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Search of human proteins with 22027620
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|22027620 TNF receptor-associated factor 3 isoform 2 [Homo
sapiens]
(543 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|22027620 TNF receptor-associated factor 3 isoform 2 [Homo sap... 1110 0.0
gi|22027616 TNF receptor-associated factor 3 isoform 1 [Homo sap... 1096 0.0
gi|22027618 TNF receptor-associated factor 3 isoform 1 [Homo sap... 1096 0.0
gi|22027627 TNF receptor-associated factor 5 [Homo sapiens] 420 e-117
gi|77404348 TNF receptor-associated factor 5 [Homo sapiens] 420 e-117
gi|11321603 TNF receptor-associated factor 5 [Homo sapiens] 420 e-117
gi|22027612 TNF receptor-associated factor 2 [Homo sapiens] 275 1e-73
gi|5032193 TNF receptor-associated factor 1 [Homo sapiens] 212 8e-55
gi|22027630 TNF receptor-associated factor 6 [Homo sapiens] 172 9e-43
gi|4759254 TNF receptor-associated factor 6 [Homo sapiens] 172 9e-43
gi|22027622 TNF receptor-associated factor 4 [Homo sapiens] 128 1e-29
gi|57529737 PDZ domain containing ring finger 3 [Homo sapiens] 72 1e-12
gi|87241872 ring finger protein 151 [Homo sapiens] 71 3e-12
gi|150010558 myosin, heavy polypeptide 15 [Homo sapiens] 60 4e-09
gi|34577114 cytomatrix protein p110 [Homo sapiens] 54 3e-07
gi|239756241 PREDICTED: golgi autoantigen, golgin subfamily a-li... 52 1e-06
gi|37595555 ring finger protein 125 [Homo sapiens] 52 1e-06
gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-li... 51 3e-06
gi|38045898 RAB6-interacting protein 2 isoform epsilon [Homo sap... 48 3e-05
gi|38045896 RAB6-interacting protein 2 isoform delta [Homo sapiens] 48 3e-05
gi|45594312 TNF receptor-associated factor 7 [Homo sapiens] 48 3e-05
gi|19920317 cytoskeleton-associated protein 4 [Homo sapiens] 47 4e-05
gi|30520320 ring finger protein 166 [Homo sapiens] 47 4e-05
gi|62243484 sarcoma antigen NY-SAR-41 [Homo sapiens] 46 8e-05
gi|21361539 ring finger protein 138 isoform 1 [Homo sapiens] 46 1e-04
gi|124517695 ankyrin repeat domain 36B [Homo sapiens] 45 1e-04
gi|239741684 PREDICTED: ankyrin repeat domain 36 [Homo sapiens] 45 2e-04
gi|239745079 PREDICTED: Putative golgin subfamily A member 6-lik... 45 2e-04
gi|32189362 PTPRF interacting protein alpha 3 [Homo sapiens] 45 2e-04
gi|190194355 p90 autoantigen [Homo sapiens] 44 3e-04
>gi|22027620 TNF receptor-associated factor 3 isoform 2 [Homo
sapiens]
Length = 543
Score = 1110 bits (2870), Expect = 0.0
Identities = 543/543 (100%), Positives = 543/543 (100%)
Query: 1 MESSKKMDSPGALQTNPPLKLHTDRSAGTPVFVPEQGGYKEKFVKTVEDKYKCEKCHLVL 60
MESSKKMDSPGALQTNPPLKLHTDRSAGTPVFVPEQGGYKEKFVKTVEDKYKCEKCHLVL
Sbjct: 1 MESSKKMDSPGALQTNPPLKLHTDRSAGTPVFVPEQGGYKEKFVKTVEDKYKCEKCHLVL 60
Query: 61 CSPKQTECGHRFCESCMAALLSSSSPKCTACQESIVKDKVFKDNCCKREILALQIYCRNE 120
CSPKQTECGHRFCESCMAALLSSSSPKCTACQESIVKDKVFKDNCCKREILALQIYCRNE
Sbjct: 61 CSPKQTECGHRFCESCMAALLSSSSPKCTACQESIVKDKVFKDNCCKREILALQIYCRNE 120
Query: 121 SRGCAEQLMLGHLLVHLKNDCHFEELPCVRPDCKEKVLRKDLRDHVEKACKYREATCSHC 180
SRGCAEQLMLGHLLVHLKNDCHFEELPCVRPDCKEKVLRKDLRDHVEKACKYREATCSHC
Sbjct: 121 SRGCAEQLMLGHLLVHLKNDCHFEELPCVRPDCKEKVLRKDLRDHVEKACKYREATCSHC 180
Query: 181 KSQVPMIALQKHEDTDCPCVVVSCPHKCSVQTLLRSEGTNQQIKAHEASSAVQHVNLLKE 240
KSQVPMIALQKHEDTDCPCVVVSCPHKCSVQTLLRSEGTNQQIKAHEASSAVQHVNLLKE
Sbjct: 181 KSQVPMIALQKHEDTDCPCVVVSCPHKCSVQTLLRSEGTNQQIKAHEASSAVQHVNLLKE 240
Query: 241 WSNSLEKKVSLLQNESVEKNKSIQSLHNQICSFEIEIERQKEMLRNNESKILHLQRVIDS 300
WSNSLEKKVSLLQNESVEKNKSIQSLHNQICSFEIEIERQKEMLRNNESKILHLQRVIDS
Sbjct: 241 WSNSLEKKVSLLQNESVEKNKSIQSLHNQICSFEIEIERQKEMLRNNESKILHLQRVIDS 300
Query: 301 QAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNRVTELESVDKSAGQVARNTGLLESQL 360
QAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNRVTELESVDKSAGQVARNTGLLESQL
Sbjct: 301 QAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNRVTELESVDKSAGQVARNTGLLESQL 360
Query: 361 SRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPF 420
SRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPF
Sbjct: 361 SRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPF 420
Query: 421 YTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGSSR 480
YTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGSSR
Sbjct: 421 YTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGSSR 480
Query: 481 RHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQTVLENGTYIKDDTIFIKVIVDTSDL 540
RHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQTVLENGTYIKDDTIFIKVIVDTSDL
Sbjct: 481 RHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQTVLENGTYIKDDTIFIKVIVDTSDL 540
Query: 541 PDP 543
PDP
Sbjct: 541 PDP 543
>gi|22027616 TNF receptor-associated factor 3 isoform 1 [Homo
sapiens]
Length = 568
Score = 1096 bits (2834), Expect = 0.0
Identities = 543/568 (95%), Positives = 543/568 (95%), Gaps = 25/568 (4%)
Query: 1 MESSKKMDSPGALQTNPPLKLHTDRSAGTPVFVPEQGGYKEKFVKTVEDKYKCEKCHLVL 60
MESSKKMDSPGALQTNPPLKLHTDRSAGTPVFVPEQGGYKEKFVKTVEDKYKCEKCHLVL
Sbjct: 1 MESSKKMDSPGALQTNPPLKLHTDRSAGTPVFVPEQGGYKEKFVKTVEDKYKCEKCHLVL 60
Query: 61 CSPKQTECGHRFCESCMAALLSSSSPKCTACQESIVKDKVFKDNCCKREILALQIYCRNE 120
CSPKQTECGHRFCESCMAALLSSSSPKCTACQESIVKDKVFKDNCCKREILALQIYCRNE
Sbjct: 61 CSPKQTECGHRFCESCMAALLSSSSPKCTACQESIVKDKVFKDNCCKREILALQIYCRNE 120
Query: 121 SRGCAEQLMLGHLLVHLKNDCHFEELPCVRPDCKEKVLRKDLRDHVEKACKYREATCSHC 180
SRGCAEQLMLGHLLVHLKNDCHFEELPCVRPDCKEKVLRKDLRDHVEKACKYREATCSHC
Sbjct: 121 SRGCAEQLMLGHLLVHLKNDCHFEELPCVRPDCKEKVLRKDLRDHVEKACKYREATCSHC 180
Query: 181 KSQVPMIALQKHEDTDCPCVVVSCPHKCSVQTLLRSE----------------------- 217
KSQVPMIALQKHEDTDCPCVVVSCPHKCSVQTLLRSE
Sbjct: 181 KSQVPMIALQKHEDTDCPCVVVSCPHKCSVQTLLRSELSAHLSECVNAPSTCSFKRYGCV 240
Query: 218 --GTNQQIKAHEASSAVQHVNLLKEWSNSLEKKVSLLQNESVEKNKSIQSLHNQICSFEI 275
GTNQQIKAHEASSAVQHVNLLKEWSNSLEKKVSLLQNESVEKNKSIQSLHNQICSFEI
Sbjct: 241 FQGTNQQIKAHEASSAVQHVNLLKEWSNSLEKKVSLLQNESVEKNKSIQSLHNQICSFEI 300
Query: 276 EIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNR 335
EIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNR
Sbjct: 301 EIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNR 360
Query: 336 VTELESVDKSAGQVARNTGLLESQLSRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIW 395
VTELESVDKSAGQVARNTGLLESQLSRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIW
Sbjct: 361 VTELESVDKSAGQVARNTGLLESQLSRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIW 420
Query: 396 KIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRG 455
KIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRG
Sbjct: 421 KIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRG 480
Query: 456 EYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQ 515
EYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQ
Sbjct: 481 EYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQ 540
Query: 516 TVLENGTYIKDDTIFIKVIVDTSDLPDP 543
TVLENGTYIKDDTIFIKVIVDTSDLPDP
Sbjct: 541 TVLENGTYIKDDTIFIKVIVDTSDLPDP 568
>gi|22027618 TNF receptor-associated factor 3 isoform 1 [Homo
sapiens]
Length = 568
Score = 1096 bits (2834), Expect = 0.0
Identities = 543/568 (95%), Positives = 543/568 (95%), Gaps = 25/568 (4%)
Query: 1 MESSKKMDSPGALQTNPPLKLHTDRSAGTPVFVPEQGGYKEKFVKTVEDKYKCEKCHLVL 60
MESSKKMDSPGALQTNPPLKLHTDRSAGTPVFVPEQGGYKEKFVKTVEDKYKCEKCHLVL
Sbjct: 1 MESSKKMDSPGALQTNPPLKLHTDRSAGTPVFVPEQGGYKEKFVKTVEDKYKCEKCHLVL 60
Query: 61 CSPKQTECGHRFCESCMAALLSSSSPKCTACQESIVKDKVFKDNCCKREILALQIYCRNE 120
CSPKQTECGHRFCESCMAALLSSSSPKCTACQESIVKDKVFKDNCCKREILALQIYCRNE
Sbjct: 61 CSPKQTECGHRFCESCMAALLSSSSPKCTACQESIVKDKVFKDNCCKREILALQIYCRNE 120
Query: 121 SRGCAEQLMLGHLLVHLKNDCHFEELPCVRPDCKEKVLRKDLRDHVEKACKYREATCSHC 180
SRGCAEQLMLGHLLVHLKNDCHFEELPCVRPDCKEKVLRKDLRDHVEKACKYREATCSHC
Sbjct: 121 SRGCAEQLMLGHLLVHLKNDCHFEELPCVRPDCKEKVLRKDLRDHVEKACKYREATCSHC 180
Query: 181 KSQVPMIALQKHEDTDCPCVVVSCPHKCSVQTLLRSE----------------------- 217
KSQVPMIALQKHEDTDCPCVVVSCPHKCSVQTLLRSE
Sbjct: 181 KSQVPMIALQKHEDTDCPCVVVSCPHKCSVQTLLRSELSAHLSECVNAPSTCSFKRYGCV 240
Query: 218 --GTNQQIKAHEASSAVQHVNLLKEWSNSLEKKVSLLQNESVEKNKSIQSLHNQICSFEI 275
GTNQQIKAHEASSAVQHVNLLKEWSNSLEKKVSLLQNESVEKNKSIQSLHNQICSFEI
Sbjct: 241 FQGTNQQIKAHEASSAVQHVNLLKEWSNSLEKKVSLLQNESVEKNKSIQSLHNQICSFEI 300
Query: 276 EIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNR 335
EIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNR
Sbjct: 301 EIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNR 360
Query: 336 VTELESVDKSAGQVARNTGLLESQLSRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIW 395
VTELESVDKSAGQVARNTGLLESQLSRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIW
Sbjct: 361 VTELESVDKSAGQVARNTGLLESQLSRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIW 420
Query: 396 KIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRG 455
KIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRG
Sbjct: 421 KIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRG 480
Query: 456 EYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQ 515
EYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQ
Sbjct: 481 EYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQ 540
Query: 516 TVLENGTYIKDDTIFIKVIVDTSDLPDP 543
TVLENGTYIKDDTIFIKVIVDTSDLPDP
Sbjct: 541 TVLENGTYIKDDTIFIKVIVDTSDLPDP 568
>gi|22027627 TNF receptor-associated factor 5 [Homo sapiens]
Length = 557
Score = 420 bits (1080), Expect = e-117
Identities = 222/552 (40%), Positives = 342/552 (61%), Gaps = 46/552 (8%)
Query: 25 RSAGTPVFVPEQGGYKEKFVKTVEDKYKCEKCHLVLCSPKQTECGHRFCESCMAALLSSS 84
+++G + + + + +FV+ +E++YKC CH VL +P QT CGHRFC+ C+ +L +
Sbjct: 17 QNSGNSISLDFEPSIEYQFVERLEERYKCAFCHSVLHNPHQTGCGHRFCQHCILSLRELN 76
Query: 85 S-PKCTACQESIVKDKVFKDNCCKREILALQIYCRNESRGCAEQLMLGHLLVHLKNDCHF 143
+ P C +E I +VFKDNCCKRE+L L +YC N + GC +++LG HL+ C F
Sbjct: 77 TVPICPVDKEVIKSQEVFKDNCCKREVLNLYVYCSN-APGCNAKVILGRYQDHLQQ-CLF 134
Query: 144 EELPCVRPDCKEKVLRKDLRDHVEKACKYREATCSHCKSQVPMIALQKHEDTDCPCVVVS 203
+ + C C+E VLRKDL++H+ +C++R+ C +CK V +I LQ HE+ CP V
Sbjct: 135 QPVQCSNEKCREPVLRKDLKEHLSASCQFRKEKCLYCKKDVVVINLQNHEENLCPEYPVF 194
Query: 204 CPHKCSVQTLLRSE-------------------------GTNQQIKAHEASSAVQHVNLL 238
CP+ C+ + +L++E + ++ HE S+ +H+ L+
Sbjct: 195 CPNNCA-KIILKTEVDEHLAVCPEAEQDCPFKHYGCAVTDKRRNLQQHEHSALREHMRLV 253
Query: 239 KEWSNSLEKKVSLLQNESVEKNKSIQSLHNQICSFEIEIERQKEMLRNNESKILHLQRVI 298
E + LE+++S L +K IQ L I E E ++ ++ N S + ++Q V
Sbjct: 254 LEKNVQLEEQISDLHKSLEQKESKIQQLAETIKKLEKEFKQFAQLFGKNGSFLPNIQ-VF 312
Query: 299 DSQAEKLKELDKEIRPF------RQNWEEADSMKSSVESLQNRVTELESVDKSAGQVARN 352
S +K L+ ++ +QN + + +V++++ ++T LE+ D+
Sbjct: 313 ASHIDKSAWLEAQVHQLLQMVNQQQNKFDLRPLMEAVDTVKQKITLLENNDQ-------R 365
Query: 353 TGLLESQLSRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIWKIRDYKRRKQEAVMGKT 412
+LE + ++HD +++H +L+ + RF++LE YNG LIWK+ DYK +K+EAV G T
Sbjct: 366 LAVLEEETNKHDTHINIHKAQLSKNEERFKLLEGTCYNGKLIWKVTDYKMKKREAVDGHT 425
Query: 413 LSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLM 472
+S++SQ FYT GY++CAR YLNGDG G+G+HLSL+FV+MRGE+D+LL WPF+Q+VTLM
Sbjct: 426 VSIFSQSFYTSRCGYRLCARAYLNGDGSGRGSHLSLYFVVMRGEFDSLLQWPFRQRVTLM 485
Query: 473 LMDQGSSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQTVLEN--GTYIKDDTIF 530
L+DQ S ++++ + FKPDPNSSSFK+P GEMNIASGCP FVA +VLEN YIKDDT+F
Sbjct: 486 LLDQ-SGKKNIMETFKPDPNSSSFKRPDGEMNIASGCPRFVAHSVLENAKNAYIKDDTLF 544
Query: 531 IKVIVDTSDLPD 542
+KV VD +DL D
Sbjct: 545 LKVAVDLTDLED 556
>gi|77404348 TNF receptor-associated factor 5 [Homo sapiens]
Length = 557
Score = 420 bits (1080), Expect = e-117
Identities = 222/552 (40%), Positives = 342/552 (61%), Gaps = 46/552 (8%)
Query: 25 RSAGTPVFVPEQGGYKEKFVKTVEDKYKCEKCHLVLCSPKQTECGHRFCESCMAALLSSS 84
+++G + + + + +FV+ +E++YKC CH VL +P QT CGHRFC+ C+ +L +
Sbjct: 17 QNSGNSISLDFEPSIEYQFVERLEERYKCAFCHSVLHNPHQTGCGHRFCQHCILSLRELN 76
Query: 85 S-PKCTACQESIVKDKVFKDNCCKREILALQIYCRNESRGCAEQLMLGHLLVHLKNDCHF 143
+ P C +E I +VFKDNCCKRE+L L +YC N + GC +++LG HL+ C F
Sbjct: 77 TVPICPVDKEVIKSQEVFKDNCCKREVLNLYVYCSN-APGCNAKVILGRYQDHLQQ-CLF 134
Query: 144 EELPCVRPDCKEKVLRKDLRDHVEKACKYREATCSHCKSQVPMIALQKHEDTDCPCVVVS 203
+ + C C+E VLRKDL++H+ +C++R+ C +CK V +I LQ HE+ CP V
Sbjct: 135 QPVQCSNEKCREPVLRKDLKEHLSASCQFRKEKCLYCKKDVVVINLQNHEENLCPEYPVF 194
Query: 204 CPHKCSVQTLLRSE-------------------------GTNQQIKAHEASSAVQHVNLL 238
CP+ C+ + +L++E + ++ HE S+ +H+ L+
Sbjct: 195 CPNNCA-KIILKTEVDEHLAVCPEAEQDCPFKHYGCAVTDKRRNLQQHEHSALREHMRLV 253
Query: 239 KEWSNSLEKKVSLLQNESVEKNKSIQSLHNQICSFEIEIERQKEMLRNNESKILHLQRVI 298
E + LE+++S L +K IQ L I E E ++ ++ N S + ++Q V
Sbjct: 254 LEKNVQLEEQISDLHKSLEQKESKIQQLAETIKKLEKEFKQFAQLFGKNGSFLPNIQ-VF 312
Query: 299 DSQAEKLKELDKEIRPF------RQNWEEADSMKSSVESLQNRVTELESVDKSAGQVARN 352
S +K L+ ++ +QN + + +V++++ ++T LE+ D+
Sbjct: 313 ASHIDKSAWLEAQVHQLLQMVNQQQNKFDLRPLMEAVDTVKQKITLLENNDQ-------R 365
Query: 353 TGLLESQLSRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIWKIRDYKRRKQEAVMGKT 412
+LE + ++HD +++H +L+ + RF++LE YNG LIWK+ DYK +K+EAV G T
Sbjct: 366 LAVLEEETNKHDTHINIHKAQLSKNEERFKLLEGTCYNGKLIWKVTDYKMKKREAVDGHT 425
Query: 413 LSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLM 472
+S++SQ FYT GY++CAR YLNGDG G+G+HLSL+FV+MRGE+D+LL WPF+Q+VTLM
Sbjct: 426 VSIFSQSFYTSRCGYRLCARAYLNGDGSGRGSHLSLYFVVMRGEFDSLLQWPFRQRVTLM 485
Query: 473 LMDQGSSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQTVLEN--GTYIKDDTIF 530
L+DQ S ++++ + FKPDPNSSSFK+P GEMNIASGCP FVA +VLEN YIKDDT+F
Sbjct: 486 LLDQ-SGKKNIMETFKPDPNSSSFKRPDGEMNIASGCPRFVAHSVLENAKNAYIKDDTLF 544
Query: 531 IKVIVDTSDLPD 542
+KV VD +DL D
Sbjct: 545 LKVAVDLTDLED 556
>gi|11321603 TNF receptor-associated factor 5 [Homo sapiens]
Length = 557
Score = 420 bits (1080), Expect = e-117
Identities = 222/552 (40%), Positives = 342/552 (61%), Gaps = 46/552 (8%)
Query: 25 RSAGTPVFVPEQGGYKEKFVKTVEDKYKCEKCHLVLCSPKQTECGHRFCESCMAALLSSS 84
+++G + + + + +FV+ +E++YKC CH VL +P QT CGHRFC+ C+ +L +
Sbjct: 17 QNSGNSISLDFEPSIEYQFVERLEERYKCAFCHSVLHNPHQTGCGHRFCQHCILSLRELN 76
Query: 85 S-PKCTACQESIVKDKVFKDNCCKREILALQIYCRNESRGCAEQLMLGHLLVHLKNDCHF 143
+ P C +E I +VFKDNCCKRE+L L +YC N + GC +++LG HL+ C F
Sbjct: 77 TVPICPVDKEVIKSQEVFKDNCCKREVLNLYVYCSN-APGCNAKVILGRYQDHLQQ-CLF 134
Query: 144 EELPCVRPDCKEKVLRKDLRDHVEKACKYREATCSHCKSQVPMIALQKHEDTDCPCVVVS 203
+ + C C+E VLRKDL++H+ +C++R+ C +CK V +I LQ HE+ CP V
Sbjct: 135 QPVQCSNEKCREPVLRKDLKEHLSASCQFRKEKCLYCKKDVVVINLQNHEENLCPEYPVF 194
Query: 204 CPHKCSVQTLLRSE-------------------------GTNQQIKAHEASSAVQHVNLL 238
CP+ C+ + +L++E + ++ HE S+ +H+ L+
Sbjct: 195 CPNNCA-KIILKTEVDEHLAVCPEAEQDCPFKHYGCAVTDKRRNLQQHEHSALREHMRLV 253
Query: 239 KEWSNSLEKKVSLLQNESVEKNKSIQSLHNQICSFEIEIERQKEMLRNNESKILHLQRVI 298
E + LE+++S L +K IQ L I E E ++ ++ N S + ++Q V
Sbjct: 254 LEKNVQLEEQISDLHKSLEQKESKIQQLAETIKKLEKEFKQFAQLFGKNGSFLPNIQ-VF 312
Query: 299 DSQAEKLKELDKEIRPF------RQNWEEADSMKSSVESLQNRVTELESVDKSAGQVARN 352
S +K L+ ++ +QN + + +V++++ ++T LE+ D+
Sbjct: 313 ASHIDKSAWLEAQVHQLLQMVNQQQNKFDLRPLMEAVDTVKQKITLLENNDQ-------R 365
Query: 353 TGLLESQLSRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIWKIRDYKRRKQEAVMGKT 412
+LE + ++HD +++H +L+ + RF++LE YNG LIWK+ DYK +K+EAV G T
Sbjct: 366 LAVLEEETNKHDTHINIHKAQLSKNEERFKLLEGTCYNGKLIWKVTDYKMKKREAVDGHT 425
Query: 413 LSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLM 472
+S++SQ FYT GY++CAR YLNGDG G+G+HLSL+FV+MRGE+D+LL WPF+Q+VTLM
Sbjct: 426 VSIFSQSFYTSRCGYRLCARAYLNGDGSGRGSHLSLYFVVMRGEFDSLLQWPFRQRVTLM 485
Query: 473 LMDQGSSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQTVLEN--GTYIKDDTIF 530
L+DQ S ++++ + FKPDPNSSSFK+P GEMNIASGCP FVA +VLEN YIKDDT+F
Sbjct: 486 LLDQ-SGKKNIMETFKPDPNSSSFKRPDGEMNIASGCPRFVAHSVLENAKNAYIKDDTLF 544
Query: 531 IKVIVDTSDLPD 542
+KV VD +DL D
Sbjct: 545 LKVAVDLTDLED 556
>gi|22027612 TNF receptor-associated factor 2 [Homo sapiens]
Length = 501
Score = 275 bits (702), Expect = 1e-73
Identities = 179/526 (34%), Positives = 277/526 (52%), Gaps = 61/526 (11%)
Query: 36 QGGYKEKFVKT-VEDKYKCEKCHLVLCSPKQTECGHRFCESCMAALLSSSSPKCTAC-QE 93
Q G+ + + T +E KY C C VL P Q +CGHR+C C+A++LSS C AC E
Sbjct: 16 QPGFSKTLLGTKLEAKYLCSACRNVLRRPFQAQCGHRYCSFCLASILSSGPQNCAACVHE 75
Query: 94 SIVKDKV--------FKDNCCKREILALQIYCRNESRGCAEQLMLGHLLVHLKNDCHFEE 145
I ++ + F DN +RE+ +L C ++ GC + L CH
Sbjct: 76 GIYEEGISILESSSAFPDNAARREVESLPAVCPSD--GCTWKGTLKEY-----ESCHEGR 128
Query: 146 LPCVR---PDCKEKVLRKDLRDHVEKACKYREATCSHCKSQVPMIALQKHEDTDCPCVVV 202
P + P CK V + H+E C R +C HC++ ++ H + CP +
Sbjct: 129 CPLMLTECPACKGLVRLGEKERHLEHECPERSLSCRHCRAPCCGADVKAHHEV-CPKFPL 187
Query: 203 SCPHKCSVQTLLRSEGTNQQIKAHEASSAVQHVNLLKEWSNSLEKKVSLLQNESVEKNKS 262
+C C + + R ++ + H + V LE +VE K
Sbjct: 188 TCDG-CGKKKIPR-----EKFQDHVKTCGKCRVPCRFHAIGCLE---------TVEGEKQ 232
Query: 263 IQSLHNQICSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEA 322
E E++ +E L S +L + ++ Q+ EL + ++ E+
Sbjct: 233 Q----------EHEVQWLREHLAMLLSSVLEAKPLLGDQSHAGSELLQRC----ESLEKK 278
Query: 323 DSMKSSVESLQNRVTELESVDKSAGQVARNTGL-------LESQLSRHDQMLSVHDIRLA 375
+ ++ + NR E+E V +A +R L L S++ + ++ + + D+ +A
Sbjct: 279 TATFENIVCVLNR--EVERVAMTAEACSRQHRLDQDKIEALSSKVQQLERSIGLKDLAMA 336
Query: 376 DMDLRFQVLETASYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYL 435
D++ + +E ++Y+GV IWKI D+ R++QEAV G+ +++S FYT +GYKMC R+YL
Sbjct: 337 DLEQKVLEMEASTYDGVFIWKISDFARKRQEAVAGRIPAIFSPAFYTSRYGYKMCLRIYL 396
Query: 436 NGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSS 495
NGDG G+GTHLSLFFV+M+G DALL WPF QKVTLML+DQ ++R H+ DAF+PD SSS
Sbjct: 397 NGDGTGRGTHLSLFFVVMKGPNDALLRWPFNQKVTLMLLDQ-NNREHVIDAFRPDVTSSS 455
Query: 496 FKKPTGEMNIASGCPVFVAQTVLE-NGTYIKDDTIFIKVIVDTSDL 540
F++P +MNIASGCP+F + +E +Y++DD IFIK IVD + L
Sbjct: 456 FQRPVNDMNIASGCPLFCPVSKMEAKNSYVRDDAIFIKAIVDLTGL 501
>gi|5032193 TNF receptor-associated factor 1 [Homo sapiens]
Length = 416
Score = 212 bits (539), Expect = 8e-55
Identities = 134/365 (36%), Positives = 196/365 (53%), Gaps = 60/365 (16%)
Query: 197 CPCVVVSCPHKCSVQTLLRSEGTNQQIKAHEASSAVQHVNLL----KEWSNSL-----EK 247
CP V C K G+ Q ++ HE +S H+NLL K+W L
Sbjct: 88 CPFAGVGCSFK----------GSPQSVQEHEVTSQTSHLNLLLGFMKQWKARLGCGLESG 137
Query: 248 KVSLLQNESVEKNKSIQSLHNQICSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKLKE 307
++L QN S + +Q+ E++ R E + H + + L E
Sbjct: 138 PMALEQNLS---DLQLQAAVEVAGDLEVDCYRAPCSESQEELALQHFMK-----EKLLAE 189
Query: 308 LDKEIRPFRQNWEEADSMKSSVESLQNRVTELESVDKSAGQVARNTGLLESQLSRH---- 363
L+ ++R F ++ ++ N+ E A +A T + +SQL R
Sbjct: 190 LEGKLRVFE-----------NIVAVLNKEVE-------ASHLALATSIHQSQLDRERILS 231
Query: 364 --------DQMLSVHDIRLADMDLRFQVLETASYNGVLIWKIRDYKRRKQEAVMGKTLSL 415
Q L+ D L ++ +++E AS++G +WKI + RR E+ G+T+SL
Sbjct: 232 LEQRVVELQQTLAQKDQALGKLEQSLRLMEEASFDGTFLWKITNVTRRCHESACGRTVSL 291
Query: 416 YSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMD 475
+S FYT +GYK+C R+YLNGDG GK THLSLF VIMRGEYDALLPWPF+ KVT ML+D
Sbjct: 292 FSPAFYTAKYGYKLCLRLYLNGDGTGKRTHLSLFIVIMRGEYDALLPWPFRNKVTFMLLD 351
Query: 476 QGSSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQTVLEN--GTYIKDDTIFIKV 533
Q ++R H DAF+PD +S+SF++P E N+ASGCP+F + L++ Y+KDDT+F+K
Sbjct: 352 Q-NNREHAIDAFRPDLSSASFQRPQSETNVASGCPLFFPLSKLQSPKHAYVKDDTMFLKC 410
Query: 534 IVDTS 538
IV+TS
Sbjct: 411 IVETS 415
>gi|22027630 TNF receptor-associated factor 6 [Homo sapiens]
Length = 522
Score = 172 bits (435), Expect = 9e-43
Identities = 136/515 (26%), Positives = 229/515 (44%), Gaps = 71/515 (13%)
Query: 32 FVPEQGGYKEKFVKTVEDKYKCEKCHLVLCSPKQTECGHRFCESCMAALLSSSSPKCTAC 91
F+ E GY +F +E KY+C C + L QT CGHRFC++C+ + + KC
Sbjct: 49 FMEEIQGYDVEFDPPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVD 108
Query: 92 QESIVKDKVFKDNCCKREILALQIYCRNESRGCAEQLMLGHLLVHLKNDCHFEELPCVRP 151
E ++++++F DN KREIL+L + C NE GC ++ L HL H + C F + C P
Sbjct: 109 NEILLENQLFPDNFAKREILSLMVKCPNE--GCLHKMELRHLEDHQAH-CEFALMDC--P 163
Query: 152 DCKEKVLRKDLRDHVEKACKYREATCSHCKSQVPMIALQKHEDTDCPCVVVSCPHKCSVQ 211
C+ + + H+ K C R+ +C +C + + + H D +CP V C
Sbjct: 164 QCQRPFQKFHINIHILKDCPRRQVSCDNCAASMAFEDKEIH-DQNCPLANVIC------- 215
Query: 212 TLLRSEGTNQQIKAHEASSAVQHVNLLKEWSNSLEKKVSLLQNESVEKNKSIQSLHNQI- 270
E+ N++ L E + + + I
Sbjct: 216 ----------------------------EYCNTI------LIREQMPNHYDLDCPTAPIP 241
Query: 271 CSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKLKEL--DKEIRPFRQNWEEADSMKSS 328
C+F ++M RN+ ++ HLQ S L + + P E + + +
Sbjct: 242 CTFST-FGCHEKMQRNHLAR--HLQENTQSHMRMLAQAVHSLSVIPDSGYISEVRNFQET 298
Query: 329 VESLQNRVTELESVDKSAGQVARNTGLLESQLSRHDQMLSVHDIRLADMDLRFQV--LET 386
+ L+ R+ + Q+ T +E+Q + V +++ L +V +E
Sbjct: 299 IHQLEGRLVRQDH------QIRELTAKMETQ------SMYVSELKRTIRTLEDKVAEIEA 346
Query: 387 ASYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLN-GDGMGKGTH 445
NG+ IWKI ++ + K + ++S FYTG GYK+C R++L +
Sbjct: 347 QQCNGIYIWKIGNFGMHLKCQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPTAQRCANY 406
Query: 446 LSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGSS--RRHLGDAFKPDPNSSSFKKPTGEM 503
+SLF M+GEYD+ LPWPF+ + L ++DQ + R++ + P +F++PT
Sbjct: 407 ISLFVHTMQGEYDSHLPWPFQGTIRLTILDQSEAPVRQNHEEIMDAKPELLAFQRPTIPR 466
Query: 504 NIAS-GCPVFVAQTVLENGTYIKDDTIFIKVIVDT 537
N G F+ L T+IKDDT+ ++ V T
Sbjct: 467 NPKGFGYVTFMHLEALRQRTFIKDDTLLVRCEVST 501
>gi|4759254 TNF receptor-associated factor 6 [Homo sapiens]
Length = 522
Score = 172 bits (435), Expect = 9e-43
Identities = 136/515 (26%), Positives = 229/515 (44%), Gaps = 71/515 (13%)
Query: 32 FVPEQGGYKEKFVKTVEDKYKCEKCHLVLCSPKQTECGHRFCESCMAALLSSSSPKCTAC 91
F+ E GY +F +E KY+C C + L QT CGHRFC++C+ + + KC
Sbjct: 49 FMEEIQGYDVEFDPPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVD 108
Query: 92 QESIVKDKVFKDNCCKREILALQIYCRNESRGCAEQLMLGHLLVHLKNDCHFEELPCVRP 151
E ++++++F DN KREIL+L + C NE GC ++ L HL H + C F + C P
Sbjct: 109 NEILLENQLFPDNFAKREILSLMVKCPNE--GCLHKMELRHLEDHQAH-CEFALMDC--P 163
Query: 152 DCKEKVLRKDLRDHVEKACKYREATCSHCKSQVPMIALQKHEDTDCPCVVVSCPHKCSVQ 211
C+ + + H+ K C R+ +C +C + + + H D +CP V C
Sbjct: 164 QCQRPFQKFHINIHILKDCPRRQVSCDNCAASMAFEDKEIH-DQNCPLANVIC------- 215
Query: 212 TLLRSEGTNQQIKAHEASSAVQHVNLLKEWSNSLEKKVSLLQNESVEKNKSIQSLHNQI- 270
E+ N++ L E + + + I
Sbjct: 216 ----------------------------EYCNTI------LIREQMPNHYDLDCPTAPIP 241
Query: 271 CSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKLKEL--DKEIRPFRQNWEEADSMKSS 328
C+F ++M RN+ ++ HLQ S L + + P E + + +
Sbjct: 242 CTFST-FGCHEKMQRNHLAR--HLQENTQSHMRMLAQAVHSLSVIPDSGYISEVRNFQET 298
Query: 329 VESLQNRVTELESVDKSAGQVARNTGLLESQLSRHDQMLSVHDIRLADMDLRFQV--LET 386
+ L+ R+ + Q+ T +E+Q + V +++ L +V +E
Sbjct: 299 IHQLEGRLVRQDH------QIRELTAKMETQ------SMYVSELKRTIRTLEDKVAEIEA 346
Query: 387 ASYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLN-GDGMGKGTH 445
NG+ IWKI ++ + K + ++S FYTG GYK+C R++L +
Sbjct: 347 QQCNGIYIWKIGNFGMHLKCQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPTAQRCANY 406
Query: 446 LSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGSS--RRHLGDAFKPDPNSSSFKKPTGEM 503
+SLF M+GEYD+ LPWPF+ + L ++DQ + R++ + P +F++PT
Sbjct: 407 ISLFVHTMQGEYDSHLPWPFQGTIRLTILDQSEAPVRQNHEEIMDAKPELLAFQRPTIPR 466
Query: 504 NIAS-GCPVFVAQTVLENGTYIKDDTIFIKVIVDT 537
N G F+ L T+IKDDT+ ++ V T
Sbjct: 467 NPKGFGYVTFMHLEALRQRTFIKDDTLLVRCEVST 501
>gi|22027622 TNF receptor-associated factor 4 [Homo sapiens]
Length = 470
Score = 128 bits (322), Expect = 1e-29
Identities = 63/157 (40%), Positives = 93/157 (59%), Gaps = 10/157 (6%)
Query: 390 NGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLF 449
+GVLIWKI Y RR QEA L +S FYT +GYK+ +LNG+G G+GTHLSL+
Sbjct: 307 DGVLIWKIGSYGRRLQEAKAKPNLECFSPAFYTHKYGYKLQVSAFLNGNGSGEGTHLSLY 366
Query: 450 FVIMRGEYDALLPWPFKQKVTLMLMDQG----SSRRHLGDAFKPDPNSSSFKKP------ 499
++ G +D LL WPF ++VT L+DQ + +H+ + F PDPN +F+KP
Sbjct: 367 IRVLPGAFDNLLEWPFARRVTFSLLDQSDPGLAKPQHVTETFHPDPNWKNFQKPGTWRGS 426
Query: 500 TGEMNIASGCPVFVAQTVLENGTYIKDDTIFIKVIVD 536
E ++ G P F++ + Y++DD +FI+ V+
Sbjct: 427 LDESSLGFGYPKFISHQDIRKRNYVRDDAVFIRAAVE 463
Score = 94.0 bits (232), Expect = 3e-19
Identities = 57/179 (31%), Positives = 82/179 (45%), Gaps = 4/179 (2%)
Query: 38 GYKEKFVKTVEDKYKCEKCHLVLCSPKQTE-CGHRFCESCMAALLSSSSPKCTACQESIV 96
G+ KF++ + + C C + P Q CGHRFC++C+ LS KC Q +
Sbjct: 3 GFDYKFLEKPKRRLLCPLCGKPMREPVQVSTCGHRFCDTCLQEFLSEGVFKCPEDQLPLD 62
Query: 97 KDKVFKDNCCKREILALQIYCRNESRGCAEQLMLGHLLVHLKNDCHFEELPCVRPDCKEK 156
K++ D + ++L L I C + GC L HL HL N C F +PC C K
Sbjct: 63 YAKIYPDPELEVQVLGLPIRCIHSEEGCRWSGPLRHLQGHL-NTCSFNVIPCPN-RCPMK 120
Query: 157 VLRKDLRDHVEKACKYREATCSHCKSQVPMIALQKHEDTDCPCVVVSCPHKCSVQTLLR 215
+ R+DL H++ C R C C A + HE CP V C +KC + + R
Sbjct: 121 LSRRDLPAHLQHDCPKRRLKCEFCGCDFSGEAYESHEGM-CPQESVYCENKCGARMMRR 178
>gi|57529737 PDZ domain containing ring finger 3 [Homo sapiens]
Length = 1066
Score = 72.0 bits (175), Expect = 1e-12
Identities = 42/133 (31%), Positives = 59/133 (44%), Gaps = 1/133 (0%)
Query: 41 EKFVKTVEDKYKCEKCHLVLCSPKQTECGHRFCESCMAALLSSSSPKCTACQESIVKDKV 100
++F V+ KC CH VL P T CGH FC C+ + C+ + ++
Sbjct: 6 DRFDGDVDPDLKCALCHKVLEDPLTTPCGHVFCAGCVLPWVVQEGSCPARCRGRLSAKEL 65
Query: 101 FKDNCCKREILALQIYCRNESRGCAEQLMLGHLLVHLKNDCHFEELPCVRPDCKEKVLRK 160
KR IL L I C +RGC + L L HL+ C F C C + +LR+
Sbjct: 66 NHVLPLKRLILKLDIKCAYATRGCGRVVKLQQLPEHLER-CDFAPARCRHAGCGQVLLRR 124
Query: 161 DLRDHVEKACKYR 173
D+ H+ AC R
Sbjct: 125 DVEAHMRDACDAR 137
>gi|87241872 ring finger protein 151 [Homo sapiens]
Length = 245
Score = 70.9 bits (172), Expect = 3e-12
Identities = 40/142 (28%), Positives = 62/142 (43%), Gaps = 3/142 (2%)
Query: 37 GGYK-EKFVKTVEDKYKCEKCHLVLCSPKQTECGHRFCESCMAALLSSSSPKCTACQESI 95
GGY F + + C CH VL P + C H FC+ C+ L+ C C++ +
Sbjct: 3 GGYDLNLFASPPDSNFVCSVCHGVLKRPARLPCSHIFCKKCILRWLARQK-TCPCCRKEV 61
Query: 96 VKDKVFKDNCCKREILALQIYCRNESRGCAEQLMLGHLLVHLKNDCHFEELPCVRPDCKE 155
+ KV N ++ I L++ C+N GC L H H ++ C FE C C
Sbjct: 62 KRKKVVHMNKLRKTIGRLEVKCKNADAGCIVTCPLAHRKGH-QDSCPFELTACPNEGCTS 120
Query: 156 KVLRKDLRDHVEKACKYREATC 177
+V R L +H + + + C
Sbjct: 121 QVPRGTLAEHRQHCQQGSQQRC 142
>gi|150010558 myosin, heavy polypeptide 15 [Homo sapiens]
Length = 1946
Score = 60.5 bits (145), Expect = 4e-09
Identities = 58/248 (23%), Positives = 110/248 (44%), Gaps = 26/248 (10%)
Query: 190 QKHEDTDCPCVVVSCPHKCSVQTLLRSEGTNQQIKAHEASSAVQHVNLLKEWSNSLEKKV 249
QKHE++ + LL+ + T ++ + + ++ NL +E SN L +V
Sbjct: 1470 QKHEESQALLDASQKEVQALSTELLKLKNTYEESIVGQETLRRENKNLQEEISN-LTNQV 1528
Query: 250 SLLQNESVEKNKSIQSLHNQICSFEIEIERQKEMLRNNESKILHLQ-RVIDSQAE---KL 305
E K + + + ++ +E + L NESKILH Q +++++AE KL
Sbjct: 1529 REGTKNLTEMEKVKKLIEEEKTEVQVTLEETEGALERNESKILHFQLELLEAKAELERKL 1588
Query: 306 KELDKEIRPFRQNWE-EADSMKSSVES------------------LQNRVTELESVDKSA 346
E D+EI FR+ + DS++SS++S L +L ++
Sbjct: 1589 SEKDEEIENFRRKQQCTIDSLQSSLDSEAKSRIEVTRLKKKMEEDLNEMELQLSCANRQV 1648
Query: 347 GQVARNTGLLESQLSRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIWKIRDYKRRKQE 406
+ ++ G L+ Q+ D + + D + DL+ QV N +L ++ D + +++
Sbjct: 1649 SEATKSLGQLQIQIK--DLQMQLDDSTQLNSDLKEQVAVAERRNSLLQSELEDLRSLQEQ 1706
Query: 407 AVMGKTLS 414
G+ LS
Sbjct: 1707 TERGRRLS 1714
Score = 41.6 bits (96), Expect = 0.002
Identities = 34/155 (21%), Positives = 68/155 (43%), Gaps = 21/155 (13%)
Query: 210 VQTLLRSEGTNQQIKAHEASSAVQHVNLLKEWSNSL-------EKKVSLLQNESVEKNKS 262
+++L +++ E A + +NL + SL E V+ +Q E+ E +
Sbjct: 1700 LRSLQEQTERGRRLSEEELLEATERINLFYTQNTSLLSQKKKLEADVARMQKEAEEVVQE 1759
Query: 263 IQSLHNQICSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEA 322
Q+ + IE E L+ + I HL+R ++ + + +L K + EA
Sbjct: 1760 CQNAEEKAKKAAIEAANLSEELKKKQDTIAHLERTRENMEQTITDLQKRL-------AEA 1812
Query: 323 DSM-----KSSVESLQNRVTELESVDKSAGQVARN 352
+ M + ++ L++RV ELE + G++ R+
Sbjct: 1813 EQMALMGSRKQIQKLESRVRELEG--ELEGEIRRS 1845
>gi|34577114 cytomatrix protein p110 [Homo sapiens]
Length = 957
Score = 54.3 bits (129), Expect = 3e-07
Identities = 45/181 (24%), Positives = 84/181 (46%), Gaps = 22/181 (12%)
Query: 219 TNQQIKAHEASSAVQHVNLLKEWSNSLEKKVSLLQNESV--------------EKNKSIQ 264
T + +++ S QH+ +LKE + E++ ++LQ E +K K +Q
Sbjct: 455 TKLETLSNQNSDCKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKESFLNKKTKQLQ 514
Query: 265 SLHNQICSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADS 324
L + + EI K+ML E KI LQ+ I++ E+L++ DK++ + D
Sbjct: 515 DLTEEKGTLAGEIRDMKDMLEVKERKINVLQKKIENLQEQLRDKDKQLTNLK------DR 568
Query: 325 MKSSVESLQNRVTELESVDKSAGQVARNTGLLESQLSRHD--QMLSVHDIRLADMDLRFQ 382
+KS N T L +++++ + R L+ Q R D ++ + R + DL+ +
Sbjct: 569 VKSLQTDSSNTDTALATLEEALSEKERIIERLKEQRERDDRERLEEIESFRKENKDLKEK 628
Query: 383 V 383
V
Sbjct: 629 V 629
Score = 32.7 bits (73), Expect = 0.87
Identities = 30/155 (19%), Positives = 67/155 (43%), Gaps = 14/155 (9%)
Query: 232 VQHVNLLKEWSNSLEKKVSLLQNESVEKNKSIQSLHNQICSFEIEIERQKEMLRNNESKI 291
++ + ++ + L++KV+ LQ E EK S+ L S ++ +SK+
Sbjct: 612 LEEIESFRKENKDLKEKVNALQAELTEKESSLIDLKEHASSLASAGLKR-------DSKL 664
Query: 292 LHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNRVTELESVDKSAGQVAR 351
L+ I+ + E+ +L+ +++ N E+ M +++ +DK A
Sbjct: 665 KSLEIAIEQKKEECSKLEAQLKK-AHNIEDDSRMNPEFAD------QIKQLDKEASYYRD 717
Query: 352 NTGLLESQLSRHDQMLSVHDIRLADMDLRFQVLET 386
G ++++ R ++L + D D + LE+
Sbjct: 718 ECGKAQAEVDRLLEILKEVENEKNDKDKKIAELES 752
>gi|239756241 PREDICTED: golgi autoantigen, golgin subfamily a-like
[Homo sapiens]
Length = 899
Score = 52.0 bits (123), Expect = 1e-06
Identities = 37/200 (18%), Positives = 91/200 (45%), Gaps = 6/200 (3%)
Query: 213 LLRSEGTNQQIKAHEASSAVQHVNLL--KEWSNSLEKKVSLLQNESVEKNKSIQSLHNQI 270
L SE + Q+ E ++ L + +N+L++++ + E E+ K I+ ++
Sbjct: 236 LAESEKSEIQLNVKELKRKLERAKFLLPQVQTNTLQEEMWRQEEELREQEKKIRKQEEKM 295
Query: 271 CSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVE 330
E + Q+ +R E K+ ++ + Q ++L+E +KE+R ++ E+ + M+ E
Sbjct: 296 WRQEERLREQEGKMREQEEKMWRQEKRLREQEKELREQEKELREQKELREQEEQMQEQEE 355
Query: 331 SLQNRVTELESVDKSAGQVARNTGLLESQLSRHDQMLSVHDIRLADMDLRFQVLETASYN 390
+ + ++ ++ + E Q+ +Q + + R+ + D R + E
Sbjct: 356 KMWEQEEKMREQEEKMWRQEERLWEQEKQMREQEQKMRDQEERMWEQDERLREKEERMRE 415
Query: 391 GVLIW----KIRDYKRRKQE 406
+W K+R+ K+ +++
Sbjct: 416 QEKMWEQVEKMREEKKMQEQ 435
Score = 32.3 bits (72), Expect = 1.1
Identities = 22/105 (20%), Positives = 52/105 (49%), Gaps = 6/105 (5%)
Query: 239 KEWSNS--LEKKVSLLQNESVEKNKSIQSLHNQICSFEIEIERQKEMLRNNESKILHLQR 296
K W +EKK + ++ ++ + ++ ++ E ++ ++EM+R E K+ +
Sbjct: 559 KMWDQEERMEKKTQEQEKKTWDQEEKMRE-EERMREREKKMREEEEMMREQEEKMQEQEE 617
Query: 297 VIDSQAEKLKELDKEIRPFRQN-WEEADSMKSSVESL--QNRVTE 338
+ Q EK+ E +++++ + WE+ + M E + Q R+ E
Sbjct: 618 KMQEQEEKMWEQEEKMQEQEEKMWEQEEKMWEQEEKMWEQQRLPE 662
Score = 32.0 bits (71), Expect = 1.5
Identities = 22/104 (21%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 246 EKKVSLLQNESVEKNKSIQSLHNQICSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKL 305
E+K L ++E +++ + I ++ E ++ Q+E +R E K+ + + Q EK+
Sbjct: 772 EQKEKLWEHEKMQEQEKIWEQEEKMRDQEEKMRGQEEKMRGQEEKMRGQEEKMWGQEEKM 831
Query: 306 -KELDKEIRPFRQNWEEADSMKSSVESLQNRVTELESVDKSAGQ 348
+ +K + W + + M+ ++ + ++ E E +K GQ
Sbjct: 832 WGQEEKMWGQEEKMWGQEEKMEEKMQGQEEKMREQE--EKMRGQ 873
Score = 30.4 bits (67), Expect = 4.3
Identities = 28/156 (17%), Positives = 66/156 (42%), Gaps = 3/156 (1%)
Query: 211 QTLLRSEGTNQQIKAHEASSAVQHVNLLKEWSNSLEKKVSLLQNESVEKNKSIQSLHNQI 270
+ L E +Q K E + +++ + EKK E + + +S++ ++
Sbjct: 665 EKLWEHEKMQEQEKMQEQEEKIWEQEKMEKKTQEQEKKT--WDQEKMREEESMREREKKM 722
Query: 271 CSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVE 330
E + Q+E ++ E K+ + + Q EK+ E ++++ ++ E+ + + E
Sbjct: 723 REEEEMMREQEEKMQEQEEKMQEQEEEMWEQEEKMWEQEEKMWEQQRLPEQKEKLWEH-E 781
Query: 331 SLQNRVTELESVDKSAGQVARNTGLLESQLSRHDQM 366
+Q + E +K Q + G E + ++M
Sbjct: 782 KMQEQEKIWEQEEKMRDQEEKMRGQEEKMRGQEEKM 817
Score = 30.0 bits (66), Expect = 5.6
Identities = 21/109 (19%), Positives = 49/109 (44%), Gaps = 1/109 (0%)
Query: 246 EKKVSLLQNESVEKNKSIQSLHNQICSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKL 305
EKK+ + E+ + +Q ++ E ++ Q+E ++ E K+ + + Q EK+
Sbjct: 595 EKKMREEEEMMREQEEKMQEQEEKMQEQEEKMWEQEEKMQEQEEKMWEQEEKMWEQEEKM 654
Query: 306 KELDKEIRPFRQNWE-EADSMKSSVESLQNRVTELESVDKSAGQVARNT 353
E + + WE E + ++ + ++ E E ++K + + T
Sbjct: 655 WEQQRLPEQKEKLWEHEKMQEQEKMQEQEEKIWEQEKMEKKTQEQEKKT 703
Score = 29.6 bits (65), Expect = 7.4
Identities = 28/163 (17%), Positives = 68/163 (41%), Gaps = 23/163 (14%)
Query: 221 QQIKAHEASSAVQHVNLLKEWSNSLEKKVSLLQNESVEKNKSIQSLHNQICSFEIEIERQ 280
Q+ K + +Q ++E + ++ ++ + + K +++ Q E E Q
Sbjct: 435 QEKKTRDQEEKMQEEERIREREKKMREEEETMREQEEKMQKQEENMWEQE-----EKEWQ 489
Query: 281 KEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNW-------------EEADSMKS 327
++ L + K+ Q + Q EK+ E +++IR + W E+ D M
Sbjct: 490 QQRLPEQKEKLWE-QEKMQEQEEKIWEQEEKIRDQEEMWGQEKKMWRQEKMREQEDQMWE 548
Query: 328 SVESLQNRVTEL----ESVDKSAGQVARNTGLLESQLSRHDQM 366
E ++++ ++ E ++K + + T E ++ ++M
Sbjct: 549 QEEKMRDQEQKMWDQEERMEKKTQEQEKKTWDQEEKMREEERM 591
>gi|37595555 ring finger protein 125 [Homo sapiens]
Length = 232
Score = 52.0 bits (123), Expect = 1e-06
Identities = 43/179 (24%), Positives = 69/179 (38%), Gaps = 27/179 (15%)
Query: 21 LHTDRSAGTPVFVPEQGGYKEKFVKTVEDKYKCEKCHLVLCSPKQTECGHRFCESCMAAL 80
L TD P + + + + + C C VL P +T CGH FC SC+A
Sbjct: 5 LSTDSGKSAPASATARALERRRDPELPVTSFDCAVCLEVLHQPVRTRCGHVFCRSCIATS 64
Query: 81 LSSSSPKCTACQESIVKDKVFKDNCCKREILALQIYCRNESRGCAE---QLMLGHLLVHL 137
L ++ C C+ + + V + KR ++E + CAE + L + H+
Sbjct: 65 LKNNKWTCPYCRAYLPSEGVPATDVAKR--------MKSEYKNCAECDTLVCLSEMRAHI 116
Query: 138 KNDCH--------FEELP-----CVRPDCKEKVLRKDLRDH--VEKACKYREATCSHCK 181
+ C +EL CV P C+ ++ L DH + R C C+
Sbjct: 117 RT-CQKYIDKYGPLQELEETAARCVCPFCQRELYEDSLLDHCITHHRSERRPVFCPLCR 174
>gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-like
[Homo sapiens]
Length = 828
Score = 50.8 bits (120), Expect = 3e-06
Identities = 36/198 (18%), Positives = 91/198 (45%), Gaps = 3/198 (1%)
Query: 213 LLRSEGTNQQIKAHEASSAVQHVNLL--KEWSNSLEKKVSLLQNESVEKNKSIQSLHNQI 270
L SE + Q+ E ++ L + +N+L++++ + E E+ K I+ ++
Sbjct: 198 LAESEKSEIQLNVKELKRKLERAKFLLPQVQTNTLQEEMWRQEEELREQEKKIRKQEEKM 257
Query: 271 CSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVE 330
E + Q+ +R E K+ ++ + Q ++L+E +KE+R ++ E+ + M+ E
Sbjct: 258 WRQEERLREQEGKMREQEEKMRRQEKRLREQEKELREQEKELREQKKLREQEEQMQEQEE 317
Query: 331 SLQNRVTELESVDKSAGQVARNTGLLESQLSRHDQMLSVHDIRLADMDLRFQVLETASYN 390
+ + ++ ++ + E Q+ +Q + + R+ + D R + E
Sbjct: 318 KMWEQEEKMREQEEKMWRQEERLWEQEKQMREQEQKMRDQEERMWEQDERLREKEERMRE 377
Query: 391 GVLIWKIRDYKRRKQEAV 408
+W+ ++ K +++E +
Sbjct: 378 QEKMWE-QEEKMQEEERI 394
Score = 33.5 bits (75), Expect = 0.51
Identities = 33/176 (18%), Positives = 78/176 (44%), Gaps = 12/176 (6%)
Query: 238 LKEWSNSLEKKVSLLQNESV-EKNKSIQSLHNQICSFEIEIERQKEMLRNNESKILHLQR 296
++E E++ + + E + E+ K ++ + E ++++Q+E + E K QR
Sbjct: 375 MREQEKMWEQEEKMQEEERIREREKKMREEEETMREQEEKMQKQEENMWEQEEKEWQQQR 434
Query: 297 VIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVE--SLQNRVTELESVDKSAGQVARNTG 354
+ Q EKL E +K + WE+ + ++ E + ++ E + + Q+
Sbjct: 435 -LPEQKEKLWEQEKMQEQEEKIWEQEEKIRDQEEMWGQEKKMWRQEKMREQEDQMWEQ-- 491
Query: 355 LLESQLSRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIW----KIRDYKRRKQE 406
E ++ +Q + + R+ + D R + E +W K+R+ K+ +++
Sbjct: 492 --EEKMRDQEQKMWDQEERMWEQDERLREKEERMREQKKMWQQEEKMREEKKTQEQ 545
Score = 32.7 bits (73), Expect = 0.87
Identities = 20/145 (13%), Positives = 67/145 (46%), Gaps = 8/145 (5%)
Query: 274 EIEIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVESLQ 333
E ++ Q+E +R+ E K+ + + Q E+L+E ++ +R ++ W++ + M+ ++ +
Sbjct: 485 EDQMWEQEEKMRDQEQKMWDQEERMWEQDERLREKEERMREQKKMWQQEEKMREEKKTQE 544
Query: 334 NRVTELESVDKSAGQVARNTGLLESQLSRHDQMLSVHDIRLADMDLRFQVLETASYNGVL 393
+ +K + E ++ ++M+ + ++ + + + + E
Sbjct: 545 QEKKTWDQEEKMREEERMRE--REKKMREEEEMMREQEEKMQEQEEKMREQEEK------ 596
Query: 394 IWKIRDYKRRKQEAVMGKTLSLYSQ 418
+W+ + + ++E + + ++ Q
Sbjct: 597 MWEQEEKMQEQEEKMWEQEEKMWEQ 621
Score = 32.7 bits (73), Expect = 0.87
Identities = 19/125 (15%), Positives = 56/125 (44%), Gaps = 4/125 (3%)
Query: 258 EKNKSIQSLHNQICSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQ 317
E+ K ++ + E +++ Q+E +R E K+ + + Q EK+ E ++++
Sbjct: 564 EREKKMREEEEMMREQEEKMQEQEEKMREQEEKMWEQEEKMQEQEEKMWEQEEKM----W 619
Query: 318 NWEEADSMKSSVESLQNRVTELESVDKSAGQVARNTGLLESQLSRHDQMLSVHDIRLADM 377
EE D M+ E + + +++ ++ + E ++ ++ + + ++ +
Sbjct: 620 EQEEEDKMQEQEEMMWEQEEKMQEQEEKMWEQEEKMREQEEKMREQEEKMQGQEEKMREQ 679
Query: 378 DLRFQ 382
+ + Q
Sbjct: 680 EEKMQ 684
Score = 32.3 bits (72), Expect = 1.1
Identities = 24/138 (17%), Positives = 57/138 (41%), Gaps = 12/138 (8%)
Query: 239 KEWSNSLEKKVSLLQNESVEKNKSIQSLHNQICSFEIEIERQKEMLRNNESKILHLQRVI 298
K W E K+ + E+ + +Q ++ E ++ Q+E +R E K+ + +
Sbjct: 617 KMWEQEEEDKMQEQEEMMWEQEEKMQEQEEKMWEQEEKMREQEEKMREQEEKMQGQEEKM 676
Query: 299 DSQAEKLKELDKEIRPFRQN--------WEEADSMKSSVESLQNRVTELESVDKSAGQVA 350
Q EK++ ++++R + W + + M E + + E ++ Q
Sbjct: 677 REQEEKMQGQEEKMREQEEKMRGQEEKMWGQEEKMWGQEEKMWGQEEMREKEERIRDQKE 736
Query: 351 RNTGLLESQLSRHDQMLS 368
+ ++ +L H++ S
Sbjct: 737 K----MQERLPEHEERCS 750
Score = 30.0 bits (66), Expect = 5.6
Identities = 22/111 (19%), Positives = 48/111 (43%), Gaps = 6/111 (5%)
Query: 215 RSEGTNQQIKAHEASSAVQHVNLLKEWSNSLEKKVSLLQNESVEKNKSIQSLHNQICSFE 274
+ E +Q K E +Q ++E + ++ ++ + + K +++ Q
Sbjct: 371 KEERMREQEKMWEQEEKMQEEERIREREKKMREEEETMREQEEKMQKQEENMWEQE---- 426
Query: 275 IEIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSM 325
E E Q++ L + K+ Q + Q EK+ E +++IR + W + M
Sbjct: 427 -EKEWQQQRLPEQKEKLWE-QEKMQEQEEKIWEQEEKIRDQEEMWGQEKKM 475
>gi|38045898 RAB6-interacting protein 2 isoform epsilon [Homo
sapiens]
Length = 1116
Score = 47.8 bits (112), Expect = 3e-05
Identities = 41/165 (24%), Positives = 78/165 (47%), Gaps = 28/165 (16%)
Query: 219 TNQQIKAHEASSAVQHVNLLKEWSNSLEKKVSLLQNESV--------------EKNKSIQ 264
T + ++ S + QH+ +LKE + E++ ++LQ E +K K IQ
Sbjct: 487 TKLETLTNQFSDSKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKETMLNKKTKQIQ 546
Query: 265 SLHNQICSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADS 324
+ + + EI K+ML E K+ LQ+ I++ E+L++ +K++ S
Sbjct: 547 DMAEEKGTQAGEIHDLKDMLDVKERKVNVLQKKIENLQEQLRDKEKQM----------SS 596
Query: 325 MKSSVESLQ----NRVTELESVDKSAGQVARNTGLLESQLSRHDQ 365
+K V+SLQ N T L +++++ + R L+ Q R ++
Sbjct: 597 LKERVKSLQADTTNTDTALTTLEEALAEKERTIERLKEQRDRDER 641
Score = 42.7 bits (99), Expect = 8e-04
Identities = 33/169 (19%), Positives = 76/169 (44%), Gaps = 5/169 (2%)
Query: 211 QTLLRSEGTNQQIKAHEASSAVQHVNLLKEWSNSLEKKVSLLQNESVEKNKSIQSLHNQI 270
+T+L + Q A E + ++ LK+ + E+KV++LQ + + ++ Q+
Sbjct: 535 ETMLNKKTKQIQDMAEEKGTQAGEIHDLKDMLDVKERKVNVLQKKIENLQEQLRDKEKQM 594
Query: 271 CSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKLKEL-DKEIRPFRQNWEEADSMKSSV 329
S + ++ + N ++ + L+ + + ++ L ++ R R+ EE D+ K +
Sbjct: 595 SSLKERVKSLQADTTNTDTALTTLEEALAEKERTIERLKEQRDRDEREKQEEIDNYKKDL 654
Query: 330 ESLQNRVT----ELESVDKSAGQVARNTGLLESQLSRHDQMLSVHDIRL 374
+ L+ +V+ +L + S + + L S + D L +I L
Sbjct: 655 KDLKEKVSLLQGDLSEKEASLLDLKEHASSLASSGLKKDSRLKTLEIAL 703
Score = 36.6 bits (83), Expect = 0.060
Identities = 45/229 (19%), Positives = 101/229 (44%), Gaps = 15/229 (6%)
Query: 158 LRKDLR-DHVEKACKYREATCSHCKSQVPMIALQKHEDTDCPCVVVSCPHKCSVQTLLRS 216
L+KD R +E A + ++ C +SQ+ E P + H T +
Sbjct: 690 LKKDSRLKTLEIALEQKKEECLKMESQLKKAHEAALEARASPEMSDRIQHLEREITRYKD 749
Query: 217 EGTNQQIKAHEASSAVQHVNLLKEWSNSLEKKVSLLQNESVEKNKSIQSLHNQICSFEIE 276
E + Q + ++ V K N +KK++ L+ + ++NK + +L ++ ++E
Sbjct: 750 ESSKAQAEVDRLLEILKEVENEK---NDKDKKIAELERQVKDQNKKVANLKHK---EQVE 803
Query: 277 IERQKEMLR-------NNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSV 329
++ +ML N LQ + + ++++EL++ +R Q E + + +
Sbjct: 804 KKKSAQMLEEARRREDNLNDSSQQLQDSLRKKDDRIEELEEALRESVQITAEREMVLAQE 863
Query: 330 ESLQ-NRVTELESVDKSAGQVARNTGLLESQLSRHDQMLSVHDIRLADM 377
ES + N ++E + + +V + ++++LS Q L+ + L ++
Sbjct: 864 ESARTNAEKQVEELLMAMEKVKQELESMKAKLSSTQQSLAEKETHLTNL 912
Score = 35.4 bits (80), Expect = 0.13
Identities = 42/211 (19%), Positives = 94/211 (44%), Gaps = 35/211 (16%)
Query: 154 KEKVLRKDLRDHVEKACKYREATCSHCKSQVPMIALQKHEDTDCPCVVVSCPHKCSVQTL 213
K VL+K + +++++ + +E S K +V + +TD + + L
Sbjct: 572 KVNVLQKKI-ENLQEQLRDKEKQMSSLKERVKSLQADT-TNTDTALTTLE-------EAL 622
Query: 214 LRSEGTNQQIKAH---EASSAVQHVNLLKEWSNSLEKKVSLLQNESVEKNKSIQSL---- 266
E T +++K + + ++ K+ L++KVSLLQ + EK S+ L
Sbjct: 623 AEKERTIERLKEQRDRDEREKQEEIDNYKKDLKDLKEKVSLLQGDLSEKEASLLDLKEHA 682
Query: 267 ----------HNQICSFEIEIERQKEMLRNNESKILHLQ------RVIDSQAEKLKELDK 310
+++ + EI +E++KE ES++ R +++++ L++
Sbjct: 683 SSLASSGLKKDSRLKTLEIALEQKKEECLKMESQLKKAHEAALEARASPEMSDRIQHLER 742
Query: 311 EIRPFRQNWEEADSMKSSVESLQNRVTELES 341
EI ++ +E+ ++ V+ L + E+E+
Sbjct: 743 EITRYK---DESSKAQAEVDRLLEILKEVEN 770
>gi|38045896 RAB6-interacting protein 2 isoform delta [Homo sapiens]
Length = 1088
Score = 47.8 bits (112), Expect = 3e-05
Identities = 41/165 (24%), Positives = 78/165 (47%), Gaps = 28/165 (16%)
Query: 219 TNQQIKAHEASSAVQHVNLLKEWSNSLEKKVSLLQNESV--------------EKNKSIQ 264
T + ++ S + QH+ +LKE + E++ ++LQ E +K K IQ
Sbjct: 459 TKLETLTNQFSDSKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKETMLNKKTKQIQ 518
Query: 265 SLHNQICSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADS 324
+ + + EI K+ML E K+ LQ+ I++ E+L++ +K++ S
Sbjct: 519 DMAEEKGTQAGEIHDLKDMLDVKERKVNVLQKKIENLQEQLRDKEKQM----------SS 568
Query: 325 MKSSVESLQ----NRVTELESVDKSAGQVARNTGLLESQLSRHDQ 365
+K V+SLQ N T L +++++ + R L+ Q R ++
Sbjct: 569 LKERVKSLQADTTNTDTALTTLEEALAEKERTIERLKEQRDRDER 613
Score = 42.7 bits (99), Expect = 8e-04
Identities = 33/169 (19%), Positives = 76/169 (44%), Gaps = 5/169 (2%)
Query: 211 QTLLRSEGTNQQIKAHEASSAVQHVNLLKEWSNSLEKKVSLLQNESVEKNKSIQSLHNQI 270
+T+L + Q A E + ++ LK+ + E+KV++LQ + + ++ Q+
Sbjct: 507 ETMLNKKTKQIQDMAEEKGTQAGEIHDLKDMLDVKERKVNVLQKKIENLQEQLRDKEKQM 566
Query: 271 CSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKLKEL-DKEIRPFRQNWEEADSMKSSV 329
S + ++ + N ++ + L+ + + ++ L ++ R R+ EE D+ K +
Sbjct: 567 SSLKERVKSLQADTTNTDTALTTLEEALAEKERTIERLKEQRDRDEREKQEEIDNYKKDL 626
Query: 330 ESLQNRVT----ELESVDKSAGQVARNTGLLESQLSRHDQMLSVHDIRL 374
+ L+ +V+ +L + S + + L S + D L +I L
Sbjct: 627 KDLKEKVSLLQGDLSEKEASLLDLKEHASSLASSGLKKDSRLKTLEIAL 675
Score = 36.6 bits (83), Expect = 0.060
Identities = 45/229 (19%), Positives = 101/229 (44%), Gaps = 15/229 (6%)
Query: 158 LRKDLR-DHVEKACKYREATCSHCKSQVPMIALQKHEDTDCPCVVVSCPHKCSVQTLLRS 216
L+KD R +E A + ++ C +SQ+ E P + H T +
Sbjct: 662 LKKDSRLKTLEIALEQKKEECLKMESQLKKAHEAALEARASPEMSDRIQHLEREITRYKD 721
Query: 217 EGTNQQIKAHEASSAVQHVNLLKEWSNSLEKKVSLLQNESVEKNKSIQSLHNQICSFEIE 276
E + Q + ++ V K N +KK++ L+ + ++NK + +L ++ ++E
Sbjct: 722 ESSKAQAEVDRLLEILKEVENEK---NDKDKKIAELERQVKDQNKKVANLKHK---EQVE 775
Query: 277 IERQKEMLR-------NNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSV 329
++ +ML N LQ + + ++++EL++ +R Q E + + +
Sbjct: 776 KKKSAQMLEEARRREDNLNDSSQQLQDSLRKKDDRIEELEEALRESVQITAEREMVLAQE 835
Query: 330 ESLQ-NRVTELESVDKSAGQVARNTGLLESQLSRHDQMLSVHDIRLADM 377
ES + N ++E + + +V + ++++LS Q L+ + L ++
Sbjct: 836 ESARTNAEKQVEELLMAMEKVKQELESMKAKLSSTQQSLAEKETHLTNL 884
Score = 35.4 bits (80), Expect = 0.13
Identities = 42/211 (19%), Positives = 94/211 (44%), Gaps = 35/211 (16%)
Query: 154 KEKVLRKDLRDHVEKACKYREATCSHCKSQVPMIALQKHEDTDCPCVVVSCPHKCSVQTL 213
K VL+K + +++++ + +E S K +V + +TD + + L
Sbjct: 544 KVNVLQKKI-ENLQEQLRDKEKQMSSLKERVKSLQADT-TNTDTALTTLE-------EAL 594
Query: 214 LRSEGTNQQIKAH---EASSAVQHVNLLKEWSNSLEKKVSLLQNESVEKNKSIQSL---- 266
E T +++K + + ++ K+ L++KVSLLQ + EK S+ L
Sbjct: 595 AEKERTIERLKEQRDRDEREKQEEIDNYKKDLKDLKEKVSLLQGDLSEKEASLLDLKEHA 654
Query: 267 ----------HNQICSFEIEIERQKEMLRNNESKILHLQ------RVIDSQAEKLKELDK 310
+++ + EI +E++KE ES++ R +++++ L++
Sbjct: 655 SSLASSGLKKDSRLKTLEIALEQKKEECLKMESQLKKAHEAALEARASPEMSDRIQHLER 714
Query: 311 EIRPFRQNWEEADSMKSSVESLQNRVTELES 341
EI ++ +E+ ++ V+ L + E+E+
Sbjct: 715 EITRYK---DESSKAQAEVDRLLEILKEVEN 742
>gi|45594312 TNF receptor-associated factor 7 [Homo sapiens]
Length = 670
Score = 47.8 bits (112), Expect = 3e-05
Identities = 62/288 (21%), Positives = 102/288 (35%), Gaps = 52/288 (18%)
Query: 21 LHTDRSAG--TPVFVPEQGGYKEKFVKTVEDKYK--CEKCHLVLCSPKQTECGHRFCESC 76
LH++ S + +PE+ E V + K C+ C V P T CGH FC C
Sbjct: 95 LHSESSMSLRSTFSLPEEEEEPEPLVFAEQPSVKLCCQLCCSVFKDPVITTCGHTFCRRC 154
Query: 77 MAALLSSSSPKCTACQESIVKDKVFKDNCCKREILALQIYCRNESRGCAEQLMLGHLLVH 136
+ K C VK V +N E +G L +H
Sbjct: 155 --------ALKSEKCPVDNVKLTVVVNNIAVAE-------------------QIGELFIH 187
Query: 137 LKNDCHFE---ELPCVRPD---CKEKVLRKDLRDHVEKACKYREATCSHCKSQVPMIALQ 190
++ C + P D C + +DH E +C YR C + S P++ +
Sbjct: 188 CRHGCRVAGSGKPPIFEVDPRGCPFTIKLSARKDH-EGSCDYRPVRCPNNPSCPPLLRMN 246
Query: 191 KHEDTDCPCVVVSCPHKCSVQTLLRSEGTNQQIKAHEASSAVQHVNLLKEWSNSLEKKVS 250
C + CPH T + ++ T +E LKE+ + +
Sbjct: 247 LEAHLK-ECEHIKCPHSKYGCTFIGNQDT------YETHLETCRFEGLKEFLQQTDDRFH 299
Query: 251 LLQNESVEKNKSIQ-------SLHNQICSFEIEIERQKEMLRNNESKI 291
+ +K++ I L +I E +E + ++L N+SK+
Sbjct: 300 EMHVALAQKDQEIAFLRSMLGKLSEKIDQLEKSLELKFDVLDENQSKL 347
>gi|19920317 cytoskeleton-associated protein 4 [Homo sapiens]
Length = 602
Score = 47.0 bits (110), Expect = 4e-05
Identities = 44/193 (22%), Positives = 89/193 (46%), Gaps = 19/193 (9%)
Query: 207 KCSVQTLLRSEGTNQQIKA-HEASSAVQHVNLLKEWS-NSLEKKVSLLQNESVEKNKSIQ 264
K V +L SEG Q +KA EA +Q +EW +L + ++++ + + +
Sbjct: 270 KAKVASLEESEGNKQDLKALKEAVKEIQTSAKSREWDMEALRSTLQTMESDIYTEVRELV 329
Query: 265 SLHNQICSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFR-------- 316
SL + +F+ + ++ L+ K+L + + E+++ L++E+R +
Sbjct: 330 SLKQEQQAFKEAADTERLALQALTEKLLRSEESVSRLPEEIRRLEEELRQLKSDSHGPKE 389
Query: 317 ----QNWEEADSMKSSVESLQNRVTELE-SVDKSAGQVARNTGLLESQLSRHDQMLSVHD 371
++ E ++++ + L +R+ +E V AR T LES LS+ + H+
Sbjct: 390 DGGFRHSEAFEALQQKSQGLDSRLQHVEDGVLSMQVASARQTESLESLLSKSQE----HE 445
Query: 372 IRLADMDLRFQVL 384
RLA + R + L
Sbjct: 446 QRLAALQGRLEGL 458
>gi|30520320 ring finger protein 166 [Homo sapiens]
Length = 237
Score = 47.0 bits (110), Expect = 4e-05
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 5/100 (5%)
Query: 47 VEDKYKCEKCHLVLCSPKQT-ECGHRFCESCMAALLSSSSPKCTACQESIVKDKVFKDNC 105
+E +Y C C V P CGH FC C+ L SP C C+ KV K
Sbjct: 27 LEAQYTCPICLEVYHRPVAIGSCGHTFCGECLQPCLQVPSPLCPLCRLPFDPKKVDKATH 86
Query: 106 CKREILALQIYCRNESRGCAEQLMLGHLLVHLKNDCHFEE 145
++++ + + C RGC +++ L + VH+ + +E
Sbjct: 87 VEKQLSSYKAPC----RGCNKKVTLAKMRVHISSCLKVQE 122
>gi|62243484 sarcoma antigen NY-SAR-41 [Homo sapiens]
Length = 1417
Score = 46.2 bits (108), Expect = 8e-05
Identities = 36/161 (22%), Positives = 80/161 (49%), Gaps = 16/161 (9%)
Query: 227 EASSAVQHVNL-LKEWSNSLEKKVSLLQN-------ESVEKNKSIQSLHNQICSFEIEIE 278
+ ++ V H+++ ++E +E+K+ L+ E E NK I+SL++++ + + ++
Sbjct: 1141 QRAAQVTHLDMTIREHRGEMEQKIIKLEGTLEKSELELKECNKQIESLNDKLQNAKEQLR 1200
Query: 279 RQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQ----NWEEA----DSMKSSVE 330
++ ++ NE +I L++ I+ +++KE++ ++ Q ++EA ++ + E
Sbjct: 1201 EKEFIMLQNEQEISQLKKEIERTQQRMKEMESVMKEQEQYIATQYKEAIDLGQELRLTRE 1260
Query: 331 SLQNRVTELESVDKSAGQVARNTGLLESQLSRHDQMLSVHD 371
+QN TEL Q R L S+L Q+ D
Sbjct: 1261 QVQNSHTELAEARHQQVQAQREIERLSSELEDMKQLSKEKD 1301
Score = 41.6 bits (96), Expect = 0.002
Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 17/141 (12%)
Query: 211 QTLLRSEGTNQQIKAHEASSAVQHVNLLKEWSNSLEK------KVSLLQNESVEKNKSIQ 264
+T+ E + Q K + S ++ L K+ +S EK K +E+ K + +
Sbjct: 921 ETIRNGELEDTQTKLEKQVSKLEQ-ELQKQRESSAEKLRKMEEKCESAAHEADLKRQKVI 979
Query: 265 SLHNQICSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADS 324
L +IE+++ KE L E +I+HL+R +++A L +LD + D
Sbjct: 980 ELTGTARQVKIEMDQYKEELSKMEKEIMHLKRDGENKAMHLSQLDMIL----------DQ 1029
Query: 325 MKSSVESLQNRVTELESVDKS 345
K+ +E N V ELE + S
Sbjct: 1030 TKTELEKKTNAVKELEKLQHS 1050
Score = 35.4 bits (80), Expect = 0.13
Identities = 39/175 (22%), Positives = 78/175 (44%), Gaps = 26/175 (14%)
Query: 214 LRSEGTNQQIKAHEASSAVQ--------HVNLLK----EWSNSLEKK---VSLLQNESVE 258
L+++ + + IK + SA++ H+N L+ ++ L+KK V LQ E
Sbjct: 833 LQNQVSEETIKVRQLDSALEICKEELVLHLNQLEGNKEKFEKQLKKKSEEVYCLQKELKI 892
Query: 259 KNKSIQSLHNQICSFEIEIERQKEMLRN---NESKILHLQRVIDSQAEKL-----KELDK 310
KN S+Q Q + +++Q++ML+ ++ Q ++ Q KL K+ +
Sbjct: 893 KNHSLQETSEQNVILQHTLQQQQQMLQQETIRNGELEDTQTKLEKQVSKLEQELQKQRES 952
Query: 311 EIRPFRQNWEEADSMKSSVESLQNRVTELESVDKSAGQVARNTGLLESQLSRHDQ 365
R+ E+ +S + + +V EL +A QV + +LS+ ++
Sbjct: 953 SAEKLRKMEEKCESAAHEADLKRQKVIELTG---TARQVKIEMDQYKEELSKMEK 1004
Score = 33.1 bits (74), Expect = 0.67
Identities = 42/206 (20%), Positives = 81/206 (39%), Gaps = 48/206 (23%)
Query: 233 QHVNLLKEWSNSLEK----------------------------KVSLLQNESVEKNKSIQ 264
Q + L+E N L + KVS+L++ + ++ S+
Sbjct: 229 QEIKSLREKLNKLRQQNACLVTQNHSLMTKFESIHFELTQSRAKVSMLES-AQQQAASVP 287
Query: 265 SLHNQICSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEI------------ 312
L QI + E E+ Q ++LR E+K+ Q+++ + + L+E +E
Sbjct: 288 ILEEQIINLEAEVSAQDKVLREAENKLEQSQKMVIEKEQSLQESKEECIKLKVDLLEQTK 347
Query: 313 ---RPFRQNWE---EADSMKSSVESLQNRVTE-LESVDKSAGQVARNTGLLESQLSRHDQ 365
R RQ E A+ + + + + +V E LE V + RN E + R +
Sbjct: 348 QGKRAERQRNEALYNAEELSKAFQQYKKKVAEKLEKVQAEEEILERNLTNCEKENKRLQE 407
Query: 366 MLSVHDIRLADMDLRFQVLETASYNG 391
++ L + + + L+ + NG
Sbjct: 408 RCGLYKSELEILKEKLRQLKEENNNG 433
Score = 29.6 bits (65), Expect = 7.4
Identities = 22/84 (26%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 238 LKEWSNSLEKKVSLLQNESVEKNKSIQSLHNQICSFEIEIERQKEMLRN-----NESKIL 292
LKE +N+ ++K+ ++ ++ E + I E E+E + E+LR+ NE++ L
Sbjct: 426 LKEENNNGKEKLRIMAVKNSEVMAQLTESRQSILKLESELENKDEILRDKFSLMNENREL 485
Query: 293 HLQRVIDSQAEKLKELDKEIRPFR 316
++ + +Q E+L +EI R
Sbjct: 486 KVR--VAAQNERLDLCQQEIESSR 507
>gi|21361539 ring finger protein 138 isoform 1 [Homo sapiens]
Length = 245
Score = 45.8 bits (107), Expect = 1e-04
Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 8/96 (8%)
Query: 48 EDKYKCEKCHLVLCSP-KQTECGHRFCESCMAALLSSSSPKCTACQESIVKDKVFKDNCC 106
ED + C C VL +P + T C H FC C + S C C+ ++ + ++ C
Sbjct: 13 EDDFYCPVCQEVLKTPVRTTACQHVFCRKCFLTAMRESGAHCPLCRGNVTR----RERAC 68
Query: 107 KREILALQIYCRNES---RGCAEQLMLGHLLVHLKN 139
L L+ R S R CA+Q+ + H K+
Sbjct: 69 PERALDLENIMRKFSGSCRCCAKQIKFYRMRHHYKS 104
>gi|124517695 ankyrin repeat domain 36B [Homo sapiens]
Length = 1121
Score = 45.4 bits (106), Expect = 1e-04
Identities = 65/285 (22%), Positives = 125/285 (43%), Gaps = 34/285 (11%)
Query: 144 EELPCVRPDCKEKV-LRKDLRDHVEKACKYRE---ATCSHCKSQVPMIALQKHEDTDCPC 199
EE +P K ++ R DL D ++ + E + C +CK+ + +I + + DC
Sbjct: 515 EEYENNQPQVKNQIHSRDDLDDIIQSSQTVSEDGDSLCCNCKNVILLIDQHEMKCKDCVH 574
Query: 200 VVVSCPHKCSVQTLLRSEGTNQQIKAHEASSAVQHVNLLKEWSNSLEKKVSLLQNESVEK 259
++ C + L++ +K + + LK ++ L+K++S + +
Sbjct: 575 LLKIKNTFCLWKRLIK-------LKDNHCEQLRVKIRKLKNKASVLQKRISEKEEIKSQL 627
Query: 260 NKSIQSLHNQICSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNW 319
I L ++CS I+++K+ RN E LH Q+V EKL+ +++ R
Sbjct: 628 KHEILELEKELCSLRFAIQQEKKKRRNVEE--LH-QKV----REKLRITEEQYR------ 674
Query: 320 EEADSMKSSVESLQNRVTELESVDKSAGQVARNTGLLESQLSRHDQMLSVHDI---RLAD 376
EAD K +L++ EL++ ++ QV+ E + H+ L +I RL
Sbjct: 675 IEADVTKPIKPALKSAEVELKTGGNNSNQVSETD---EKEDLLHENRLMQDEIARLRLEK 731
Query: 377 MDLRFQVLETASYNGVLIWKIR--DYKR--RKQEAVMGKTLSLYS 417
++ Q LE I K + D ++ ++ + KT++ YS
Sbjct: 732 DTIKNQNLEKKYLKDFEIVKRKHEDLQKALKRNGETLAKTIACYS 776
>gi|239741684 PREDICTED: ankyrin repeat domain 36 [Homo sapiens]
Length = 1524
Score = 45.1 bits (105), Expect = 2e-04
Identities = 61/285 (21%), Positives = 122/285 (42%), Gaps = 34/285 (11%)
Query: 144 EELPCVRPDCKEKV-LRKDLRDHVEKACKYRE---ATCSHCKSQVPMIALQKHEDTDCPC 199
EE +P K ++ R DL D ++ + E + C +CK+ + +I + + DC
Sbjct: 918 EEYENNQPQVKNQIHSRDDLDDIIQSSQTVSEDGDSLCCNCKNVILLIDQHEMKCKDCVH 977
Query: 200 VVVSCPHKCSVQTLLRSEGTNQQIKAHEASSAVQHVNLLKEWSNSLEKKVSLLQNESVEK 259
++ C + L++ +K + + LK ++ L+K++S + +
Sbjct: 978 LLKIKNTFCLWKRLIK-------LKDNHCEQLRVKIRKLKNKASVLQKRISEKEEIKSQL 1030
Query: 260 NKSIQSLHNQICSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNW 319
I L ++CS I+++K+ RN ++ V EKL+ +++ R
Sbjct: 1031 KHEILELEKELCSLRFAIQQEKKKRRN-------VEEVHQKVREKLRITEEQYR------ 1077
Query: 320 EEADSMKSSVESLQNRVTELESVDKSAGQVARNTGLLESQLSRHDQMLSVHDI---RLAD 376
EAD K +L++ EL++ ++ QV+ E + H+ L +I RL
Sbjct: 1078 IEADVTKPIKPALKSAEVELKTGGNNSNQVSETD---EKEDLLHENRLMQDEIARLRLEK 1134
Query: 377 MDLRFQVLETASYNGVLIWKIR--DYKR--RKQEAVMGKTLSLYS 417
++ Q LE I K + D ++ ++ + KT++ YS
Sbjct: 1135 DTIKNQNLEKKYLKDFEIVKRKHEDLQKALKRNGETLAKTIACYS 1179
>gi|239745079 PREDICTED: Putative golgin subfamily A member 6-like
protein 6 [Homo sapiens]
Length = 724
Score = 44.7 bits (104), Expect = 2e-04
Identities = 24/123 (19%), Positives = 59/123 (47%), Gaps = 1/123 (0%)
Query: 246 EKKVSLLQNESVEKNKSIQSLHNQICSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKL 305
E+K+ + + E+ + + ++C E +++ Q+E +R E KI ++ I Q EK+
Sbjct: 598 EEKIREQEEMTQEQEEKMGEQEEKMCEQEEKMQEQEEKMRRQEEKIREQEKKIREQEEKI 657
Query: 306 KELDKEIRPFRQN-WEEADSMKSSVESLQNRVTELESVDKSAGQVARNTGLLESQLSRHD 364
+E ++ ++ + WE+ + M E +Q + ++ ++ + E ++ H
Sbjct: 658 REQEEMMQEQEEKMWEQEEKMCEQEEKMQEQEEKMRRQEEKMWEQEVRLRQQEEKMQEHQ 717
Query: 365 QML 367
+ L
Sbjct: 718 EHL 720
Score = 40.8 bits (94), Expect = 0.003
Identities = 44/226 (19%), Positives = 92/226 (40%), Gaps = 23/226 (10%)
Query: 214 LRSEGTNQQIKAHEASSAVQHVNL-LKEWSNSLEKKVSLL-----QNESVEKNKSIQSLH 267
L+ + Q K S + L +KE LE+ LL Q E+ K +QS+
Sbjct: 280 LKEKNAKLQEKLQLVESEKSEIQLNVKELKRKLERAKLLLPQQQLQAEADHLGKELQSVS 339
Query: 268 NQICSFEIEIE-------RQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQN-- 318
++ + E E +Q+E + E KI + I Q EK++E +++IR +
Sbjct: 340 AKLQAQVEENELWNRLNQQQEEKMWRQEEKIQEWEEKIQEQEEKIREQEEKIREQEEKMR 399
Query: 319 ------WEEADSMKSSVESLQNRVTELESVDKSAGQVARNTGLLESQLSRHDQMLSVHDI 372
WE+ + M+ E + + ++ ++ + LE ++ +++ +
Sbjct: 400 RQEEMMWEKEEKMRRQEEMMWEKEEKMRRQEEMMWEKEEKIRELEEKMHEQEKIREQEEK 459
Query: 373 RLADMDLRFQVLETASYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQ 418
R + +R Q E +W+ + R ++E + + ++ Q
Sbjct: 460 RQEEEKIREQ--EKRQEQEAKMWRQEEKIREQEEKIREQEEKMWRQ 503
Score = 37.7 bits (86), Expect = 0.027
Identities = 28/173 (16%), Positives = 75/173 (43%), Gaps = 9/173 (5%)
Query: 215 RSEGTNQQIKAHEASSAVQHVNLLKEWSNSLEKKVSLLQNESV-EKNKSIQSLHNQICSF 273
+ E ++Q K E + + ++ E++ Q E + E+ + I+ ++
Sbjct: 503 QEEKIHEQEKIREEEKRQEQEEMWRQEEKIREQEEIWRQKEKIHEQEEKIRKQEEKMWRQ 562
Query: 274 EIEIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQ--------NWEEADSM 325
E ++ Q+E +R E K+ + I Q EK++E +++IR + E+ + M
Sbjct: 563 EEKMHDQEEKIREQEEKVWRQEEKIREQEEKIREQEEKIREQEEMTQEQEEKMGEQEEKM 622
Query: 326 KSSVESLQNRVTELESVDKSAGQVARNTGLLESQLSRHDQMLSVHDIRLADMD 378
E +Q + ++ ++ + + E ++ ++M+ + ++ + +
Sbjct: 623 CEQEEKMQEQEEKMRRQEEKIREQEKKIREQEEKIREQEEMMQEQEEKMWEQE 675
Score = 35.4 bits (80), Expect = 0.13
Identities = 26/117 (22%), Positives = 51/117 (43%), Gaps = 7/117 (5%)
Query: 221 QQIKAHEASSAVQHVNLLKEWSNSLEKKVSLLQNESVEKNKSI----QSLHNQ---ICSF 273
Q+ K + ++E E++ Q E + + + I + +H Q I
Sbjct: 496 QEEKMWRQEEKIHEQEKIREEEKRQEQEEMWRQEEKIREQEEIWRQKEKIHEQEEKIRKQ 555
Query: 274 EIEIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVE 330
E ++ RQ+E + + E KI + + Q EK++E +++IR + E + M E
Sbjct: 556 EEKMWRQEEKMHDQEEKIREQEEKVWRQEEKIREQEEKIREQEEKIREQEEMTQEQE 612
Score = 29.3 bits (64), Expect = 9.6
Identities = 29/156 (18%), Positives = 68/156 (43%), Gaps = 18/156 (11%)
Query: 255 ESVEKNKSIQSLHNQICSFEIEIE--RQKEMLRNNESKILHLQRVIDSQAEKLKELDKEI 312
E EK + + + Q E E + RQ+E +R E KI + + Q EK+ E +K I
Sbjct: 455 EQEEKRQEEEKIREQEKRQEQEAKMWRQEEKIREQEEKIREQEEKMWRQEEKIHEQEK-I 513
Query: 313 RPFRQNWEEADSMKSSVESLQNRVTELESVDKSAGQVARNTGLLESQLSRHDQMLSVHDI 372
R + E+ + + + ++ E E + + ++ E ++ + ++ + +
Sbjct: 514 REEEKRQEQEEMWRQ-----EEKIREQEEIWRQKEKIHEQ----EEKIRKQEEKMWRQEE 564
Query: 373 RLADMDLRFQVLETASYNGVLIWKIRDYKRRKQEAV 408
++ D + + + E +W+ + R ++E +
Sbjct: 565 KMHDQEEKIREQEEK------VWRQEEKIREQEEKI 594
>gi|32189362 PTPRF interacting protein alpha 3 [Homo sapiens]
Length = 1194
Score = 44.7 bits (104), Expect = 2e-04
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 15/147 (10%)
Query: 224 KAHEASSAVQHVNLLKE---WSNSLEKKVSLLQNESVEKNKSIQSLHNQICSFEIEIERQ 280
KA EA+S +Q LKE +E++++ L+ + + SLH+ E E+ +
Sbjct: 279 KAEEANSKLQRD--LKEALAQREDMEERITTLEKRYLSAQREATSLHDANDKLENELASK 336
Query: 281 KEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNRVTELE 340
+ + R +E K L +D +KL +Q ++A+++ L RV L
Sbjct: 337 ESLYRQSEEKSRQLAEWLDDAKQKL----------QQTLQKAETLPEIEAQLAQRVAALN 386
Query: 341 SVDKSAGQVARNTGLLESQLSRHDQML 367
++ G LE+QL +Q L
Sbjct: 387 KAEERHGNFEERLRQLEAQLEEKNQEL 413
>gi|190194355 p90 autoantigen [Homo sapiens]
Length = 905
Score = 44.3 bits (103), Expect = 3e-04
Identities = 39/169 (23%), Positives = 81/169 (47%), Gaps = 16/169 (9%)
Query: 207 KCSVQTLLRSEGTNQQIKAHEAS--SAVQHVNLLKEWSNSLEKKVSLLQNESVEKNKSIQ 264
K ++ L R+E T ++ K + + S + + +K+ + SL+++ + +EK + +
Sbjct: 729 KSYMELLQRNESTEKKNKDLQITCDSLNKQIETVKKLNESLKEQNEKSIAQLIEKEEQRK 788
Query: 265 SLHNQICSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADS 324
+ NQ+ E ++ + + E KI LQ+ + + E + L KE+ Q +E
Sbjct: 789 EVQNQLVDREHKLANLHQKTKVQEEKIKTLQKEREDKEETIDILRKELSRTEQIRKELSI 848
Query: 325 MKSSVE----SLQNRVTELESVDKSAGQVARNTGLLESQLSRHDQMLSV 369
SS+E L+ R+ E ES+ K L + +L++H M+++
Sbjct: 849 KASSLEVQKAQLEGRLEEKESLVK----------LQQEELNKHSHMIAM 887
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.132 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,955,936
Number of Sequences: 37866
Number of extensions: 958215
Number of successful extensions: 6788
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 232
Number of HSP's successfully gapped in prelim test: 493
Number of HSP's that attempted gapping in prelim test: 5182
Number of HSP's gapped (non-prelim): 1712
length of query: 543
length of database: 18,247,518
effective HSP length: 107
effective length of query: 436
effective length of database: 14,195,856
effective search space: 6189393216
effective search space used: 6189393216
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.