Guide to the Human Genome
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Name: RAD51L3 Sequence: fasta or formatted (216aa) NCBI GI: 19924125
Description:

RAD51-like 3 isoform 4

Referenced in:

DNases, Recombination, and DNA Repair

Other entries for this name:
alt prot [348aa] RAD51-like 3 isoform 6
alt prot [328aa] RAD51-like 3 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.9         17           1
 C cysteine            1.4          3           1
 D aspartate           5.1         11           1
 E glutamate           5.1         11           2
 F phenylalanine       1.9          4           1
 G glycine             9.7         21           2
 H histidine           1.4          3           1
 I isoleucine          3.7          8           1
 K lysine              3.2          7           1
 L leucine            12.0         26           2
 M methionine          3.7          8           2
 N asparagine          0.5          1           1
 P proline             2.3          5           1
 Q glutamine           6.9         15           2
 R arginine            7.9         17           2
 S serine              7.4         16           2
 T threonine           7.4         16           1
 V valine             11.1         24           4
 W tryptophan          0.9          2           1
 Y tyrosine            0.5          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   RAD51-like 3 isoform 4 
RAD51L3               0.765   RAD51-like 3 isoform 6 
RAD51L3               0.765   RAD51-like 3 isoform 1 
RAD51L1               0.043   RAD51-like 1 isoform 2 
RAD51L1               0.041   RAD51-like 1 isoform 3 
RAD51L1               0.041   RAD51-like 1 isoform 1 
RAD51C                0.038   RAD51 homolog C isoform 1 
RAD51                 0.031   RAD51 homolog protein isoform 1 
RAD51                 0.031   RAD51 homolog protein isoform 2 
XRCC3                 0.013   X-ray repair cross complementing protein 3 
XRCC3                 0.013   X-ray repair cross complementing protein 3 
XRCC3                 0.013   X-ray repair cross complementing protein 3 
ATRX                  0.010   transcriptional regulator ATRX isoform 2 
ATRX                  0.010   transcriptional regulator ATRX isoform 1 
C12orf51              0.010   chromosome 12 open reading frame 51 
AUH                   0.008   AU RNA binding protein/enoyl-Coenzyme A hydratase pre...
TIAM2                 0.008   T-cell lymphoma invasion and metastasis 2 isoform b ...
TIAM2                 0.008   T-cell lymphoma invasion and metastasis 2 isoform a ...
VAT1L                 0.008   vesicle amine transport protein 1 homolog (T. califo...
LOC100132308          0.008   PREDICTED: similar to solute carrier family 29 (nuc...
LOC402509             0.008   PREDICTED: similar to solute carrier family 29 (nuc...
LOC100132308          0.008   PREDICTED: similar to solute carrier family 29 (nuc...
LOC402509             0.008   PREDICTED: similar to solute carrier family 29 (nuc...
SLC29A4               0.008   solute carrier family 29 (nucleoside transporters),...
SLC29A4               0.008   solute carrier family 29 (nucleoside transporters),...
FMO4                  0.008   flavin containing monooxygenase 4 
CPNE8                 0.008   copine VIII 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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