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Search of human proteins with 218563739
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|218563739 hypothetical protein LOC124944 isoform 3 [Homo
sapiens]
(138 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|218563739 hypothetical protein LOC124944 isoform 3 [Homo sapi... 272 7e-74
gi|52856421 hypothetical protein LOC124944 isoform 2 [Homo sapiens] 254 1e-68
gi|218563737 hypothetical protein LOC124944 isoform 1 [Homo sapi... 253 4e-68
gi|157785645 SPEG complex locus [Homo sapiens] 38 0.002
gi|157168329 formin 1 [Homo sapiens] 37 0.005
gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo sa... 37 0.005
gi|155030232 proline, glutamic acid and leucine rich protein 1 [... 37 0.005
gi|110556644 zinc finger protein, multitype 1 [Homo sapiens] 37 0.005
gi|10937869 survival of motor neuron 2, centromeric isoform d [H... 37 0.007
gi|13259527 survival of motor neuron 2, centromeric isoform a [H... 37 0.007
gi|4507091 survival of motor neuron 1, telomeric isoform d [Homo... 37 0.007
gi|53692189 adipocyte enhancer binding protein 1 precursor [Homo... 37 0.007
gi|7019535 B-cell linker isoform 1 [Homo sapiens] 35 0.015
gi|119943102 CREB binding protein isoform b [Homo sapiens] 35 0.015
gi|119943104 CREB binding protein isoform a [Homo sapiens] 35 0.015
gi|156523246 proline-rich transmembrane protein 2 [Homo sapiens] 35 0.015
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 35 0.020
gi|171543895 ataxin 2 [Homo sapiens] 35 0.020
gi|28875784 armadillo repeat containing 5 isoform b [Homo sapiens] 35 0.020
gi|157426856 armadillo repeat containing 5 isoform a [Homo sapiens] 35 0.020
gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Ho... 35 0.026
gi|68161502 Wiskott-Aldrich syndrome protein family member 1 [Ho... 35 0.026
gi|68161500 Wiskott-Aldrich syndrome protein family member 1 [Ho... 35 0.026
gi|4507913 Wiskott-Aldrich syndrome protein family member 1 [Hom... 35 0.026
gi|153070260 myristoylated alanine-rich protein kinase C substra... 35 0.026
gi|72534680 sex comb on midleg 1 isoform 1 [Homo sapiens] 35 0.026
gi|6912642 sex comb on midleg 1 isoform 2 [Homo sapiens] 35 0.026
gi|191252782 p21-activated kinase 6 [Homo sapiens] 35 0.026
gi|191252780 p21-activated kinase 6 [Homo sapiens] 35 0.026
gi|9910476 p21-activated kinase 6 [Homo sapiens] 35 0.026
>gi|218563739 hypothetical protein LOC124944 isoform 3 [Homo
sapiens]
Length = 138
Score = 272 bits (695), Expect = 7e-74
Identities = 138/138 (100%), Positives = 138/138 (100%)
Query: 1 MTSASTKVGEIFSAAGAAFTKLGELTMQLHPVADSSPAGAQIKATVKRKVYEDSGIPLPA 60
MTSASTKVGEIFSAAGAAFTKLGELTMQLHPVADSSPAGAQIKATVKRKVYEDSGIPLPA
Sbjct: 1 MTSASTKVGEIFSAAGAAFTKLGELTMQLHPVADSSPAGAQIKATVKRKVYEDSGIPLPA 60
Query: 61 ESPKKGPKKVASGVLSPPPAAPPPSSSSVPEAGGPPIKKQKADVTLSALNDSDANSDVVD 120
ESPKKGPKKVASGVLSPPPAAPPPSSSSVPEAGGPPIKKQKADVTLSALNDSDANSDVVD
Sbjct: 61 ESPKKGPKKVASGVLSPPPAAPPPSSSSVPEAGGPPIKKQKADVTLSALNDSDANSDVVD 120
Query: 121 IEGLGETPPAKKLNFDQA 138
IEGLGETPPAKKLNFDQA
Sbjct: 121 IEGLGETPPAKKLNFDQA 138
>gi|52856421 hypothetical protein LOC124944 isoform 2 [Homo sapiens]
Length = 172
Score = 254 bits (650), Expect = 1e-68
Identities = 138/172 (80%), Positives = 138/172 (80%), Gaps = 34/172 (19%)
Query: 1 MTSASTKVGEIFSAAGAAFTKLGELTMQLHPVADSSPAG--------------------- 39
MTSASTKVGEIFSAAGAAFTKLGELTMQLHPVADSSPAG
Sbjct: 1 MTSASTKVGEIFSAAGAAFTKLGELTMQLHPVADSSPAGAKWTETEIEMLRAAVKRFGDD 60
Query: 40 -------------AQIKATVKRKVYEDSGIPLPAESPKKGPKKVASGVLSPPPAAPPPSS 86
AQIKATVKRKVYEDSGIPLPAESPKKGPKKVASGVLSPPPAAPPPSS
Sbjct: 61 LNHISCVIKERTVAQIKATVKRKVYEDSGIPLPAESPKKGPKKVASGVLSPPPAAPPPSS 120
Query: 87 SSVPEAGGPPIKKQKADVTLSALNDSDANSDVVDIEGLGETPPAKKLNFDQA 138
SSVPEAGGPPIKKQKADVTLSALNDSDANSDVVDIEGLGETPPAKKLNFDQA
Sbjct: 121 SSVPEAGGPPIKKQKADVTLSALNDSDANSDVVDIEGLGETPPAKKLNFDQA 172
>gi|218563737 hypothetical protein LOC124944 isoform 1 [Homo
sapiens]
Length = 192
Score = 253 bits (646), Expect = 4e-68
Identities = 137/171 (80%), Positives = 137/171 (80%), Gaps = 34/171 (19%)
Query: 1 MTSASTKVGEIFSAAGAAFTKLGELTMQLHPVADSSPAG--------------------- 39
MTSASTKVGEIFSAAGAAFTKLGELTMQLHPVADSSPAG
Sbjct: 1 MTSASTKVGEIFSAAGAAFTKLGELTMQLHPVADSSPAGAKWTETEIEMLRAAVKRFGDD 60
Query: 40 -------------AQIKATVKRKVYEDSGIPLPAESPKKGPKKVASGVLSPPPAAPPPSS 86
AQIKATVKRKVYEDSGIPLPAESPKKGPKKVASGVLSPPPAAPPPSS
Sbjct: 61 LNHISCVIKERTVAQIKATVKRKVYEDSGIPLPAESPKKGPKKVASGVLSPPPAAPPPSS 120
Query: 87 SSVPEAGGPPIKKQKADVTLSALNDSDANSDVVDIEGLGETPPAKKLNFDQ 137
SSVPEAGGPPIKKQKADVTLSALNDSDANSDVVDIEGLGETPPAKKLNFDQ
Sbjct: 121 SSVPEAGGPPIKKQKADVTLSALNDSDANSDVVDIEGLGETPPAKKLNFDQ 171
>gi|157785645 SPEG complex locus [Homo sapiens]
Length = 3267
Score = 38.1 bits (87), Expect = 0.002
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 14/74 (18%)
Query: 60 AESPKKGPKK----------VASGVLSPPPAAPPPSSSSVPEAGGPPIKKQKADV-TLSA 108
A+ P +GP V + V SPPP AP VP AGGPP+ +KA V T+
Sbjct: 2258 AQGPSQGPAAPPSEPKPHAAVFARVASPPPGAP---EKRVPSAGGPPVLAEKARVPTVPP 2314
Query: 109 LNDSDANSDVVDIE 122
S +S + ++E
Sbjct: 2315 RPGSSLSSSIENLE 2328
Score = 34.7 bits (78), Expect = 0.026
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 8/91 (8%)
Query: 53 DSGIPLPAESPK-------KGPKKVASGVLSPPPAAPPPSSSSVPEAGGPPIKK-QKADV 104
D+G P+PA +P+ P V + +S PPA PP+ PE ++ A
Sbjct: 2878 DTGTPIPASTPQGVKPVSSSTPVYVVTSFVSAPPAPEPPAPEPPPEPTKVTVQSLSPAKE 2937
Query: 105 TLSALNDSDANSDVVDIEGLGETPPAKKLNF 135
+S+ S +S + L + PP K F
Sbjct: 2938 VVSSPGSSPRSSPRPEGTTLRQGPPQKPYTF 2968
Score = 29.6 bits (65), Expect = 0.83
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Query: 65 KGPKKVASGVLSPPPAAPPPSSSSVPEAGGPPIKKQKADVTLSALNDSD--ANSDV 118
+G + +G +PP PP + V GG P+ A V L L ++ A SDV
Sbjct: 5 RGTRGEDAGTRAPPSPGVPPKRAKVGAGGGAPVAVAGAPVFLRPLKNAAVCAGSDV 60
Score = 26.9 bits (58), Expect = 5.4
Identities = 13/45 (28%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Query: 57 PLPAESPKKGPKKVASGVLSPPPAAPPPSSSSVPEAGGPPIKKQK 101
P P+ +PK + +P P AP P+ PE P++ K
Sbjct: 2184 PKPS-TPKSAEPSATTPSDAPQPPAPQPAQDKAPEPRPEPVRASK 2227
>gi|157168329 formin 1 [Homo sapiens]
Length = 1196
Score = 37.0 bits (84), Expect = 0.005
Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Query: 54 SGIPLPAESPKKGPKKVASGVLSPPPAAPP--PSSSSVPEAGGPP 96
+G PLP P P S PPP PP P+S + P GGPP
Sbjct: 676 AGPPLPPPPPPPPPLPPPSSAGPPPPPPPPPLPNSPAPPNPGGPP 720
Score = 29.3 bits (64), Expect = 1.1
Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 4/44 (9%)
Query: 57 PLPAE----SPKKGPKKVASGVLSPPPAAPPPSSSSVPEAGGPP 96
PLP+ SP V++G PPP PPP AG PP
Sbjct: 657 PLPSGLGSLSPAPPMPPVSAGPPLPPPPPPPPPLPPPSSAGPPP 700
Score = 27.7 bits (60), Expect = 3.1
Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 7/41 (17%)
Query: 57 PLPAESPKKGPKKVASGVLSPPPAAPPPSSSSVPEAGGPPI 97
P PA P P G LSP P PP S+ GPP+
Sbjct: 647 PPPASIPPPPPLPSGLGSLSPAPPMPPVSA-------GPPL 680
Score = 26.2 bits (56), Expect = 9.2
Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 3/46 (6%)
Query: 54 SGIPLPAESPKKGPKKVASGVLSPP---PAAPPPSSSSVPEAGGPP 96
SG+ + +P P + PP P PPPSS+ P PP
Sbjct: 660 SGLGSLSPAPPMPPVSAGPPLPPPPPPPPPLPPPSSAGPPPPPPPP 705
>gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo
sapiens]
Length = 699
Score = 37.0 bits (84), Expect = 0.005
Identities = 34/118 (28%), Positives = 52/118 (44%), Gaps = 13/118 (11%)
Query: 26 TMQLHPVADSSPAGAQIKATVKRKVYEDSGIPLPAESPKKGPKKVASGVLS--PPPAAPP 83
T+ V +P A T K EDS E +K P K G S PPP+APP
Sbjct: 242 TVPKKQVVAKAPVKAATTPTRKSSSSEDSSSD--EEEEQKKPMKNKPGPYSSVPPPSAPP 299
Query: 84 PSSSSVPEAGGPPIKKQK-ADVTLSALNDSDANSD--------VVDIEGLGETPPAKK 132
P S + ++KQ+ + + + ++SD++S+ V + + PPAKK
Sbjct: 300 PKKSLGTQPPKKAVEKQQPVESSEDSSDESDSSSEEEKKPPTKAVVSKATTKPPPAKK 357
Score = 27.7 bits (60), Expect = 3.1
Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Query: 52 EDSGIPLPAESPKKGPKKVASGVLSPPPAAPPPSSSSVPEAGGPPIKKQKADVTLSALND 111
+D PA + K K A V + PA P ++ P GG + +KAD + S
Sbjct: 373 DDEAPSKPAGTTKNSSNKPA--VTTKSPAVKPAAAPKQPVGGGQKLLTRKADSSSSEEES 430
Query: 112 SDANSD 117
S + +
Sbjct: 431 SSSEEE 436
Score = 26.9 bits (58), Expect = 5.4
Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 16/72 (22%)
Query: 64 KKGPKKVASGVLSPPPAAPPPSSSSVPEAGGPPIKKQKADVTLSALNDSDANSDVVDIEG 123
KK P+KVA G PA+ KK KA+ + S+ +D + + ++G
Sbjct: 491 KKKPQKVAGGAAPSKPAS---------------AKKGKAESSNSSSSDDSSEEEEEKLKG 535
Query: 124 LGE-TPPAKKLN 134
G P A K N
Sbjct: 536 KGSPRPQAPKAN 547
>gi|155030232 proline, glutamic acid and leucine rich protein 1
[Homo sapiens]
Length = 1130
Score = 37.0 bits (84), Expect = 0.005
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 17/74 (22%)
Query: 57 PLPA-ESPKKGPKKVASGVLSPPPAAPPPSSSSV------------PEAGGPPIKKQKAD 103
P+PA E P++ P A G L PPP PPP V P GGPP ++ D
Sbjct: 822 PVPAKEEPEELP--AAPGPLPPPPPPPPPVPGPVTLPPPQLVPEGTPGGGGPPALEE--D 877
Query: 104 VTLSALNDSDANSD 117
+T+ +N SD +
Sbjct: 878 LTVININSSDEEEE 891
Score = 30.4 bits (67), Expect = 0.49
Identities = 22/73 (30%), Positives = 28/73 (38%), Gaps = 8/73 (10%)
Query: 57 PLPAESPKKGPKKVASGVLSPPPAAPPPSSSSVPEAGGPPIKKQKADVTLSALNDSDANS 116
P P +P P V S P A P PS+ +P AG P + T AN
Sbjct: 657 PSPFRAPPFHPPGPMPSVGSMPSAGPMPSAGPMPSAGPVPSARPGPPTT--------ANH 708
Query: 117 DVVDIEGLGETPP 129
+ + GL PP
Sbjct: 709 LGLSVPGLVSVPP 721
Score = 26.2 bits (56), Expect = 9.2
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 3/37 (8%)
Query: 75 LSPPP---AAPPPSSSSVPEAGGPPIKKQKADVTLSA 108
L PPP A PPP + + P PP+ ++ L A
Sbjct: 798 LPPPPPSGATPPPIAPTGPPTASPPVPAKEEPEELPA 834
>gi|110556644 zinc finger protein, multitype 1 [Homo sapiens]
Length = 1006
Score = 37.0 bits (84), Expect = 0.005
Identities = 21/47 (44%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
Query: 54 SGIPLPAESPKKGPKKVASGVLSP----PPAAPPPSSSSVPEAGGPP 96
S P PA SP+ G + G L P PP PPPS ++ PEA PP
Sbjct: 901 SPAPAPAASPQPGSRGPRDG-LGPEPQEPPPGPPPSPAAAPEAVPPP 946
>gi|10937869 survival of motor neuron 2, centromeric isoform d [Homo
sapiens]
Length = 294
Score = 36.6 bits (83), Expect = 0.007
Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 5/63 (7%)
Query: 57 PLPAESPKKGPKKVASGVLSPPPAAPPP-----SSSSVPEAGGPPIKKQKADVTLSALND 111
P P P+ GP K PPP PPP S P GPPI + +L+D
Sbjct: 197 PPPMPGPRLGPGKPGLKFNGPPPPPPPPPPHLLSCWLPPFPSGPPIIPPPPPICPDSLDD 256
Query: 112 SDA 114
+DA
Sbjct: 257 ADA 259
>gi|13259527 survival of motor neuron 2, centromeric isoform a [Homo
sapiens]
Length = 282
Score = 36.6 bits (83), Expect = 0.007
Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 5/63 (7%)
Query: 57 PLPAESPKKGPKKVASGVLSPPPAAPPP-----SSSSVPEAGGPPIKKQKADVTLSALND 111
P P P+ GP K PPP PPP S P GPPI + +L+D
Sbjct: 197 PPPMPGPRLGPGKPGLKFNGPPPPPPPPPPHLLSCWLPPFPSGPPIIPPPPPICPDSLDD 256
Query: 112 SDA 114
+DA
Sbjct: 257 ADA 259
>gi|4507091 survival of motor neuron 1, telomeric isoform d [Homo
sapiens]
Length = 294
Score = 36.6 bits (83), Expect = 0.007
Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 5/63 (7%)
Query: 57 PLPAESPKKGPKKVASGVLSPPPAAPPP-----SSSSVPEAGGPPIKKQKADVTLSALND 111
P P P+ GP K PPP PPP S P GPPI + +L+D
Sbjct: 197 PPPMPGPRLGPGKPGLKFNGPPPPPPPPPPHLLSCWLPPFPSGPPIIPPPPPICPDSLDD 256
Query: 112 SDA 114
+DA
Sbjct: 257 ADA 259
>gi|53692189 adipocyte enhancer binding protein 1 precursor [Homo
sapiens]
Length = 1158
Score = 36.6 bits (83), Expect = 0.007
Identities = 27/78 (34%), Positives = 32/78 (41%), Gaps = 11/78 (14%)
Query: 31 PVADSSPAGAQIKATVKRKVYEDSGIPLPAESPKKGPKKVASG----VLSPP-----PAA 81
P A P KAT K K P E P K KK SG +L+P P
Sbjct: 125 PKATKKPKEKPPKATKKPKEKPPKATKKPKEKPPKATKKPPSGKRPPILAPSETLEWPLP 184
Query: 82 PPPS--SSSVPEAGGPPI 97
PPPS +P+ GG P+
Sbjct: 185 PPPSPGPEELPQEGGAPL 202
Score = 26.9 bits (58), Expect = 5.4
Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 5/58 (8%)
Query: 48 RKVYEDSGIPLPAESPKKGPKKVASGVLSPP-----PAAPPPSSSSVPEAGGPPIKKQ 100
+K +D G +P ES + P+ G PP P PP ++ P+ P K+
Sbjct: 95 KKGKKDKGPKVPKESLEGSPRPPKKGKEKPPKATKKPKEKPPKATKKPKEKPPKATKK 152
>gi|7019535 B-cell linker isoform 1 [Homo sapiens]
Length = 456
Score = 35.4 bits (80), Expect = 0.015
Identities = 27/84 (32%), Positives = 31/84 (36%), Gaps = 5/84 (5%)
Query: 29 LHPVADSSPAGAQIKATVKRKVYEDSGIPLPAESPKKGPKKVASGVLSPPPAAPPPSSSS 88
+HP SSP + V R +S P G A SPPPAAP P
Sbjct: 190 IHPTESSSPPPEKAPM-VNRSTKPNSSTPASPPGTASGRNSGAWETKSPPPAAPSP---- 244
Query: 89 VPEAGGPPIKKQKADVTLSALNDS 112
+P AG P K S N S
Sbjct: 245 LPRAGKKPTTPLKTTPVASQQNAS 268
>gi|119943102 CREB binding protein isoform b [Homo sapiens]
Length = 2404
Score = 35.4 bits (80), Expect = 0.015
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 44 ATVKRKVYEDSGIPLPAESPKKGPKKVASGVLSP-PPAAPPPSSSSVPEAGGPPIKKQKA 102
AT+ + +P P +P P + S +P PPA P PS S+ AG P + + +
Sbjct: 1832 ATMNTRNVPQQSLPSPTSAPPGTPTQQPSTPQTPQPPAQPQPSPVSMSPAGFPSVARTQP 1891
Query: 103 DVTLS 107
T+S
Sbjct: 1892 PTTVS 1896
>gi|119943104 CREB binding protein isoform a [Homo sapiens]
Length = 2442
Score = 35.4 bits (80), Expect = 0.015
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 44 ATVKRKVYEDSGIPLPAESPKKGPKKVASGVLSP-PPAAPPPSSSSVPEAGGPPIKKQKA 102
AT+ + +P P +P P + S +P PPA P PS S+ AG P + + +
Sbjct: 1870 ATMNTRNVPQQSLPSPTSAPPGTPTQQPSTPQTPQPPAQPQPSPVSMSPAGFPSVARTQP 1929
Query: 103 DVTLS 107
T+S
Sbjct: 1930 PTTVS 1934
>gi|156523246 proline-rich transmembrane protein 2 [Homo sapiens]
Length = 340
Score = 35.4 bits (80), Expect = 0.015
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 54 SGIPLPAESPKKGPKKVASGVLSPPPAAPPPSSSSVPEAGGPPIKKQKADVTLSALNDSD 113
+G+P E+P+ GP A+ V S P A P ++ P G Q D++LS +S
Sbjct: 39 AGVPDQPEAPQPGPNTTAAPVDSGPKAGLAPETTETP--AGASETAQATDLSLSPGGESK 96
Query: 114 ANSDVVD 120
AN D
Sbjct: 97 ANCSPED 103
Score = 26.6 bits (57), Expect = 7.0
Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 9/60 (15%)
Query: 37 PAGAQIKATVKRKVYEDSGIPLPAESPKKGPKKVASGVLSPPPAAPPPSSSSVPEAGGPP 96
P + +V K + +PL A ++GP +P P +PP S S P G PP
Sbjct: 166 PTPEILSESVGEKQENGAVVPLQAGDGEEGP--------APEPHSPP-SKKSPPANGAPP 216
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 35.0 bits (79), Expect = 0.020
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 8/71 (11%)
Query: 31 PVADSSPAGAQIKATVKRKVYEDSGIPLPAESPKKGPKKVASGVLSPPPAAPP-----PS 85
P+A SP+G + + +++ PLPA P P + P P+APP PS
Sbjct: 303 PLATPSPSGTKARPVPPP---DNAATPLPATLPPSPPLATPLPLAPPSPSAPPSLQTLPS 359
Query: 86 SSSVPEAGGPP 96
+ P + PP
Sbjct: 360 PPATPPSQAPP 370
Score = 30.0 bits (66), Expect = 0.63
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 5/45 (11%)
Query: 55 GIPLPAES-----PKKGPKKVASGVLSPPPAAPPPSSSSVPEAGG 94
G+P PA S P +GP+K S P P++ P AGG
Sbjct: 188 GLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGG 232
Score = 29.3 bits (64), Expect = 1.1
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Query: 38 AGAQIKATVKRKVYEDSGIPLPAESPKKGPKKVASGVLSPPPAAPPPSSSSVPEAGGPPI 97
AGA + + + G +P +P+ GP + ++G S PA+ PP+S A PP
Sbjct: 50 AGAVGRKPLAERAGGIGGATIPESAPRAGPTR-SAGTSSRNPASRPPASGRGERA--PPA 106
Query: 98 K 98
K
Sbjct: 107 K 107
Score = 28.9 bits (63), Expect = 1.4
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Query: 60 AESPKKGPKKVASGVLS---PPPAAPPPSSSSVPEAGGPP 96
A P + P +A+ L PPA+PP S S+ P PP
Sbjct: 689 ATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPP 728
Score = 27.7 bits (60), Expect = 3.1
Identities = 14/36 (38%), Positives = 17/36 (47%)
Query: 55 GIPLPAESPKKGPKKVASGVLSPPPAAPPPSSSSVP 90
G+P P SP P A L+ PP PPS + P
Sbjct: 605 GLPSPPLSPLATPPPQAPPXLALPPLQAPPSPPASP 640
Score = 27.7 bits (60), Expect = 3.1
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Query: 60 AESPKKGPKKVASGVLS---PPPAAPPPSSSSVPEAGGPPI 97
A P + P +A+ L PPA+PP S S+ P PP+
Sbjct: 720 ATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPL 760
Score = 26.9 bits (58), Expect = 5.4
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 78 PPAAPPPSSSSVPEAGGPP 96
PPA+PP S S+ P + PP
Sbjct: 679 PPASPPVSPSATPPSQAPP 697
Score = 26.6 bits (57), Expect = 7.0
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
Query: 57 PLPAESPKKGPKKVASGVLSPPPAAPPPSSS 87
P P +P P + S + +PPP APP +S
Sbjct: 573 PSPLTTP---PPETPSSIATPPPQAPPALAS 600
Score = 26.2 bits (56), Expect = 9.2
Identities = 14/39 (35%), Positives = 14/39 (35%)
Query: 57 PLPAESPKKGPKKVASGVLSPPPAAPPPSSSSVPEAGGP 95
P P SP P PP AAPP P A P
Sbjct: 708 PSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPP 746
>gi|171543895 ataxin 2 [Homo sapiens]
Length = 1313
Score = 35.0 bits (79), Expect = 0.020
Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Query: 23 GELTMQLHPVADSSPAGAQIKATVKRKVYEDSGIPLPAESPKKGPKKVASGVLSPPPAAP 82
G LTM L P Q + +++ + P A K G SG+L+ P AAP
Sbjct: 157 GPLTMSLKPQQQQQQQQQQQQQQQQQQQQQQQPPPAAANVRKPG----GSGLLASPAAAP 212
Query: 83 PPSSSSV 89
PSSSSV
Sbjct: 213 SPSSSSV 219
>gi|28875784 armadillo repeat containing 5 isoform b [Homo sapiens]
Length = 725
Score = 35.0 bits (79), Expect = 0.020
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 63 PKKGPKKVASGVLSPPPAAPPPSSSSVPEAGGPPIKKQKA-DVTLSALND 111
P P ASG SP PA+ P S+ + PP++ +K D+ LS L D
Sbjct: 89 PGSAPSSAASGASSPAPASGPAPSAVSSSSPTPPVRLRKTLDLALSILAD 138
>gi|157426856 armadillo repeat containing 5 isoform a [Homo sapiens]
Length = 935
Score = 35.0 bits (79), Expect = 0.020
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 63 PKKGPKKVASGVLSPPPAAPPPSSSSVPEAGGPPIKKQKA-DVTLSALND 111
P P ASG SP PA+ P S+ + PP++ +K D+ LS L D
Sbjct: 89 PGSAPSSAASGASSPAPASGPAPSAVSSSSPTPPVRLRKTLDLALSILAD 138
>gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 34.7 bits (78), Expect = 0.026
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 54 SGIPLPAESPKKGPKKVASGVL--SPPPAAPPPSSSSVPEAGGPPI 97
+ + PA P P ++A GVL +PPP APP S P A P+
Sbjct: 361 TALQAPAVPPPPAPLQIAPGVLHPAPPPIAPPLVQPSPPVARAAPV 406
>gi|68161502 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 34.7 bits (78), Expect = 0.026
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 54 SGIPLPAESPKKGPKKVASGVL--SPPPAAPPPSSSSVPEAGGPPI 97
+ + PA P P ++A GVL +PPP APP S P A P+
Sbjct: 361 TALQAPAVPPPPAPLQIAPGVLHPAPPPIAPPLVQPSPPVARAAPV 406
>gi|68161500 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 34.7 bits (78), Expect = 0.026
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 54 SGIPLPAESPKKGPKKVASGVL--SPPPAAPPPSSSSVPEAGGPPI 97
+ + PA P P ++A GVL +PPP APP S P A P+
Sbjct: 361 TALQAPAVPPPPAPLQIAPGVLHPAPPPIAPPLVQPSPPVARAAPV 406
>gi|4507913 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 34.7 bits (78), Expect = 0.026
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 54 SGIPLPAESPKKGPKKVASGVL--SPPPAAPPPSSSSVPEAGGPPI 97
+ + PA P P ++A GVL +PPP APP S P A P+
Sbjct: 361 TALQAPAVPPPPAPLQIAPGVLHPAPPPIAPPLVQPSPPVARAAPV 406
>gi|153070260 myristoylated alanine-rich protein kinase C substrate
[Homo sapiens]
Length = 332
Score = 34.7 bits (78), Expect = 0.026
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 6/68 (8%)
Query: 34 DSSPAGAQIKATVKRKVYEDSGIPLPAESPKKGPKKVASGVLSPPPAAP-PPSSSSVPEA 92
D+SPA A+ A K ++ + P + K+ P SG SP A P++++ PEA
Sbjct: 44 DASPAAAESGA--KEELQANGSAPA---ADKEEPAAAGSGAASPSAAEKGEPAAAAAPEA 98
Query: 93 GGPPIKKQ 100
G P++K+
Sbjct: 99 GASPVEKE 106
>gi|72534680 sex comb on midleg 1 isoform 1 [Homo sapiens]
Length = 660
Score = 34.7 bits (78), Expect = 0.026
Identities = 28/109 (25%), Positives = 46/109 (42%), Gaps = 19/109 (17%)
Query: 26 TMQLHPVADSSPAGAQIKATVKRKVYEDSGIPLPAESPKKGPKKVASGVLSPPPAA---- 81
T+ HP++ S +K KR PK G K+ +L+PPPA+
Sbjct: 287 TLISHPISAPSKTAEPLKFPKKR-------------GPKPGSKRKPRTLLNPPPASPTTS 333
Query: 82 -PPPSSSSVP-EAGGPPIKKQKADVTLSALNDSDANSDVVDIEGLGETP 128
P P +S+VP +A P +A LN + + +D + + + P
Sbjct: 334 TPEPDTSTVPQDAATIPSSAMQAPTVCIYLNKNGSTGPHLDKKKVQQLP 382
>gi|6912642 sex comb on midleg 1 isoform 2 [Homo sapiens]
Length = 591
Score = 34.7 bits (78), Expect = 0.026
Identities = 28/109 (25%), Positives = 46/109 (42%), Gaps = 19/109 (17%)
Query: 26 TMQLHPVADSSPAGAQIKATVKRKVYEDSGIPLPAESPKKGPKKVASGVLSPPPAA---- 81
T+ HP++ S +K KR PK G K+ +L+PPPA+
Sbjct: 240 TLISHPISAPSKTAEPLKFPKKR-------------GPKPGSKRKPRTLLNPPPASPTTS 286
Query: 82 -PPPSSSSVP-EAGGPPIKKQKADVTLSALNDSDANSDVVDIEGLGETP 128
P P +S+VP +A P +A LN + + +D + + + P
Sbjct: 287 TPEPDTSTVPQDAATIPSSAMQAPTVCIYLNKNGSTGPHLDKKKVQQLP 335
>gi|191252782 p21-activated kinase 6 [Homo sapiens]
Length = 681
Score = 34.7 bits (78), Expect = 0.026
Identities = 25/94 (26%), Positives = 39/94 (41%), Gaps = 14/94 (14%)
Query: 31 PVADSSPAGAQIKATVKRKVYEDSGIPLPAESPKKGPKKVASGVLSPPPAAPPPSSSSVP 90
P + SP+ ++++KR+++ + A +P K PPP + P SS P
Sbjct: 241 PGGEGSPSPKTRESSLKRRLFRSMFLSTAATAPPSSSKP------GPPPQSKPNSSFRPP 294
Query: 91 EAGGPPIKKQKADV--------TLSALNDSDANS 116
+ PP KA T S L SD +S
Sbjct: 295 QKDNPPSLVAKAQSLPSDQPVGTFSPLTTSDTSS 328
>gi|191252780 p21-activated kinase 6 [Homo sapiens]
Length = 681
Score = 34.7 bits (78), Expect = 0.026
Identities = 25/94 (26%), Positives = 39/94 (41%), Gaps = 14/94 (14%)
Query: 31 PVADSSPAGAQIKATVKRKVYEDSGIPLPAESPKKGPKKVASGVLSPPPAAPPPSSSSVP 90
P + SP+ ++++KR+++ + A +P K PPP + P SS P
Sbjct: 241 PGGEGSPSPKTRESSLKRRLFRSMFLSTAATAPPSSSKP------GPPPQSKPNSSFRPP 294
Query: 91 EAGGPPIKKQKADV--------TLSALNDSDANS 116
+ PP KA T S L SD +S
Sbjct: 295 QKDNPPSLVAKAQSLPSDQPVGTFSPLTTSDTSS 328
>gi|9910476 p21-activated kinase 6 [Homo sapiens]
Length = 681
Score = 34.7 bits (78), Expect = 0.026
Identities = 25/94 (26%), Positives = 39/94 (41%), Gaps = 14/94 (14%)
Query: 31 PVADSSPAGAQIKATVKRKVYEDSGIPLPAESPKKGPKKVASGVLSPPPAAPPPSSSSVP 90
P + SP+ ++++KR+++ + A +P K PPP + P SS P
Sbjct: 241 PGGEGSPSPKTRESSLKRRLFRSMFLSTAATAPPSSSKP------GPPPQSKPNSSFRPP 294
Query: 91 EAGGPPIKKQKADV--------TLSALNDSDANS 116
+ PP KA T S L SD +S
Sbjct: 295 QKDNPPSLVAKAQSLPSDQPVGTFSPLTTSDTSS 328
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.305 0.125 0.344
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,586,235
Number of Sequences: 37866
Number of extensions: 401111
Number of successful extensions: 5832
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 353
Number of HSP's successfully gapped in prelim test: 484
Number of HSP's that attempted gapping in prelim test: 3570
Number of HSP's gapped (non-prelim): 2333
length of query: 138
length of database: 18,247,518
effective HSP length: 91
effective length of query: 47
effective length of database: 14,801,712
effective search space: 695680464
effective search space used: 695680464
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.