Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ZNF182 Sequence: fasta or formatted (620aa) NCBI GI: 55769561
Description:

zinc finger protein 21 isoform 2

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt prot [639aa] zinc finger protein 21 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.4         21           1
 C cysteine            5.5         34           1
 D aspartate           2.6         16           2
 E glutamate           9.2         57           2
 F phenylalanine       5.0         31           2
 G glycine             6.5         40           1
 H histidine           6.6         41           2
 I isoleucine          4.5         28           2
 K lysine             11.5         71           2
 L leucine             5.5         34           2
 M methionine          1.1          7           1
 N asparagine          3.5         22           2
 P proline             4.0         25           2
 Q glutamine           5.5         34           2
 R arginine            4.5         28           2
 S serine              5.5         34           2
 T threonine           8.5         53           1
 V valine              3.5         22           1
 W tryptophan          0.6          4           1
 Y tyrosine            2.9         18           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 21 isoform 2 
ZNF182                0.994   zinc finger protein 21 isoform 1 
LOC100287429          0.496   PREDICTED: hypothetical protein XP_002343926 isofor...
LOC100287429          0.496   PREDICTED: hypothetical protein XP_002343925 isofor...
LOC100287429          0.496   PREDICTED: hypothetical protein XP_002343927 isofor...
ZNF84                 0.496   zinc finger protein 84 
ZNF84                 0.496   zinc finger protein 84 
ZNF568                0.492   zinc finger protein 568 
ZNF268                0.488   zinc finger protein 268 
ZNF569                0.482   zinc finger protein 569 
ZNF12                 0.467   zinc finger protein 12 isoform a 
ZNF135                0.465   zinc finger protein 135 
ZNF630                0.463   zinc finger protein 630 
ZNF615                0.460   zinc finger protein 615 
ZNF300                0.459   zinc finger protein 300 
ZNF605                0.457   zinc finger protein 605 
ZNF585B               0.456   zinc finger protein 585B 
ZNF432                0.455   zinc finger protein 432 
ZNF12                 0.449   zinc finger protein 12 isoform b 
ZNF41                 0.447   zinc finger protein 41 
ZNF41                 0.447   zinc finger protein 41 
ZNF470                0.443   zinc finger protein 470 
ZNF567                0.442   zinc finger protein 567 
ZNF717                0.442   zinc finger protein 717 
LOC100287163          0.441   PREDICTED: hypothetical protein XP_002343923 
ZNF420                0.439   zinc finger protein 420 
ZNF665                0.435   zinc finger protein 665 
ZNF471                0.433   zinc finger protein 471 
ZNF33B                0.433   zinc finger protein 33B 
ZNF585A               0.431   zinc finger protein 585A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press