Guide to the Human Genome
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Name: MUTYH Sequence: fasta or formatted (535aa) NCBI GI: 115298648
Description:

mutY homolog isoform 2

Referenced in:

DNases, Recombination, and DNA Repair

Other entries for this name:
alt prot [522aa] mutY homolog isoform 3
alt prot [521aa] mutY homolog isoform 4
alt prot [521aa] mutY homolog isoform 4
alt prot [549aa] mutY homolog isoform 5
alt prot [546aa] mutY homolog isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.9         53           2
 C cysteine            2.2         12           1
 D aspartate           3.0         16           1
 E glutamate           6.0         32           2
 F phenylalanine       2.1         11           2
 G glycine             7.3         39           2
 H histidine           2.2         12           1
 I isoleucine          1.5          8           1
 K lysine              3.2         17           2
 L leucine            10.3         55           2
 M methionine          1.9         10           1
 N asparagine          2.1         11           2
 P proline             6.4         34           2
 Q glutamine           8.6         46           2
 R arginine            7.9         42           3
 S serine              8.0         43           2
 T threonine           5.2         28           2
 V valine              7.9         42           2
 W tryptophan          2.4         13           1
 Y tyrosine            2.1         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mutY homolog isoform 2 
MUTYH                 0.992   mutY homolog isoform 1 
MUTYH                 0.991   mutY homolog isoform 5 
MUTYH                 0.975   mutY homolog isoform 4 
MUTYH                 0.975   mutY homolog isoform 4 
MUTYH                 0.970   mutY homolog isoform 3 
NTHL1                 0.021   nth endonuclease III-like 1 
NINL                  0.007   ninein-like 
MBTPS1                0.007   membrane-bound transcription factor site-1 protease p...
APOA4                 0.007   apolipoprotein A-IV precursor 
EPAS1                 0.006   endothelial PAS domain protein 1 
MYO9B                 0.006   myosin IXB isoform 2 
MYO9B                 0.006   myosin IXB isoform 1 
GPR162                0.006   G protein-coupled receptor 162 isoform 2 
SMTN                  0.005   smoothelin isoform b 
SMTN                  0.005   smoothelin isoform c 
SMTN                  0.005   smoothelin isoform a 
NCOA2                 0.005   nuclear receptor coactivator 2 
MNX1                  0.005   homeo box HB9 
FBXW4                 0.005   F-box and WD repeat domain containing 4 
SCUBE1                0.005   signal peptide, CUB domain, EGF-like 1 
LOC100292572          0.005   PREDICTED: hypothetical protein 
C3orf1                0.005   hypothetical protein LOC51300 
MUC12                 0.004   PREDICTED: mucin 12 
LOC100133714          0.004   PREDICTED: similar to Mucin-12, partial 
MUC12                 0.004   PREDICTED: mucin 12 
MUC12                 0.004   PREDICTED: mucin 12, cell surface associated 
NPHP3                 0.004   nephrocystin 3 
SERTAD3               0.004   RPA-binding trans-activator 
SERTAD3               0.004   RPA-binding trans-activator 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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