Guide to the Human Genome
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Name: DHCR7 Sequence: fasta or formatted (475aa) NCBI GI: 119943112
Description:

7-dehydrocholesterol reductase

Referenced in:

Cholesterol Biosynthesis
Nucleus and Nucleolus

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.8         37           2
 C cysteine            2.7         13           1
 D aspartate           4.2         20           1
 E glutamate           1.7          8           1
 F phenylalanine       6.7         32           2
 G glycine             7.8         37           3
 H histidine           3.6         17           2
 I isoleucine          5.9         28           2
 K lysine              3.8         18           1
 L leucine            11.6         55           3
 M methionine          1.7          8           2
 N asparagine          3.6         17           1
 P proline             4.4         21           2
 Q glutamine           3.2         15           1
 R arginine            4.4         21           2
 S serine              4.4         21           1
 T threonine           5.3         25           1
 V valine              6.9         33           2
 W tryptophan          4.2         20           1
 Y tyrosine            6.1         29           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   7-dehydrocholesterol reductase 
LBR                   0.239   lamin B receptor 
LBR                   0.239   lamin B receptor 
TM7SF2                0.238   transmembrane 7 superfamily member 2 
SNX13                 0.007   sorting nexin 13 
ATP8A2                0.005   ATPase, aminophospholipid transporter-like, Class I...
CDIPT                 0.005   CDP-diacylglycerol-inositol 3-phosphatidyltransferase...
DTNA                  0.005   dystrobrevin alpha isoform 2 
DTNA                  0.005   dystrobrevin alpha isoform 1 
DTNA                  0.005   dystrobrevin alpha isoform 3 
DTNA                  0.005   dystrobrevin alpha isoform 4 
DTNA                  0.005   dystrobrevin alpha isoform 5 
DTNA                  0.005   dystrobrevin alpha isoform 7 
DTNA                  0.005   dystrobrevin alpha isoform 9 
CLCN1                 0.004   chloride channel 1, skeletal muscle 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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