Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: FKBP11 Sequence: fasta or formatted (146aa) NCBI GI: 219842220
Description:

FK506 binding protein 11 isoform 3 precursor

Referenced in:

Peptidylprolyl Isomerases

Other entries for this name:
alt prot [99aa] FK506 binding protein 11 isoform 2
alt prot [201aa] FK506 binding protein 11 isoform 1 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2          9           2
 C cysteine            2.1          3           1
 D aspartate           4.1          6           1
 E glutamate           6.8         10           1
 F phenylalanine       1.4          2           1
 G glycine             7.5         11           1
 H histidine           2.7          4           1
 I isoleucine          4.8          7           2
 K lysine              2.7          4           1
 L leucine            16.4         24           7
 M methionine          2.7          4           1
 N asparagine          0.7          1           1
 P proline            10.3         15           2
 Q glutamine           3.4          5           1
 R arginine            6.2          9           2
 S serine              7.5         11           3
 T threonine           6.8         10           1
 V valine              6.2          9           1
 W tryptophan          0.0          0           0
 Y tyrosine            1.4          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   FK506 binding protein 11 isoform 3 precursor 
FKBP11                0.873   FK506 binding protein 11 isoform 1 precursor 
FKBP2                 0.247   FK506 binding protein 2, 13kDa precursor 
FKBP2                 0.247   FK506 binding protein 2, 13kDa precursor 
FKBP2                 0.247   FK506 binding protein 2, 13kDa precursor 
FKBP10                0.232   FK506 binding protein 10 
FKBP9                 0.213   FK506 binding protein 9 
FKBP7                 0.161   FK506 binding protein 7 isoform b precursor 
FKBP7                 0.150   FK506 binding protein 7 isoform a precursor 
FKBP11                0.135   FK506 binding protein 11 isoform 2 
FKBP3                 0.120   FK506 binding protein 3, 25kDa 
FKBP1A                0.120   FK506 binding protein 1A, 12kDa 
FKBP1A                0.120   FK506 binding protein 1A, 12kDa 
FKBP14                0.112   FK506 binding protein 14 
FKBP4                 0.109   FK506 binding protein 52 
FKBP1B                0.101   FK506 binding protein 1B, 12.6 kDa isoform a 
FKBP5                 0.086   FK506 binding protein 5 isoform 2 
FKBP5                 0.086   FK506 binding protein 5 isoform 1 
FKBP5                 0.086   FK506 binding protein 5 isoform 1 
FKBP5                 0.086   FK506 binding protein 5 isoform 1 
FKBP15                0.079   FK506 binding protein 15, 133kDa 
FKBP6                 0.049   FK506 binding protein 6 isoform b 
FKBP6                 0.049   FK506 binding protein 6 isoform a 
FKBP1B                0.041   FK506 binding protein 1B, 12.6 kDa isoform b 
FKBP8                 0.037   FK506-binding protein 8 
THSD7A                0.019   thrombospondin, type I, domain containing 7A 
C19orf24              0.019   hypothetical protein LOC55009 
ASTN2                 0.011   astrotactin 2 isoform c 
ASTN2                 0.011   astrotactin 2 isoform b 
ASTN2                 0.011   astrotactin 2 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press