Guide to the Human Genome
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Name: RAD51 Sequence: fasta or formatted (242aa) NCBI GI: 154275771
Description:

RAD51 homolog protein isoform 2

Referenced in:

DNases, Recombination, and DNA Repair

Other entries for this name:
alt prot [339aa] RAD51 homolog protein isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            14.5         35           2
 C cysteine            1.2          3           1
 D aspartate           6.2         15           1
 E glutamate           7.0         17           3
 F phenylalanine       2.9          7           1
 G glycine             6.6         16           2
 H histidine           1.7          4           1
 I isoleucine          5.8         14           2
 K lysine              5.0         12           2
 L leucine             8.7         21           2
 M methionine          4.1         10           2
 N asparagine          3.7          9           1
 P proline             2.9          7           1
 Q glutamine           4.1         10           1
 R arginine            5.8         14           1
 S serine              5.4         13           1
 T threonine           4.1         10           2
 V valine              6.6         16           2
 W tryptophan          0.0          0           0
 Y tyrosine            3.7          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   RAD51 homolog protein isoform 2 
RAD51                 0.680   RAD51 homolog protein isoform 1 
DMC1                  0.356   DMC1 dosage suppressor of mck1 homolog 
RAD51L1               0.074   RAD51-like 1 isoform 3 
RAD51L1               0.074   RAD51-like 1 isoform 2 
RAD51L1               0.074   RAD51-like 1 isoform 1 
RAD51C                0.056   RAD51 homolog C isoform 1 
RAD51L3               0.027   RAD51-like 3 isoform 4 
RAD51L3               0.020   RAD51-like 3 isoform 6 
RAD51L3               0.020   RAD51-like 3 isoform 1 
XRCC2                 0.007   X-ray repair cross complementing protein 2 
IGHMBP2               0.007   immunoglobulin mu binding protein 2 
TRIM32                0.007   tripartite motif-containing 32 
TRIM32                0.007   tripartite motif-containing 32 
MYH10                 0.007   myosin, heavy polypeptide 10, non-muscle 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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