Guide to the Human Genome
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Name: FKBP11 Sequence: fasta or formatted (99aa) NCBI GI: 219842217
Description:

FK506 binding protein 11 isoform 2

Referenced in:

Peptidylprolyl Isomerases

Other entries for this name:
alt prot [146aa] FK506 binding protein 11 isoform 3 precursor
alt prot [201aa] FK506 binding protein 11 isoform 1 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.1          9           1
 C cysteine            1.0          1           1
 D aspartate           2.0          2           1
 E glutamate           4.0          4           2
 F phenylalanine       1.0          1           1
 G glycine             7.1          7           1
 H histidine           2.0          2           1
 I isoleucine          6.1          6           2
 K lysine             15.2         15           3
 L leucine            12.1         12           2
 M methionine          3.0          3           1
 N asparagine          3.0          3           1
 P proline             7.1          7           2
 Q glutamine           1.0          1           1
 R arginine            7.1          7           2
 S serine              4.0          4           1
 T threonine           0.0          0           0
 V valine              9.1          9           2
 W tryptophan          1.0          1           1
 Y tyrosine            5.1          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   FK506 binding protein 11 isoform 2 
FKBP11                1.000   FK506 binding protein 11 isoform 1 precursor 
FKBP11                0.206   FK506 binding protein 11 isoform 3 precursor 
FKBP2                 0.166   FK506 binding protein 2, 13kDa precursor 
FKBP2                 0.166   FK506 binding protein 2, 13kDa precursor 
FKBP2                 0.166   FK506 binding protein 2, 13kDa precursor 
FKBP9                 0.160   FK506 binding protein 9 
FKBP7                 0.137   FK506 binding protein 7 isoform b precursor 
FKBP10                0.114   FK506 binding protein 10 
FKBP7                 0.114   FK506 binding protein 7 isoform a precursor 
FKBP14                0.086   FK506 binding protein 14 
FKBP1A                0.057   FK506 binding protein 1A, 12kDa 
FKBP1A                0.057   FK506 binding protein 1A, 12kDa 
FKBP3                 0.046   FK506 binding protein 3, 25kDa 
FKBP1B                0.040   FK506 binding protein 1B, 12.6 kDa isoform a 
FKBP6                 0.040   FK506 binding protein 6 isoform b 
FKBP6                 0.040   FK506 binding protein 6 isoform a 
FKBP4                 0.040   FK506 binding protein 52 
TAF3                  0.029   RNA polymerase II transcription factor TAFII140 [Ho...
AP3D1                 0.029   adaptor-related protein complex 3, delta 1 subunit ...
AP3D1                 0.029   adaptor-related protein complex 3, delta 1 subunit ...
MMRN1                 0.029   multimerin 1 
LOC100131202          0.017   PREDICTED: hypothetical protein 
LOC100131202          0.017   PREDICTED: hypothetical protein 
FKBP5                 0.011   FK506 binding protein 5 isoform 2 
FKBP5                 0.011   FK506 binding protein 5 isoform 1 
FKBP5                 0.011   FK506 binding protein 5 isoform 1 
FKBP5                 0.011   FK506 binding protein 5 isoform 1 
DHCR7                 0.011   7-dehydrocholesterol reductase 
BTN3A1                0.011   butyrophilin, subfamily 3, member A1 isoform b [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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