Guide to the Human Genome
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Name: FKBP11 Sequence: fasta or formatted (201aa) NCBI GI: 7706131
Description:

FK506 binding protein 11 isoform 1 precursor

Referenced in:

Peptidylprolyl Isomerases

Other entries for this name:
alt prot [99aa] FK506 binding protein 11 isoform 2
alt prot [146aa] FK506 binding protein 11 isoform 3 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.0         16           2
 C cysteine            1.5          3           1
 D aspartate           3.5          7           1
 E glutamate           6.5         13           2
 F phenylalanine       1.0          2           1
 G glycine             6.5         13           1
 H histidine           2.5          5           1
 I isoleucine          5.5         11           2
 K lysine              8.0         16           3
 L leucine            16.9         34           7
 M methionine          2.0          4           1
 N asparagine          1.5          3           1
 P proline             8.0         16           2
 Q glutamine           2.5          5           1
 R arginine            6.0         12           2
 S serine              5.0         10           1
 T threonine           4.0          8           1
 V valine              8.0         16           2
 W tryptophan          0.5          1           1
 Y tyrosine            3.0          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   FK506 binding protein 11 isoform 1 precursor 
FKBP11                0.626   FK506 binding protein 11 isoform 3 precursor 
FKBP11                0.470   FK506 binding protein 11 isoform 2 
FKBP2                 0.196   FK506 binding protein 2, 13kDa precursor 
FKBP2                 0.196   FK506 binding protein 2, 13kDa precursor 
FKBP2                 0.196   FK506 binding protein 2, 13kDa precursor 
FKBP10                0.177   FK506 binding protein 10 
FKBP9                 0.169   FK506 binding protein 9 
FKBP7                 0.145   FK506 binding protein 7 isoform b precursor 
FKBP7                 0.134   FK506 binding protein 7 isoform a precursor 
FKBP1A                0.116   FK506 binding protein 1A, 12kDa 
FKBP1A                0.116   FK506 binding protein 1A, 12kDa 
FKBP3                 0.108   FK506 binding protein 3, 25kDa 
FKBP1B                0.102   FK506 binding protein 1B, 12.6 kDa isoform a 
FKBP4                 0.099   FK506 binding protein 52 
FKBP14                0.091   FK506 binding protein 14 
FKBP5                 0.086   FK506 binding protein 5 isoform 2 
FKBP5                 0.086   FK506 binding protein 5 isoform 1 
FKBP5                 0.086   FK506 binding protein 5 isoform 1 
FKBP5                 0.086   FK506 binding protein 5 isoform 1 
FKBP15                0.065   FK506 binding protein 15, 133kDa 
FKBP6                 0.056   FK506 binding protein 6 isoform b 
FKBP6                 0.056   FK506 binding protein 6 isoform a 
FKBP8                 0.035   FK506-binding protein 8 
FKBP1B                0.030   FK506 binding protein 1B, 12.6 kDa isoform b 
TAF3                  0.013   RNA polymerase II transcription factor TAFII140 [Ho...
AP3D1                 0.013   adaptor-related protein complex 3, delta 1 subunit ...
AP3D1                 0.013   adaptor-related protein complex 3, delta 1 subunit ...
MMRN1                 0.013   multimerin 1 
ZNF638                0.013   zinc finger protein 638 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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