Guide to the Human Genome
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Name: ZNF33A Sequence: fasta or formatted (810aa) NCBI GI: 28274682
Description:

zinc finger protein 33A isoform b

Referenced in:

Additional Interaction Domain Families
Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt prot [811aa] zinc finger protein 33A isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.2         18           1
 C cysteine            6.2         50           1
 D aspartate           2.7         22           2
 E glutamate           9.6         78           3
 F phenylalanine       5.3         43           2
 G glycine             5.6         45           1
 H histidine           7.3         59           2
 I isoleucine          3.0         24           2
 K lysine              9.9         80           2
 L leucine             6.3         51           3
 M methionine          1.0          8           1
 N asparagine          5.4         44           2
 P proline             3.1         25           1
 Q glutamine           6.0         49           2
 R arginine            4.2         34           2
 S serine              7.9         64           3
 T threonine           6.3         51           1
 V valine              3.8         31           2
 W tryptophan          0.9          7           1
 Y tyrosine            3.3         27           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 33A isoform b 
ZNF33A                0.997   zinc finger protein 33A isoform a 
ZNF33B                0.885   zinc finger protein 33B 
LOC100287429          0.426   PREDICTED: hypothetical protein XP_002343926 isofor...
LOC100287429          0.426   PREDICTED: hypothetical protein XP_002343925 isofor...
LOC100287429          0.426   PREDICTED: hypothetical protein XP_002343927 isofor...
ZNF84                 0.426   zinc finger protein 84 
ZNF84                 0.426   zinc finger protein 84 
ZNF658                0.424   zinc finger protein 658 
ZNF717                0.422   zinc finger protein 717 
LOC100287163          0.418   PREDICTED: hypothetical protein XP_002343923 
ZNF268                0.404   zinc finger protein 268 
ZNF12                 0.393   zinc finger protein 12 isoform a 
RBAK                  0.392   RB-associated KRAB repressor 
ZNF782                0.388   zinc finger protein 782 
ZNF484                0.388   zinc finger protein 484 isoform a 
ZNF347                0.385   zinc finger protein 347 
ZNF41                 0.380   zinc finger protein 41 
ZNF41                 0.380   zinc finger protein 41 
ZNF585B               0.376   zinc finger protein 585B 
ZNF624                0.373   zinc finger protein 624 
ZNF334                0.370   zinc finger protein 334 isoform a 
ZNF12                 0.370   zinc finger protein 12 isoform b 
ZNF615                0.369   zinc finger protein 615 
ZNF845                0.367   zinc finger protein 845 
ZNF546                0.365   zinc finger protein 546 
ZNF484                0.361   zinc finger protein 484 isoform b 
ZNF91                 0.358   zinc finger protein 91 
ZNF43                 0.355   zinc finger protein 43 
ZNF616                0.355   zinc finger protein 616 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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