Guide to the Human Genome
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Name: FKBP1B Sequence: fasta or formatted (108aa) NCBI GI: 4758380
Description:

FK506 binding protein 1B, 12.6 kDa isoform a

Referenced in:

Peptidylprolyl Isomerases

Other entries for this name:
alt prot [80aa] FK506 binding protein 1B, 12.6 kDa isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6          6           2
 C cysteine            1.9          2           1
 D aspartate           4.6          5           1
 E glutamate           6.5          7           2
 F phenylalanine       5.6          6           1
 G glycine            12.0         13           1
 H histidine           1.9          2           1
 I isoleucine          5.6          6           1
 K lysine              8.3          9           2
 L leucine             6.5          7           2
 M methionine          2.8          3           1
 N asparagine          3.7          4           1
 P proline             6.5          7           2
 Q glutamine           4.6          5           1
 R arginine            4.6          5           1
 S serine              3.7          4           2
 T threonine           7.4          8           1
 V valine              6.5          7           2
 W tryptophan          0.0          0           0
 Y tyrosine            1.9          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   FK506 binding protein 1B, 12.6 kDa isoform a 
FKBP1A                0.864   FK506 binding protein 1A, 12kDa 
FKBP1A                0.864   FK506 binding protein 1A, 12kDa 
FKBP1B                0.578   FK506 binding protein 1B, 12.6 kDa isoform b 
FKBP5                 0.382   FK506 binding protein 5 isoform 2 
FKBP5                 0.382   FK506 binding protein 5 isoform 1 
FKBP5                 0.382   FK506 binding protein 5 isoform 1 
FKBP5                 0.382   FK506 binding protein 5 isoform 1 
FKBP4                 0.372   FK506 binding protein 52 
FKBP2                 0.317   FK506 binding protein 2, 13kDa precursor 
FKBP2                 0.317   FK506 binding protein 2, 13kDa precursor 
FKBP2                 0.317   FK506 binding protein 2, 13kDa precursor 
FKBP3                 0.296   FK506 binding protein 3, 25kDa 
FKBP10                0.251   FK506 binding protein 10 
FKBP9                 0.236   FK506 binding protein 9 
FKBP7                 0.226   FK506 binding protein 7 isoform b precursor 
FKBP7                 0.201   FK506 binding protein 7 isoform a precursor 
FKBP14                0.201   FK506 binding protein 14 
FKBP11                0.191   FK506 binding protein 11 isoform 1 precursor 
FKBP6                 0.186   FK506 binding protein 6 isoform b 
FKBP6                 0.186   FK506 binding protein 6 isoform a 
FKBP11                0.136   FK506 binding protein 11 isoform 3 precursor 
FKBP15                0.121   FK506 binding protein 15, 133kDa 
FKBP8                 0.106   FK506-binding protein 8 
FKBP11                0.035   FK506 binding protein 11 isoform 2 
AIP                   0.020   aryl hydrocarbon receptor interacting protein [Homo...
PLEKHA7               0.020   pleckstrin homology domain containing, family A mem...
C10orf68              0.010   chromosome 10 open reading frame 68 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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