Guide to the Human Genome
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Name: XRCC2 Sequence: fasta or formatted (280aa) NCBI GI: 4885657
Description:

X-ray repair cross complementing protein 2

Referenced in:

DNases, Recombination, and DNA Repair

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.6         10           1
 C cysteine            4.3         12           1
 D aspartate           5.0         14           2
 E glutamate           8.2         23           2
 F phenylalanine       5.7         16           2
 G glycine             4.6         13           2
 H histidine           3.9         11           1
 I isoleucine          4.6         13           2
 K lysine              4.6         13           2
 L leucine            13.9         39           3
 M methionine          2.1          6           1
 N asparagine          2.1          6           1
 P proline             2.5          7           1
 Q glutamine           3.6         10           2
 R arginine            5.4         15           2
 S serine             12.9         36           4
 T threonine           4.3         12           2
 V valine              4.6         13           1
 W tryptophan          0.7          2           1
 Y tyrosine            3.2          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   X-ray repair cross complementing protein 2 
RAD51                 0.064   RAD51 homolog protein isoform 1 
RAD51L1               0.053   RAD51-like 1 isoform 3 
RAD51L1               0.053   RAD51-like 1 isoform 2 
RAD51L1               0.053   RAD51-like 1 isoform 1 
RAD51C                0.050   RAD51 homolog C isoform 1 
DMC1                  0.041   DMC1 dosage suppressor of mck1 homolog 
XRCC3                 0.018   X-ray repair cross complementing protein 3 
XRCC3                 0.018   X-ray repair cross complementing protein 3 
XRCC3                 0.018   X-ray repair cross complementing protein 3 
RAD51L3               0.015   RAD51-like 3 isoform 6 
RAD51L3               0.015   RAD51-like 3 isoform 1 
WDFY4                 0.015   WDFY family member 4 
KATNAL2               0.011   katanin p60 subunit A-like 2 
C5orf36               0.006   hypothetical protein LOC285600 isoform 1 
RAD51                 0.006   RAD51 homolog protein isoform 2 
C5orf36               0.006   hypothetical protein LOC285600 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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