Guide to the Human Genome
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Name: FKBP1A Sequence: fasta or formatted (108aa) NCBI GI: 4503725
Description:

FK506 binding protein 1A, 12kDa

Referenced in:

mTOR Pathway
Peptidylprolyl Isomerases

Other entries for this name:
alt mRNA [108aa] FK506 binding protein 1A, 12kDa
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.6          5           1
 C cysteine            0.9          1           1
 D aspartate           5.6          6           1
 E glutamate           6.5          7           2
 F phenylalanine       4.6          5           1
 G glycine            12.0         13           1
 H histidine           2.8          3           1
 I isoleucine          4.6          5           2
 K lysine              7.4          8           2
 L leucine             6.5          7           2
 M methionine          3.7          4           1
 N asparagine          0.9          1           1
 P proline             6.5          7           2
 Q glutamine           4.6          5           1
 R arginine            5.6          6           1
 S serine              4.6          5           2
 T threonine           6.5          7           1
 V valine              8.3          9           2
 W tryptophan          0.9          1           1
 Y tyrosine            2.8          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   FK506 binding protein 1A, 12kDa 
FKBP1A                1.000   FK506 binding protein 1A, 12kDa 
FKBP1B                0.860   FK506 binding protein 1B, 12.6 kDa isoform a 
FKBP1B                0.510   FK506 binding protein 1B, 12.6 kDa isoform b 
FKBP4                 0.395   FK506 binding protein 52 
FKBP5                 0.375   FK506 binding protein 5 isoform 2 
FKBP5                 0.375   FK506 binding protein 5 isoform 1 
FKBP5                 0.375   FK506 binding protein 5 isoform 1 
FKBP5                 0.375   FK506 binding protein 5 isoform 1 
FKBP2                 0.360   FK506 binding protein 2, 13kDa precursor 
FKBP2                 0.360   FK506 binding protein 2, 13kDa precursor 
FKBP2                 0.360   FK506 binding protein 2, 13kDa precursor 
FKBP3                 0.320   FK506 binding protein 3, 25kDa 
FKBP10                0.275   FK506 binding protein 10 
FKBP14                0.250   FK506 binding protein 14 
FKBP7                 0.245   FK506 binding protein 7 isoform b precursor 
FKBP9                 0.245   FK506 binding protein 9 
FKBP7                 0.220   FK506 binding protein 7 isoform a precursor 
FKBP11                0.215   FK506 binding protein 11 isoform 1 precursor 
FKBP6                 0.195   FK506 binding protein 6 isoform b 
FKBP6                 0.195   FK506 binding protein 6 isoform a 
FKBP11                0.160   FK506 binding protein 11 isoform 3 precursor 
FKBP8                 0.135   FK506-binding protein 8 
FKBP15                0.135   FK506 binding protein 15, 133kDa 
AIP                   0.050   aryl hydrocarbon receptor interacting protein [Homo...
FKBP11                0.050   FK506 binding protein 11 isoform 2 
ANXA7                 0.015   annexin VII isoform 1 
PLEKHA7               0.015   pleckstrin homology domain containing, family A mem...
LRRC37B               0.015   leucine rich repeat containing 37B 
LOC100294335          0.010   PREDICTED: similar to c114 SLIT-like testicular pro...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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