Guide to the Human Genome
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Search of human proteins with 217330658

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|217330658 hypothetical protein LOC9812 [Homo sapiens]
         (515 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|217330658 hypothetical protein LOC9812 [Homo sapiens]             1052   0.0  
gi|217330656 hypothetical protein LOC9812 [Homo sapiens]             1052   0.0  
gi|19923669 sel-1 suppressor of lin-12-like [Homo sapiens]             64   4e-10
gi|151301150 sel-1 suppressor of lin-12-like 2 [Homo sapiens]          58   2e-08
gi|33620759 LRP2 binding protein [Homo sapiens]                        54   3e-07
gi|153251865 hypothetical protein LOC84226 [Homo sapiens]              42   0.001
gi|199562283 retrotransposon-like 1 [Homo sapiens]                     39   0.015
gi|29570782 additional sex combs like 1 [Homo sapiens]                 37   0.043
gi|154689719 hypothetical protein LOC23231 [Homo sapiens]              37   0.043
gi|169166055 PREDICTED: hypothetical protein [Homo sapiens]            37   0.056
gi|239742084 PREDICTED: hypothetical protein XP_002342433 [Homo ...    37   0.056
gi|14150078 hypothetical protein LOC84273 [Homo sapiens]               36   0.096
gi|29789008 Huntingtin interacting protein C isoform 2 [Homo sap...    35   0.13 
gi|72534686 Huntingtin interacting protein C isoform 1 [Homo sap...    35   0.13 
gi|57232759 intestine-specific homeobox [Homo sapiens]                 34   0.37 
gi|51479177 iroquois homeobox protein 1 [Homo sapiens]                 33   0.62 
gi|4506509 regulator of G-protein signalling 12 isoform 2 [Homo ...    33   0.81 
gi|38327601 regulator of G-protein signalling 12 isoform 1 [Homo...    33   0.81 
gi|38327599 regulator of G-protein signalling 12 isoform 3 [Homo...    33   0.81 
gi|150170670 piccolo isoform 2 [Homo sapiens]                          32   1.4  
gi|150378539 piccolo isoform 1 [Homo sapiens]                          32   1.4  
gi|38348206 Ras and Rab interactor-like [Homo sapiens]                 32   1.4  
gi|208431781 cyclic nucleotide gated channel beta 1 isoform b [H...    32   1.8  
gi|114205399 cyclic nucleotide gated channel beta 1 isoform a [H...    32   1.8  
gi|71274152 hypothetical protein LOC388939 [Homo sapiens]              32   1.8  
gi|71274109 nuclear factor of kappa light polypeptide gene enhan...    31   2.4  
gi|14790128 caspase 9 isoform beta preproprotein [Homo sapiens]        31   2.4  
gi|169173182 PREDICTED: hypothetical protein [Homo sapiens]            31   2.4  
gi|155029550 chromosome 9 open reading frame 79 [Homo sapiens]         31   2.4  
gi|21071016 epidermal growth factor receptor pathway substrate 8...    31   2.4  

>gi|217330658 hypothetical protein LOC9812 [Homo sapiens]
          Length = 515

 Score = 1052 bits (2720), Expect = 0.0
 Identities = 515/515 (100%), Positives = 515/515 (100%)

Query: 1   MWRLPGLLGRALPRTLGPSLWRVTPKSTSPDGPQTTSSTLLVPVPNLDRSGPHGPGTSGG 60
           MWRLPGLLGRALPRTLGPSLWRVTPKSTSPDGPQTTSSTLLVPVPNLDRSGPHGPGTSGG
Sbjct: 1   MWRLPGLLGRALPRTLGPSLWRVTPKSTSPDGPQTTSSTLLVPVPNLDRSGPHGPGTSGG 60

Query: 61  PRSHGWKDAFQWMSSRVSPNTLWDAISWGTLAVLALQLARQIHFQASLPAGPQRVEHCSW 120
           PRSHGWKDAFQWMSSRVSPNTLWDAISWGTLAVLALQLARQIHFQASLPAGPQRVEHCSW
Sbjct: 61  PRSHGWKDAFQWMSSRVSPNTLWDAISWGTLAVLALQLARQIHFQASLPAGPQRVEHCSW 120

Query: 121 HSPLDRFFSSPLWHPCSSLRQHILPSPDGPAPRHTGLREPRLGQEEASAQPRNFSHNSLR 180
           HSPLDRFFSSPLWHPCSSLRQHILPSPDGPAPRHTGLREPRLGQEEASAQPRNFSHNSLR
Sbjct: 121 HSPLDRFFSSPLWHPCSSLRQHILPSPDGPAPRHTGLREPRLGQEEASAQPRNFSHNSLR 180

Query: 181 GARPQDPSEEGPGDFGFLHASSSIESEAKPAQPQPTGEKEQDKSKTLSLEEAVTSIQQLF 240
           GARPQDPSEEGPGDFGFLHASSSIESEAKPAQPQPTGEKEQDKSKTLSLEEAVTSIQQLF
Sbjct: 181 GARPQDPSEEGPGDFGFLHASSSIESEAKPAQPQPTGEKEQDKSKTLSLEEAVTSIQQLF 240

Query: 241 QLSVSIAFNFLGTENMKSGDHTAAFSYFQKAAARGYSKAQYNAGLCHEHGRGTPRDISKA 300
           QLSVSIAFNFLGTENMKSGDHTAAFSYFQKAAARGYSKAQYNAGLCHEHGRGTPRDISKA
Sbjct: 241 QLSVSIAFNFLGTENMKSGDHTAAFSYFQKAAARGYSKAQYNAGLCHEHGRGTPRDISKA 300

Query: 301 VLYYQLAASQGHSLAQYRYARCLLRDPASSWNPERQRAVSLLKQAADSGLREAQAFLGVL 360
           VLYYQLAASQGHSLAQYRYARCLLRDPASSWNPERQRAVSLLKQAADSGLREAQAFLGVL
Sbjct: 301 VLYYQLAASQGHSLAQYRYARCLLRDPASSWNPERQRAVSLLKQAADSGLREAQAFLGVL 360

Query: 361 FTKEPYLDEQRAVKYLWLAANNGDSQSRYHLGICYEKGLGVQRNLGEALRCYQQSAALGN 420
           FTKEPYLDEQRAVKYLWLAANNGDSQSRYHLGICYEKGLGVQRNLGEALRCYQQSAALGN
Sbjct: 361 FTKEPYLDEQRAVKYLWLAANNGDSQSRYHLGICYEKGLGVQRNLGEALRCYQQSAALGN 420

Query: 421 EAAQERLRALFSMGAAAPGPSDLTVTGLKSFSSPSLCSLNTLLAGTSRLPHASSTGNLGL 480
           EAAQERLRALFSMGAAAPGPSDLTVTGLKSFSSPSLCSLNTLLAGTSRLPHASSTGNLGL
Sbjct: 421 EAAQERLRALFSMGAAAPGPSDLTVTGLKSFSSPSLCSLNTLLAGTSRLPHASSTGNLGL 480

Query: 481 LCRSGHLGASLEASSRAIPPHPYPLERSVVRLGFG 515
           LCRSGHLGASLEASSRAIPPHPYPLERSVVRLGFG
Sbjct: 481 LCRSGHLGASLEASSRAIPPHPYPLERSVVRLGFG 515


>gi|217330656 hypothetical protein LOC9812 [Homo sapiens]
          Length = 515

 Score = 1052 bits (2720), Expect = 0.0
 Identities = 515/515 (100%), Positives = 515/515 (100%)

Query: 1   MWRLPGLLGRALPRTLGPSLWRVTPKSTSPDGPQTTSSTLLVPVPNLDRSGPHGPGTSGG 60
           MWRLPGLLGRALPRTLGPSLWRVTPKSTSPDGPQTTSSTLLVPVPNLDRSGPHGPGTSGG
Sbjct: 1   MWRLPGLLGRALPRTLGPSLWRVTPKSTSPDGPQTTSSTLLVPVPNLDRSGPHGPGTSGG 60

Query: 61  PRSHGWKDAFQWMSSRVSPNTLWDAISWGTLAVLALQLARQIHFQASLPAGPQRVEHCSW 120
           PRSHGWKDAFQWMSSRVSPNTLWDAISWGTLAVLALQLARQIHFQASLPAGPQRVEHCSW
Sbjct: 61  PRSHGWKDAFQWMSSRVSPNTLWDAISWGTLAVLALQLARQIHFQASLPAGPQRVEHCSW 120

Query: 121 HSPLDRFFSSPLWHPCSSLRQHILPSPDGPAPRHTGLREPRLGQEEASAQPRNFSHNSLR 180
           HSPLDRFFSSPLWHPCSSLRQHILPSPDGPAPRHTGLREPRLGQEEASAQPRNFSHNSLR
Sbjct: 121 HSPLDRFFSSPLWHPCSSLRQHILPSPDGPAPRHTGLREPRLGQEEASAQPRNFSHNSLR 180

Query: 181 GARPQDPSEEGPGDFGFLHASSSIESEAKPAQPQPTGEKEQDKSKTLSLEEAVTSIQQLF 240
           GARPQDPSEEGPGDFGFLHASSSIESEAKPAQPQPTGEKEQDKSKTLSLEEAVTSIQQLF
Sbjct: 181 GARPQDPSEEGPGDFGFLHASSSIESEAKPAQPQPTGEKEQDKSKTLSLEEAVTSIQQLF 240

Query: 241 QLSVSIAFNFLGTENMKSGDHTAAFSYFQKAAARGYSKAQYNAGLCHEHGRGTPRDISKA 300
           QLSVSIAFNFLGTENMKSGDHTAAFSYFQKAAARGYSKAQYNAGLCHEHGRGTPRDISKA
Sbjct: 241 QLSVSIAFNFLGTENMKSGDHTAAFSYFQKAAARGYSKAQYNAGLCHEHGRGTPRDISKA 300

Query: 301 VLYYQLAASQGHSLAQYRYARCLLRDPASSWNPERQRAVSLLKQAADSGLREAQAFLGVL 360
           VLYYQLAASQGHSLAQYRYARCLLRDPASSWNPERQRAVSLLKQAADSGLREAQAFLGVL
Sbjct: 301 VLYYQLAASQGHSLAQYRYARCLLRDPASSWNPERQRAVSLLKQAADSGLREAQAFLGVL 360

Query: 361 FTKEPYLDEQRAVKYLWLAANNGDSQSRYHLGICYEKGLGVQRNLGEALRCYQQSAALGN 420
           FTKEPYLDEQRAVKYLWLAANNGDSQSRYHLGICYEKGLGVQRNLGEALRCYQQSAALGN
Sbjct: 361 FTKEPYLDEQRAVKYLWLAANNGDSQSRYHLGICYEKGLGVQRNLGEALRCYQQSAALGN 420

Query: 421 EAAQERLRALFSMGAAAPGPSDLTVTGLKSFSSPSLCSLNTLLAGTSRLPHASSTGNLGL 480
           EAAQERLRALFSMGAAAPGPSDLTVTGLKSFSSPSLCSLNTLLAGTSRLPHASSTGNLGL
Sbjct: 421 EAAQERLRALFSMGAAAPGPSDLTVTGLKSFSSPSLCSLNTLLAGTSRLPHASSTGNLGL 480

Query: 481 LCRSGHLGASLEASSRAIPPHPYPLERSVVRLGFG 515
           LCRSGHLGASLEASSRAIPPHPYPLERSVVRLGFG
Sbjct: 481 LCRSGHLGASLEASSRAIPPHPYPLERSVVRLGFG 515


>gi|19923669 sel-1 suppressor of lin-12-like [Homo sapiens]
          Length = 794

 Score = 63.5 bits (153), Expect = 4e-10
 Identities = 51/172 (29%), Positives = 85/172 (49%), Gaps = 6/172 (3%)

Query: 267 YFQKAAARGYSKAQYNAGLCHEHG-RGTPRDISKAVLYYQLAASQGHSLAQYRYARCLLR 325
           Y+Q  A +G  +AQ   G  H HG RG  ++  +A  Y+ LAA+ G+S A     +  + 
Sbjct: 363 YYQFLAEKGDVQAQVGLGQLHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGK--MY 420

Query: 326 DPASSWNPE-RQRAVSLLKQAADSGLREAQAFLGV--LFTKEPYLDEQRAVKYLWLAANN 382
              S   P+  + A+   K+AAD G    Q+ LG+  L+ +   ++   A+KY   AA  
Sbjct: 421 SEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQ 480

Query: 383 GDSQSRYHLGICYEKGLGVQRNLGEALRCYQQSAALGNEAAQERLRALFSMG 434
           G    +  LG  Y  G+GV+R+  +AL+ +  ++  G+  A   L  + + G
Sbjct: 481 GWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLASQGGHILAFYNLAQMHASG 532



 Score = 53.9 bits (128), Expect = 3e-07
 Identities = 59/229 (25%), Positives = 89/229 (38%), Gaps = 45/229 (19%)

Query: 245 SIAFNFLGTENMKSGDHTAAFSYFQKAAARGYSKAQYNAGLCHEHGRGTPR--------- 295
           S+ +N +G +     D+  A  YF  A+  G+  A YN    H  G G  R         
Sbjct: 491 SMYYNGIGVKR----DYKQALKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELF 546

Query: 296 -----------------------DISKAVLYYQLAASQGHSLAQYRYARCLLRDPAS--S 330
                                  D + AV+ Y L A QG+ +AQ   A  L +  AS   
Sbjct: 547 KNVCERGRWSERLMTAYNSYKDGDYNAAVIQYLLLAEQGYEVAQSNAAFILDQREASIVG 606

Query: 331 WNPERQRAVSLLKQAADSGLREAQAFLGVLF-----TKEPYLDEQRAVKYLWLAANNGDS 385
            N    RA+    +AA  G   A+  LG        T   Y  E   + Y   +     +
Sbjct: 607 ENETYPRALLHWNRAASQGYTVARIKLGDYHFYGFGTDVDY--ETAFIHYRLASEQQHSA 664

Query: 386 QSRYHLGICYEKGLGVQRNLGEALRCYQQSAALGNEAAQERLRALFSMG 434
           Q+ ++LG  +EKGLG+++++  A R Y  +A    +A      AL  +G
Sbjct: 665 QAMFNLGYMHEKGLGIKQDIHLAKRFYDMAAEASPDAQVPVFLALCKLG 713



 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 40/137 (29%), Positives = 64/137 (46%), Gaps = 4/137 (2%)

Query: 301 VLYYQLAASQGHSLAQYRYARCLLRDPASSWNPERQRAVSLLKQAADSGLREAQAFLGVL 360
           + YYQ  A +G   AQ    +  L           QRA      AA++G   A AFLG +
Sbjct: 361 IQYYQFLAEKGDVQAQVGLGQLHLHG-GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKM 419

Query: 361 FTKEPYL---DEQRAVKYLWLAANNGDSQSRYHLGICYEKGLGVQRNLGEALRCYQQSAA 417
           +++   +     + A+ Y   AA+ G+   +  LG+ Y  G GVQ N   AL+ +Q++A 
Sbjct: 420 YSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAE 479

Query: 418 LGNEAAQERLRALFSMG 434
            G    Q +L +++  G
Sbjct: 480 QGWVDGQLQLGSMYYNG 496



 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 46/176 (26%), Positives = 77/176 (43%), Gaps = 7/176 (3%)

Query: 260 DHTAAFSYFQKAAARGYSKAQYNAGLCHEHGRG-TPRDISKAVLYYQLAASQGHSLAQYR 318
           +H  AF YF  AA  G S A    G  +  G    P+    A+ Y++ AA  G+ + Q  
Sbjct: 393 NHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSG 452

Query: 319 YARCLLRDPASSWNPERQRAVSLLKQAADSGLREAQAFLGVLFTKEPYL--DEQRAVKYL 376
                L       N +   A+   ++AA+ G  + Q  LG ++     +  D ++A+KY 
Sbjct: 453 LGMAYLYGRGVQVNYD--LALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYF 510

Query: 377 WLAANNGDSQSRYHLGICYEKGLGVQRNLGEALRCYQQSAALGNEAAQERLRALFS 432
            LA+  G   + Y+L   +  G GV R+   A+  ++     G  +  ERL   ++
Sbjct: 511 NLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWS--ERLMTAYN 564



 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 64/280 (22%), Positives = 104/280 (37%), Gaps = 55/280 (19%)

Query: 216 TGEKEQDKSKTLSLEEAVTS--IQQLFQLSVSIAFNFLGTENMKSGDHTAAFSYFQKAAA 273
           + +K Q +     L++A +    + L ++S ++ F     +N++     AA   F+K   
Sbjct: 197 SNKKSQKREAYRYLQKAASMNHTKALERVSYALLFGDYLPQNIQ-----AAREMFEKLTE 251

Query: 274 RGYSKAQYNAGLCHEHGRGTPRDISKAVLYYQLAASQG----HSLAQYRYARCL------ 323
            G  K Q   G  +  G G     +KA++YY   A  G    H +  YRY   +      
Sbjct: 252 EGSPKGQTALGFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIGVLQSC 311

Query: 324 ----------------------------LRDPASSWNPE------RQRAVSLLKQAADSG 349
                                       +R P    NP        +  +   +  A+ G
Sbjct: 312 ESALTHYRLVANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKG 371

Query: 350 LREAQAFLGVLFT---KEPYLDEQRAVKYLWLAANNGDSQSRYHLGICYEKGLGVQRNLG 406
             +AQ  LG L     +    + QRA  Y  LAAN G+S +   LG  Y +G  +     
Sbjct: 372 DVQAQVGLGQLHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSN 431

Query: 407 E-ALRCYQQSAALGNEAAQERLRALFSMGAAAPGPSDLTV 445
           E AL  ++++A +GN   Q  L   +  G       DL +
Sbjct: 432 ETALHYFKKAADMGNPVGQSGLGMAYLYGRGVQVNYDLAL 471



 Score = 37.7 bits (86), Expect = 0.025
 Identities = 35/140 (25%), Positives = 61/140 (43%), Gaps = 6/140 (4%)

Query: 277 SKAQYNAGLCHEHGRGTPRDISKAVLYYQLAASQGHSLAQYRYARCLLRDPASSWNPER- 335
           ++  Y  G+   +G        +A  Y Q AAS  H+ A  R +  LL      + P+  
Sbjct: 183 AEMMYQTGMKILNGSNKKSQKREAYRYLQKAASMNHTKALERVSYALL---FGDYLPQNI 239

Query: 336 QRAVSLLKQAADSGLREAQAFLGVLFTKEPYLD--EQRAVKYLWLAANNGDSQSRYHLGI 393
           Q A  + ++  + G  + Q  LG L+     ++  + +A+ Y    A  G+  +   LG 
Sbjct: 240 QAAREMFEKLTEEGSPKGQTALGFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMVLGY 299

Query: 394 CYEKGLGVQRNLGEALRCYQ 413
            Y  G+GV ++   AL  Y+
Sbjct: 300 RYWAGIGVLQSCESALTHYR 319


>gi|151301150 sel-1 suppressor of lin-12-like 2 [Homo sapiens]
          Length = 688

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 37/173 (21%)

Query: 260 DHTAAFSYFQKAAARGYSKAQYNAGLCHEHGRGTPRDISKAVLYYQLAASQGHSLAQYRY 319
           ++  AF YF  AA++G +   +  GL + HG+G P + ++A+ Y+Q AA +G   AQ++ 
Sbjct: 354 NNATAFKYFSMAASKGNAIGLHGLGLLYFHGKGVPLNYAEALKYFQKAAEKGWPDAQFQL 413

Query: 320 ARCLLRDPASSWNPERQRAVSLLKQAADSGLREAQAFLGVLFTKEPYLDEQRAVKYLWLA 379
                                     + SG+               + D + A KY +LA
Sbjct: 414 G---------------------FMYYSGSGI---------------WKDYKLAFKYFYLA 437

Query: 380 ANNGDSQSRYHLGICYEKGLGVQRNLGEALRCYQQSAALGNEAAQERLRALFS 432
           + +G   + Y+L   Y  G GV R+   A+  Y+    LG+  A++ L A F+
Sbjct: 438 SQSGQPLAIYYLAKMYATGTGVVRSCRTAVELYKGVCELGH-WAEKFLTAYFA 489



 Score = 50.1 bits (118), Expect = 5e-06
 Identities = 49/185 (26%), Positives = 83/185 (44%), Gaps = 14/185 (7%)

Query: 264 AFSYFQKAAARGYSKAQYNAGLCHEHGRGT--PRDISK--------AVLYYQLAASQGHS 313
           A SY++K A       + + G+  E  R T  P ++S            YY+  A +G  
Sbjct: 238 ALSYYKKVADYIADTFEKSEGVPVEKVRLTERPENLSSNSEILDWDIYQYYKFLAERGDV 297

Query: 314 LAQYRYARCLLRDPASSWNPERQRAVSLLKQAADSGLREAQAFLGVLFTKEPYLDEQR-- 371
             Q    +  L       + +  +A+    +AA +G   A AF+G ++ +      Q   
Sbjct: 298 QIQVSLGQLHLIG-RKGLDQDYYKALHYFLKAAKAGSANAMAFIGKMYLEGNAAVPQNNA 356

Query: 372 -AVKYLWLAANNGDSQSRYHLGICYEKGLGVQRNLGEALRCYQQSAALGNEAAQERLRAL 430
            A KY  +AA+ G++   + LG+ Y  G GV  N  EAL+ +Q++A  G   AQ +L  +
Sbjct: 357 TAFKYFSMAASKGNAIGLHGLGLLYFHGKGVPLNYAEALKYFQKAAEKGWPDAQFQLGFM 416

Query: 431 FSMGA 435
           +  G+
Sbjct: 417 YYSGS 421



 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 45/164 (27%), Positives = 68/164 (41%), Gaps = 7/164 (4%)

Query: 260 DHTAAFSYFQKAAARGYSKAQYNAGLCHEHGRGTPRDISKAVLYYQLAASQGHSLAQYRY 319
           ++  A  YFQKAA +G+  AQ+  G  +  G G  +D   A  Y+ LA+  G  LA Y  
Sbjct: 390 NYAEALKYFQKAAEKGWPDAQFQLGFMYYSGSGIWKDYKLAFKYFYLASQSGQPLAIYYL 449

Query: 320 ARCLLRDPASSWNPERQRAVSLLKQAADSGLREAQAFLGVLFTKEPYLDEQRAVKYLWLA 379
           A+  +    +      + AV L K   + G   A+ FL   F  +    +   V+Y  LA
Sbjct: 450 AK--MYATGTGVVRSCRTAVELYKGVCELG-HWAEKFLTAYFAYKDGDIDSSLVQYALLA 506

Query: 380 ANNGDSQSRYHLGICYEKGLGVQRNLGEALRCYQQSAALGNEAA 423
               +        I   K    + N+ E  + Y  +  L N AA
Sbjct: 507 EMGYEVAQSNSAFILESK----KANILEKEKMYPMALLLWNRAA 546



 Score = 46.2 bits (108), Expect = 7e-05
 Identities = 57/257 (22%), Positives = 111/257 (43%), Gaps = 31/257 (12%)

Query: 214 QPTGEKEQDKSKTLSLEEA-VTSIQQLFQLSVSIAFNFLGTENMKSGDHTAAFSYFQKAA 272
           Q   +K+++++  L  + A + +++ + +++ ++ F   G +N+     TAA   ++  A
Sbjct: 120 QSKSQKQKEEAYLLFAKAADMGNLKAMEKMADALLFGNFGVQNI-----TAAIQLYESLA 174

Query: 273 ARGYSKAQYNAGLCHEHGRGTPRDISKAVLYYQLAASQGHSLAQ----YRYARCLLRDPA 328
             G  KAQ   G    +G G   D +KA++YY   ++ G+ ++Q    YRY   +     
Sbjct: 175 KEGSCKAQNALGFLSSYGIGMEYDQAKALIYYTFGSAGGNMMSQMILGYRYLSGI----- 229

Query: 329 SSWNPERQRAVSLLKQAADSGLREAQAFLGVLFTKEPYLDEQRAV------------KYL 376
            +     + A+S  K+ AD      +   GV   K    +    +            +Y 
Sbjct: 230 -NVLQNCEVALSYYKKVADYIADTFEKSEGVPVEKVRLTERPENLSSNSEILDWDIYQYY 288

Query: 377 WLAANNGDSQSRYHLGICYEKG-LGVQRNLGEALRCYQQSAALGNEAAQERLRALFSMGA 435
              A  GD Q +  LG  +  G  G+ ++  +AL  + ++A  G+  A   +  ++  G 
Sbjct: 289 KFLAERGDVQIQVSLGQLHLIGRKGLDQDYYKALHYFLKAAKAGSANAMAFIGKMYLEGN 348

Query: 436 AAPGPSDLTVTGLKSFS 452
           AA   ++   T  K FS
Sbjct: 349 AAVPQNN--ATAFKYFS 363



 Score = 45.8 bits (107), Expect = 9e-05
 Identities = 51/203 (25%), Positives = 80/203 (39%), Gaps = 43/203 (21%)

Query: 260 DHTAAFSYFQKAAARGYSKAQYNAGLCHEHGRGTPR------------------------ 295
           D+  AF YF  A+  G   A Y     +  G G  R                        
Sbjct: 426 DYKLAFKYFYLASQSGQPLAIYYLAKMYATGTGVVRSCRTAVELYKGVCELGHWAEKFLT 485

Query: 296 --------DISKAVLYYQLAASQGHSLAQYRYARCLLRDPASSWNPERQRAVSLL--KQA 345
                   DI  +++ Y L A  G+ +AQ   A  L    A+    E+   ++LL   +A
Sbjct: 486 AYFAYKDGDIDSSLVQYALLAEMGYEVAQSNSAFILESKKANILEKEKMYPMALLLWNRA 545

Query: 346 ADSGLREAQAFLGVLF-----TKEPYLDEQRAVKYLWLAANN-GDSQSRYHLGICYEKGL 399
           A  G   A+  +G        TK+ Y   Q A  +  +AAN   ++Q+ ++L   YE GL
Sbjct: 546 AIQGNAFARVKIGDYHYYGYGTKKDY---QTAATHYSIAANKYHNAQAMFNLAYMYEHGL 602

Query: 400 GVQRNLGEALRCYQQSAALGNEA 422
           G+ +++  A R Y  +A    +A
Sbjct: 603 GITKDIHLARRLYDMAAQTSPDA 625


>gi|33620759 LRP2 binding protein [Homo sapiens]
          Length = 347

 Score = 53.9 bits (128), Expect = 3e-07
 Identities = 54/222 (24%), Positives = 102/222 (45%), Gaps = 16/222 (7%)

Query: 218 EKEQDKSKTLSLEEAVTSIQQLFQLSVSIAFNFLGTENMKSGDHTAAFSYFQKAAARGYS 277
           +++ D +    +++A+  +++      ++A+   G    + G +  A   F++   + + 
Sbjct: 32  KEKTDYTHANLVDKALQLLKERILKGDTLAYFLRGQLYFEEGWYEEALEQFEEIKEKDH- 90

Query: 278 KAQYNAGLCHEHGRGTPRDISKAVLYYQLA-------ASQGHSLAQYRYARCLLRDPASS 330
           +A Y  G+ +  G GT  D  K V Y +         A      A Y   R         
Sbjct: 91  QATYQLGVMYYDGLGTTLDAEKGVDYMKKILDSPCPKARHLKFAAAYNLGRAYYEGKGVK 150

Query: 331 WNPERQRAVSLLKQAADSGLREA----QAFLGVLF-TKEPYLDEQRAVKYLWLAANNGDS 385
            + E    + L+  AAD+G  +A    Q+ LG+ + TKEP  + ++A  +   A  NG+ 
Sbjct: 151 RSNEEAERLWLI--AADNGNPKASVKAQSMLGLYYSTKEPK-ELEKAFYWHSEACGNGNL 207

Query: 386 QSRYHLGICYEKGLGVQRNLGEALRCYQQSAALGNEAAQERL 427
           +S+  LG+ Y  G G++++   AL+C +++A  GN  AQ  L
Sbjct: 208 ESQGALGLMYLYGQGIRQDTEAALQCLREAAERGNVYAQGNL 249



 Score = 32.3 bits (72), Expect = 1.1
 Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 7/84 (8%)

Query: 367 LDEQRAVKYLWLAANNGDSQSR-------YHLGICYEKGLGVQRNLGEALRCYQQSAALG 419
           LD ++ V Y+    ++   ++R       Y+LG  Y +G GV+R+  EA R +  +A  G
Sbjct: 108 LDAEKGVDYMKKILDSPCPKARHLKFAAAYNLGRAYYEGKGVKRSNEEAERLWLIAADNG 167

Query: 420 NEAAQERLRALFSMGAAAPGPSDL 443
           N  A  + +++  +  +   P +L
Sbjct: 168 NPKASVKAQSMLGLYYSTKEPKEL 191


>gi|153251865 hypothetical protein LOC84226 [Homo sapiens]
          Length = 1984

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 35/118 (29%), Positives = 43/118 (36%), Gaps = 10/118 (8%)

Query: 112  PQRVEHCS-----WHSPLDRFFSSPLWHPCSSLRQHILPSPDGPAPRHTGLREPRLGQEE 166
            P R  H S     W SP  R   SP    C SL +  L SP   + R    R      E 
Sbjct: 1593 PSRKNHSSPSERSWRSPSQRNHCSPPERSCHSLSERGLHSPSQRSHRGPSQRRHHSPSER 1652

Query: 167  ASAQPRNFSHNSLRGARPQDPSE---EGPGDFGFLHASSSIESEAKPAQPQPTGEKEQ 221
            +   P   SH S    R + PS+    GP +    H S S      P+Q    G  E+
Sbjct: 1653 SHRSPSERSHRSSSERRHRSPSQRSHRGPSERS--HCSPSERRHRSPSQRSHRGPSER 1708



 Score = 33.5 bits (75), Expect = 0.48
 Identities = 33/113 (29%), Positives = 42/113 (37%), Gaps = 14/113 (12%)

Query: 111  GPQRVEHCSWHSPLDRFFSSPLW--HPCSSLRQHILPSPDGPAPRHTGLREPRLGQEEAS 168
            GP    HCS   P +R   SP    H   S R+H   SP   + R    R  R   E + 
Sbjct: 1680 GPSERSHCS---PSERRHRSPSQRSHRGPSERRH--HSPSKRSHRSPARRSHRSPSERSH 1734

Query: 169  AQPRNFSHNSLRGARPQDPSEEGPGDFGFLHASSSIESEAKPAQPQPTGEKEQ 221
              P   SH+S    R   PSE         H S S  S   P++ +     E+
Sbjct: 1735 HSPSERSHHSPSERRHHSPSERS-------HCSPSERSHCSPSERRHRSPSER 1780


>gi|199562283 retrotransposon-like 1 [Homo sapiens]
          Length = 1358

 Score = 38.5 bits (88), Expect = 0.015
 Identities = 35/146 (23%), Positives = 63/146 (43%), Gaps = 16/146 (10%)

Query: 118 CSWHSP--LDRFFSSPLWHPCSSLRQH---ILPSPDGPAPRHTGLREPRLGQEEASAQPR 172
           C++HSP  L   F  P   PC +L +H   +LP    P      +  P+   +E S QP 
Sbjct: 523 CTFHSPYCLKNCFRPP--PPCIALERHGMSLLPGLPHPYSDLADVFNPKEADDETSDQPS 580

Query: 173 NFSHNSLRGARPQDPSEEGPGDFGFLHASSSIESEAKPAQPQPTGEKEQDKSKT----LS 228
           +   + L  + P +  + G  D    H+ +  E  +  A  +P G + Q++++       
Sbjct: 581 SDGSDDLSESEPSELQQAGDSD----HSETFYECPS-TAPWEPVGARMQERARLQEEYWD 635

Query: 229 LEEAVTSIQQLFQLSVSIAFNFLGTE 254
           L++ +T+ Q   Q+   +     G E
Sbjct: 636 LQDMLTNRQDYIQMIPELFDQLHGAE 661


>gi|29570782 additional sex combs like 1 [Homo sapiens]
          Length = 1541

 Score = 37.0 bits (84), Expect = 0.043
 Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 5/87 (5%)

Query: 424  QERLRALF--SMGAAAPG--PSDLTVTGLKSFSSPSLCSLNTLLAGTSRLPHASSTGNLG 479
            Q+ +RA+   S   AAPG  P DLT +    FSSP++ S      G +    ++ TG   
Sbjct: 1243 QKEVRAMSQDSNSNAAPGKSPGDLTTSRTPRFSSPNVISFGPEQTGRALGDQSNVTGQGK 1302

Query: 480  LLCRSGHLGASLEASSRAIPPHPYPLE 506
             L  SG++ A+L+   R   P P P E
Sbjct: 1303 KLFGSGNVAATLQ-RPRPADPMPLPAE 1328


>gi|154689719 hypothetical protein LOC23231 [Homo sapiens]
          Length = 1132

 Score = 37.0 bits (84), Expect = 0.043
 Identities = 44/155 (28%), Positives = 66/155 (42%), Gaps = 13/155 (8%)

Query: 260 DHTAAFSYFQKAAARGYSKAQYNAGLCHEHG--RGTP-RDISKAVLYYQLAASQGHSLAQ 316
           ++  A  Y+ KA   G   A YN G+ H  G   G P R+ + A  Y+  AA  GH    
Sbjct: 779 NYAKAAKYWLKAEEMGNPDASYNLGVLHLDGIFPGVPGRNQTLAGEYFHKAAQGGHMEGT 838

Query: 317 YRYARCLLRDPASSWNPERQRAVSLLKQAADSGLREAQAFLGVLFTK--EPYLDE--QRA 372
              +   +     ++  + ++AV   K  A     E   +LG +  K    YL+     A
Sbjct: 839 LWCSLYYITGNLETFPRDPEKAVVWAKHVA-----EKNGYLGHVIRKGLNAYLEGSWHEA 893

Query: 373 VKYLWLAANNGDSQSRYHLG-ICYEKGLGVQRNLG 406
           + Y  LAA  G   S+ +L  IC E+    +R LG
Sbjct: 894 LLYYVLAAETGIEVSQTNLAHICEERPDLARRYLG 928


>gi|169166055 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 124

 Score = 36.6 bits (83), Expect = 0.056
 Identities = 26/61 (42%), Positives = 28/61 (45%), Gaps = 6/61 (9%)

Query: 2   WRLPGLLGRALPRTLGPSLWRVTPKSTSPDGPQTTSSTLLVPVPNLDRSGP-HGP-GTSG 59
           WR+P    R LP T  P LWR T  S     P  T    + P P   RS P HGP G S 
Sbjct: 58  WRVPTQGQRLLPDTPSPGLWRCTFGSL----PHATFHHAMPPTPPPSRSTPAHGPFGCSS 113

Query: 60  G 60
           G
Sbjct: 114 G 114


>gi|239742084 PREDICTED: hypothetical protein XP_002342433 [Homo
           sapiens]
          Length = 124

 Score = 36.6 bits (83), Expect = 0.056
 Identities = 26/61 (42%), Positives = 28/61 (45%), Gaps = 6/61 (9%)

Query: 2   WRLPGLLGRALPRTLGPSLWRVTPKSTSPDGPQTTSSTLLVPVPNLDRSGP-HGP-GTSG 59
           WR+P    R LP T  P LWR T  S     P  T    + P P   RS P HGP G S 
Sbjct: 58  WRVPTQGQRLLPDTPSPGLWRCTFGSL----PHATFHHAMPPTPPPSRSTPAHGPFGCSS 113

Query: 60  G 60
           G
Sbjct: 114 G 114


>gi|14150078 hypothetical protein LOC84273 [Homo sapiens]
          Length = 698

 Score = 35.8 bits (81), Expect = 0.096
 Identities = 30/83 (36%), Positives = 41/83 (49%), Gaps = 5/83 (6%)

Query: 151 APRHTGLREPRLGQEEASAQPRNFSHNSLRGAR-PQDPSE-EGPGDFGFLHASSSIESEA 208
           A RH GLREP L +  A+A   +F H+S  G   P DP + EG G+ G +          
Sbjct: 22  AARH-GLREPLLERRCAAAS--SFQHSSSLGRELPYDPVDTEGFGEGGDMQERFLFPEYI 78

Query: 209 KPAQPQPTGEKEQDKSKTLSLEE 231
              +PQPT EK+  + +    EE
Sbjct: 79  LDPEPQPTREKQLQELQQQQEEE 101


>gi|29789008 Huntingtin interacting protein C isoform 2 [Homo
           sapiens]
          Length = 858

 Score = 35.4 bits (80), Expect = 0.13
 Identities = 33/102 (32%), Positives = 43/102 (42%), Gaps = 21/102 (20%)

Query: 145 PSPDGPAPRHTGLREPRLGQEEASAQPRNFSHNSLRGARPQDPS-----EEGPGDFGFLH 199
           P P GP P  TGL EP  G  E          + L   +P +       EEGP   G  H
Sbjct: 197 PVPPGPTPVPTGLLEPEPGGSE--------DCDVLEATQPLEQGFLQQLEEGPSSSG-QH 247

Query: 200 ASSSIESEAKPAQPQPTG------EKEQDKSKTLSLEEAVTS 235
                E E+KP +P+ +G      EK +   K L  ++AV S
Sbjct: 248 QPQQEEEESKP-EPERSGLSWSNREKAKQAFKELLRDKAVPS 288


>gi|72534686 Huntingtin interacting protein C isoform 1 [Homo
           sapiens]
          Length = 871

 Score = 35.4 bits (80), Expect = 0.13
 Identities = 33/102 (32%), Positives = 43/102 (42%), Gaps = 21/102 (20%)

Query: 145 PSPDGPAPRHTGLREPRLGQEEASAQPRNFSHNSLRGARPQDPS-----EEGPGDFGFLH 199
           P P GP P  TGL EP  G  E          + L   +P +       EEGP   G  H
Sbjct: 203 PVPPGPTPVPTGLLEPEPGGSE--------DCDVLEATQPLEQGFLQQLEEGPSSSG-QH 253

Query: 200 ASSSIESEAKPAQPQPTG------EKEQDKSKTLSLEEAVTS 235
                E E+KP +P+ +G      EK +   K L  ++AV S
Sbjct: 254 QPQQEEEESKP-EPERSGLSWSNREKAKQAFKELLRDKAVPS 294


>gi|57232759 intestine-specific homeobox [Homo sapiens]
          Length = 245

 Score = 33.9 bits (76), Expect = 0.37
 Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 6/62 (9%)

Query: 183 RPQDPSEEGPGDFGFLHASSSIESEAKPAQPQP-TGEKEQDKSKTLSLEEAVTSIQQLFQ 241
           RP+ P EEGPG+     A++S     KP + QP  G K + + +T    E +  ++++F 
Sbjct: 48  RPEGPGEEGPGE-----AAASGSGLEKPPKDQPQEGRKSKRRVRTTFTTEQLHELEKIFH 102

Query: 242 LS 243
            +
Sbjct: 103 FT 104


>gi|51479177 iroquois homeobox protein 1 [Homo sapiens]
          Length = 480

 Score = 33.1 bits (74), Expect = 0.62
 Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 6/47 (12%)

Query: 18  PSLWRVTPKSTSPDGPQTTSSTLLVPVPNLDRSGPHGPGTSGGPRSH 64
           P +W +   +TSPDG    S     P P     G HGP ++G P  H
Sbjct: 314 PKIWSLAETATSPDGAPKAS-----PPPPAGHPGAHGP-SAGAPLQH 354


>gi|4506509 regulator of G-protein signalling 12 isoform 2 [Homo
           sapiens]
          Length = 1376

 Score = 32.7 bits (73), Expect = 0.81
 Identities = 42/182 (23%), Positives = 64/182 (35%), Gaps = 23/182 (12%)

Query: 126 RFFSSPLWHPC--SSLRQHILPS----PDGPAPRHTGLREPRLGQEEASAQ-PRNFSHNS 178
           RF  SPL+  C  + +    LP     P  PA +H+      LG + +S   P+  S  S
Sbjct: 821 RFLKSPLYQECILAEVEGRALPDSQQVPSSPASKHS------LGSDHSSVSTPKKLSGKS 874

Query: 179 LRGAR------PQDPSEEGPGDFGFLHASSSIESEAKPAQPQPTGEKEQDKSKTLSLEEA 232
             G         +D  ++  G F     + S     K  +     +     +  L   E+
Sbjct: 875 KSGRSLNEELGDEDSEKKRKGAFFSWSRTRSTGRSQKKREHGDHADDALHANGGLCRRES 934

Query: 233 VTSIQQLFQLSVSIAFNFLGTENMKSGDHTAAF----SYFQKAAARGYSKAQYNAGLCHE 288
             S+     L +S A   L  E  K+  H        +    A   G+S     +GLC  
Sbjct: 935 QGSVSSAGSLDLSEACRTLAPEKDKATKHCCIHLPDGTSCVVAVKAGFSIKDILSGLCER 994

Query: 289 HG 290
           HG
Sbjct: 995 HG 996


>gi|38327601 regulator of G-protein signalling 12 isoform 1 [Homo
           sapiens]
          Length = 1447

 Score = 32.7 bits (73), Expect = 0.81
 Identities = 42/182 (23%), Positives = 64/182 (35%), Gaps = 23/182 (12%)

Query: 126 RFFSSPLWHPC--SSLRQHILPS----PDGPAPRHTGLREPRLGQEEASAQ-PRNFSHNS 178
           RF  SPL+  C  + +    LP     P  PA +H+      LG + +S   P+  S  S
Sbjct: 821 RFLKSPLYQECILAEVEGRALPDSQQVPSSPASKHS------LGSDHSSVSTPKKLSGKS 874

Query: 179 LRGAR------PQDPSEEGPGDFGFLHASSSIESEAKPAQPQPTGEKEQDKSKTLSLEEA 232
             G         +D  ++  G F     + S     K  +     +     +  L   E+
Sbjct: 875 KSGRSLNEELGDEDSEKKRKGAFFSWSRTRSTGRSQKKREHGDHADDALHANGGLCRRES 934

Query: 233 VTSIQQLFQLSVSIAFNFLGTENMKSGDHTAAF----SYFQKAAARGYSKAQYNAGLCHE 288
             S+     L +S A   L  E  K+  H        +    A   G+S     +GLC  
Sbjct: 935 QGSVSSAGSLDLSEACRTLAPEKDKATKHCCIHLPDGTSCVVAVKAGFSIKDILSGLCER 994

Query: 289 HG 290
           HG
Sbjct: 995 HG 996


>gi|38327599 regulator of G-protein signalling 12 isoform 3 [Homo
           sapiens]
          Length = 799

 Score = 32.7 bits (73), Expect = 0.81
 Identities = 42/182 (23%), Positives = 64/182 (35%), Gaps = 23/182 (12%)

Query: 126 RFFSSPLWHPC--SSLRQHILPS----PDGPAPRHTGLREPRLGQEEASAQ-PRNFSHNS 178
           RF  SPL+  C  + +    LP     P  PA +H+      LG + +S   P+  S  S
Sbjct: 173 RFLKSPLYQECILAEVEGRALPDSQQVPSSPASKHS------LGSDHSSVSTPKKLSGKS 226

Query: 179 LRGAR------PQDPSEEGPGDFGFLHASSSIESEAKPAQPQPTGEKEQDKSKTLSLEEA 232
             G         +D  ++  G F     + S     K  +     +     +  L   E+
Sbjct: 227 KSGRSLNEELGDEDSEKKRKGAFFSWSRTRSTGRSQKKREHGDHADDALHANGGLCRRES 286

Query: 233 VTSIQQLFQLSVSIAFNFLGTENMKSGDHTAAF----SYFQKAAARGYSKAQYNAGLCHE 288
             S+     L +S A   L  E  K+  H        +    A   G+S     +GLC  
Sbjct: 287 QGSVSSAGSLDLSEACRTLAPEKDKATKHCCIHLPDGTSCVVAVKAGFSIKDILSGLCER 346

Query: 289 HG 290
           HG
Sbjct: 347 HG 348


>gi|150170670 piccolo isoform 2 [Homo sapiens]
          Length = 4935

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 4/88 (4%)

Query: 144 LPSPDGPAPRHTGLREPRLGQEEASAQPRNFSHNSLRGARPQ-DPSEEGPGDFGFLHASS 202
           LP P  P P+  G  +P   Q+  SA+P +    S +    Q  P++  P   G     S
Sbjct: 473 LPGPAKPPPQQPGPAKPP-PQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQPGSTKPPS 531

Query: 203 SIESEAKPA--QPQPTGEKEQDKSKTLS 228
                AKP+  QP P     Q  +K +S
Sbjct: 532 QQPGSAKPSAQQPSPAKPSAQQSTKPVS 559


>gi|150378539 piccolo isoform 1 [Homo sapiens]
          Length = 5142

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 4/88 (4%)

Query: 144 LPSPDGPAPRHTGLREPRLGQEEASAQPRNFSHNSLRGARPQ-DPSEEGPGDFGFLHASS 202
           LP P  P P+  G  +P   Q+  SA+P +    S +    Q  P++  P   G     S
Sbjct: 473 LPGPAKPPPQQPGPAKPP-PQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQPGSTKPPS 531

Query: 203 SIESEAKPA--QPQPTGEKEQDKSKTLS 228
                AKP+  QP P     Q  +K +S
Sbjct: 532 QQPGSAKPSAQQPSPAKPSAQQSTKPVS 559


>gi|38348206 Ras and Rab interactor-like [Homo sapiens]
          Length = 452

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 44/170 (25%), Positives = 61/170 (35%), Gaps = 33/170 (19%)

Query: 39  TLLVPVPNLDRSGPHGPGTSGGPRSHGWKDAFQWMSSRVSPNTLWDAISWGTLAVLALQL 98
           TLL+P P L   GP    T         +D    + S V+   L     WG         
Sbjct: 21  TLLLPPPTL---GPRDEHTDPVQIGRVQQDTPGKVLSIVNQLYLETHRGWG--------- 68

Query: 99  ARQIHFQASLPAGPQRVEHCSWHSPLDRFFSSPLWHPCSSLRQHILPSPDGPAPRHTGLR 158
            R+   Q + P   QR      H P  R   +P  H  S ++  + P  D P P    L 
Sbjct: 69  -REQTPQETEPEAAQR------HDPAPR---NPAPHGVSWVKGPLSPEVDHPGPALASLL 118

Query: 159 EPRLGQEEASAQPRNFSHNSLRGARPQDPSEEGPGDFGFLHASSSIESEA 208
           E    +EE   + +          R  DP EEGP D   +H  S + + +
Sbjct: 119 E----EEEEDLEGKE-------EGREDDPEEEGPEDVLTIHVQSLVRARS 157


>gi|208431781 cyclic nucleotide gated channel beta 1 isoform b [Homo
           sapiens]
          Length = 299

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 27/100 (27%), Positives = 40/100 (40%), Gaps = 11/100 (11%)

Query: 141 QHILPSPDGPAPRHTGLREPRLGQEEASAQPRNFSHNSLRGARPQDPSEEGPGDFGFLHA 200
           Q +LP P G  PR T ++E    +EE   +P   +        P+   EE   +   +  
Sbjct: 6   QRVLPQPPG-TPRKTKMQE----EEEVEPEPEMEAE-----VEPEPNPEEAETESESMPP 55

Query: 201 SSSI-ESEAKPAQPQPTGEKEQDKSKTLSLEEAVTSIQQL 239
             S  E E   A P P   KE   + T+SL      I ++
Sbjct: 56  EESFKEEEVAVADPSPQETKEAALTSTISLRAQGAEISEM 95


>gi|114205399 cyclic nucleotide gated channel beta 1 isoform a [Homo
           sapiens]
          Length = 1251

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 27/100 (27%), Positives = 40/100 (40%), Gaps = 11/100 (11%)

Query: 141 QHILPSPDGPAPRHTGLREPRLGQEEASAQPRNFSHNSLRGARPQDPSEEGPGDFGFLHA 200
           Q +LP P G  PR T ++E    +EE   +P   +        P+   EE   +   +  
Sbjct: 6   QRVLPQPPG-TPRKTKMQE----EEEVEPEPEMEAE-----VEPEPNPEEAETESESMPP 55

Query: 201 SSSI-ESEAKPAQPQPTGEKEQDKSKTLSLEEAVTSIQQL 239
             S  E E   A P P   KE   + T+SL      I ++
Sbjct: 56  EESFKEEEVAVADPSPQETKEAALTSTISLRAQGAEISEM 95


>gi|71274152 hypothetical protein LOC388939 [Homo sapiens]
          Length = 1288

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 40/150 (26%), Positives = 49/150 (32%), Gaps = 23/150 (15%)

Query: 2    WRLPGLLGRALPRTLGPSLWRVTPKSTSPDGPQTTSSTLLVPVPNLDRSGPHGPGTSGGP 61
            W  P L     P  L PS    +       GP +  S+     P LD S P  P TS  P
Sbjct: 877  WASPKLRASVSPLDLLPSKSTASLTKPHSTGPGSGRSSCQPRKPALDLSSP--PATSQSP 934

Query: 62   RSHG--WKDAFQWMSSRVSPNTLWDAISWGTLAVLALQLARQIHFQASLPAGPQRVEHCS 119
               G  W  A +  S    P     AI+W                 +  P+G  R    S
Sbjct: 935  EVKGGTWSQAEKATSLYRQPR---KAIAW---------------HHSGPPSGQNRTSESS 976

Query: 120  WHSP-LDRFFSSPLWHPCSSLRQHILPSPD 148
               P   R  S P+    S  R H +P  D
Sbjct: 977  LARPRQSRERSPPVGRKASPTRTHWVPQAD 1006


>gi|71274109 nuclear factor of kappa light polypeptide gene enhancer
           in B-cells inhibitor, epsilon [Homo sapiens]
          Length = 500

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 28/101 (27%), Positives = 38/101 (37%), Gaps = 10/101 (9%)

Query: 135 PCSSLRQHILPSP--DGPAP-RHTGLREPRLGQEEASAQPRNFSHNSLRGARPQDPSEEG 191
           P  + R+ + P P   GP P R  G+ E R G +EA     +    SLR  R    S   
Sbjct: 115 PGKAARRSLEPDPAQTGPRPARAAGMSEARKGPDEAEESQYDSGIESLRSLRSLPESTSA 174

Query: 192 PGDFGFLHASSSIESEAKPAQPQPTGEKEQDKSKTLSLEEA 232
           P       AS   +   +P    P   KE  + +    E A
Sbjct: 175 P-------ASGPSDGSPQPCTHPPGPVKEPQEKEDADGERA 208


>gi|14790128 caspase 9 isoform beta preproprotein [Homo sapiens]
          Length = 266

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 7/84 (8%)

Query: 183 RPQDPSEEGPGDF-----GFLHASSSIESEAKPAQPQPTGEKEQDKSKTLSLEEAVTSIQ 237
           RP D    G GD      GF  AS+S E E+  + P+P     Q+  +T    +A++S+ 
Sbjct: 127 RPVDIGSGGFGDVEQKDHGFEVASTSPEDESPGSNPEPDATPFQEGLRTFDQLDAISSLP 186

Query: 238 QLFQLSVSIAF--NFLGTENMKSG 259
               + VS +    F+   + KSG
Sbjct: 187 TPSDIFVSYSTFPGFVSWRDPKSG 210


>gi|169173182 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 255

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 30/110 (27%), Positives = 42/110 (38%), Gaps = 4/110 (3%)

Query: 108 LPAGPQRVEHCSWHSPLD--RFFSSPLWHPCSSLRQHILPSPDGP-APRHTGLREPRLGQ 164
           LPA P +  +     P D  +   +PL  P      H  P+ +GP      G R P  G+
Sbjct: 118 LPAHPAQTTNPELELPADPAQPDPAPLSRPAPPRPAHQSPAEEGPRGAAGGGPRTPPAGR 177

Query: 165 EEASAQPRNFSHNSLRGARPQDPSEEGPGDFGFLHASSSIESEAKPAQPQ 214
            +  + PR     S   A P   S  GP   G    S    +E +  +PQ
Sbjct: 178 TQGQSGPRESPRASPGSAAPAMASVRGPARDGATR-SEPHATEIRTLEPQ 226


>gi|155029550 chromosome 9 open reading frame 79 [Homo sapiens]
          Length = 1445

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 24/100 (24%), Positives = 39/100 (39%), Gaps = 8/100 (8%)

Query: 146  SPDGPAPRHTGLREPRLGQEEASAQPRNFSHNSLRGARPQDPSEEGPGDFGFLHASSSIE 205
            SP    P     + P+  Q+      +  +H   R    Q    +GP        +S   
Sbjct: 1177 SPGQQEPGSPKAKAPQKSQKTLGCADKGEAHRRPRTGE-QGHRSKGP-------RTSEAS 1228

Query: 206  SEAKPAQPQPTGEKEQDKSKTLSLEEAVTSIQQLFQLSVS 245
              + PAQ +  G+K++ K   L LE+  T  +  FQ  +S
Sbjct: 1229 GRSHPAQAREIGDKQERKYNQLQLEKGQTPPESHFQRKIS 1268


>gi|21071016 epidermal growth factor receptor pathway substrate
           8-like protein 3 isoform b [Homo sapiens]
          Length = 593

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 35/132 (26%), Positives = 52/132 (39%), Gaps = 31/132 (23%)

Query: 131 PLWHPCSSLRQHILPSPDGPAPRHTGLREPRLGQEEASAQPRNFSHNSLRGARPQDPSEE 190
           P   P     +H LP    P PRHT  REP          PR       R + P+DP  +
Sbjct: 189 PPEQPHQRTLEHSLPPSPRPLPRHTSAREP---SAFTLPPPR-------RSSSPEDPERD 238

Query: 191 GPGDFGFLHASSSIE--------SEAKPAQPQPTGEKEQDKSKTLSLEEAVTSIQQL--F 240
              +    H    IE        ++AK ++ +  G+K +D+         +T  Q +  F
Sbjct: 239 ---EEVLNHVLRDIELFMGKLEKAQAKTSRKKKFGKKNKDQG-------GLTQAQYIDCF 288

Query: 241 QLSVSIAFNFLG 252
           Q  +  +FN LG
Sbjct: 289 Q-KIKHSFNLLG 299


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.131    0.404 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,171,105
Number of Sequences: 37866
Number of extensions: 1228355
Number of successful extensions: 4632
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 101
Number of HSP's that attempted gapping in prelim test: 4529
Number of HSP's gapped (non-prelim): 180
length of query: 515
length of database: 18,247,518
effective HSP length: 107
effective length of query: 408
effective length of database: 14,195,856
effective search space: 5791909248
effective search space used: 5791909248
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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