGSGHRKQAASQEGRQKHAKNNSQAKPSACDGLARQPEEVVLQASVSSYHLFR 74 MRKPRAAVGSGHRKQAASQEGRQKHAKNNSQAKPSACDGLARQPEEVVLQASVSSYHLFR Sbjct: 1 MRKPRAAVGSGHRKQAASQEGRQKHAKNNSQAKPSACDGLARQPEEVVLQASVSSYHLFR 60 Query: 75 DVAEVTAFRGSLLSWYDQEKRDLPWRRRAEDEMDLDRRAYAVWVSEVMLQQTQVATVINY 134 DVAEVTAFRGSLLSWYDQEKRDLPWRRRAEDEMDLDRRAYAVWVSEVMLQQTQVATVINY Sbjct: 61 DVAEVTAFRGSLLSWYDQEKRDLPWRRRAEDEMDLDRRAYAVWVSEVMLQQTQVATVINY 120 Query: 135 YTGWMQKWPTLQDLASASLEEVNQLWAGLGYYSRGRRLQEGARKVVEELGGHMPRTAETL 194 YTGWMQKWPTLQDLASASLEEVNQLWAGLGYYSRGRRLQEGARKVVEELGGHMPRTAETL Sbjct: 121 YTGWMQKWPTLQDLASASLEEVNQLWAGLGYYSRGRRLQEGARKVVEELGGHMPRTAETL 180 Query: 195 QQLLPGVGRYTAGAIASIAFGQATGVVDGNVARVLCRVRAIGADPSSTLVSQQLWGLAQQ 254 QQLLPGVGRYTAGAIASIAFGQATGVVDGNVARVLCRVRAIGADPSSTLVSQQLWGLAQQ Sbjct: 181 QQLLPGVGRYTAGAIASIAFGQATGVVDGNVARVLCRVRAIGADPSSTLVSQQLWGLAQQ 240 Query: 255 LVDPARPGDFNQAAMELGATVCTPQRPLCSQCPVESLCRARQRVEQEQLLASGSLSGSPD 314 LVDPARPGDFNQAAMELGATVCTPQRPLCSQCPVESLCRARQRVEQEQLLASGSLSGSPD Sbjct: 241 LVDPARPGDFNQAAMELGATVCTPQRPLCSQCPVESLCRARQRVEQEQLLASGSLSGSPD 300 Query: 315 VEECAPNTGQCHLCLPPSEPWDQTLGVVNFPRKASRKPPREESSATCVLEQPGALGAQIL 374 VEECAPNTGQCHLCLPPSEPWDQTLGVVNFPRKASRKPPREESSATCVLEQPGALGAQIL Sbjct: 301 VEECAPNTGQCHLCLPPSEPWDQTLGVVNFPRKASRKPPREESSATCVLEQPGALGAQIL 360 Query: 375 LVQRPNSGLLAGLWEFPSVTWEPSEQLQRKALLQELQRWAGPLPATHLRHLGEVVHTFSH 434 LVQRPNSGLLAGLWEFPSVTWEPSEQLQRKALLQELQRWAGPLPATHLRHLGEVVHTFSH Sbjct: 361 LVQRPNSGLLAGLWEFPSVTWEPSEQLQRKALLQELQRWAGPLPATHLRHLGEVVHTFSH 420 Query: 435 IKLTYQVYGLALEGQTPVTTVPPGARWLTQEEFHTAAVSTAMKKVFRVYQGQQPGTCMGS 494 IKLTYQVYGLALEGQTPVTTVPPGARWLTQEEFHTAAVSTAMKKVFRVYQGQQPGTCMGS Sbjct: 421 IKLTYQVYGLALEGQTPVTTVPPGARWLTQEEFHTAAVSTAMKKVFRVYQGQQPGTCMGS 480 Query: 495 KRSQVSSPCSRKKPRMGQQVLDNFFRSHISTDAHSLNSAAQ 535 KRSQVSSPCSRKKPRMGQQVLDNFFRSHISTDAHSLNSAAQ Sbjct: 481 KRSQVSSPCSRKKPRMGQQVLDNFFRSHISTDAHSLNSAAQ 521 >gi|115298650 mutY homolog isoform 3 [Homo sapiens] Length = 522 Score = 1052 bits (2721), Expect = 0.0 Identities = 521/522 (99%), Positives = 521/522 (99%), Gaps = 1/522 (0%) Query: 15 MRKPRAAVGSGHRKQAASQEGRQKHAKNNSQAKPSACD-GLARQPEEVVLQASVSSYHLF 73 MRKPRAAVGSGHRKQAASQEGRQKHAKNNSQAKPSACD GLARQPEEVVLQASVSSYHLF Sbjct: 1 MRKPRAAVGSGHRKQAASQEGRQKHAKNNSQAKPSACDAGLARQPEEVVLQASVSSYHLF 60 Query: 74 RDVAEVTAFRGSLLSWYDQEKRDLPWRRRAEDEMDLDRRAYAVWVSEVMLQQTQVATVIN 133 RDVAEVTAFRGSLLSWYDQEKRDLPWRRRAEDEMDLDRRAYAVWVSEVMLQQTQVATVIN Sbjct: 61 RDVAEVTAFRGSLLSWYDQEKRDLPWRRRAEDEMDLDRRAYAVWVSEVMLQQTQVATVIN 120 Query: 134 YYTGWMQKWPTLQDLASASLEEVNQLWAGLGYYSRGRRLQEGARKVVEELGGHMPRTAET 193 YYTGWMQKWPTLQDLASASLEEVNQLWAGLGYYSRGRRLQEGARKVVEELGGHMPRTAET Sbjct: 121 YYTGWMQKWPTLQDLASASLEEVNQLWAGLGYYSRGRRLQEGARKVVEELGGHMPRTAET 180 Query: 194 LQQLLPGVGRYTAGAIASIAFGQATGVVDGNVARVLCRVRAIGADPSSTLVSQQLWGLAQ 253 LQQLLPGVGRYTAGAIASIAFGQATGVVDGNVARVLCRVRAIGADPSSTLVSQQLWGLAQ Sbjct: 181 LQQLLPGVGRYTAGAIASIAFGQATGVVDGNVARVLCRVRAIGADPSSTLVSQQLWGLAQ 240 Query: 254 QLVDPARPGDFNQAAMELGATVCTPQRPLCSQCPVESLCRARQRVEQEQLLASGSLSGSP 313 QLVDPARPGDFNQAAMELGATVCTPQRPLCSQCPVESLCRARQRVEQEQLLASGSLSGSP Sbjct: 241 QLVDPARPGDFNQAAMELGATVCTPQRPLCSQCPVESLCRARQRVEQEQLLASGSLSGSP 300 Query: 314 DVEECAPNTGQCHLCLPPSEPWDQTLGVVNFPRKASRKPPREESSATCVLEQPGALGAQI 373 DVEECAPNTGQCHLCLPPSEPWDQTLGVVNFPRKASRKPPREESSATCVLEQPGALGAQI Sbjct: 301 DVEECAPNTGQCHLCLPPSEPWDQTLGVVNFPRKASRKPPREESSATCVLEQPGALGAQI 360 Query: 374 LLVQRPNSGLLAGLWEFPSVTWEPSEQLQRKALLQELQRWAGPLPATHLRHLGEVVHTFS 433 LLVQRPNSGLLAGLWEFPSVTWEPSEQLQRKALLQELQRWAGPLPATHLRHLGEVVHTFS Sbjct: 361 LLVQRPNSGLLAGLWEFPSVTWEPSEQLQRKALLQELQRWAGPLPATHLRHLGEVVHTFS 420 Query: 434 HIKLTYQVYGLALEGQTPVTTVPPGARWLTQEEFHTAAVSTAMKKVFRVYQGQQPGTCMG 493 HIKLTYQVYGLALEGQTPVTTVPPGARWLTQEEFHTAAVSTAMKKVFRVYQGQQPGTCMG Sbjct: 421 HIKLTYQVYGLALEGQTPVTTVPPGARWLTQEEFHTAAVSTAMKKVFRVYQGQQPGTCMG 480 Query: 494 SKRSQVSSPCSRKKPRMGQQVLDNFFRSHISTDAHSLNSAAQ 535 SKRSQVSSPCSRKKPRMGQQVLDNFFRSHISTDAHSLNSAAQ Sbjct: 481 SKRSQVSSPCSRKKPRMGQQVLDNFFRSHISTDAHSLNSAAQ 522 >gi|4505471 nth endonuclease III-like 1 [Homo sapiens] Length = 312 Score = 47.4 bits (111), Expect = 3e-05 Identities = 45/190 (23%), Positives = 83/190 (43%), Gaps = 12/190 (6%) Query: 112 RAYAVWVSEVMLQQTQVATVINYYTGWMQKWPTLQDLASASLEEVNQLWAGLGYY-SRGR 170 R Y V +S ++ QT+ + T+ + + +L +G++ S+ + Sbjct: 128 RRYQVLLSLMLSSQTKDQVTAGAMQRLRARGLTVDSILQTDDATLGKLIYPVGFWRSKVK 187 Query: 171 RLQEGARKVVEELGGHMPRTAETLQQLLPGVGRYTAGAIASIAFGQATGV-VDGNVARVL 229 +++ + + + GG +P + L L PGVG A ++A+G +G+ VD +V R+ Sbjct: 188 YIKQTSAILQQHYGGDIPASVAELVAL-PGVGPKMAHLAMAVAWGTVSGIAVDTHVHRIA 246 Query: 230 CRVR---AIGADPSSTLVSQQLWGLAQQLVDPARPGDFNQAAMELGATVCTPQRPLCSQC 286 R+R P T + + W L ++L + N + G C P P C C Sbjct: 247 NRLRWTKKATKSPEETRAALEEW-LPRELWH-----EINGLLVGFGQQTCLPVHPRCHAC 300 Query: 287 PVESLCRARQ 296 ++LC A Q Sbjct: 301 LNQALCPAAQ 310 >gi|55749678 ninein-like [Homo sapiens] Length = 1382 Score = 32.0 bits (71), Expect = 1.5 Identities = 33/117 (28%), Positives = 43/117 (36%), Gaps = 6/117 (5%) Query: 278 PQRPLCSQCPVESLCRARQRVEQEQLLASGSLSGSPDVEEC-APNTGQCHLCLPPSEPWD 336 P RP C + P+ L R +E A + D E +P PSE W Sbjct: 848 PLRPGCGERPLAWLAPGDGRESEEAAGAGPRRRQAQDTEATQSPAPAPAPASHGPSERWS 907 Query: 337 --QTLGVVNFPRKASRKPPREESSATCVLEQPGALGAQILLVQRPNSGLLAGLWEFP 391 Q GV K P ++ LEQPGA +L +R S +WE P Sbjct: 908 RMQPCGVDG---DIVPKEPEPFGASAAGLEQPGARELPLLGTERDASQTQPRMWEPP 961 >gi|4506775 membrane-bound transcription factor site-1 protease preproprotein [Homo sapiens] Length = 1052 Score = 32.0 bits (71), Expect = 1.5 Identities = 17/48 (35%), Positives = 24/48 (50%) Query: 136 TGWMQKWPTLQDLASASLEEVNQLWAGLGYYSRGRRLQEGARKVVEEL 183 T W QKW + + L ASL + W G +S R L+ R+V + L Sbjct: 150 TRWSQKWQSSRPLRRASLSLGSGFWHATGRHSSRRLLRAIPRQVAQTL 197 >gi|71773110 apolipoprotein A-IV precursor [Homo sapiens] Length = 396 Score = 31.6 bits (70), Expect = 1.9 Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Query: 150 SASLEEVNQLWAGLGYYSRG--RRLQEGARKVVEELGGHMPRTAETLQQLLPGVG 202 SAS EE+ Q A L RG R EG +K + ELGGH+ + E ++ + G Sbjct: 257 SASAEELRQRLAPLAEDVRGNLRGNTEGLQKSLAELGGHLDQQVEEFRRRVEPYG 311 >gi|40254439 endothelial PAS domain protein 1 [Homo sapiens] Length = 870 Score = 30.8 bits (68), Expect = 3.2 Identities = 19/81 (23%), Positives = 31/81 (38%) Query: 455 VPPGARWLTQEEFHTAAVSTAMKKVFRVYQGQQPGTCMGSKRSQVSSPCSRKKPRMGQQV 514 +PP W T+ H+ F V Q PG+ S S SS + P Sbjct: 432 LPPSQPWATELRSHSTQSEAGSLPAFTVPQAAAPGSTTPSATSSSSSCSTPNSPEDYYTS 491 Query: 515 LDNFFRSHISTDAHSLNSAAQ 535 LDN + + ++++ A+ Sbjct: 492 LDNDLKIEVIEKLFAMDTEAK 512 >gi|194272142 myosin IXB isoform 2 [Homo sapiens] Length = 2022 Score = 30.8 bits (68), Expect = 3.2 Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 11/88 (12%) Query: 12 WAIMRKPRAAVGSGHRKQAASQEGRQKHAKNNSQAKPSACDGLARQPEEVVLQASVSSYH 71 WA++R AA+ R A +E + A+ +A + G PEE+ AS S Sbjct: 685 WAVLR---AAI----RAMAVLREAGRLRAERAEKAAGMSSPGAQSHPEELPRGASTPSEK 737 Query: 72 LFRDVAE--VTAFRGSLLSWYDQEKRDL 97 L+RD+ + + +G L W ++ R L Sbjct: 738 LYRDLHNQMIKSIKG--LPWQGEDPRSL 763 >gi|33356170 myosin IXB isoform 1 [Homo sapiens] Length = 2157 Score = 30.8 bits (68), Expect = 3.2 Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 11/88 (12%) Query: 12 WAIMRKPRAAVGSGHRKQAASQEGRQKHAKNNSQAKPSACDGLARQPEEVVLQASVSSYH 71 WA++R AA+ R A +E + A+ +A + G PEE+ AS S Sbjct: 685 WAVLR---AAI----RAMAVLREAGRLRAERAEKAAGMSSPGAQSHPEELPRGASTPSEK 737 Query: 72 LFRDVAE--VTAFRGSLLSWYDQEKRDL 97 L+RD+ + + +G L W ++ R L Sbjct: 738 LYRDLHNQMIKSIKG--LPWQGEDPRSL 763 >gi|9951913 G protein-coupled receptor 162 isoform 2 [Homo sapiens] Length = 588 Score = 30.8 bits (68), Expect = 3.2 Identities = 24/101 (23%), Positives = 45/101 (44%), Gaps = 16/101 (15%) Query: 100 RRRAEDEMDLDRRAYAVWVSE---VMLQQTQVATVINYYTGWMQKWPTLQDLASA---SL 153 RR+A + D + V+VS + L ++Y+ WM +WP L++A +L Sbjct: 76 RRQASSDYDWNESICKVFVSTYYTLALATCFTVASLSYHRMWMVRWPVNYRLSNAKKQAL 135 Query: 154 EEVNQLW---------AGLGYYSRGRR-LQEGARKVVEELG 184 V +W +G+++ G R G + +V ++G Sbjct: 136 HAVMGIWMVSFILSTLPSIGWHNNGERYYARGCQFIVSKIG 176 >gi|19913396 smoothelin isoform b [Homo sapiens] Length = 915 Score = 30.4 bits (67), Expect = 4.2 Identities = 22/78 (28%), Positives = 31/78 (39%), Gaps = 1/78 (1%) Query: 292 CRARQRVEQEQLLASGSLSGSPDVEECAPNTGQCHLCLPPSEPWDQTLGVVNFPRKASRK 351 C +R EQEQ + +P+ T L PP + P AS + Sbjct: 156 CEVPEREEQEQQAEVSKPTPTPEGTSQDVTTVTLLLRAPPGSTSSSPASPSSSPTPASPE 215 Query: 352 PPREESSATCV-LEQPGA 368 PP E + A C+ E PG+ Sbjct: 216 PPLEPAEAQCLTAEVPGS 233 >gi|19913394 smoothelin isoform c [Homo sapiens] Length = 917 Score = 30.4 bits (67), Expect = 4.2 Identities = 22/78 (28%), Positives = 31/78 (39%), Gaps = 1/78 (1%) Query: 292 CRARQRVEQEQLLASGSLSGSPDVEECAPNTGQCHLCLPPSEPWDQTLGVVNFPRKASRK 351 C +R EQEQ + +P+ T L PP + P AS + Sbjct: 156 CEVPEREEQEQQAEVSKPTPTPEGTSQDVTTVTLLLRAPPGSTSSSPASPSSSPTPASPE 215 Query: 352 PPREESSATCV-LEQPGA 368 PP E + A C+ E PG+ Sbjct: 216 PPLEPAEAQCLTAEVPGS 233 >gi|19913398 smoothelin isoform a [Homo sapiens] Length = 940 Score = 30.4 bits (67), Expect = 4.2 Identities = 22/78 (28%), Positives = 31/78 (39%), Gaps = 1/78 (1%) Query: 292 CRARQRVEQEQLLASGSLSGSPDVEECAPNTGQCHLCLPPSEPWDQTLGVVNFPRKASRK 351 C +R EQEQ + +P+ T L PP + P AS + Sbjct: 156 CEVPEREEQEQQAEVSKPTPTPEGTSQDVTTVTLLLRAPPGSTSSSPASPSSSPTPASPE 215 Query: 352 PPREESSATCV-LEQPGA 368 PP E + A C+ E PG+ Sbjct: 216 PPLEPAEAQCLTAEVPGS 233 >gi|5729858 nuclear receptor coactivator 2 [Homo sapiens] Length = 1464 Score = 30.0 bits (66), Expect = 5.5 Identities = 23/64 (35%), Positives = 28/64 (43%), Gaps = 4/64 (6%) Query: 320 PNTGQCHLCLPPSE-PWDQTLGVVNFPRKASRKPPREESSATCVLEQPGALGAQILLVQR 378 P GQ LP P D TL P A PP SS V+ QPG +G Q ++ + Sbjct: 873 PRPGQLGRLLPNQNLPLDITL---QSPTGAGPFPPIRNSSPYSVIPQPGMMGNQGMIGNQ 929 Query: 379 PNSG 382 N G Sbjct: 930 GNLG 933 >gi|89257348 homeo box HB9 [Homo sapiens] Length = 401 Score = 30.0 bits (66), Expect = 5.5 Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 17/67 (25%) Query: 305 ASGSLSGSPDVEECAPNTGQCHLCLPPSEPWDQTLGVVNFPRKASRKPPREESSATCVLE 364 ASG SGS C+P + + PP+ P D+ R S PPR ++ +L Sbjct: 50 ASGGTSGS-----CSPASSE-----PPAAPADRL-------RAESPSPPRLLAAHCALLP 92 Query: 365 QPGALGA 371 +PG LGA Sbjct: 93 KPGFLGA 99 >gi|11545739 F-box and WD repeat domain containing 4 [Homo sapiens] Length = 412 Score = 30.0 bits (66), Expect = 5.5 Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 7/80 (8%) Query: 30 AASQEGRQKHAKNNSQAKPSACDGLARQPEEVVLQASVSSYHLFRDVAEVTAFRGSLLSW 89 AA +E ++ A S A+P+A L R PEE++L + SY R + + + W Sbjct: 4 AAGEEEEEEEAARESAARPAAGPALWRLPEELLL--LICSYLDMRALGRL----AQVCRW 57 Query: 90 YDQ-EKRDLPWRRRAEDEMD 108 + DL WRR A ++ Sbjct: 58 LRRFTSCDLLWRRIARASLN 77 >gi|120587029 signal peptide, CUB domain, EGF-like 1 [Homo sapiens] Length = 988 Score = 30.0 bits (66), Expect = 5.5 Identities = 14/25 (56%), Positives = 17/25 (68%), Gaps = 1/25 (4%) Query: 304 LASGS-LSGSPDVEECAPNTGQCHL 327 LA GS L GS DV+EC+ T CH+ Sbjct: 22 LAGGSGLPGSVDVDECSEGTDDCHI 46 >gi|239754987 PREDICTED: hypothetical protein [Homo sapiens] Length = 412 Score = 29.6 bits (65), Expect = 7.2 Identities = 44/183 (24%), Positives = 67/183 (36%), Gaps = 30/183 (16%) Query: 258 PARPGDFNQAAMELGATVCTPQRPLCSQCPVESLCRARQRVEQEQLLASGSLSGSPDVEE 317 P P + LG PQR + A + +Q L G L G+PD E Sbjct: 36 PRWPAPGRRRGFRLGPVPWRPQRHNGDEAS-RLFGSAVVKAQQVPLSLGGHLRGAPDAEP 94 Query: 318 CAPNTGQCHLCLPPSEPWDQTLGVVNFPRKASRKPPREESSAT---CVLEQPGALGAQIL 374 P G + P T +A + PR +++T C L AL AQ+ Sbjct: 95 ARPAEG--------ARPSPGT--------RARKTRPRARTASTRRPCALCPEPALRAQLG 138 Query: 375 LVQRPNS--------GLLAGLWE--FPSVTWEPSEQLQRKALLQELQRWAGPLPATHLRH 424 + R L AGL + P ++ PS++++ +A +E R P + Sbjct: 139 RLDRRGPQHRVQRALALSAGLEDAHLPCLSPRPSQEMRGEATAREGPREGAPTGCPEGKS 198 Query: 425 LGE 427 GE Sbjct: 199 CGE 201 >gi|59710109 hypothetical protein LOC51300 [Homo sapiens] Length = 285 Score = 29.6 bits (65), Expect = 7.2 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 6/66 (9%) Query: 367 GALGAQILLVQRPNSGLLAGLWEFPSVTWEPSEQLQRKALLQ-ELQRWAGPLPATHLRHL 425 G +GA L+ P GLL ++ T + +Q RKAL + +L+ W G L T HL Sbjct: 192 GIIGA---LLGTPVGGLLMAFQKYSGETVQERKQKDRKALHELKLEEWKGRLQVT--EHL 246 Query: 426 GEVVHT 431 E + + Sbjct: 247 PEKIES 252 >gi|239754668 PREDICTED: mucin 12 [Homo sapiens] Length = 1952 Score = 29.3 bits (64), Expect = 9.4 Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 14/71 (19%) Query: 15 MRKPRAAVGSGHRKQAASQEGRQKHAKNNSQAKPSACDGLARQPEEVVLQASVSSYHLFR 74 M P ++ SGH +++A+ G H K+++ PS LA +SYH Sbjct: 435 MHFPESSTTSGHSEESATFHGSTTHTKSST---PSTTAALAH-----------TSYHSSL 480 Query: 75 DVAEVTAFRGS 85 E T FR S Sbjct: 481 GSTETTHFRDS 491 >gi|239749217 PREDICTED: similar to Mucin-12, partial [Homo sapiens] Length = 861 Score = 29.3 bits (64), Expect = 9.4 Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 14/71 (19%) Query: 15 MRKPRAAVGSGHRKQAASQEGRQKHAKNNSQAKPSACDGLARQPEEVVLQASVSSYHLFR 74 M P ++ SGH +++A+ G H K+++ PS LA +SYH Sbjct: 370 MHFPESSTTSGHSEESATFHGSTTHTKSST---PSTTAALAH-----------TSYHSSL 415 Query: 75 DVAEVTAFRGS 85 E T FR S Sbjct: 416 GSTETTHFRDS 426 >gi|239743293 PREDICTED: mucin 12 [Homo sapiens] Length = 5478 Score = 29.3 bits (64), Expect = 9.4 Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 14/71 (19%) Query: 15 MRKPRAAVGSGHRKQAASQEGRQKHAKNNSQAKPSACDGLARQPEEVVLQASVSSYHLFR 74 M P ++ SGH +++A+ G H K+++ PS LA +SYH Sbjct: 514 MHFPESSTTSGHSEESATFHGSTTHTKSST---PSTTAALAH-----------TSYHSSL 559 Query: 75 DVAEVTAFRGS 85 E T FR S Sbjct: 560 GSTETTHFRDS 570 >gi|239508976 PREDICTED: mucin 12, cell surface associated [Homo sapiens] Length = 2036 Score = 29.3 bits (64), Expect = 9.4 Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 14/71 (19%) Query: 15 MRKPRAAVGSGHRKQAASQEGRQKHAKNNSQAKPSACDGLARQPEEVVLQASVSSYHLFR 74 M P ++ SGH +++A+ G H K+++ PS LA +SYH Sbjct: 1 MHFPESSTTSGHSEESATFHGSTTHTKSST---PSTTAALAH-----------TSYHSSL 46 Query: 75 DVAEVTAFRGS 85 E T FR S Sbjct: 47 GSTETTHFRDS 57 >gi|34304360 nephrocystin 3 [Homo sapiens] Length = 1330 Score = 29.3 bits (64), Expect = 9.4 Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 9/68 (13%) Query: 374 LLVQRPNSGLLAGLWEFPSVTWEPSEQLQRKALLQELQRWAGPLPATHLRHLGEVVHTFS 433 L+++R L+ W ++T +P++ LL+E RW L A RH G ++ Sbjct: 573 LIIKRLTLKLMQHSWSVSALTLDPAK------LLEEFPRWLEKLSA---RHQGSIIIVID 623 Query: 434 HIKLTYQV 441 I QV Sbjct: 624 SIDQVQQV 631 >gi|42741652 RPA-binding trans-activator [Homo sapiens] Length = 196 Score = 29.3 bits (64), Expect = 9.4 Identities = 33/142 (23%), Positives = 59/142 (41%), Gaps = 19/142 (13%) Query: 388 WEFPSVTWEPSEQLQRKALLQELQRWAGPLPATHLRHLGEVVHTFSHIKLTYQVYGLALE 447 WE+ + +Q + L ++QR GP + RH+ ++H T Q AL Sbjct: 19 WEWSPAGLQSYQQALLRISLDKVQRSLGPRAPSLRRHV--LIHN------TLQQLQAALR 70 Query: 448 GQTPVTTVPPGARWLTQEEFH-TAAVSTAMKKVFRVYQG----QQPGTCMGSKRSQVSSP 502 P +PP +L +E+F +A + + ++++ G Q P T +G + P Sbjct: 71 -LAPAPALPPEPLFLGEEDFSLSATIGSILRELDTSMDGTEPPQNPVTPLGLQNEVPPQP 129 Query: 503 C-----SRKKPRMGQQVLDNFF 519 + +G LD+FF Sbjct: 130 DPVFLEALSSRYLGDSGLDDFF 151 >gi|15718684 RPA-binding trans-activator [Homo sapiens] Length = 196 Score = 29.3 bits (64), Expect = 9.4 Identities = 33/142 (23%), Positives = 59/142 (41%), Gaps = 19/142 (13%) Query: 388 WEFPSVTWEPSEQLQRKALLQELQRWAGPLPATHLRHLGEVVHTFSHIKLTYQVYGLALE 447 WE+ + +Q + L ++QR GP + RH+ ++H T Q AL Sbjct: 19 WEWSPAGLQSYQQALLRISLDKVQRSLGPRAPSLRRHV--LIHN------TLQQLQAALR 70 Query: 448 GQTPVTTVPPGARWLTQEEFH-TAAVSTAMKKVFRVYQG----QQPGTCMGSKRSQVSSP 502 P +PP +L +E+F +A + + ++++ G Q P T +G + P Sbjct: 71 -LAPAPALPPEPLFLGEEDFSLSATIGSILRELDTSMDGTEPPQNPVTPLGLQNEVPPQP 129 Query: 503 C-----SRKKPRMGQQVLDNFF 519 + +G LD+FF Sbjct: 130 DPVFLEALSSRYLGDSGLDDFF 151 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.317 0.130 0.399 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 22,094,041 Number of Sequences: 37866 Number of extensions: 1028252 Number of successful extensions: 3004 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 23 Number of HSP's that attempted gapping in prelim test: 2985 Number of HSP's gapped (non-prelim): 38 length of query: 535 length of database: 18,247,518 effective HSP length: 107 effective length of query: 428 effective length of database: 14,195,856 effective search space: 6075826368 effective search space used: 6075826368 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.