Guide to the Human Genome
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Name: ZNF546 Sequence: fasta or formatted (836aa) NCBI GI: 194018469
Description:

zinc finger protein 546

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.0         25           1
 C cysteine            6.6         55           1
 D aspartate           1.6         13           1
 E glutamate           9.7         81           2
 F phenylalanine       4.2         35           1
 G glycine             6.3         53           1
 H histidine           8.6         72           2
 I isoleucine          5.9         49           2
 K lysine              8.3         69           1
 L leucine             6.8         57           2
 M methionine          1.2         10           1
 N asparagine          2.3         19           1
 P proline             3.7         31           2
 Q glutamine           5.1         43           2
 R arginine            7.2         60           2
 S serine              4.9         41           2
 T threonine           6.9         58           1
 V valine              2.6         22           1
 W tryptophan          0.5          4           1
 Y tyrosine            4.7         39           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 546 
ZNF780B               0.487   zinc finger protein 780B 
ZNF420                0.458   zinc finger protein 420 
ZNF160                0.450   zinc finger protein 160 
ZNF160                0.450   zinc finger protein 160 
ZNF160                0.450   zinc finger protein 160 
ZNF91                 0.448   zinc finger protein 91 
ZNF208                0.443   zinc finger protein 208 
ZNF585B               0.439   zinc finger protein 585B 
ZNF43                 0.435   zinc finger protein 43 
ZNF624                0.434   zinc finger protein 624 
ZNF836                0.434   zinc finger protein 836 
ZNF268                0.426   zinc finger protein 268 
ZNF99                 0.425   zinc finger protein 99 
ZNF347                0.425   zinc finger protein 347 
ZNF845                0.421   zinc finger protein 845 
ZNF841                0.419   zinc finger protein 841 
ZNF616                0.418   zinc finger protein 616 
ZNF721                0.414   zinc finger protein 721 
ZNF493                0.412   zinc finger protein 493 isoform 3 
LOC100292052          0.412   PREDICTED: similar to hCG1773661 
LOC100287226          0.412   PREDICTED: similar to hCG1773661 
LOC100287226          0.412   PREDICTED: hypothetical protein XP_002343677 
ZNF184                0.412   zinc finger protein 184 
ZNF585A               0.411   zinc finger protein 585A 
ZNF585A               0.411   zinc finger protein 585A 
ZNF607                0.406   zinc finger protein 607 
ZNF197                0.403   zinc finger protein 197 isoform 1 
ZNF658                0.403   zinc finger protein 658 
ZNF726                0.402   PREDICTED: zinc finger protein 726 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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