Guide to the Human Genome
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Name: XRCC3 Sequence: fasta or formatted (346aa) NCBI GI: 4885659
Description:

X-ray repair cross complementing protein 3

Referenced in:

DNases, Recombination, and DNA Repair

Other entries for this name:
alt mRNA [346aa] X-ray repair cross complementing protein 3
alt mRNA [346aa] X-ray repair cross complementing protein 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.8         34           2
 C cysteine            2.3          8           1
 D aspartate           4.0         14           1
 E glutamate           5.5         19           3
 F phenylalanine       2.9         10           1
 G glycine             6.6         23           2
 H histidine           3.5         12           1
 I isoleucine          3.5         12           2
 K lysine              3.5         12           2
 L leucine            16.2         56           2
 M methionine          1.2          4           1
 N asparagine          1.4          5           1
 P proline             6.1         21           2
 Q glutamine           6.4         22           2
 R arginine            7.5         26           1
 S serine              7.5         26           2
 T threonine           4.6         16           1
 V valine              6.1         21           2
 W tryptophan          0.9          3           1
 Y tyrosine            0.6          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   X-ray repair cross complementing protein 3 
XRCC3                 1.000   X-ray repair cross complementing protein 3 
XRCC3                 1.000   X-ray repair cross complementing protein 3 
RAD51L1               0.115   RAD51-like 1 isoform 3 
RAD51L1               0.115   RAD51-like 1 isoform 2 
RAD51L1               0.115   RAD51-like 1 isoform 1 
RAD51C                0.102   RAD51 homolog C isoform 1 
RAD51                 0.085   RAD51 homolog protein isoform 1 
DMC1                  0.082   DMC1 dosage suppressor of mck1 homolog 
RAD51L3               0.053   RAD51-like 3 isoform 1 
RAD51L3               0.047   RAD51-like 3 isoform 6 
RAD51C                0.026   RAD51 homolog C isoform 2 
XRCC2                 0.015   X-ray repair cross complementing protein 2 
TNIK                  0.012   TRAF2 and NCK interacting kinase isoform 4 
TNIK                  0.012   TRAF2 and NCK interacting kinase isoform 3 
TNIK                  0.012   TRAF2 and NCK interacting kinase isoform 2 
TNIK                  0.012   TRAF2 and NCK interacting kinase isoform 1 
MAGED2                0.011   melanoma antigen family D, 2 
MAGED2                0.011   melanoma antigen family D, 2 
MAGED2                0.011   melanoma antigen family D, 2 
RAD51L3               0.008   RAD51-like 3 isoform 4 
NLRC5                 0.008   nucleotide-binding oligomerization domains 27 [Homo...
SLC23A3               0.008   solute carrier family 23 (nucleobase transporters),...
SLC23A3               0.008   solute carrier family 23 (nucleobase transporters),...
WDR53                 0.008   WD repeat domain 53 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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