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Search of human proteins with 218563737
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|218563737 hypothetical protein LOC124944 isoform 1 [Homo
sapiens]
(192 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|218563737 hypothetical protein LOC124944 isoform 1 [Homo sapi... 379 e-106
gi|52856421 hypothetical protein LOC124944 isoform 2 [Homo sapiens] 338 2e-93
gi|218563739 hypothetical protein LOC124944 isoform 3 [Homo sapi... 253 7e-68
gi|27734799 REST corepressor 2 [Homo sapiens] 39 0.004
gi|156523246 proline-rich transmembrane protein 2 [Homo sapiens] 39 0.004
gi|157785645 SPEG complex locus [Homo sapiens] 38 0.005
gi|157168329 formin 1 [Homo sapiens] 37 0.010
gi|155030232 proline, glutamic acid and leucine rich protein 1 [... 37 0.010
gi|110556644 zinc finger protein, multitype 1 [Homo sapiens] 37 0.010
gi|10937869 survival of motor neuron 2, centromeric isoform d [H... 37 0.013
gi|13259527 survival of motor neuron 2, centromeric isoform a [H... 37 0.013
gi|4507091 survival of motor neuron 1, telomeric isoform d [Homo... 37 0.013
gi|119943102 CREB binding protein isoform b [Homo sapiens] 35 0.030
gi|119943104 CREB binding protein isoform a [Homo sapiens] 35 0.030
gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo sa... 35 0.039
gi|191252782 p21-activated kinase 6 [Homo sapiens] 35 0.039
gi|191252780 p21-activated kinase 6 [Homo sapiens] 35 0.039
gi|9910476 p21-activated kinase 6 [Homo sapiens] 35 0.039
gi|15812226 transcriptional regulating factor 1 [Homo sapiens] 35 0.039
gi|139394579 zinc finger and BTB domain containing 40 [Homo sapi... 35 0.039
gi|139394556 zinc finger and BTB domain containing 40 [Homo sapi... 35 0.039
gi|28875784 armadillo repeat containing 5 isoform b [Homo sapiens] 35 0.039
gi|157426856 armadillo repeat containing 5 isoform a [Homo sapiens] 35 0.039
gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Ho... 35 0.051
gi|68161502 Wiskott-Aldrich syndrome protein family member 1 [Ho... 35 0.051
gi|68161500 Wiskott-Aldrich syndrome protein family member 1 [Ho... 35 0.051
gi|4507913 Wiskott-Aldrich syndrome protein family member 1 [Hom... 35 0.051
gi|163965366 nascent polypeptide-associated complex alpha subuni... 35 0.051
gi|7661892 REST corepressor 1 [Homo sapiens] 34 0.067
gi|166235136 seizure related 6 homolog (mouse)-like 2 isoform 2 ... 34 0.067
>gi|218563737 hypothetical protein LOC124944 isoform 1 [Homo
sapiens]
Length = 192
Score = 379 bits (973), Expect = e-106
Identities = 192/192 (100%), Positives = 192/192 (100%)
Query: 1 MTSASTKVGEIFSAAGAAFTKLGELTMQLHPVADSSPAGAKWTETEIEMLRAAVKRFGDD 60
MTSASTKVGEIFSAAGAAFTKLGELTMQLHPVADSSPAGAKWTETEIEMLRAAVKRFGDD
Sbjct: 1 MTSASTKVGEIFSAAGAAFTKLGELTMQLHPVADSSPAGAKWTETEIEMLRAAVKRFGDD 60
Query: 61 LNHISCVIKERTVAQIKATVKRKVYEDSGIPLPAESPKKGPKKVASGVLSPPPAAPPPSS 120
LNHISCVIKERTVAQIKATVKRKVYEDSGIPLPAESPKKGPKKVASGVLSPPPAAPPPSS
Sbjct: 61 LNHISCVIKERTVAQIKATVKRKVYEDSGIPLPAESPKKGPKKVASGVLSPPPAAPPPSS 120
Query: 121 SSVPEAGGPPIKKQKADVTLSALNDSDANSDVVDIEGLGETPPAKKLNFDQDSLTLDSGL 180
SSVPEAGGPPIKKQKADVTLSALNDSDANSDVVDIEGLGETPPAKKLNFDQDSLTLDSGL
Sbjct: 121 SSVPEAGGPPIKKQKADVTLSALNDSDANSDVVDIEGLGETPPAKKLNFDQDSLTLDSGL 180
Query: 181 LMTSADPPLLSC 192
LMTSADPPLLSC
Sbjct: 181 LMTSADPPLLSC 192
>gi|52856421 hypothetical protein LOC124944 isoform 2 [Homo sapiens]
Length = 172
Score = 338 bits (867), Expect = 2e-93
Identities = 171/171 (100%), Positives = 171/171 (100%)
Query: 1 MTSASTKVGEIFSAAGAAFTKLGELTMQLHPVADSSPAGAKWTETEIEMLRAAVKRFGDD 60
MTSASTKVGEIFSAAGAAFTKLGELTMQLHPVADSSPAGAKWTETEIEMLRAAVKRFGDD
Sbjct: 1 MTSASTKVGEIFSAAGAAFTKLGELTMQLHPVADSSPAGAKWTETEIEMLRAAVKRFGDD 60
Query: 61 LNHISCVIKERTVAQIKATVKRKVYEDSGIPLPAESPKKGPKKVASGVLSPPPAAPPPSS 120
LNHISCVIKERTVAQIKATVKRKVYEDSGIPLPAESPKKGPKKVASGVLSPPPAAPPPSS
Sbjct: 61 LNHISCVIKERTVAQIKATVKRKVYEDSGIPLPAESPKKGPKKVASGVLSPPPAAPPPSS 120
Query: 121 SSVPEAGGPPIKKQKADVTLSALNDSDANSDVVDIEGLGETPPAKKLNFDQ 171
SSVPEAGGPPIKKQKADVTLSALNDSDANSDVVDIEGLGETPPAKKLNFDQ
Sbjct: 121 SSVPEAGGPPIKKQKADVTLSALNDSDANSDVVDIEGLGETPPAKKLNFDQ 171
>gi|218563739 hypothetical protein LOC124944 isoform 3 [Homo
sapiens]
Length = 138
Score = 253 bits (646), Expect = 7e-68
Identities = 137/171 (80%), Positives = 137/171 (80%), Gaps = 34/171 (19%)
Query: 1 MTSASTKVGEIFSAAGAAFTKLGELTMQLHPVADSSPAGAKWTETEIEMLRAAVKRFGDD 60
MTSASTKVGEIFSAAGAAFTKLGELTMQLHPVADSSPAG
Sbjct: 1 MTSASTKVGEIFSAAGAAFTKLGELTMQLHPVADSSPAG--------------------- 39
Query: 61 LNHISCVIKERTVAQIKATVKRKVYEDSGIPLPAESPKKGPKKVASGVLSPPPAAPPPSS 120
AQIKATVKRKVYEDSGIPLPAESPKKGPKKVASGVLSPPPAAPPPSS
Sbjct: 40 -------------AQIKATVKRKVYEDSGIPLPAESPKKGPKKVASGVLSPPPAAPPPSS 86
Query: 121 SSVPEAGGPPIKKQKADVTLSALNDSDANSDVVDIEGLGETPPAKKLNFDQ 171
SSVPEAGGPPIKKQKADVTLSALNDSDANSDVVDIEGLGETPPAKKLNFDQ
Sbjct: 87 SSVPEAGGPPIKKQKADVTLSALNDSDANSDVVDIEGLGETPPAKKLNFDQ 137
>gi|27734799 REST corepressor 2 [Homo sapiens]
Length = 523
Score = 38.5 bits (88), Expect = 0.004
Identities = 32/139 (23%), Positives = 54/139 (38%), Gaps = 36/139 (25%)
Query: 29 LHPVADSSPAGAKWTETEIEMLRAAVKRFGDDLNHISCVIKERTVAQIK---ATVKRKVY 85
L P ++ ++WT E + A++R+G D I+ VI +T+ Q+K + +R+
Sbjct: 319 LRPPEANTKFNSRWTTDEQLLAVQAIRRYGKDFGAIAEVIGNKTLTQVKTFFVSYRRRFN 378
Query: 86 EDS-------------GIPLPAESPKKGPKKVASGV--------------------LSPP 112
+ G P+P E ++G A + +PP
Sbjct: 379 LEEVLQEWEAEQDGAPGAPVPMEEARRGAPLPAPALEEDDEVQITSVSTSVPRSVPPAPP 438
Query: 113 PAAPPPSSSSVPEAGGPPI 131
P PP S S P PP+
Sbjct: 439 PPPPPTSLSQPPPLLRPPL 457
>gi|156523246 proline-rich transmembrane protein 2 [Homo sapiens]
Length = 340
Score = 38.5 bits (88), Expect = 0.004
Identities = 31/102 (30%), Positives = 43/102 (42%), Gaps = 9/102 (8%)
Query: 88 SGIPLPAESPKKGPKKVASGVLSPPPAAPPPSSSSVPEAGGPPIKKQKADVTLSALNDSD 147
+G+P E+P+ GP A+ V S P A P ++ P G Q D++LS +S
Sbjct: 39 AGVPDQPEAPQPGPNTTAAPVDSGPKAGLAPETTETP--AGASETAQATDLSLSPGGESK 96
Query: 148 ANSDVVD-IEGLGETPPAKKLNFDQDSLTLDSGLLMTSADPP 188
AN D + P K T D G + SA PP
Sbjct: 97 ANCSPEDPCQETVSKPEVSK------EATADQGSRLESAAPP 132
>gi|157785645 SPEG complex locus [Homo sapiens]
Length = 3267
Score = 38.1 bits (87), Expect = 0.005
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 14/74 (18%)
Query: 94 AESPKKGPKK----------VASGVLSPPPAAPPPSSSSVPEAGGPPIKKQKADV-TLSA 142
A+ P +GP V + V SPPP AP VP AGGPP+ +KA V T+
Sbjct: 2258 AQGPSQGPAAPPSEPKPHAAVFARVASPPPGAP---EKRVPSAGGPPVLAEKARVPTVPP 2314
Query: 143 LNDSDANSDVVDIE 156
S +S + ++E
Sbjct: 2315 RPGSSLSSSIENLE 2328
Score = 34.7 bits (78), Expect = 0.051
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 8/91 (8%)
Query: 87 DSGIPLPAESPK-------KGPKKVASGVLSPPPAAPPPSSSSVPEAGGPPIKK-QKADV 138
D+G P+PA +P+ P V + +S PPA PP+ PE ++ A
Sbjct: 2878 DTGTPIPASTPQGVKPVSSSTPVYVVTSFVSAPPAPEPPAPEPPPEPTKVTVQSLSPAKE 2937
Query: 139 TLSALNDSDANSDVVDIEGLGETPPAKKLNF 169
+S+ S +S + L + PP K F
Sbjct: 2938 VVSSPGSSPRSSPRPEGTTLRQGPPQKPYTF 2968
Score = 29.6 bits (65), Expect = 1.6
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Query: 99 KGPKKVASGVLSPPPAAPPPSSSSVPEAGGPPIKKQKADVTLSALNDSD--ANSDV 152
+G + +G +PP PP + V GG P+ A V L L ++ A SDV
Sbjct: 5 RGTRGEDAGTRAPPSPGVPPKRAKVGAGGGAPVAVAGAPVFLRPLKNAAVCAGSDV 60
>gi|157168329 formin 1 [Homo sapiens]
Length = 1196
Score = 37.0 bits (84), Expect = 0.010
Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Query: 88 SGIPLPAESPKKGPKKVASGVLSPPPAAPP--PSSSSVPEAGGPP 130
+G PLP P P S PPP PP P+S + P GGPP
Sbjct: 676 AGPPLPPPPPPPPPLPPPSSAGPPPPPPPPPLPNSPAPPNPGGPP 720
Score = 29.3 bits (64), Expect = 2.2
Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 4/44 (9%)
Query: 91 PLPAE----SPKKGPKKVASGVLSPPPAAPPPSSSSVPEAGGPP 130
PLP+ SP V++G PPP PPP AG PP
Sbjct: 657 PLPSGLGSLSPAPPMPPVSAGPPLPPPPPPPPPLPPPSSAGPPP 700
Score = 27.7 bits (60), Expect = 6.3
Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 7/41 (17%)
Query: 91 PLPAESPKKGPKKVASGVLSPPPAAPPPSSSSVPEAGGPPI 131
P PA P P G LSP P PP S+ GPP+
Sbjct: 647 PPPASIPPPPPLPSGLGSLSPAPPMPPVSA-------GPPL 680
>gi|155030232 proline, glutamic acid and leucine rich protein 1
[Homo sapiens]
Length = 1130
Score = 37.0 bits (84), Expect = 0.010
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 17/74 (22%)
Query: 91 PLPA-ESPKKGPKKVASGVLSPPPAAPPPSSSSV------------PEAGGPPIKKQKAD 137
P+PA E P++ P A G L PPP PPP V P GGPP ++ D
Sbjct: 822 PVPAKEEPEELP--AAPGPLPPPPPPPPPVPGPVTLPPPQLVPEGTPGGGGPPALEE--D 877
Query: 138 VTLSALNDSDANSD 151
+T+ +N SD +
Sbjct: 878 LTVININSSDEEEE 891
Score = 30.4 bits (67), Expect = 0.97
Identities = 22/73 (30%), Positives = 28/73 (38%), Gaps = 8/73 (10%)
Query: 91 PLPAESPKKGPKKVASGVLSPPPAAPPPSSSSVPEAGGPPIKKQKADVTLSALNDSDANS 150
P P +P P V S P A P PS+ +P AG P + T AN
Sbjct: 657 PSPFRAPPFHPPGPMPSVGSMPSAGPMPSAGPMPSAGPVPSARPGPPTT--------ANH 708
Query: 151 DVVDIEGLGETPP 163
+ + GL PP
Sbjct: 709 LGLSVPGLVSVPP 721
>gi|110556644 zinc finger protein, multitype 1 [Homo sapiens]
Length = 1006
Score = 37.0 bits (84), Expect = 0.010
Identities = 21/47 (44%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
Query: 88 SGIPLPAESPKKGPKKVASGVLSP----PPAAPPPSSSSVPEAGGPP 130
S P PA SP+ G + G L P PP PPPS ++ PEA PP
Sbjct: 901 SPAPAPAASPQPGSRGPRDG-LGPEPQEPPPGPPPSPAAAPEAVPPP 946
>gi|10937869 survival of motor neuron 2, centromeric isoform d [Homo
sapiens]
Length = 294
Score = 36.6 bits (83), Expect = 0.013
Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 5/63 (7%)
Query: 91 PLPAESPKKGPKKVASGVLSPPPAAPPP-----SSSSVPEAGGPPIKKQKADVTLSALND 145
P P P+ GP K PPP PPP S P GPPI + +L+D
Sbjct: 197 PPPMPGPRLGPGKPGLKFNGPPPPPPPPPPHLLSCWLPPFPSGPPIIPPPPPICPDSLDD 256
Query: 146 SDA 148
+DA
Sbjct: 257 ADA 259
>gi|13259527 survival of motor neuron 2, centromeric isoform a [Homo
sapiens]
Length = 282
Score = 36.6 bits (83), Expect = 0.013
Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 5/63 (7%)
Query: 91 PLPAESPKKGPKKVASGVLSPPPAAPPP-----SSSSVPEAGGPPIKKQKADVTLSALND 145
P P P+ GP K PPP PPP S P GPPI + +L+D
Sbjct: 197 PPPMPGPRLGPGKPGLKFNGPPPPPPPPPPHLLSCWLPPFPSGPPIIPPPPPICPDSLDD 256
Query: 146 SDA 148
+DA
Sbjct: 257 ADA 259
>gi|4507091 survival of motor neuron 1, telomeric isoform d [Homo
sapiens]
Length = 294
Score = 36.6 bits (83), Expect = 0.013
Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 5/63 (7%)
Query: 91 PLPAESPKKGPKKVASGVLSPPPAAPPP-----SSSSVPEAGGPPIKKQKADVTLSALND 145
P P P+ GP K PPP PPP S P GPPI + +L+D
Sbjct: 197 PPPMPGPRLGPGKPGLKFNGPPPPPPPPPPHLLSCWLPPFPSGPPIIPPPPPICPDSLDD 256
Query: 146 SDA 148
+DA
Sbjct: 257 ADA 259
>gi|119943102 CREB binding protein isoform b [Homo sapiens]
Length = 2404
Score = 35.4 bits (80), Expect = 0.030
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 78 ATVKRKVYEDSGIPLPAESPKKGPKKVASGVLSP-PPAAPPPSSSSVPEAGGPPIKKQKA 136
AT+ + +P P +P P + S +P PPA P PS S+ AG P + + +
Sbjct: 1832 ATMNTRNVPQQSLPSPTSAPPGTPTQQPSTPQTPQPPAQPQPSPVSMSPAGFPSVARTQP 1891
Query: 137 DVTLS 141
T+S
Sbjct: 1892 PTTVS 1896
>gi|119943104 CREB binding protein isoform a [Homo sapiens]
Length = 2442
Score = 35.4 bits (80), Expect = 0.030
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 78 ATVKRKVYEDSGIPLPAESPKKGPKKVASGVLSP-PPAAPPPSSSSVPEAGGPPIKKQKA 136
AT+ + +P P +P P + S +P PPA P PS S+ AG P + + +
Sbjct: 1870 ATMNTRNVPQQSLPSPTSAPPGTPTQQPSTPQTPQPPAQPQPSPVSMSPAGFPSVARTQP 1929
Query: 137 DVTLS 141
T+S
Sbjct: 1930 PTTVS 1934
>gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo
sapiens]
Length = 699
Score = 35.0 bits (79), Expect = 0.039
Identities = 40/149 (26%), Positives = 66/149 (44%), Gaps = 24/149 (16%)
Query: 33 ADSSPAGAKWTETEIEMLRAAVKRFGDDLNHISCVIKERTVAQ--IKA--TVKRKVYEDS 88
+ SS + + ++E E A K+ V K++ VA+ +KA T RK
Sbjct: 218 SSSSSSSSSSDDSEEEKAAATPKK---------TVPKKQVVAKAPVKAATTPTRKSSSSE 268
Query: 89 GIPLPAESPKKGPKKVASGVLS--PPPAAPPPSSSSVPEAGGPPIKKQK-ADVTLSALND 145
E +K P K G S PPP+APPP S + ++KQ+ + + + ++
Sbjct: 269 DSSSDEEEEQKKPMKNKPGPYSSVPPPSAPPPKKSLGTQPPKKAVEKQQPVESSEDSSDE 328
Query: 146 SDANSD--------VVDIEGLGETPPAKK 166
SD++S+ V + + PPAKK
Sbjct: 329 SDSSSEEEKKPPTKAVVSKATTKPPPAKK 357
Score = 27.7 bits (60), Expect = 6.3
Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Query: 86 EDSGIPLPAESPKKGPKKVASGVLSPPPAAPPPSSSSVPEAGGPPIKKQKADVTLSALND 145
+D PA + K K A V + PA P ++ P GG + +KAD + S
Sbjct: 373 DDEAPSKPAGTTKNSSNKPA--VTTKSPAVKPAAAPKQPVGGGQKLLTRKADSSSSEEES 430
Query: 146 SDANSD 151
S + +
Sbjct: 431 SSSEEE 436
Score = 27.7 bits (60), Expect = 6.3
Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 15/82 (18%)
Query: 98 KKGPKKVASGVLSPPPAAPPPSSSSVPEAGGPPIKKQKADVTLSALNDSDANSDVVDIEG 157
KK P+KVA G PA+ KK KA+ + S+ +D + + ++G
Sbjct: 491 KKKPQKVAGGAAPSKPAS---------------AKKGKAESSNSSSSDDSSEEEEEKLKG 535
Query: 158 LGETPPAKKLNFDQDSLTLDSG 179
G P +LT +G
Sbjct: 536 KGSPRPQAPKANGTSALTAQNG 557
>gi|191252782 p21-activated kinase 6 [Homo sapiens]
Length = 681
Score = 35.0 bits (79), Expect = 0.039
Identities = 40/157 (25%), Positives = 60/157 (38%), Gaps = 26/157 (16%)
Query: 13 SAAGAAFTKLGELTMQLHPVADSSPAGAKW-TETEIEMLRAAVKRFGDDLNHISCVIKER 71
S A F + +QL SSP GA T T ++AA K ++ SC++
Sbjct: 179 SLGPAEFQGASQRCLQLGACLQSSPPGASPPTGTNRHGMKAA-KHGSEEARPQSCLVGSA 237
Query: 72 T----------VAQIKATVKRKVYEDSGIPLPAESPKKGPKKVASGVLSPPPAAPPPSSS 121
T ++++KR+++ + A +P K PPP + P SS
Sbjct: 238 TGRPGGEGSPSPKTRESSLKRRLFRSMFLSTAATAPPSSSKP------GPPPQSKPNSSF 291
Query: 122 SVPEAGGPPIKKQKADV--------TLSALNDSDANS 150
P+ PP KA T S L SD +S
Sbjct: 292 RPPQKDNPPSLVAKAQSLPSDQPVGTFSPLTTSDTSS 328
>gi|191252780 p21-activated kinase 6 [Homo sapiens]
Length = 681
Score = 35.0 bits (79), Expect = 0.039
Identities = 40/157 (25%), Positives = 60/157 (38%), Gaps = 26/157 (16%)
Query: 13 SAAGAAFTKLGELTMQLHPVADSSPAGAKW-TETEIEMLRAAVKRFGDDLNHISCVIKER 71
S A F + +QL SSP GA T T ++AA K ++ SC++
Sbjct: 179 SLGPAEFQGASQRCLQLGACLQSSPPGASPPTGTNRHGMKAA-KHGSEEARPQSCLVGSA 237
Query: 72 T----------VAQIKATVKRKVYEDSGIPLPAESPKKGPKKVASGVLSPPPAAPPPSSS 121
T ++++KR+++ + A +P K PPP + P SS
Sbjct: 238 TGRPGGEGSPSPKTRESSLKRRLFRSMFLSTAATAPPSSSKP------GPPPQSKPNSSF 291
Query: 122 SVPEAGGPPIKKQKADV--------TLSALNDSDANS 150
P+ PP KA T S L SD +S
Sbjct: 292 RPPQKDNPPSLVAKAQSLPSDQPVGTFSPLTTSDTSS 328
>gi|9910476 p21-activated kinase 6 [Homo sapiens]
Length = 681
Score = 35.0 bits (79), Expect = 0.039
Identities = 40/157 (25%), Positives = 60/157 (38%), Gaps = 26/157 (16%)
Query: 13 SAAGAAFTKLGELTMQLHPVADSSPAGAKW-TETEIEMLRAAVKRFGDDLNHISCVIKER 71
S A F + +QL SSP GA T T ++AA K ++ SC++
Sbjct: 179 SLGPAEFQGASQRCLQLGACLQSSPPGASPPTGTNRHGMKAA-KHGSEEARPQSCLVGSA 237
Query: 72 T----------VAQIKATVKRKVYEDSGIPLPAESPKKGPKKVASGVLSPPPAAPPPSSS 121
T ++++KR+++ + A +P K PPP + P SS
Sbjct: 238 TGRPGGEGSPSPKTRESSLKRRLFRSMFLSTAATAPPSSSKP------GPPPQSKPNSSF 291
Query: 122 SVPEAGGPPIKKQKADV--------TLSALNDSDANS 150
P+ PP KA T S L SD +S
Sbjct: 292 RPPQKDNPPSLVAKAQSLPSDQPVGTFSPLTTSDTSS 328
>gi|15812226 transcriptional regulating factor 1 [Homo sapiens]
Length = 1200
Score = 35.0 bits (79), Expect = 0.039
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 7/81 (8%)
Query: 2 TSASTKVGEIFSAAGAAFTKLGELTMQ------LHPVADSSPAGA-KWTETEIEMLRAAV 54
T++ + +F A G L L ++ HP+A+ AG+ KWT E ++ A+
Sbjct: 843 TNSEFALHSLFEAKGDVMVALEMLLLRKPVRLKCHPLANYHYAGSDKWTSLERKLFNKAL 902
Query: 55 KRFGDDLNHISCVIKERTVAQ 75
+ D + ++K +TVAQ
Sbjct: 903 ATYSKDFIFVQKMVKSKTVAQ 923
>gi|139394579 zinc finger and BTB domain containing 40 [Homo
sapiens]
Length = 1239
Score = 35.0 bits (79), Expect = 0.039
Identities = 31/129 (24%), Positives = 52/129 (40%), Gaps = 8/129 (6%)
Query: 64 ISCVIKERTVAQIKATVKRKVYEDSGIPLPAESPKKGPKKVASGVLSPPPAAPPPSSSSV 123
+SC K + + +V+ +V D P +E+ +K P+K +LS A P SS +
Sbjct: 107 VSC--KNLLTSLVNCSVQGQVVRDVSAP-SSETFRKEPEKPQVEILSSEGAGEPHSSPEL 163
Query: 124 PEAGGPPIKKQKADVTLSALNDSDANSDVV-----DIEGLGETPPAKKLNFDQDSLTLDS 178
G P+K + + S + NS + E ETP + ++ S
Sbjct: 164 AATPGGPVKAETEEAAHSVSQEMSVNSPTAQESQRNAETPAETPTTAEACSPSPAVQTFS 223
Query: 179 GLLMTSADP 187
TS +P
Sbjct: 224 EAKKTSTEP 232
>gi|139394556 zinc finger and BTB domain containing 40 [Homo
sapiens]
Length = 1239
Score = 35.0 bits (79), Expect = 0.039
Identities = 31/129 (24%), Positives = 52/129 (40%), Gaps = 8/129 (6%)
Query: 64 ISCVIKERTVAQIKATVKRKVYEDSGIPLPAESPKKGPKKVASGVLSPPPAAPPPSSSSV 123
+SC K + + +V+ +V D P +E+ +K P+K +LS A P SS +
Sbjct: 107 VSC--KNLLTSLVNCSVQGQVVRDVSAP-SSETFRKEPEKPQVEILSSEGAGEPHSSPEL 163
Query: 124 PEAGGPPIKKQKADVTLSALNDSDANSDVV-----DIEGLGETPPAKKLNFDQDSLTLDS 178
G P+K + + S + NS + E ETP + ++ S
Sbjct: 164 AATPGGPVKAETEEAAHSVSQEMSVNSPTAQESQRNAETPAETPTTAEACSPSPAVQTFS 223
Query: 179 GLLMTSADP 187
TS +P
Sbjct: 224 EAKKTSTEP 232
>gi|28875784 armadillo repeat containing 5 isoform b [Homo sapiens]
Length = 725
Score = 35.0 bits (79), Expect = 0.039
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 97 PKKGPKKVASGVLSPPPAAPPPSSSSVPEAGGPPIKKQKA-DVTLSALND 145
P P ASG SP PA+ P S+ + PP++ +K D+ LS L D
Sbjct: 89 PGSAPSSAASGASSPAPASGPAPSAVSSSSPTPPVRLRKTLDLALSILAD 138
>gi|157426856 armadillo repeat containing 5 isoform a [Homo sapiens]
Length = 935
Score = 35.0 bits (79), Expect = 0.039
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 97 PKKGPKKVASGVLSPPPAAPPPSSSSVPEAGGPPIKKQKA-DVTLSALND 145
P P ASG SP PA+ P S+ + PP++ +K D+ LS L D
Sbjct: 89 PGSAPSSAASGASSPAPASGPAPSAVSSSSPTPPVRLRKTLDLALSILAD 138
>gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 34.7 bits (78), Expect = 0.051
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 88 SGIPLPAESPKKGPKKVASGVL--SPPPAAPPPSSSSVPEAGGPPI 131
+ + PA P P ++A GVL +PPP APP S P A P+
Sbjct: 361 TALQAPAVPPPPAPLQIAPGVLHPAPPPIAPPLVQPSPPVARAAPV 406
>gi|68161502 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 34.7 bits (78), Expect = 0.051
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 88 SGIPLPAESPKKGPKKVASGVL--SPPPAAPPPSSSSVPEAGGPPI 131
+ + PA P P ++A GVL +PPP APP S P A P+
Sbjct: 361 TALQAPAVPPPPAPLQIAPGVLHPAPPPIAPPLVQPSPPVARAAPV 406
>gi|68161500 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 34.7 bits (78), Expect = 0.051
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 88 SGIPLPAESPKKGPKKVASGVL--SPPPAAPPPSSSSVPEAGGPPI 131
+ + PA P P ++A GVL +PPP APP S P A P+
Sbjct: 361 TALQAPAVPPPPAPLQIAPGVLHPAPPPIAPPLVQPSPPVARAAPV 406
>gi|4507913 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 34.7 bits (78), Expect = 0.051
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 88 SGIPLPAESPKKGPKKVASGVL--SPPPAAPPPSSSSVPEAGGPPI 131
+ + PA P P ++A GVL +PPP APP S P A P+
Sbjct: 361 TALQAPAVPPPPAPLQIAPGVLHPAPPPIAPPLVQPSPPVARAAPV 406
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 34.7 bits (78), Expect = 0.051
Identities = 31/91 (34%), Positives = 31/91 (34%), Gaps = 17/91 (18%)
Query: 89 GIPLPA----ESPKKGPKKVASGVLSPPPAAPPPSSSSVPEAGGPPIK-----------K 133
G P PA SPK GP PPAA PPS P G PP K
Sbjct: 1285 GAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSP--GTPPPKGAPTPPAVTPPS 1342
Query: 134 QKADVTLSALNDSDANSDVVDIEGLGETPPA 164
K TL A S G TPPA
Sbjct: 1343 PKGTPTLPATTPSSKGGPTTPSSKEGPTPPA 1373
Score = 31.2 bits (69), Expect = 0.57
Identities = 18/44 (40%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Query: 92 LPAESPKKGPKKVASGVLSPP--PAAPPPSSSSVPEAGGPPIKK 133
L SPK P A+ SP PA PPP + P A PP K
Sbjct: 1232 LATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLK 1275
Score = 29.6 bits (65), Expect = 1.6
Identities = 22/71 (30%), Positives = 26/71 (36%), Gaps = 9/71 (12%)
Query: 96 SPKKGPKKVASGVLSPPPAAPPPSSSSVPEAGGPPIKKQKADVTLSALNDSDANSDVVDI 155
SPK+ P PPA PPS P P VT S+L DS + V
Sbjct: 1609 SPKEAPT---------PPAVTPPSPEKGPATPAPKGTPTSPPVTPSSLKDSPTSPASVTC 1659
Query: 156 EGLGETPPAKK 166
+ P A K
Sbjct: 1660 KMGATVPQASK 1670
Score = 28.5 bits (62), Expect = 3.7
Identities = 17/45 (37%), Positives = 18/45 (40%), Gaps = 4/45 (8%)
Query: 89 GIPLPAE----SPKKGPKKVASGVLSPPPAAPPPSSSSVPEAGGP 129
G P P SPK GP + PPAA PPS P P
Sbjct: 938 GAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSP 982
Score = 28.1 bits (61), Expect = 4.8
Identities = 19/47 (40%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
Query: 89 GIPLPAESPKKGPKKVASGVLSPP--PAAPPPSSSSVPEAGGPPIKK 133
GIP + SPK P A+ SP PA P P + P A PP K
Sbjct: 929 GIPA-SPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPK 974
Score = 28.1 bits (61), Expect = 4.8
Identities = 14/34 (41%), Positives = 15/34 (44%)
Query: 96 SPKKGPKKVASGVLSPPPAAPPPSSSSVPEAGGP 129
SPK GP + PPAA PPS P P
Sbjct: 972 SPKGGPATPSPKGAPTPPAATPPSPKGGPATPSP 1005
Score = 28.1 bits (61), Expect = 4.8
Identities = 28/89 (31%), Positives = 34/89 (38%), Gaps = 14/89 (15%)
Query: 90 IPLPAESPKKGPKKVASGVLSPPPAAPP-----PSSSSVPEAGGPPIKKQKADVTLSA-- 142
+P S K GP +S PPAA P P+ + GP I K D T A
Sbjct: 1349 LPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVI 1408
Query: 143 -LNDSDANSDVVDIEGLGE------TPPA 164
L+ A + V EG TPPA
Sbjct: 1409 PLSPKKAPATPVTREGAATPSKGDLTPPA 1437
Score = 27.7 bits (60), Expect = 6.3
Identities = 23/74 (31%), Positives = 28/74 (37%), Gaps = 6/74 (8%)
Query: 91 PLPAESPKKGPKKVASGVLSPPPAAPPPSSSSVPEAGGPPIKKQKADVTLSALNDSDANS 150
P P SP P + S PPAA PPS P A P+ K + L
Sbjct: 1017 PSPKGSPAATPFPKGA---STPPAATPPSPKGSPAA--TPLPKGAPTTPAATLPSPKGGP 1071
Query: 151 DVVDIEGLGETPPA 164
++G TPPA
Sbjct: 1072 ATPSLKG-APTPPA 1084
Score = 27.7 bits (60), Expect = 6.3
Identities = 14/34 (41%), Positives = 15/34 (44%)
Query: 96 SPKKGPKKVASGVLSPPPAAPPPSSSSVPEAGGP 129
SPK GP + PPAA PPS P P
Sbjct: 1066 SPKGGPATPSLKGAPTPPAATPPSPKGGPATPSP 1099
Score = 27.3 bits (59), Expect = 8.2
Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Query: 96 SPKKGPKKVASGVLSPP--PAAPPPSSSSVPEAGGPPIKK 133
SPK P A+ SP PA P P + P A PP K
Sbjct: 958 SPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPK 997
>gi|7661892 REST corepressor 1 [Homo sapiens]
Length = 482
Score = 34.3 bits (77), Expect = 0.067
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 6/89 (6%)
Query: 40 AKWTETEIEMLRAAVKRFGDDLNHISCVIKERTVAQIK---ATVKRKVYEDSGIPLPAES 96
A+WT E + A++++G D IS VI ++V Q+K +R+ D + E
Sbjct: 381 ARWTTEEQLLAVQAIRKYGRDFQAISDVIGNKSVVQVKNFFVNYRRRFNIDEVL---QEW 437
Query: 97 PKKGPKKVASGVLSPPPAAPPPSSSSVPE 125
+ K+ +G + P P +S +PE
Sbjct: 438 EAEHGKEETNGPSNQKPVKSPDNSIKMPE 466
>gi|166235136 seizure related 6 homolog (mouse)-like 2 isoform 2
[Homo sapiens]
Length = 910
Score = 34.3 bits (77), Expect = 0.067
Identities = 35/143 (24%), Positives = 63/143 (44%), Gaps = 26/143 (18%)
Query: 43 TETEIEMLRAAVKRFGDDLNHISCVIKERTVAQIKA-------TVKRKVYEDSGIPLPAE 95
+E E+L A+ R G ++ ++ ++ T+A A ++ R +G A
Sbjct: 48 SEALAELLHGALLRRGPEMGYLPGSDRDPTLATPPAGQTLAVPSLPRATEPGTGPLTTAV 107
Query: 96 SPK--KGPKKVASGVLSPPP--AAPPPSSSSVPEAGGPPIKKQKAD------------VT 139
+P +G A +L+PPP APPP S P + GPP+ + + VT
Sbjct: 108 TPNGVRGAGPTAPELLTPPPGTTAPPPPS---PASPGPPLGPEGGEEETTTTIITTTTVT 164
Query: 140 LSALNDSDANSDVVDIEGLGETP 162
+ + N+++ + EG E+P
Sbjct: 165 TTVTSPVLCNNNISEGEGYVESP 187
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.309 0.127 0.358
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,604,724
Number of Sequences: 37866
Number of extensions: 473998
Number of successful extensions: 7206
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 193
Number of HSP's successfully gapped in prelim test: 351
Number of HSP's that attempted gapping in prelim test: 5340
Number of HSP's gapped (non-prelim): 1919
length of query: 192
length of database: 18,247,518
effective HSP length: 97
effective length of query: 95
effective length of database: 14,574,516
effective search space: 1384579020
effective search space used: 1384579020
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.